ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128j22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109147:Os07g0572600 | 870 | 0.0 | 2 | AK072023:Os07g0572600 | 870 | 0.0 | 3 | L27821:Os06g0494100 | 32 | 2.2 | 4 | AK121177:Os06g0494100 | 32 | 2.2 | 5 | AK069883:Os06g0494100 | 32 | 2.2 | 6 | AK058379:Os03g0249900 | 32 | 2.2 | 7 | AK100788:Os04g0423400 | 31 | 3.7 | 8 | AK107475:Os12g0138600 | 30 | 6.3 | 9 | Os04g0552000:Os04g0552000 | 30 | 8.3 |
|---|
>AK109147:Os07g0572600 | Length = 557 Score = 870 bits (2247), Expect = 0.0 Identities = 439/563 (77%), Positives = 475/563 (84%), Gaps = 4/563 (0%) Frame = +1 Query: 136 MDREPSVSDEDDDLETLVPQNHTKXXXXXXXXXXXXXXXXXXPALPSSATSLGRVLWSRR 315 MDR+PSVSDEDDDLETLVPQNH K A+P SA SLGRVLWSRR Sbjct: 1 MDRDPSVSDEDDDLETLVPQNHVKPPSSSFHVAGLRA------AVPPSAASLGRVLWSRR 54 Query: 316 YLLICVCLPVLFIILFFSLGGASSL--PASIRXXXXXXXXXXXXX-RMREAELHALYLLR 486 YLL+ V LPVLF++LF SLGGASSL PASIR RMR+AEL ALYLLR Sbjct: 55 YLLLFVALPVLFLVLFVSLGGASSLRLPASIRLPSAAAPAADPAASRMRDAELRALYLLR 114 Query: 487 SQRCGLLSLFNRTAAPEPTNSSTAAPVXXXXXXXXXXXXIKINREIQEALLSTHHSGA-G 663 SQR GLL+LFNRTAAP +SS + V IKINREIQ ALLS H +GA G Sbjct: 115 SQRSGLLALFNRTAAPTNGSSSGSNAVSYADLHDALLGQIKINREIQAALLSAHRTGAAG 174 Query: 664 NATEDALDLDLPGPGCRRRELPYNRRTIEWNPKKNRYLFAICLSGQMSNHLICLEKHTFF 843 NATED LDLDLP GCRRRELP NRRTIEWNPKK+R+LFAIC+SGQMSNHLICLEKH FF Sbjct: 175 NATEDGLDLDLPADGCRRRELPSNRRTIEWNPKKDRFLFAICVSGQMSNHLICLEKHMFF 234 Query: 844 AALLGRILVVPSQKVDYQYDRVLDINHINECIGRKVVITYEEFVDKRKKVSIDQFICYVG 1023 AALLGRILVVPSQK+DYQYDRVLDINHIN+CIGRKVVITYEEF +KRKKVSIDQFICY Sbjct: 235 AALLGRILVVPSQKLDYQYDRVLDINHINDCIGRKVVITYEEFTEKRKKVSIDQFICYAA 294 Query: 1024 SPPCYMDEDHIKKLKSVGISMGKIEAAWPEDAKLKEPKKRYAADITAKFTTDAEVLAVGE 1203 SPPC++DEDH+KKLK +GIS+GKI+AAWPEDAKLKEPKKR+ DI KFTTDAEVLA+G+ Sbjct: 295 SPPCFIDEDHVKKLKGLGISLGKIQAAWPEDAKLKEPKKRFVEDIMPKFTTDAEVLAIGD 354 Query: 1204 LFYADAEEEWMMQPGGPLAHKCRTLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK 1383 +FYAD EEEW+MQPGGPLAHKC TLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK Sbjct: 355 MFYADVEEEWVMQPGGPLAHKCNTLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK 414 Query: 1384 FCNVKKESCFFPIPQAAGCILRIIEKANAPVIYLSTDAAGSETNLLQSLIVFNDRQVPLV 1563 FCNVKKESCFFPIPQAA CILRI+EKANAPVIYLSTDAA SET+LLQSL+VFNDRQVPLV Sbjct: 415 FCNVKKESCFFPIPQAAECILRIVEKANAPVIYLSTDAAESETSLLQSLVVFNDRQVPLV 474 Query: 1564 RRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRGW 1743 +RPEH SEKWDALLYR HMGGD+QVEAMLDKTICALSNVFIG+SGSTFTEDI RLRRGW Sbjct: 475 KRPEHHNSEKWDALLYRNHMGGDNQVEAMLDKTICALSNVFIGASGSTFTEDILRLRRGW 534 Query: 1744 GSMSYCDEYLCQGEPPNYIAELE 1812 GS S+CDEYLCQGE PN+IAEL+ Sbjct: 535 GSASHCDEYLCQGELPNFIAELD 557
>AK072023:Os07g0572600 | Length = 557 Score = 870 bits (2247), Expect = 0.0 Identities = 439/563 (77%), Positives = 475/563 (84%), Gaps = 4/563 (0%) Frame = +1 Query: 136 MDREPSVSDEDDDLETLVPQNHTKXXXXXXXXXXXXXXXXXXPALPSSATSLGRVLWSRR 315 MDR+PSVSDEDDDLETLVPQNH K A+P SA SLGRVLWSRR Sbjct: 1 MDRDPSVSDEDDDLETLVPQNHVKPPSSSFHVAGLRA------AVPPSAASLGRVLWSRR 54 Query: 316 YLLICVCLPVLFIILFFSLGGASSL--PASIRXXXXXXXXXXXXX-RMREAELHALYLLR 486 YLL+ V LPVLF++LF SLGGASSL PASIR RMR+AEL ALYLLR Sbjct: 55 YLLLFVALPVLFLVLFVSLGGASSLRLPASIRLPSAAAPAADPAASRMRDAELRALYLLR 114 Query: 487 SQRCGLLSLFNRTAAPEPTNSSTAAPVXXXXXXXXXXXXIKINREIQEALLSTHHSGA-G 663 SQR GLL+LFNRTAAP +SS + V IKINREIQ ALLS H +GA G Sbjct: 115 SQRSGLLALFNRTAAPTNGSSSGSNAVSYADLHDALLGQIKINREIQAALLSAHRTGAAG 174 Query: 664 NATEDALDLDLPGPGCRRRELPYNRRTIEWNPKKNRYLFAICLSGQMSNHLICLEKHTFF 843 NATED LDLDLP GCRRRELP NRRTIEWNPKK+R+LFAIC+SGQMSNHLICLEKH FF Sbjct: 175 NATEDGLDLDLPADGCRRRELPSNRRTIEWNPKKDRFLFAICVSGQMSNHLICLEKHMFF 234 Query: 844 AALLGRILVVPSQKVDYQYDRVLDINHINECIGRKVVITYEEFVDKRKKVSIDQFICYVG 1023 AALLGRILVVPSQK+DYQYDRVLDINHIN+CIGRKVVITYEEF +KRKKVSIDQFICY Sbjct: 235 AALLGRILVVPSQKLDYQYDRVLDINHINDCIGRKVVITYEEFTEKRKKVSIDQFICYAA 294 Query: 1024 SPPCYMDEDHIKKLKSVGISMGKIEAAWPEDAKLKEPKKRYAADITAKFTTDAEVLAVGE 1203 SPPC++DEDH+KKLK +GIS+GKI+AAWPEDAKLKEPKKR+ DI KFTTDAEVLA+G+ Sbjct: 295 SPPCFIDEDHVKKLKGLGISLGKIQAAWPEDAKLKEPKKRFVEDIMPKFTTDAEVLAIGD 354 Query: 1204 LFYADAEEEWMMQPGGPLAHKCRTLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK 1383 +FYAD EEEW+MQPGGPLAHKC TLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK Sbjct: 355 MFYADVEEEWVMQPGGPLAHKCNTLIQPSRLIMLTAQRFVQTFLGGNYIALHFRRHGFLK 414 Query: 1384 FCNVKKESCFFPIPQAAGCILRIIEKANAPVIYLSTDAAGSETNLLQSLIVFNDRQVPLV 1563 FCNVKKESCFFPIPQAA CILRI+EKANAPVIYLSTDAA SET+LLQSL+VFNDRQVPLV Sbjct: 415 FCNVKKESCFFPIPQAAECILRIVEKANAPVIYLSTDAAESETSLLQSLVVFNDRQVPLV 474 Query: 1564 RRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRGW 1743 +RPEH SEKWDALLYR HMGGD+QVEAMLDKTICALSNVFIG+SGSTFTEDI RLRRGW Sbjct: 475 KRPEHHNSEKWDALLYRNHMGGDNQVEAMLDKTICALSNVFIGASGSTFTEDILRLRRGW 534 Query: 1744 GSMSYCDEYLCQGEPPNYIAELE 1812 GS S+CDEYLCQGE PN+IAEL+ Sbjct: 535 GSASHCDEYLCQGELPNFIAELD 557
>L27821:Os06g0494100 | Length = 825 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Frame = +2 Query: 1736 GAGDRCPTATSTSARVSHPTT*QS*SEKIVPMVER-----FIAAFFFPLRADDIHISCKL 1900 G G +CP A + A + T S + P+V+ ++ FFP A CK Sbjct: 314 GTGCQCPLALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKS 373 Query: 1901 VCTTKCKRVVI 1933 CT C V + Sbjct: 374 ACTGNCSCVAV 384
>AK121177:Os06g0494100 | Length = 845 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Frame = +2 Query: 1736 GAGDRCPTATSTSARVSHPTT*QS*SEKIVPMVER-----FIAAFFFPLRADDIHISCKL 1900 G G +CP A + A + T S + P+V+ ++ FFP A CK Sbjct: 334 GTGCQCPLALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKS 393 Query: 1901 VCTTKCKRVVI 1933 CT C V + Sbjct: 394 ACTGNCSCVAV 404
>AK069883:Os06g0494100 | Length = 845 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Frame = +2 Query: 1736 GAGDRCPTATSTSARVSHPTT*QS*SEKIVPMVER-----FIAAFFFPLRADDIHISCKL 1900 G G +CP A + A + T S + P+V+ ++ FFP A CK Sbjct: 334 GTGCQCPLALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKS 393 Query: 1901 VCTTKCKRVVI 1933 CT C V + Sbjct: 394 ACTGNCSCVAV 404
>AK058379:Os03g0249900 | Length = 318 Score = 31.6 bits (70), Expect = 2.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 118 SLSSAAMDREPSVSDEDDDLETLVPQNHTK 207 S +AA+ R P V +EDDD + VP +H + Sbjct: 11 SAGAAAVQRRPKVVEEDDDEDDFVPLSHAR 40
>AK100788:Os04g0423400 | Length = 174 Score = 30.8 bits (68), Expect = 3.7 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 13/87 (14%) Frame = -1 Query: 922 G*YQAPGRTDNLPSGWEPP-------------RSGQEVRRRTCASPSKSSGSTFAQRDRW 782 G Y PG TD+ SG+ R Q+VR RT + + ++GS A R R Sbjct: 46 GGYNKPGGTDDYDSGYNKSARRRRRRLRPHRRRRVQQVRHRTTTTAATTTGSRRAWRRRR 105 Query: 781 RTGTDSSWGSTLSSAGCTAIPFSCTRG 701 R G S ++ ++ A + RG Sbjct: 106 RWGAAGSRSTSTTTRRRPAPAPAAARG 132
>AK107475:Os12g0138600 | Length = 176 Score = 30.0 bits (66), Expect = 6.3 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = -1 Query: 880 GWEPPRSGQEVRRRTCASPSKSSGSTFAQRDRWRTGTDSSWGSTLSSAGCTAI-PFSCTR 704 G P + EVR R+ +S S W TD+ G T+S+A C A+ P R Sbjct: 94 GTAPLKRNSEVRLRSTSSGVTPSSVLEFGSAWWSRSTDTMSGETISAARCRAVLPVGPAR 153 Query: 703 GLADQDP 683 L P Sbjct: 154 ELTSAAP 160
>Os04g0552000:Os04g0552000 | Length = 431 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Frame = -1 Query: 1684 KRLTKRKLSCRAWPRPDH-LHP 1622 +R +R+LSC+A P PDH LHP Sbjct: 275 RRRRRRRLSCQAPPSPDHRLHP 296 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 54,163,538 Number of extensions: 1287881 Number of successful extensions: 4135 Number of sequences better than 10.0: 9 Number of HSP's gapped: 4121 Number of HSP's successfully gapped: 9 Length of query: 670 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 563 Effective length of database: 11,115,468 Effective search space: 6258008484 Effective search space used: 6258008484 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
