ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128j22 |
|---|---|
| Clone Library Name | barley_pub |
>Q8WR51:OFUT2_CAEEL GDP-fucose protein O-fucosyltransferase 2 precursor - Caenorhabditis| elegans Length = 424 Score = 47.0 bits (110), Expect = 3e-04 Identities = 38/136 (27%), Positives = 68/136 (50%) Frame = +1 Query: 1306 TAQRFVQTFLGGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAGCILRIIEKANAPVIYL 1485 T ++ +T +GG Y+ +H+RR FL + + IP A + + +K + IYL Sbjct: 271 TKEKPRRTAIGGPYLGIHWRRRDFL----YARRAQLPTIPGTAKILQDLCKKLDLQKIYL 326 Query: 1486 STDAAGSETNLLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTI 1665 +TDA E + L++L+ + ++ + R + + D Q+ A++D+ + Sbjct: 327 ATDAPDQEVDELKALL---NGELEVYRFTDTQKLN-------------DGQI-AIIDQYL 369 Query: 1666 CALSNVFIGSSGSTFT 1713 CA + FIGS STFT Sbjct: 370 CAHAAYFIGSYESTFT 385
>Q9W589:OFUT2_DROME GDP-fucose protein O-fucosyltransferase 2 precursor - Drosophila| melanogaster (Fruit fly) Length = 490 Score = 42.4 bits (98), Expect = 0.007 Identities = 35/133 (26%), Positives = 61/133 (45%) Frame = +1 Query: 1336 GGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAGCILRIIEKANAPVIYLSTDAAGSETN 1515 GG+Y+ H RR F++ +++ + AA + +++ N ++L+TDA E Sbjct: 329 GGDYLCAHLRRGDFVR----SRDATTPTLKAAAQQVKQLLRGFNMTTVFLATDATPYELM 384 Query: 1516 LLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGS 1695 L+ L + R V + E D GG A++D+ +CA + F+G+ Sbjct: 385 ELKELF-YRFRLVHFAPESNVQRRELKD--------GG----VAVVDQLVCAYARYFVGT 431 Query: 1696 SGSTFTEDIFRLR 1734 STFT I+ R Sbjct: 432 YESTFTYRIYEER 444
>Q6EV56:OFUT2_PANTR GDP-fucose protein O-fucosyltransferase 2 precursor - Pan troglodytes| (Chimpanzee) Length = 429 Score = 37.7 bits (86), Expect = 0.18 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%) Frame = +1 Query: 1333 LGGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAGCILRI---IEKANAPVIYLSTDAAG 1503 LGG Y+ +H RR F+ +++ +P G + +I ++ ++++TDA Sbjct: 284 LGGPYLGVHLRRKDFI--WGHRQD-----VPSLEGAVRKIRSLMKTHRLDKVFVATDAVR 336 Query: 1504 SETNLLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNV 1683 E L+ L+ R P W+ L K G A++D+ ICA + Sbjct: 337 KEYEELKKLLPEMVRFEPT-----------WEELELYKDGG-----VAIIDQWICAHARF 380 Query: 1684 FIGSSGSTFT 1713 FIG+S STF+ Sbjct: 381 FIGTSVSTFS 390
>Q8VHI3:OFUT2_MOUSE GDP-fucose protein O-fucosyltransferase 2 precursor - Mus musculus| (Mouse) Length = 429 Score = 37.7 bits (86), Expect = 0.18 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 3/130 (2%) Frame = +1 Query: 1333 LGGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAGCILRI---IEKANAPVIYLSTDAAG 1503 LGG Y+ +H RR F+ +E +P G + +I ++ ++++TDA Sbjct: 284 LGGPYLGVHLRRKDFIWG---HRED----VPSLEGAVKKIRSLMKTHQLDKVFVATDAIR 336 Query: 1504 SETNLLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNV 1683 E L+ L+ R P W+ L K G A++D+ ICA + Sbjct: 337 KEQEELRKLLPEMVRFEPT-----------WEELELYKDGG-----VAIIDQWICAHARF 380 Query: 1684 FIGSSGSTFT 1713 FIG+S STF+ Sbjct: 381 FIGTSVSTFS 390
>Q9Y2G5:OFUT2_HUMAN GDP-fucose protein O-fucosyltransferase 2 precursor - Homo sapiens| (Human) Length = 429 Score = 37.7 bits (86), Expect = 0.18 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%) Frame = +1 Query: 1333 LGGNYIALHFRRHGFLKFCNVKKESCFFPIPQAAGCILRI---IEKANAPVIYLSTDAAG 1503 LGG Y+ +H RR F+ +++ +P G + +I ++ ++++TDA Sbjct: 284 LGGPYLGVHLRRKDFI--WGHRQD-----VPSLEGAVRKIRSLMKTHRLDKVFVATDAVR 336 Query: 1504 SETNLLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNV 1683 E L+ L+ R P W+ L K G A++D+ ICA + Sbjct: 337 KEYEELKKLLPEMVRFEPT-----------WEELELYKDGG-----VAIIDQWICAHARF 380 Query: 1684 FIGSSGSTFT 1713 FIG+S STF+ Sbjct: 381 FIGTSVSTFS 390
>Q8K394:PLCL2_MOUSE Inactive phospholipase C-like protein 2 - Mus musculus (Mouse)| Length = 1128 Score = 35.4 bits (80), Expect = 0.90 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 916 INHINECIGRKVVITYEEFVDKRKK--VSIDQFICYVGSPPCYM-DEDHIKKLKSVGISM 1086 + HINE I +++ YE + ++K +SID F Y+ SP CY+ D +H K + + + Sbjct: 374 VAHINEEISLEIIHKYEPSKEGQEKGWLSIDGFTNYLMSPDCYIFDPEHKKVCQDMKQPL 433 Query: 1087 GKIEAAWPEDAKLKEPKKRYAADIT 1161 + L E + R +DIT Sbjct: 434 SHYFINSSHNTYLIEDQFRGPSDIT 458
>Q9UPR0:PLCL2_HUMAN Inactive phospholipase C-like protein 2 - Homo sapiens (Human)| Length = 1127 Score = 35.4 bits (80), Expect = 0.90 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 916 INHINECIGRKVVITYEEFVDKRKK--VSIDQFICYVGSPPCYM-DEDHIKKLKSVGISM 1086 + HINE I +++ YE + ++K +SID F Y+ SP CY+ D +H K + + + Sbjct: 373 VAHINEEISLEIIHKYEPSKEGQEKGWLSIDGFTNYLMSPDCYIFDPEHKKVCQDMKQPL 432 Query: 1087 GKIEAAWPEDAKLKEPKKRYAADIT 1161 + L E + R +DIT Sbjct: 433 SHYFINSSHNTYLIEDQFRGPSDIT 457
>P41229:JAD1C_HUMAN Histone demethylase JARID1C - Homo sapiens (Human)| Length = 1560 Score = 35.0 bits (79), Expect = 1.2 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = +1 Query: 1561 VRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRG 1740 +R+ + EG E ++ ++ +GGD +VE+ KT S + S T+ RLRR Sbjct: 257 LRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLE-SKEELSHSPEPCTKMTMRLRRN 315 Query: 1741 WGSMSYCDEYLCQ 1779 + + + Y+C+ Sbjct: 316 HSNAQFIESYVCR 328
>A1YVX4:JAD1C_PIG Histone demethylase JARID1C - Sus scrofa (Pig)| Length = 1516 Score = 33.9 bits (76), Expect = 2.6 Identities = 20/73 (27%), Positives = 36/73 (49%) Frame = +1 Query: 1561 VRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRG 1740 +R+ + EG E ++ ++ GGD +VE+ KT S + S T+ RLRR Sbjct: 216 LRKKDKEGPECPPTVVVKEESGGDVKVESTSPKTFLE-SKEELSHSPEPCTKMTMRLRRN 274 Query: 1741 WGSMSYCDEYLCQ 1779 + + + Y+C+ Sbjct: 275 HSNAQFIESYVCR 287
>Q38JA7:JAD1C_CANFA Histone demethylase JARID1C - Canis familiaris (Dog)| Length = 1556 Score = 33.9 bits (76), Expect = 2.6 Identities = 20/73 (27%), Positives = 36/73 (49%) Frame = +1 Query: 1561 VRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRG 1740 +R+ + EG E ++ ++ GGD +VE+ KT S + S T+ RLRR Sbjct: 257 LRKKDKEGPECPPTVVVKEESGGDVKVESTSPKTFLE-SKEELSHSPEPCTKMTMRLRRN 315 Query: 1741 WGSMSYCDEYLCQ 1779 + + + Y+C+ Sbjct: 316 HSNAQFIESYVCR 328
>Q01919:KIN4_YEAST Serine/threonine-protein kinase KIN4 - Saccharomyces cerevisiae| (Baker's yeast) Length = 800 Score = 33.1 bits (74), Expect = 4.5 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%) Frame = +1 Query: 886 VDYQYDRVLDINH----INECIGR-KVVITYEEFVDKRKKVSID----QFICYVGSPPCY 1038 VDY Y + D+NH I E I + +T++ + + SID I P Sbjct: 575 VDYHY-AIGDLNHGDKPITEVIDKINKDLTHKAAENGFPRESIDPESTSTILVTKEPTNS 633 Query: 1039 MDEDHIK-KLKSVGISMGKIEAAWPEDAKLKEPKKRYA 1149 DEDH++ +L++VG S K +A+ +D+K KKR++ Sbjct: 634 TDEDHVESQLENVGHSSNKSDASSDKDSKKIYEKKRFS 671
>P41230:JAD1C_MOUSE Histone demethylase JARID1C - Mus musculus (Mouse)| Length = 1554 Score = 32.3 bits (72), Expect = 7.6 Identities = 18/73 (24%), Positives = 36/73 (49%) Frame = +1 Query: 1561 VRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVFIGSSGSTFTEDIFRLRRG 1740 +R+ + EG E ++ ++ +GGD ++E+ KT + S T+ RLRR Sbjct: 257 LRKKDKEGPECPPTVVVKEELGGDVKMESTSPKTFLE-GKEELSHSPEPCTKMTMRLRRN 315 Query: 1741 WGSMSYCDEYLCQ 1779 + + + Y+C+ Sbjct: 316 HSNAQFIESYVCR 328
>Q1RIN6:IPYR_RICBR Inorganic pyrophosphatase - Rickettsia bellii (strain RML369-C)| Length = 175 Score = 32.3 bits (72), Expect = 7.6 Identities = 11/43 (25%), Positives = 27/43 (62%) Frame = +1 Query: 859 RILVVPSQKVDYQYDRVLDINHINECIGRKVVITYEEFVDKRK 987 +I+ VP+ K+D +D + +++ + E + +++V +E + D K Sbjct: 104 KIIAVPTSKLDITFDHIKELDDVCEMLKKRIVHFFEHYKDLEK 146
>P40007:YEJ2_YEAST Uncharacterized protein YER002W - Saccharomyces cerevisiae (Baker's| yeast) Length = 231 Score = 32.0 bits (71), Expect = 9.9 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +1 Query: 1507 ETNLLQSLIVFNDRQVPLVRRPEHEGSEKWDALLYRKHMGGDDQVEAMLDKTICALSNVF 1686 ET +++ L R V R + E E+W LY+KH GDD + DK + N++ Sbjct: 155 ETEVVKKLEELASRPVIRKERSQSEREEEWLEKLYKKH--GDDYKKMFFDKKL----NIY 208 Query: 1687 IGSSG 1701 S G Sbjct: 209 QQSEG 213
>Q9ZCW5:IPYR_RICPR Inorganic pyrophosphatase - Rickettsia prowazekii| Length = 172 Score = 32.0 bits (71), Expect = 9.9 Identities = 11/43 (25%), Positives = 27/43 (62%) Frame = +1 Query: 859 RILVVPSQKVDYQYDRVLDINHINECIGRKVVITYEEFVDKRK 987 +I+ VP+ K+D +D + +++ + E + +++V +E + D K Sbjct: 104 KIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEK 146
>Q4UKW0:IPYR_RICFE Inorganic pyrophosphatase - Rickettsia felis (Rickettsia azadi)| Length = 173 Score = 32.0 bits (71), Expect = 9.9 Identities = 11/43 (25%), Positives = 27/43 (62%) Frame = +1 Query: 859 RILVVPSQKVDYQYDRVLDINHINECIGRKVVITYEEFVDKRK 987 +I+ VP+ K+D +D + +++ + E + +++V +E + D K Sbjct: 104 KIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEK 146 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 320,451,556 Number of extensions: 7193591 Number of successful extensions: 20776 Number of sequences better than 10.0: 16 Number of HSP's gapped: 20762 Number of HSP's successfully gapped: 16 Length of query: 670 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 550 Effective length of database: 67,771,039 Effective search space: 37274071450 Effective search space used: 37274071450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
