| Clone Name | FLbaf126d01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243690.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100090O16, full insert sequence Length = 1848 Score = 644 bits (325), Expect = 0.0 Identities = 559/637 (87%) Strand = Plus / Plus Query: 1151 ccaacttgccggctagagcatgttgtgttgtggtagaatatctcgctggtggcactttga 1210 |||||||||| || |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct: 783 ccaacttgcctgccagagcatgttgtgttgtggttgaatatctagctggaggaactttga 842 Query: 1211 aacagtacctgataaagaacagacggcggaagcttgcctacaaagttgtggttcagcttg 1270 | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 843 agcagtatctgataaagaacagtcgacggaagcttgcatacaaagttgtagttcagcttg 902 Query: 1271 cattggatctgtccagaggactgagctatctacactccagaaagatagtacatcgtgatg 1330 |||||||| || |||||||| |||||||||| ||||| |||||||| ||||||||||||| Sbjct: 903 cattggatttggccagaggattgagctatctccactctagaaagattgtacatcgtgatg 962 Query: 1331 tgaaaactgaaaatatgctgcttgatacacagcgtaaccttaagattgctgatttcggtg 1390 | ||||||||||| ||||| |||||||||||| | |||||||| ||||||||||| |||| Sbjct: 963 tcaaaactgaaaacatgctccttgatacacagagaaaccttaaaattgctgattttggtg 1022 Query: 1391 ttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgaccggcacgcttggtt 1450 |||| || || |||||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1023 ttgctcgggtcgaggctcagaatccaaaggatatgactggtgcgacaggcactcttggtt 1082 Query: 1451 acatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagtt 1510 | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1083 atatggccccagaggttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagtt 1142 Query: 1511 ttggcatttgcttgtgggaagtctattgctgtgacatgccatacccagacctaagttttg 1570 |||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1143 ttggaatttgcttatgggaaatctattgttgtgacatgccatacccagacctaagttttg 1202 Query: 1571 ccgatgtctcttctgctgttgttcaccagaacttgcggccagacataccccgttgctgcc 1630 |||||||||| ||||||||||| || |||||| |||| |||||| | || | ||||| | Sbjct: 1203 ccgatgtctcatctgctgttgtccatcagaacctgcgcccagacgttcctagatgctgtc 1262 Query: 1631 caagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaacgccctg 1690 ||||||| || || || || ||||| || |||||||||| ||| |||||||| || |||| Sbjct: 1263 caagtgcattcgcaaatatcatgcggaaatgctgggatgcaaatcctgataagcgtcctg 1322 Query: 1691 acatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcggtatga 1750 | ||||| |||||||||||||| | ||||| || ||||| |||||||| || || |||| Sbjct: 1323 atatggatgaggtggtgcagcttctagaggctcttgacacaagcaaaggtggtggcatga 1382 Query: 1751 taccggatggccagtcgtccggatgcttatgtttcac 1787 |||| ||||| ||||| || || ||||| || ||||| Sbjct: 1383 taccagatggtcagtcatctggttgcttgtgcttcac 1419 Score = 335 bits (169), Expect = 4e-88 Identities = 307/353 (86%) Strand = Plus / Plus Query: 757 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 816 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 383 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 442 Query: 817 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 876 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 443 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 502 Query: 877 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 936 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 503 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 562 Query: 937 ggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggtttt 996 ||||| ||||||||||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 563 ggcacgtatgatggccaagatgttgcagtgaagctgttggattggggagaagatggtttt 622 Query: 997 gccacagaagccgaaactactgctttacgaacatcatttaagcaggaggttgctgtttgg 1056 ||||||||||| |||||| ||||||| || ||||||||||||||||||||||| |||||| Sbjct: 623 gccacagaagctgaaactgctgctttgcggacatcatttaagcaggaggttgcagtttgg 682 Query: 1057 cataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggggac 1109 |||||||||||||||||||| ||||| ||||||||||| || || |||||||| Sbjct: 683 cataagctcagccatcctaatgttacaaagtttgttggagcctcaatggggac 735
>ref|NM_001057267.1| Oryza sativa (japonica cultivar-group) Os03g0638800 (Os03g0638800) mRNA, complete cds Length = 1212 Score = 638 bits (322), Expect = e-179 Identities = 538/610 (88%) Strand = Plus / Plus Query: 1151 ccaacttgccggctagagcatgttgtgttgtggtagaatatctcgctggtggcactttga 1210 |||||||||| || |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct: 485 ccaacttgcctgccagagcatgttgtgttgtggttgaatatctagctggaggaactttga 544 Query: 1211 aacagtacctgataaagaacagacggcggaagcttgcctacaaagttgtggttcagcttg 1270 | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 545 agcagtatctgataaagaacagtcgacggaagcttgcatacaaagttgtagttcagcttg 604 Query: 1271 cattggatctgtccagaggactgagctatctacactccagaaagatagtacatcgtgatg 1330 |||||||| || |||||||| |||||||||| ||||| |||||||| ||||||||||||| Sbjct: 605 cattggatttggccagaggattgagctatctccactctagaaagattgtacatcgtgatg 664 Query: 1331 tgaaaactgaaaatatgctgcttgatacacagcgtaaccttaagattgctgatttcggtg 1390 | ||||||||||| ||||| |||||||||||| | |||||||| ||||||||||| |||| Sbjct: 665 tcaaaactgaaaacatgctccttgatacacagagaaaccttaaaattgctgattttggtg 724 Query: 1391 ttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgaccggcacgcttggtt 1450 |||| || || |||||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 725 ttgctcgggtcgaggctcagaatccaaaggatatgactggtgcgacaggcactcttggtt 784 Query: 1451 acatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagtt 1510 | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 785 atatggccccagaggttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagtt 844 Query: 1511 ttggcatttgcttgtgggaagtctattgctgtgacatgccatacccagacctaagttttg 1570 |||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 845 ttggaatttgcttatgggaaatctattgttgtgacatgccatacccagacctaagttttg 904 Query: 1571 ccgatgtctcttctgctgttgttcaccagaacttgcggccagacataccccgttgctgcc 1630 |||||||||| ||||||||||| || |||||| |||| |||||| | || | ||||| | Sbjct: 905 ccgatgtctcatctgctgttgtccatcagaacctgcgcccagacgttcctagatgctgtc 964 Query: 1631 caagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaacgccctg 1690 ||||||| || || || || ||||| || |||||||||| ||| |||||||| || |||| Sbjct: 965 caagtgcattcgcaaatatcatgcggaaatgctgggatgcaaatcctgataagcgtcctg 1024 Query: 1691 acatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcggtatga 1750 | ||||| |||||||||||||| | ||||| || ||||| |||||||| || || |||| Sbjct: 1025 atatggatgaggtggtgcagcttctagaggctcttgacacaagcaaaggtggtggcatga 1084 Query: 1751 taccggatgg 1760 |||| ||||| Sbjct: 1085 taccagatgg 1094 Score = 335 bits (169), Expect = 4e-88 Identities = 307/353 (86%) Strand = Plus / Plus Query: 757 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 816 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 85 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 144 Query: 817 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 876 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 145 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 204 Query: 877 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 936 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 205 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 264 Query: 937 ggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggtttt 996 ||||| ||||||||||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 265 ggcacgtatgatggccaagatgttgcagtgaagctgttggattggggagaagatggtttt 324 Query: 997 gccacagaagccgaaactactgctttacgaacatcatttaagcaggaggttgctgtttgg 1056 ||||||||||| |||||| ||||||| || ||||||||||||||||||||||| |||||| Sbjct: 325 gccacagaagctgaaactgctgctttgcggacatcatttaagcaggaggttgcagtttgg 384 Query: 1057 cataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggggac 1109 |||||||||||||||||||| ||||| ||||||||||| || || |||||||| Sbjct: 385 cataagctcagccatcctaatgttacaaagtttgttggagcctcaatggggac 437
>gb|AY105609.1| Zea mays PCO130861 mRNA sequence Length = 773 Score = 392 bits (198), Expect = e-105 Identities = 384/445 (86%), Gaps = 1/445 (0%) Strand = Plus / Plus Query: 1165 agagcatgttgtgttgtggtagaatatctcgctggtggcactttgaaacagtacctgata 1224 |||||||||||||||||||| |||||||||||||| || | |||| ||||| | ||| Sbjct: 273 agagcatgttgtgttgtggtcgaatatctcgctggaggatcactgaagcagtatttaata 332 Query: 1225 aagaacagacggcggaagcttgcctacaaagttgtggttcagcttgcattggatctgtcc 1284 |||||||| || |||||||||| ||||| ||||| |||||| | ||| ||||||| || Sbjct: 333 aagaacaggcgaaggaagcttgcatacaaggttgttgttcagatagcactggatcttgcc 392 Query: 1285 agaggactgagctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaat 1344 |||||| ||| ||||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 393 agaggattgaactatctacattcaagaaagatagtacatcgggatgtaaaaactgaaaat 452 Query: 1345 atgctgcttgatacacagcgtaaccttaagattgctgatttcggtgttgcacgtgttgag 1404 |||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 453 atgctgctcgatacacagcgaaaccttaagattgctgattttggtgttgctcgtgttgag 512 Query: 1405 gctcagaatccgaaggatatgactggtgcgaccggcacgcttggttacatggccccagag 1464 ||||||||||| ||||| ||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 513 gctcagaatccaaaggacatgacaggcgcgactgggacacttggctacatggccccagag 572 Query: 1465 gttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgcttg 1524 || ||||| || || |||||||||||||| |||||||| || ||||||||||| ||||| Sbjct: 573 gtgcttgaaggcaagccatacaacagaaagtgtgatgtctacagttttggcatatgctta 632 Query: 1525 t-gggaagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctcttc 1583 | ||||| | || ||||||||||||||||| |||||||| |||||||| || ||||| || Sbjct: 633 tggggaaatatactgctgtgacatgccatatccagacctcagttttgcagacgtctcgtc 692 Query: 1584 tgctgttgttcaccagaacttgcgg 1608 || || |||||||||||| ||||| Sbjct: 693 cgccgtcgttcaccagaacntgcgg 717 Score = 127 bits (64), Expect = 2e-25 Identities = 163/196 (83%) Strand = Plus / Plus Query: 934 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggt 993 |||||||| |||||||| ||| | |||||||| || || ||||||||||| |||||||| Sbjct: 36 cgcggcacgtatgatgggcaggacgtcgcagtaaaactattggattggggtgaagatggc 95 Query: 994 tttgccacagaagccgaaactactgctttacgaacatcatttaagcaggaggttgctgtt 1053 ||||| ||||| | |||||| | | | ||| ||||||||||||||||||||||||| Sbjct: 96 tttgcgtcagaaactgaaactgccacactgcgagcatcatttaagcaggaggttgctgtc 155 Query: 1054 tggcataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggggaccact 1113 |||||| |||||| |||||| || ||||| |||||||||||||| || ||||| || || Sbjct: 156 tggcatgagctcaaccatccgaatgttacaaagtttgttggtgcatcaatgggtactaca 215 Query: 1114 gacctcaagataccag 1129 ||||| ||||| |||| Sbjct: 216 gaccttaagattccag 231
>gb|AY108753.1| Zea mays PCO090965 mRNA sequence Length = 1019 Score = 315 bits (159), Expect = 4e-82 Identities = 286/329 (86%) Strand = Plus / Plus Query: 754 tatgtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctc 813 |||||||| || |||||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 681 tatgtgcgtgcagacaagattgatcttacgagcctcgacatccagctggagaaccagctc 740 Query: 814 aacaagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagatt 873 | ||||| ||| |||| |||| |||| || | ||| || |||| ||| |||||||| Sbjct: 741 accaagacctggggcaaagccaatctcaaatcccaggggccaaaggaggagtgggagatc 800 Query: 874 gaccttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctac 933 |||||||| |||||||||||||| | ||||||||||||||||| ||||| || |||||| Sbjct: 801 gaccttgcaaagctggagatccgctatgtcatcgctcaggggacgtatggcacggtctac 860 Query: 934 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggt 993 || |||||||| ||||| ||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 861 cggggcacctacgatggacaggacgtcgcagtgaagcttttggattggggagaagatggt 920 Query: 994 tttgccacagaagccgaaactactgctttacgaacatcatttaagcaggaggttgctgtt 1053 |||||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| Sbjct: 921 tttgccacagaagctgaaactgctgctttacgaacatcatttaagacggaggttnctgtt 980 Query: 1054 tggcataagctcagccatcctaacgttac 1082 ||||||||||||||||| ||||| ||||| Sbjct: 981 tggcataagctcagccancctaatgttac 1009
>gb|AY111050.1| Zea mays CL38019_1 mRNA sequence Length = 581 Score = 214 bits (108), Expect = 1e-51 Identities = 194/223 (86%) Strand = Plus / Minus Query: 1565 gttttgccgatgtctcttctgctgttgttcaccagaacttgcggccagacataccccgtt 1624 |||||||||||||||| ||||| |||||||||||||| ||||| |||||||| || || | Sbjct: 572 gttttgccgatgtctcatctgccgttgttcaccagaatttgcgcccagacattcctcgct 513 Query: 1625 gctgcccaagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaac 1684 |||||||||| || |||||||| ||||||| || |||||||||| |||||||||||||| Sbjct: 512 gctgcccaagcgcatttgcgaatgttatgcggaaatgctgggatgcaaaccctgataaac 453 Query: 1685 gccctgacatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcg 1744 ||||||| ||||| || ||||||||||| | ||||| || ||||||||||||||||| | Sbjct: 452 gccctgatatggatgaagtggtgcagcttttagaggctctggacacgagcaaaggcggng 393 Query: 1745 gtatgataccggatggccagtcgtccggatgcttatgtttcac 1787 | |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 392 gcatgatacctgatggccaatcatcaggatgcttatgcttcac 350
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 212 bits (107), Expect = 4e-51 Identities = 158/175 (90%) Strand = Plus / Minus Query: 1292 tgagctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgc 1351 |||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 106704 tgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaacatgctcc 106645 Query: 1352 ttgatacacagcgtaaccttaagattgctgatttcggtgttgcacgtgttgaggctcaga 1411 ||||||||||| | |||||||| ||||||||||| |||||||| || || |||||||||| Sbjct: 106644 ttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgaggctcaga 106585 Query: 1412 atccgaaggatatgactggtgcgaccggcacgcttggttacatggccccagaggt 1466 |||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 106584 atccaaaggatatgactggtgcgacaggcactcttggttatatggccccagaggt 106530 Score = 202 bits (102), Expect = 4e-48 Identities = 123/130 (94%) Strand = Plus / Minus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgct 1522 ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 106421 aggttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagttttggaatttgct 106362 Query: 1523 tgtgggaagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctctt 1582 | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106361 tatgggaaatctattgttgtgacatgccatacccagacctaagttttgccgatgtctcat 106302 Query: 1583 ctgctgttgt 1592 |||||||||| Sbjct: 106301 ctgctgttgt 106292 Score = 192 bits (97), Expect = 4e-45 Identities = 115/121 (95%) Strand = Plus / Minus Query: 962 cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 1021 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 107556 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 107497 Query: 1022 tacgaacatcatttaagcaggaggttgctgtttggcataagctcagccatcctaacgtta 1081 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 107496 tgcggacatcatttaagcaggaggttgcagtttggcataagctcagccatcctaatgtta 107437 Query: 1082 c 1082 | Sbjct: 107436 c 107436 Score = 165 bits (83), Expect = 8e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 1151 ccaacttgccggctagagcatgttgtgttgtggtagaatatctcgctggtggcactttga 1210 |||||||||| || |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct: 106924 ccaacttgcctgccagagcatgttgtgttgtggttgaatatctagctggaggaactttga 106865 Query: 1211 aacagtacctgataaagaacagacggcggaagcttgcctacaaagttgtggttcagcttg 1270 | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 106864 agcagtatctgataaagaacagtcgacggaagcttgcatacaaagttgtagttcagcttg 106805 Query: 1271 cattggatctgtccagagg 1289 |||||||| || ||||||| Sbjct: 106804 cattggatttggccagagg 106786 Score = 137 bits (69), Expect = 2e-28 Identities = 165/197 (83%) Strand = Plus / Minus Query: 757 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 816 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 109762 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 109703 Query: 817 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 876 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 109702 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 109643 Query: 877 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 936 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 109642 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 109583 Query: 937 ggcacctatgatggcca 953 ||||| ||||||||||| Sbjct: 109582 ggcacgtatgatggcca 109566 Score = 87.7 bits (44), Expect = 2e-13 Identities = 134/164 (81%) Strand = Plus / Minus Query: 1624 tgctgcccaagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaa 1683 ||||| |||||||| || || || || ||||| || |||||||||| ||| |||||||| Sbjct: 106180 tgctgtccaagtgcattcgcaaatatcatgcggaaatgctgggatgcaaatcctgataag 106121 Query: 1684 cgccctgacatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggc 1743 || ||||| ||||| |||||||||||||| | ||||| || ||||| |||||||| || Sbjct: 106120 cgtcctgatatggatgaggtggtgcagcttctagaggctcttgacacaagcaaaggtggt 106061 Query: 1744 ggtatgataccggatggccagtcgtccggatgcttatgtttcac 1787 || |||||||| ||||| ||||| || || ||||| || ||||| Sbjct: 106060 ggcatgataccagatggtcagtcatctggttgcttgtgcttcac 106017
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 212 bits (107), Expect = 4e-51 Identities = 158/175 (90%) Strand = Plus / Minus Query: 1292 tgagctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgc 1351 |||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 13371 tgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaacatgctcc 13312 Query: 1352 ttgatacacagcgtaaccttaagattgctgatttcggtgttgcacgtgttgaggctcaga 1411 ||||||||||| | |||||||| ||||||||||| |||||||| || || |||||||||| Sbjct: 13311 ttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgaggctcaga 13252 Query: 1412 atccgaaggatatgactggtgcgaccggcacgcttggttacatggccccagaggt 1466 |||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 13251 atccaaaggatatgactggtgcgacaggcactcttggttatatggccccagaggt 13197 Score = 202 bits (102), Expect = 4e-48 Identities = 123/130 (94%) Strand = Plus / Minus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgct 1522 ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 13088 aggttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagttttggaatttgct 13029 Query: 1523 tgtgggaagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctctt 1582 | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 13028 tatgggaaatctattgttgtgacatgccatacccagacctaagttttgccgatgtctcat 12969 Query: 1583 ctgctgttgt 1592 |||||||||| Sbjct: 12968 ctgctgttgt 12959 Score = 192 bits (97), Expect = 4e-45 Identities = 115/121 (95%) Strand = Plus / Minus Query: 962 cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 1021 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 14223 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 14164 Query: 1022 tacgaacatcatttaagcaggaggttgctgtttggcataagctcagccatcctaacgtta 1081 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 14163 tgcggacatcatttaagcaggaggttgcagtttggcataagctcagccatcctaatgtta 14104 Query: 1082 c 1082 | Sbjct: 14103 c 14103 Score = 165 bits (83), Expect = 8e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 1151 ccaacttgccggctagagcatgttgtgttgtggtagaatatctcgctggtggcactttga 1210 |||||||||| || |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct: 13591 ccaacttgcctgccagagcatgttgtgttgtggttgaatatctagctggaggaactttga 13532 Query: 1211 aacagtacctgataaagaacagacggcggaagcttgcctacaaagttgtggttcagcttg 1270 | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 13531 agcagtatctgataaagaacagtcgacggaagcttgcatacaaagttgtagttcagcttg 13472 Query: 1271 cattggatctgtccagagg 1289 |||||||| || ||||||| Sbjct: 13471 cattggatttggccagagg 13453 Score = 137 bits (69), Expect = 2e-28 Identities = 165/197 (83%) Strand = Plus / Minus Query: 757 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 816 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 16429 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 16370 Query: 817 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 876 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 16369 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 16310 Query: 877 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 936 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 16309 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 16250 Query: 937 ggcacctatgatggcca 953 ||||| ||||||||||| Sbjct: 16249 ggcacgtatgatggcca 16233 Score = 87.7 bits (44), Expect = 2e-13 Identities = 134/164 (81%) Strand = Plus / Minus Query: 1624 tgctgcccaagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaa 1683 ||||| |||||||| || || || || ||||| || |||||||||| ||| |||||||| Sbjct: 12847 tgctgtccaagtgcattcgcaaatatcatgcggaaatgctgggatgcaaatcctgataag 12788 Query: 1684 cgccctgacatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggc 1743 || ||||| ||||| |||||||||||||| | ||||| || ||||| |||||||| || Sbjct: 12787 cgtcctgatatggatgaggtggtgcagcttctagaggctcttgacacaagcaaaggtggt 12728 Query: 1744 ggtatgataccggatggccagtcgtccggatgcttatgtttcac 1787 || |||||||| ||||| ||||| || || ||||| || ||||| Sbjct: 12727 ggcatgataccagatggtcagtcatctggttgcttgtgcttcac 12684
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 212 bits (107), Expect = 4e-51 Identities = 158/175 (90%) Strand = Plus / Plus Query: 1292 tgagctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgc 1351 |||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 24284722 tgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaacatgctcc 24284781 Query: 1352 ttgatacacagcgtaaccttaagattgctgatttcggtgttgcacgtgttgaggctcaga 1411 ||||||||||| | |||||||| ||||||||||| |||||||| || || |||||||||| Sbjct: 24284782 ttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgaggctcaga 24284841 Query: 1412 atccgaaggatatgactggtgcgaccggcacgcttggttacatggccccagaggt 1466 |||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 24284842 atccaaaggatatgactggtgcgacaggcactcttggttatatggccccagaggt 24284896 Score = 202 bits (102), Expect = 4e-48 Identities = 123/130 (94%) Strand = Plus / Plus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgct 1522 ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| Sbjct: 24285005 aggttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagttttggaatttgct 24285064 Query: 1523 tgtgggaagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctctt 1582 | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 24285065 tatgggaaatctattgttgtgacatgccatacccagacctaagttttgccgatgtctcat 24285124 Query: 1583 ctgctgttgt 1592 |||||||||| Sbjct: 24285125 ctgctgttgt 24285134 Score = 192 bits (97), Expect = 4e-45 Identities = 115/121 (95%) Strand = Plus / Plus Query: 962 cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 1021 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 24283870 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 24283929 Query: 1022 tacgaacatcatttaagcaggaggttgctgtttggcataagctcagccatcctaacgtta 1081 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 24283930 tgcggacatcatttaagcaggaggttgcagtttggcataagctcagccatcctaatgtta 24283989 Query: 1082 c 1082 | Sbjct: 24283990 c 24283990 Score = 165 bits (83), Expect = 8e-37 Identities = 125/139 (89%) Strand = Plus / Plus Query: 1151 ccaacttgccggctagagcatgttgtgttgtggtagaatatctcgctggtggcactttga 1210 |||||||||| || |||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct: 24284502 ccaacttgcctgccagagcatgttgtgttgtggttgaatatctagctggaggaactttga 24284561 Query: 1211 aacagtacctgataaagaacagacggcggaagcttgcctacaaagttgtggttcagcttg 1270 | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 24284562 agcagtatctgataaagaacagtcgacggaagcttgcatacaaagttgtagttcagcttg 24284621 Query: 1271 cattggatctgtccagagg 1289 |||||||| || ||||||| Sbjct: 24284622 cattggatttggccagagg 24284640 Score = 137 bits (69), Expect = 2e-28 Identities = 165/197 (83%) Strand = Plus / Plus Query: 757 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 816 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 24281664 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 24281723 Query: 817 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 876 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 24281724 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 24281783 Query: 877 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 936 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 24281784 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 24281843 Query: 937 ggcacctatgatggcca 953 ||||| ||||||||||| Sbjct: 24281844 ggcacgtatgatggcca 24281860 Score = 87.7 bits (44), Expect = 2e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 1624 tgctgcccaagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgataaa 1683 ||||| |||||||| || || || || ||||| || |||||||||| ||| |||||||| Sbjct: 24285246 tgctgtccaagtgcattcgcaaatatcatgcggaaatgctgggatgcaaatcctgataag 24285305 Query: 1684 cgccctgacatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggc 1743 || ||||| ||||| |||||||||||||| | ||||| || ||||| |||||||| || Sbjct: 24285306 cgtcctgatatggatgaggtggtgcagcttctagaggctcttgacacaagcaaaggtggt 24285365 Query: 1744 ggtatgataccggatggccagtcgtccggatgcttatgtttcac 1787 || |||||||| ||||| ||||| || || ||||| || ||||| Sbjct: 24285366 ggcatgataccagatggtcagtcatctggttgcttgtgcttcac 24285409
>ref|NM_001073759.1| Oryza sativa (japonica cultivar-group) Os12g0605900 (Os12g0605900) mRNA, complete cds Length = 1692 Score = 176 bits (89), Expect = 2e-40 Identities = 220/263 (83%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 1258 gtggttcagcttgcattggatctgtccagaggactgagctatctacactccagaaagata 1317 ||||||| ||||||||||||| || |||||||| |||||| || ||||| | |||||| Sbjct: 790 gtggttcggcttgcattggatttggccagaggattgagcttcctgcactcaaaaaagatt 849 Query: 1318 gtacatcgtgatgtgaaaactgaaaatatgctgcttgatacacagcgtaaccttaagatt 1377 || ||||| ||||| |||| ||| || ||||| ||||| |||||| |||||||||||| Sbjct: 850 gtgcatcgggatgtcaaaagtgagaacatgctacttgacccacagctgaaccttaagatt 909 Query: 1378 gctgatttcggtgttgcacgt---gttgaggctcagaatccgaaggatatgactggtgcg 1434 |||||||| |||||||| ||| |||||||||||| |||| |||||| |||| | || Sbjct: 910 gctgattttggtgttgctcgtctcgttgaggctcaggatcccaaggatttgacacgcacg 969 Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 || || || ||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 970 actggaacacttggttacatggccccagaggtgcttgatggaaagccatacaacagaaag 1029 Query: 1495 tgtgatgtttatagttttggcat 1517 || |||||||| ||||| ||||| Sbjct: 1030 tgcgatgtttacagtttcggcat 1052 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1165 agagcatgttgtgttgtggtagaatatctcgctggtggcactttgaaacag 1215 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 691 agagcatgctgtgttgtggtagaatatctcactgggggcacattgaaacag 741 Score = 50.1 bits (25), Expect = 0.034 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1025 gaacatcatttaagcaggaggttgctgtttggcataagctcagccatcc 1073 |||||||| ||||| ||| |||||||||||||||| || ||| |||||| Sbjct: 533 gaacatcacttaaggaggtggttgctgtttggcatgagttcaaccatcc 581 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 958 gtcgcagtgaagctgttggattgggg 983 ||||||||||| |||||||||||||| Sbjct: 466 gtcgcagtgaaactgttggattgggg 491 Score = 42.1 bits (21), Expect = 8.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| ||| | ||| |||| ||||||||||| |||||||| Sbjct: 1237 atggaggaggtggtgcgcctcctcgagtccctggacacgagcaatggcggcgg 1289
>dbj|AK109696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F01, full insert sequence Length = 1692 Score = 176 bits (89), Expect = 2e-40 Identities = 220/263 (83%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 1258 gtggttcagcttgcattggatctgtccagaggactgagctatctacactccagaaagata 1317 ||||||| ||||||||||||| || |||||||| |||||| || ||||| | |||||| Sbjct: 790 gtggttcggcttgcattggatttggccagaggattgagcttcctgcactcaaaaaagatt 849 Query: 1318 gtacatcgtgatgtgaaaactgaaaatatgctgcttgatacacagcgtaaccttaagatt 1377 || ||||| ||||| |||| ||| || ||||| ||||| |||||| |||||||||||| Sbjct: 850 gtgcatcgggatgtcaaaagtgagaacatgctacttgacccacagctgaaccttaagatt 909 Query: 1378 gctgatttcggtgttgcacgt---gttgaggctcagaatccgaaggatatgactggtgcg 1434 |||||||| |||||||| ||| |||||||||||| |||| |||||| |||| | || Sbjct: 910 gctgattttggtgttgctcgtctcgttgaggctcaggatcccaaggatttgacacgcacg 969 Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 || || || ||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 970 actggaacacttggttacatggccccagaggtgcttgatggaaagccatacaacagaaag 1029 Query: 1495 tgtgatgtttatagttttggcat 1517 || |||||||| ||||| ||||| Sbjct: 1030 tgcgatgtttacagtttcggcat 1052 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1165 agagcatgttgtgttgtggtagaatatctcgctggtggcactttgaaacag 1215 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 691 agagcatgctgtgttgtggtagaatatctcactgggggcacattgaaacag 741 Score = 50.1 bits (25), Expect = 0.034 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1025 gaacatcatttaagcaggaggttgctgtttggcataagctcagccatcc 1073 |||||||| ||||| ||| |||||||||||||||| || ||| |||||| Sbjct: 533 gaacatcacttaaggaggtggttgctgtttggcatgagttcaaccatcc 581 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 958 gtcgcagtgaagctgttggattgggg 983 ||||||||||| |||||||||||||| Sbjct: 466 gtcgcagtgaaactgttggattgggg 491 Score = 42.1 bits (21), Expect = 8.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| ||| | ||| |||| ||||||||||| |||||||| Sbjct: 1237 atggaggaggtggtgcgcctcctcgagtccctggacacgagcaatggcggcgg 1289
>gb|EF014129.1| Synthetic construct flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase (AT3G22750) mRNA, complete cds Length = 1170 Score = 149 bits (75), Expect = 5e-32 Identities = 186/223 (83%) Strand = Plus / Plus Query: 1372 aagattgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggt 1431 |||||||||||||| || ||||| | ||||| ||||||||||| || || |||||||| Sbjct: 703 aagattgctgattttggggttgctagagttgaagctcagaatccaaaagacatgactgga 762 Query: 1432 gcgaccggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacaga 1491 | || || || ||||| |||||||| ||||||||||||||||| || |||||||||||| Sbjct: 763 gaaactggaactcttggatacatggctccagaggttcttgatggcaagccatacaacaga 822 Query: 1492 aaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgcca 1551 | |||||||||||| || ||||| || ||||||||||| | ||||| ||||| ||||| Sbjct: 823 agatgtgatgtttacagctttgggatatgcttgtgggagatttattgttgtgatatgcct 882 Query: 1552 tacccagacctaagttttgccgatgtctcttctgctgttgttc 1594 || || || || || ||||| ||||| |||||||||||||||| Sbjct: 883 tatcctgatctcagctttgctgatgtttcttctgctgttgttc 925
>ref|NM_113174.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT3G22750) mRNA, complete cds Length = 2092 Score = 149 bits (75), Expect = 5e-32 Identities = 186/223 (83%) Strand = Plus / Plus Query: 1372 aagattgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggt 1431 |||||||||||||| || ||||| | ||||| ||||||||||| || || |||||||| Sbjct: 1510 aagattgctgattttggggttgctagagttgaagctcagaatccaaaagacatgactgga 1569 Query: 1432 gcgaccggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacaga 1491 | || || || ||||| |||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1570 gaaactggaactcttggatacatggctccagaggttcttgatggcaagccatacaacaga 1629 Query: 1492 aaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgcca 1551 | |||||||||||| || ||||| || ||||||||||| | ||||| ||||| ||||| Sbjct: 1630 agatgtgatgtttacagctttgggatatgcttgtgggagatttattgttgtgatatgcct 1689 Query: 1552 tacccagacctaagttttgccgatgtctcttctgctgttgttc 1594 || || || || || ||||| ||||| |||||||||||||||| Sbjct: 1690 tatcctgatctcagctttgctgatgtttcttctgctgttgttc 1732
>gb|AY063013.1| Arabidopsis thaliana unknown protein (At3g22750) mRNA, complete cds Length = 1168 Score = 149 bits (75), Expect = 5e-32 Identities = 186/223 (83%) Strand = Plus / Plus Query: 1372 aagattgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggt 1431 |||||||||||||| || ||||| | ||||| ||||||||||| || || |||||||| Sbjct: 703 aagattgctgattttggggttgctagagttgaagctcagaatccaaaagacatgactgga 762 Query: 1432 gcgaccggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacaga 1491 | || || || ||||| |||||||| ||||||||||||||||| || |||||||||||| Sbjct: 763 gaaactggaactcttggatacatggctccagaggttcttgatggcaagccatacaacaga 822 Query: 1492 aaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgcca 1551 | |||||||||||| || ||||| || ||||||||||| | ||||| ||||| ||||| Sbjct: 823 agatgtgatgtttacagctttgggatatgcttgtgggagatttattgttgtgatatgcct 882 Query: 1552 tacccagacctaagttttgccgatgtctcttctgctgttgttc 1594 || || || || || ||||| ||||| |||||||||||||||| Sbjct: 883 tatcctgatctcagctttgctgatgtttcttctgctgttgttc 925
>gb|AY035004.1| Arabidopsis thaliana unknown protein (At3g22750) mRNA, complete cds Length = 2108 Score = 149 bits (75), Expect = 5e-32 Identities = 186/223 (83%) Strand = Plus / Plus Query: 1372 aagattgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggt 1431 |||||||||||||| || ||||| | ||||| ||||||||||| || || |||||||| Sbjct: 1510 aagattgctgattttggggttgctagagttgaagctcagaatccaaaagacatgactgga 1569 Query: 1432 gcgaccggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacaga 1491 | || || || ||||| |||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1570 gaaactggaactcttggatacatggctccagaggttcttgatggcaagccatacaacaga 1629 Query: 1492 aaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgcca 1551 | |||||||||||| || ||||| || ||||||||||| | ||||| ||||| ||||| Sbjct: 1630 agatgtgatgtttacagctttgggatatgcttgtgggagatttattgttgtgatatgcct 1689 Query: 1552 tacccagacctaagttttgccgatgtctcttctgctgttgttc 1594 || || || || || ||||| ||||| |||||||||||||||| Sbjct: 1690 tatcctgatctcagctttgctgatgtttcttctgctgttgttc 1732
>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence Length = 145314 Score = 111 bits (56), Expect = 1e-20 Identities = 107/124 (86%) Strand = Plus / Plus Query: 1471 gatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtgggaa 1530 ||||||||||| |||||||| | ||||||||| || || ||||||||||||||||||||| Sbjct: 113075 gatggtaaaccttacaacaggacatgtgatgtatacagctttggcatttgcttgtgggaa 113134 Query: 1531 gtctattgctgtgacatgccatacccagacctaagttttgccgatgtctcttctgctgtt 1590 | ||||||||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 113135 atttattgctgtgatatgccttatccagatctaagctttgctgatgtgtcttccgctgtc 113194 Query: 1591 gttc 1594 |||| Sbjct: 113195 gttc 113198 Score = 58.0 bits (29), Expect = 1e-04 Identities = 80/97 (82%) Strand = Plus / Plus Query: 962 cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 1021 ||||||| ||||||||||||| || |||||| |||||| | || |||||| |||||| Sbjct: 111581 cagtgaaagtgttggattggggtgaggatggtgctgccaccgctgcagaaactgctgctt 111640 Query: 1022 tacgaacatcatttaagcaggaggttgctgtttggca 1058 |||| |||| |||| |||||||||||| || ||||| Sbjct: 111641 tacgtgcatcttttaggcaggaggttgccgtctggca 111677
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23 Length = 77273 Score = 103 bits (52), Expect = 3e-18 Identities = 112/132 (84%) Strand = Plus / Minus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgct 1522 ||||||||||||| || ||||||||||||| |||||||||||| || ||||| || |||| Sbjct: 27191 aggttcttgatggcaagccatacaacagaagatgtgatgtttacagctttgggatatgct 27132 Query: 1523 tgtgggaagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctctt 1582 ||||||| | ||||| ||||| ||||| || || || || || ||||| ||||| |||| Sbjct: 27131 tgtgggagatttattgttgtgatatgccttatcctgatctcagctttgctgatgtttctt 27072 Query: 1583 ctgctgttgttc 1594 |||||||||||| Sbjct: 27071 ctgctgttgttc 27060 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Minus Query: 1372 aagattgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggt 1431 |||||||||||||| || ||||| | ||||| ||||||||||| || || |||||||| Sbjct: 27366 aagattgctgattttggggttgctagagttgaagctcagaatccaaaagacatgactgga 27307 Query: 1432 gcgaccggcacgcttggttacatggccccagaggt 1466 | || || || ||||| |||||||| |||||||| Sbjct: 27306 gaaactggaactcttggatacatggctccagaggt 27272
>gb|AY738763.1| Carica papaya serine/threonine protein kinase 1 mRNA, partial cds Length = 606 Score = 101 bits (51), Expect = 1e-17 Identities = 194/239 (81%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 1262 ttcagcttgcattggatctgtccagaggactgagctatctacactccagaaagatagtac 1321 |||| ||||| ||||| || |||||||| |||| ||||| ||||||| ||||| |||| Sbjct: 350 ttcaacttgctttggacctctccagaggcttgagttatcttcactccaagaagattgtac 409 Query: 1322 atcgtgatgtgaaaactgaaaatatgctgcttgatacacagcgtaaccttaaga-ttgct 1380 |||||||||| || || ||||||||| |||| ||||| || | ||| |||| | |||| Sbjct: 410 atcgtgatgtaaagacagaaaatatgttgctagatacccatag-aactttaaaaattgcc 468 Query: 1381 gatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgaccggc 1440 ||||| |||||||| || ||||| ||||||||||| | ||| |||||||| | || || Sbjct: 469 gattttggtgttgctcgagttgaagctcagaatccaagggacatgactggggaaactggt 528 Query: 1441 acgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtga 1499 || ||||| ||||||||||||||||| || ||||| || || ||||| || |||||||| Sbjct: 529 actcttggatacatggccccagaggtactggatggcaagccttacaataggaaatgtga 587 Score = 67.9 bits (34), Expect = 1e-07 Identities = 100/122 (81%) Strand = Plus / Plus Query: 973 ttggattggggagaagatggttttgccacagaagccgaaactactgctttacgaacatca 1032 |||||||||||||| |||||||||||||||| |||||| || |||| | || |||||| Sbjct: 55 ttggattggggagaggatggttttgccacagctgccgaagctgctgcacttcggacatca 114 Query: 1033 tttaagcaggaggttgctgtttggcataagctcagccatcctaacgttacgaagtttgtt 1092 || ||| |||||||| || ||||||||||| |||||| || ||||| |||||| || Sbjct: 115 ttccggcaagaggttgcagtgtggcataagcttgaccatccaaatgttaccaagtttatt 174 Query: 1093 gg 1094 || Sbjct: 175 gg 176
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 97.6 bits (49), Expect = 2e-16 Identities = 132/159 (83%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 1311 aaagatagtacatcgtgatgtgaaaactgaaaatatgctgcttgatacacagcgtaacct 1370 |||||| || ||||| ||||| |||| ||| || ||||| ||||| |||||| ||||| Sbjct: 25618729 aaagattgtgcatcgggatgtcaaaagtgagaacatgctacttgacccacagctgaacct 25618788 Query: 1371 taagattgctgatttcggtgttgcacgt---gttgaggctcagaatccgaaggatatgac 1427 ||||||||||||||| |||||||| ||| |||||||||||| |||| |||||| |||| Sbjct: 25618789 taagattgctgattttggtgttgctcgtctcgttgaggctcaggatcccaaggatttgac 25618848 Query: 1428 tggtgcgaccggcacgcttggttacatggccccagaggt 1466 | |||| || || ||||||||||||||||||||||| Sbjct: 25618849 acgcacgactggaacacttggttacatggccccagaggt 25618887 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1165 agagcatgttgtgttgtggtagaatatctcgctggtggcactttgaaacag 1215 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 25618493 agagcatgctgtgttgtggtagaatatctcactgggggcacattgaaacag 25618543 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcat 1517 |||| |||||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 25619052 aggtgcttgatggaaagccatacaacagaaagtgcgatgtttacagtttcggcat 25619106 Score = 50.1 bits (25), Expect = 0.034 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| | | ||||||| |||||||||||||| |||||||| Sbjct: 18402876 atggaggaggtggtgcggatgctggaggcgctcgacacgagcaatggcggcgg 18402928 Score = 50.1 bits (25), Expect = 0.034 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1025 gaacatcatttaagcaggaggttgctgtttggcataagctcagccatcc 1073 |||||||| ||||| ||| |||||||||||||||| || ||| |||||| Sbjct: 25618102 gaacatcacttaaggaggtggttgctgtttggcatgagttcaaccatcc 25618150 Score = 42.1 bits (21), Expect = 8.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| ||| | ||| |||| ||||||||||| |||||||| Sbjct: 25619541 atggaggaggtggtgcgcctcctcgagtccctggacacgagcaatggcggcgg 25619593
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 97.6 bits (49), Expect = 2e-16 Identities = 132/159 (83%), Gaps = 3/159 (1%) Strand = Plus / Minus Query: 1311 aaagatagtacatcgtgatgtgaaaactgaaaatatgctgcttgatacacagcgtaacct 1370 |||||| || ||||| ||||| |||| ||| || ||||| ||||| |||||| ||||| Sbjct: 54989 aaagattgtgcatcgggatgtcaaaagtgagaacatgctacttgacccacagctgaacct 54930 Query: 1371 taagattgctgatttcggtgttgcacgt---gttgaggctcagaatccgaaggatatgac 1427 ||||||||||||||| |||||||| ||| |||||||||||| |||| |||||| |||| Sbjct: 54929 taagattgctgattttggtgttgctcgtctcgttgaggctcaggatcccaaggatttgac 54870 Query: 1428 tggtgcgaccggcacgcttggttacatggccccagaggt 1466 | |||| || || ||||||||||||||||||||||| Sbjct: 54869 acgcacgactggaacacttggttacatggccccagaggt 54831 Score = 69.9 bits (35), Expect = 4e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1165 agagcatgttgtgttgtggtagaatatctcgctggtggcactttgaaacag 1215 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 55225 agagcatgctgtgttgtggtagaatatctcactgggggcacattgaaacag 55175 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcat 1517 |||| |||||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 54666 aggtgcttgatggaaagccatacaacagaaagtgcgatgtttacagtttcggcat 54612 Score = 50.1 bits (25), Expect = 0.034 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1025 gaacatcatttaagcaggaggttgctgtttggcataagctcagccatcc 1073 |||||||| ||||| ||| |||||||||||||||| || ||| |||||| Sbjct: 55616 gaacatcacttaaggaggtggttgctgtttggcatgagttcaaccatcc 55568 Score = 42.1 bits (21), Expect = 8.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| ||| | ||| |||| ||||||||||| |||||||| Sbjct: 54177 atggaggaggtggtgcgcctcctcgagtccctggacacgagcaatggcggcgg 54125
>gb|BT013117.1| Lycopersicon esculentum clone 114407R, mRNA sequence Length = 1844 Score = 95.6 bits (48), Expect = 6e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 1375 attgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcg 1434 ||||||||||| || ||||| || ||||||||| ||||| || || |||||||| | | Sbjct: 1149 attgctgattttggggttgctcgggttgaggcttctaatccaaatgacatgactggggag 1208 Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 || || || ||||| || ||||| || ||||| || |||| || |||||||| |||||| Sbjct: 1209 actggaacccttggatatatggctcccgaggtactcaatggcaatccatacaatagaaaa 1268 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 |||||||| || ||||||||||| ||| ||||||| | ||||| |||||||||||||| Sbjct: 1269 tgtgatgtgtacagttttggcatatgcgtgtgggagatttattgttgtgacatgccatat 1328 Query: 1555 ccagacct 1562 || ||||| Sbjct: 1329 cctgacct 1336
>ref|NM_001062943.1| Oryza sativa (japonica cultivar-group) Os05g0577700 (Os05g0577700) mRNA, complete cds Length = 1513 Score = 81.8 bits (41), Expect = 1e-11 Identities = 149/185 (80%) Strand = Plus / Plus Query: 1375 attgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcg 1434 ||||||||||| |||||||| || |||||||| ||||| | |||||||| || | Sbjct: 879 attgctgattttggtgttgctcggcttgaggcttcaaatcccagtgatatgacaggggaa 938 Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 || ||||| |||||||||||||| || |||||||| | || | ||||||||||| ||| Sbjct: 939 acaggcacccttggttacatggctcctgaggttctcaacggcagtccatacaacaggaaa 998 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || ||||||||||| ||||| ||||| || ||||| | || |||||||| |||||||| Sbjct: 999 tgcgatgtttatagctttgggatttgtttatgggagatatactgctgtgatatgccatat 1058 Query: 1555 ccaga 1559 ||||| Sbjct: 1059 ccaga 1063
>gb|AY224453.1| Oryza sativa (japonica cultivar-group) isolate 23379 putative protein kinase mRNA, complete cds Length = 1149 Score = 75.8 bits (38), Expect = 6e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| |||||||||||||| || |||||||| | || | ||||||||||| ||||| Sbjct: 778 ggcacccttggttacatggctcctgaggttctcaacggcagtccatacaacaggaaatgc 837 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||||||||| ||||| ||||| || ||||| | || |||||||| |||||||| ||| Sbjct: 838 gatgtttatagctttgggatttgtttatgggagatatactgctgtgatatgccatatcca 897 Query: 1558 ga 1559 || Sbjct: 898 ga 899
>dbj|AK107217.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C11, full insert sequence Length = 1513 Score = 73.8 bits (37), Expect = 2e-09 Identities = 148/185 (80%) Strand = Plus / Plus Query: 1375 attgctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcg 1434 ||||||||||| |||||||| || |||||||| ||||| | |||||||| || | Sbjct: 879 attgctgattttggtgttgctcggcttgaggcttcaaatcccagtgatatgacaggggaa 938 Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 || | ||| |||||||||||||| || |||||||| | || | ||||||||||| ||| Sbjct: 939 acagacacccttggttacatggctcctgaggttctcaacggcagtccatacaacaggaaa 998 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || ||||||||||| ||||| ||||| || ||||| | || |||||||| |||||||| Sbjct: 999 tgcgatgtttatagctttgggatttgtttatgggagatatactgctgtgatatgccatat 1058 Query: 1555 ccaga 1559 ||||| Sbjct: 1059 ccaga 1063
>gb|EF014131.1| Synthetic construct flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase (AT3G63260) mRNA, complete cds Length = 1209 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 814 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 873 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 874 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 920 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 317 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 376 Query: 1016 c 1016 | Sbjct: 377 c 377
>ref|NM_202754.1| Arabidopsis thaliana ATMRK1; kinase (ATMRK1) mRNA, complete cds Length = 1490 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 1002 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1061 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1062 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1108 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 505 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 564 Query: 1016 c 1016 | Sbjct: 565 c 565
>ref|NM_116191.2| Arabidopsis thaliana ATMRK1; kinase (ATMRK1) mRNA, complete cds Length = 1645 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 1074 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1133 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1134 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1180 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 577 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 636 Query: 1016 c 1016 | Sbjct: 637 c 637
>gb|AY117337.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA, complete cds Length = 1207 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 814 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 873 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 874 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 920 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 317 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 376 Query: 1016 c 1016 | Sbjct: 377 c 377
>gb|AY080717.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA, complete cds Length = 1591 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 1022 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1081 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1082 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1128 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 525 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 584 Query: 1016 c 1016 | Sbjct: 585 c 585
>gb|AY086480.1| Arabidopsis thaliana clone 253505 mRNA, complete sequence Length = 1591 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 1019 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1078 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1079 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1125 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 522 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 581 Query: 1016 c 1016 | Sbjct: 582 c 582
>dbj|AB006810.1| Arabidopsis thaliana mRNA for ATMRK1, complete cds Length = 1626 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 1073 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1132 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1133 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1179 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 576 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 635 Query: 1016 c 1016 | Sbjct: 636 c 636
>emb|BX822415.1|CNS0A793 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 915 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 974 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 975 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1021 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 419 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 478 Query: 1016 c 1016 | Sbjct: 479 c 479
>emb|BX823523.1|CNS0A4WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1537 Score = 69.9 bits (35), Expect = 4e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 992 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1051 Query: 1504 tatagttttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1052 tatagctttggggtatgcctctgggaaatatactgctgtgacatgcc 1098 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 495 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 554 Query: 1016 c 1016 | Sbjct: 555 c 555
>gb|EF014130.1| Synthetic construct flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase (AT4G14780) mRNA, complete cds Length = 1128 Score = 67.9 bits (34), Expect = 1e-07 Identities = 127/158 (80%) Strand = Plus / Plus Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 ||||| || ||||| |||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 724 accggtactcttggatacatggctcctgaggtcattgatggtaagccatacaacagaagg 783 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || |||||||| || ||||| || || || |||||| |||| ||||| || ||||| || Sbjct: 784 tgcgatgtttacagctttgggatatgtttatgggaaatctactgctgcgatatgccttat 843 Query: 1555 ccagacctaagttttgccgatgtctcttctgctgttgt 1592 || || || || |||| |||||| ||||| || ||||| Sbjct: 844 cctgatcttagctttgtcgatgtttcttccgcggttgt 881 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1049 ctgtttggcataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggg 1106 |||||||||| || |||| |||||| || || || ||||||||||| ||||| ||||| Sbjct: 344 ctgtttggcacaaactcaaccatccaaatgtcacaaagtttgttggagcgtcgatggg 401
>ref|NM_001050217.1| Oryza sativa (japonica cultivar-group) Os01g0641000 (Os01g0641000) mRNA, complete cds Length = 1726 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1294 agctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgctt 1353 |||||||| ||||| | |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 899 agctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctcctt 958 Query: 1354 ga 1355 || Sbjct: 959 ga 960 Score = 67.9 bits (34), Expect = 1e-07 Identities = 199/254 (78%) Strand = Plus / Plus Query: 1378 gctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgacc 1437 |||||||| ||||||||||| |||||||| ||||| | |||||||| |||| || Sbjct: 983 gctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaaca 1042 Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| |||||||||||||| || |||||||| | || | || |||||||| || ||| Sbjct: 1043 ggcacacttggttacatggcacccgaggttctcaacggccatccttacaacaggaagtgt 1102 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||| ||||| ||||| || ||| | ||||| | || ||||| || ||||| || || Sbjct: 1103 gatgtatatagctttggaatctgcctatgggagatatactgctgcgatatgccgtatcct 1162 Query: 1558 gacctaagttttgccgatgtctcttctgctgttgttcaccagaacttgcggccagacata 1617 || || ||||| | || ||| |||| |||||||||| ||||||||| |||| || ||| Sbjct: 1163 gatctgagtttctcagaggtcacttcagctgttgttcgtcagaacttgaggcctgagata 1222 Query: 1618 ccccgttgctgccc 1631 || || |||||||| Sbjct: 1223 ccgcgctgctgccc 1236
>ref|NM_117563.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT4G14780) mRNA, complete cds Length = 1363 Score = 67.9 bits (34), Expect = 1e-07 Identities = 127/158 (80%) Strand = Plus / Plus Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 ||||| || ||||| |||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 881 accggtactcttggatacatggctcctgaggtcattgatggtaagccatacaacagaagg 940 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || |||||||| || ||||| || || || |||||| |||| ||||| || ||||| || Sbjct: 941 tgcgatgtttacagctttgggatatgtttatgggaaatctactgctgcgatatgccttat 1000 Query: 1555 ccagacctaagttttgccgatgtctcttctgctgttgt 1592 || || || || |||| |||||| ||||| || ||||| Sbjct: 1001 cctgatcttagctttgtcgatgtttcttccgcggttgt 1038 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1049 ctgtttggcataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggg 1106 |||||||||| || |||| |||||| || || || ||||||||||| ||||| ||||| Sbjct: 501 ctgtttggcacaaactcaaccatccaaatgtcacaaagtttgttggagcgtcgatggg 558
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1294 agctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgctt 1353 |||||||| ||||| | |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 25754645 agctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctcctt 25754704 Query: 1354 ga 1355 || Sbjct: 25754705 ga 25754706 Score = 50.1 bits (25), Expect = 0.034 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1378 gctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgacc 1437 |||||||| ||||||||||| |||||||| ||||| | |||||||| |||| || Sbjct: 25754729 gctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaaca 25754788 Query: 1438 ggcacgcttggttacatggccccagaggt 1466 ||||| |||||||||||||| || ||||| Sbjct: 25754789 ggcacacttggttacatggcacccgaggt 25754817
>gb|BT006041.1| Arabidopsis thaliana clone U50806 putative kinase (At4g14780) mRNA, complete cds Length = 1126 Score = 67.9 bits (34), Expect = 1e-07 Identities = 127/158 (80%) Strand = Plus / Plus Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 ||||| || ||||| |||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 724 accggtactcttggatacatggctcctgaggtcattgatggtaagccatacaacagaagg 783 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || |||||||| || ||||| || || || |||||| |||| ||||| || ||||| || Sbjct: 784 tgcgatgtttacagctttgggatatgtttatgggaaatctactgctgcgatatgccttat 843 Query: 1555 ccagacctaagttttgccgatgtctcttctgctgttgt 1592 || || || || |||| |||||| ||||| || ||||| Sbjct: 844 cctgatcttagctttgtcgatgtttcttccgcggttgt 881 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1049 ctgtttggcataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggg 1106 |||||||||| || |||| |||||| || || || ||||||||||| ||||| ||||| Sbjct: 344 ctgtttggcacaaactcaaccatccaaatgtcacaaagtttgttggagcgtcgatggg 401
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1294 agctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgctt 1353 |||||||| ||||| | |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 57109 agctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctcctt 57168 Query: 1354 ga 1355 || Sbjct: 57169 ga 57170 Score = 50.1 bits (25), Expect = 0.034 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1378 gctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgacc 1437 |||||||| ||||||||||| |||||||| ||||| | |||||||| |||| || Sbjct: 57193 gctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaaca 57252 Query: 1438 ggcacgcttggttacatggccccagaggt 1466 ||||| |||||||||||||| || ||||| Sbjct: 57253 ggcacacttggttacatggcacccgaggt 57281
>dbj|AK118177.1| Arabidopsis thaliana At4g14780 mRNA for kinase like protein, complete cds, clone: RAFL19-49-L08 Length = 1363 Score = 67.9 bits (34), Expect = 1e-07 Identities = 127/158 (80%) Strand = Plus / Plus Query: 1435 accggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaa 1494 ||||| || ||||| |||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 881 accggtactcttggatacatggctcctgaggtcattgatggtaagccatacaacagaagg 940 Query: 1495 tgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccatac 1554 || |||||||| || ||||| || || || |||||| |||| ||||| || ||||| || Sbjct: 941 tgcgatgtttacagctttgggatatgtttatgggaaatctactgctgcgatatgccttat 1000 Query: 1555 ccagacctaagttttgccgatgtctcttctgctgttgt 1592 || || || || |||| |||||| ||||| || ||||| Sbjct: 1001 cctgatcttagctttgtcgatgtttcttccgcggttgt 1038 Score = 44.1 bits (22), Expect = 2.1 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1049 ctgtttggcataagctcagccatcctaacgttacgaagtttgttggtgcgtctatggg 1106 |||||||||| || |||| |||||| || || || ||||||||||| ||||| ||||| Sbjct: 501 ctgtttggcacaaactcaaccatccaaatgtcacaaagtttgttggagcgtcgatggg 558
>dbj|AK108130.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D09, full insert sequence Length = 1726 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1294 agctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgctt 1353 |||||||| ||||| | |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 899 agctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctcctt 958 Query: 1354 ga 1355 || Sbjct: 959 ga 960 Score = 60.0 bits (30), Expect = 4e-05 Identities = 198/254 (77%) Strand = Plus / Plus Query: 1378 gctgatttcggtgttgcacgtgttgaggctcagaatccgaaggatatgactggtgcgacc 1437 |||||||| ||||||||||| |||||||| ||||| | |||||||| |||| || Sbjct: 983 gctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaaca 1042 Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| |||||||||||||| || |||||||| | || | || |||||||| || ||| Sbjct: 1043 ggcacacttggttacatggcacccgaggttctcaacggccatccttacaacaggaagtgt 1102 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||| ||| | ||||| || ||| | ||||| | || ||||| || ||||| || || Sbjct: 1103 gatgtatatcgctttggaatctgcctatgggagatatactgctgcgatatgccgtatcct 1162 Query: 1558 gacctaagttttgccgatgtctcttctgctgttgttcaccagaacttgcggccagacata 1617 || || ||||| | || ||| |||| |||||||||| ||||||||| |||| || ||| Sbjct: 1163 gatctgagtttctcagaggtcacttcagctgttgttcgtcagaacttgaggcctgagata 1222 Query: 1618 ccccgttgctgccc 1631 || || |||||||| Sbjct: 1223 ccgcgctgctgccc 1236
>gb|EF014128.1| Synthetic construct flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase (AT5G50000) mRNA, complete cds Length = 1191 Score = 65.9 bits (33), Expect = 6e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| ||||| |||||||| || |||||||| |||| || || || || ||||||| Sbjct: 790 ggcacacttggctacatggcgcctgaggttctcaatggaaacccgtataatcgaaaatgc 849 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||| || ||||| || || ||||| ||||| | ||||||||||||||||||||||| Sbjct: 850 gatgtatacagtttcgggatctgcttatgggagatatattgctgtgacatgccataccct 909 Query: 1558 gacct 1562 ||||| Sbjct: 910 gacct 914 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1039 caggaggttgctgtttggcataa 1061 ||||||||||||||||||||||| Sbjct: 397 caggaggttgctgtttggcataa 419
>ref|NM_124379.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT5G50000) mRNA, complete cds Length = 1509 Score = 65.9 bits (33), Expect = 6e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| ||||| |||||||| || |||||||| |||| || || || || ||||||| Sbjct: 890 ggcacacttggctacatggcgcctgaggttctcaatggaaacccgtataatcgaaaatgc 949 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||| || ||||| || || ||||| ||||| | ||||||||||||||||||||||| Sbjct: 950 gatgtatacagtttcgggatctgcttatgggagatatattgctgtgacatgccataccct 1009 Query: 1558 gacct 1562 ||||| Sbjct: 1010 gacct 1014 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1039 caggaggttgctgtttggcataa 1061 ||||||||||||||||||||||| Sbjct: 497 caggaggttgctgtttggcataa 519
>emb|BX822407.1|CNS0A7SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1487 Score = 65.9 bits (33), Expect = 6e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagt 1509 |||||||| |||||||||||||| || || || |||||||| ||||| ||||| ||||| Sbjct: 1020 tacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtctatagc 1079 Query: 1510 tttggcatttgcttgtgggaagtctattgctgtgacatgcc 1550 ||||| | ||| | |||||| | || |||||||||||||| Sbjct: 1080 tttggggtatgcctctgggaaatatactgctgtgacatgcc 1120
>gb|AY107676.1| Zea mays PCO061481 mRNA sequence Length = 1045 Score = 65.9 bits (33), Expect = 6e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 1441 acgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgat 1500 ||||||||||||||||| || |||||||| |||| || || |||||||| ||||| ||| Sbjct: 456 acgcttggttacatggcacctgaggttctcaatggaaatccctacaacaggaaatgcgat 515 Query: 1501 gtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccata 1553 ||||| || || || || || |||||||| | || |||||||| |||||||| Sbjct: 516 gtttacagcttcgggatctgtttgtgggagatatactgctgtgatatgccata 568 Score = 52.0 bits (26), Expect = 0.009 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1294 agctatctacactccagaaagatagtacatcgtgatgtgaaaactgaaaatatgctgctt 1353 |||||||| || |||| ||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 309 agctatctccattccaagaagattgtgcaccgtgatgtgaagactgaaaatatgcttctt 368 Query: 1354 ga 1355 || Sbjct: 369 ga 370
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1480 ccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgc 1539 ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| | || ||| Sbjct: 68226 ccatacaacaggaaatgcgatgtttatagctttgggatttgtttatgggagatatactgc 68167 Query: 1540 tgtgacatgccatacccaga 1559 ||||| |||||||| ||||| Sbjct: 68166 tgtgatatgccatatccaga 68147
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1480 ccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgc 1539 ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| | || ||| Sbjct: 28540533 ccatacaacaggaaatgcgatgtttatagctttgggatttgtttatgggagatatactgc 28540474 Query: 1540 tgtgacatgccatacccaga 1559 ||||| |||||||| ||||| Sbjct: 28540473 tgtgatatgccatatccaga 28540454
>emb|BX824799.1|CNS0A6RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1030 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagt 1509 ||||| || |||||||| || ||| | |||||||||||||||| ||||||||| | || Sbjct: 556 tacatcgctccagaggtcctcgatcgcaaaccatacaacagaagatgtgatgtccacagc 615 Query: 1510 tttggcatttgcttgtggga 1529 |||||||| ||||||||||| Sbjct: 616 tttggcatatgcttgtggga 635
>emb|CT987310.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 742 Score = 61.9 bits (31), Expect = 9e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 1462 gaggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgc 1521 ||||| || ||||| || ||||| || |||||||| ||||| || ||||| ||||| ||| Sbjct: 5 gaggtactagatggaaacccatataatagaaaatgcgatgtctacagtttcggcatctgc 64 Query: 1522 ttgtgggaagtctattgctgtgacatgccatacccagacctaagttt 1568 | |||||| | ||||| || |||||||||||||| ||||| ||||| Sbjct: 65 ctatgggaaatatattgttgcgacatgccataccctgaccttagttt 111
>gb|AY085263.1| Arabidopsis thaliana clone 142106 mRNA, complete sequence Length = 1509 Score = 61.9 bits (31), Expect = 9e-06 Identities = 101/125 (80%) Strand = Plus / Plus Query: 1438 ggcacgcttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgt 1497 ||||| ||||| |||||||| || |||||||| |||| || || || || ||||||| Sbjct: 890 ggcacacttggctacatggcgcctgaggttctcaatggaaacccgtataatcgaaaatgc 949 Query: 1498 gatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgccataccca 1557 ||||| || ||||| || || ||||| ||||| | ||||||||||| ||||||||||| Sbjct: 950 gatgtatacagtttcgggatctgcttatgggagatatattgctgtgasatgccataccct 1009 Query: 1558 gacct 1562 ||||| Sbjct: 1010 gacct 1014 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1039 caggaggttgctgtttggcataa 1061 ||||||||||||||||||||||| Sbjct: 497 caggaggttgctgtttggcataa 519
>dbj|AB026650.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPF21 Length = 64569 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Minus Query: 1490 gaaaatgtgatgtttatagttttggcatttgcttgtgggaagtctattgctgtgacatgc 1549 ||||||| ||||| || ||||| || || ||||| ||||| | |||||||||||||||| Sbjct: 2641 gaaaatgcgatgtatacagtttcgggatctgcttatgggagatatattgctgtgacatgc 2582 Query: 1550 catacccagacct 1562 ||||||| ||||| Sbjct: 2581 cataccctgacct 2569 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1039 caggaggttgctgtttggcataa 1061 ||||||||||||||||||||||| Sbjct: 3329 caggaggttgctgtttggcataa 3307
>emb|BX823676.1|CNS0A6O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 956 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 1015 ||||||||||||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 499 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 558 Query: 1016 c 1016 | Sbjct: 559 c 559 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1444 cttggttacatggccccagaggttcttgatggtaaaccatacaacagaaaatgtgatgtt 1503 ||||| |||||||| |||||||||||||| || || || |||||||| ||||| ||||| Sbjct: 996 cttggatacatggcaccagaggttcttgaaggaaagccttacaacaggaaatgcgatgtc 1055 Query: 1504 tatag 1508 ||||| Sbjct: 1056 tatag 1060
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 56.0 bits (28), Expect = 6e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 1469 ttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtggg 1528 |||||||||| ||||||||||||| || |||||||| || ||||| || || || |||| Sbjct: 59116 ttgatggtaagccatacaacagaaggtgcgatgtttacagctttgggatatgtttatggg 59175 Query: 1529 aagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctcttctgctg 1588 || |||| ||||| || ||||| || || || || || |||| |||||| ||||| || | Sbjct: 59176 aaatctactgctgcgatatgccttatcctgatcttagctttgtcgatgtttcttccgcgg 59235 Query: 1589 ttgt 1592 |||| Sbjct: 59236 ttgt 59239
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 56.0 bits (28), Expect = 6e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 1469 ttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtggg 1528 |||||||||| ||||||||||||| || |||||||| || ||||| || || || |||| Sbjct: 197546 ttgatggtaagccatacaacagaaggtgcgatgtttacagctttgggatatgtttatggg 197605 Query: 1529 aagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctcttctgctg 1588 || |||| ||||| || ||||| || || || || || |||| |||||| ||||| || | Sbjct: 197606 aaatctactgctgcgatatgccttatcctgatcttagctttgtcgatgtttcttccgcgg 197665 Query: 1589 ttgt 1592 |||| Sbjct: 197666 ttgt 197669
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 56.0 bits (28), Expect = 6e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 1469 ttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgcttgtggg 1528 |||||||||| ||||||||||||| || |||||||| || ||||| || || || |||| Sbjct: 4570 ttgatggtaagccatacaacagaaggtgcgatgtttacagctttgggatatgtttatggg 4629 Query: 1529 aagtctattgctgtgacatgccatacccagacctaagttttgccgatgtctcttctgctg 1588 || |||| ||||| || ||||| || || || || || |||| |||||| ||||| || | Sbjct: 4630 aaatctactgctgcgatatgccttatcctgatcttagctttgtcgatgtttcttccgcgg 4689 Query: 1589 ttgt 1592 |||| Sbjct: 4690 ttgt 4693
>emb|CT982705.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 502 Score = 54.0 bits (27), Expect = 0.002 Identities = 150/191 (78%) Strand = Plus / Plus Query: 1561 ctaagttttgccgatgtctcttctgctgttgttcaccagaacttgcggccagacataccc 1620 |||||||||||||||||||| ||||| || ||| ||||||||||| || || || || Sbjct: 24 ctaagttttgccgatgtctcatctgcagtggttttgcagaacttgcgacctgaaattcct 83 Query: 1621 cgttgctgcccaagtgcgtttgcgaacattatgcgcaagtgctgggatggaaaccctgat 1680 || |||||||| | || | || ||||| ||||||| || ||||||| ||||| || Sbjct: 84 cgatgctgccctggcgctctggcaaacatcatgcgcagatgttgggatgccaacccagac 143 Query: 1681 aaacgccctgacatggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggc 1740 ||||| | || ||||| |||||||| || | |||||||| ||||||| ||||||||| Sbjct: 144 aaacgtctggaaatggatgaggtggtccatttgttggaggccatcgacaccagcaaaggc 203 Query: 1741 ggcggtatgat 1751 || || ||||| Sbjct: 204 ggagggatgat 214
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 3696397 tacatggccccagaggttcttgatg 3696421
>ref|NM_165559.1| Drosophila melanogaster saxophone CG1891-RB, transcript variant B (sax), mRNA Length = 2719 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1664 tacatggccccagaggttcttgatg 1688
>ref|NM_078928.2| Drosophila melanogaster saxophone CG1891-RA, transcript variant A (sax), mRNA Length = 2424 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1369 tacatggccccagaggttcttgatg 1393
>gb|AY058363.1| Drosophila melanogaster GH13369 full length cDNA Length = 2734 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1664 tacatggccccagaggttcttgatg 1688
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 62800 tacatggccccagaggttcttgatg 62776
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 50.1 bits (25), Expect = 0.034 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1693 atggacgaggtggtgcagctcatggaggccctcgacacgagcaaaggcggcgg 1745 ||||| |||||||||| | | ||||||| |||||||||||||| |||||||| Sbjct: 54775 atggaggaggtggtgcggatgctggaggcgctcgacacgagcaatggcggcgg 54827
>gb|L33790.1|DROBKR4A Drosophila melanogaster (clone 5-2) receptor protein serine/threonine kinase (Brk43E) mRNA, complete cds Length = 2413 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1361 tacatggccccagaggttcttgatg 1385
>gb|U11441.1|DMU11441 Drosophila melanogaster serine/threonine kinase receptor SAX (sax) mRNA, complete cds Length = 2410 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1357 tacatggccccagaggttcttgatg 1381
>gb|L33476.1|DROSAPR Drosophila melanogaster saxophone protein mRNA, complete cds Length = 2361 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1309 tacatggccccagaggttcttgatg 1333
>gb|U05209.1|DMU05209 Drosophila melanogaster saxophone serine-threonine kinase receptor (sax) mRNA, complete cds Length = 2425 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1450 tacatggccccagaggttcttgatg 1474 ||||||||||||||||||||||||| Sbjct: 1369 tacatggccccagaggttcttgatg 1393
>ref|NM_001070365.1| Oryza sativa (japonica cultivar-group) Os09g0544300 (Os09g0544300) mRNA, complete cds Length = 2262 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1370 ttaagattgctgatttcggtgttgcacgtgtt 1401 ||||| |||||||||| ||||||||||||||| Sbjct: 1402 ttaaggttgctgattttggtgttgcacgtgtt 1433
>gb|AC189449.1| Brassica rapa subsp. pekinensis clone KBrB071M14, complete sequence Length = 36889 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 962 cagtgaagctgttggattggggagaagatggt 993 |||||||| |||| |||||||||||||||||| Sbjct: 36552 cagtgaaggtgttagattggggagaagatggt 36521
>gb|DQ530348.1| Gallid herpesvirus 2 strain CVI988, complete genome Length = 178311 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 160160 tacatcgtgatgtaaaaactgaaaatat 160187
>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence Length = 131960 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2128 ttggataccggtacatgtttttga 2151 |||||||||||||||||||||||| Sbjct: 63866 ttggataccggtacatgtttttga 63843
>gb|AF147806.2| Gallid herpesvirus 2, complete genome Length = 174077 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 156390 tacatcgtgatgtaaaaactgaaaatat 156417
>gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete genome Length = 170950 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 169671 tacatcgtgatgtaaaaactgaaaatat 169698
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1370 ttaagattgctgatttcggtgttgcacgtgtt 1401 ||||| |||||||||| ||||||||||||||| Sbjct: 21192173 ttaaggttgctgattttggtgttgcacgtgtt 21192204
>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2 Length = 75106 Score = 48.1 bits (24), Expect = 0.13 Identities = 72/88 (81%) Strand = Plus / Minus Query: 1463 aggttcttgatggtaaaccatacaacagaaaatgtgatgtttatagttttggcatttgct 1522 |||||||||| || || || |||||||| ||||| ||||| ||||| ||||| | ||| Sbjct: 41212 aggttcttgaaggaaagccttacaacaggaaatgcgatgtctatagctttggggtatgcc 41153 Query: 1523 tgtgggaagtctattgctgtgacatgcc 1550 | |||||| | || |||||||||||||| Sbjct: 41152 tctgggaaatatactgctgtgacatgcc 41125 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Minus Query: 961 gcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactac 1016 |||||||| |||| ||||||||||||||||||| |||||| ||| |||||||| Sbjct: 42005 gcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaactac 41950
>gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome Length = 177874 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 158579 tacatcgtgatgtaaaaactgaaaatat 158606
>dbj|AK072690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139F03, full insert sequence Length = 2263 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1370 ttaagattgctgatttcggtgttgcacgtgtt 1401 ||||| |||||||||| ||||||||||||||| Sbjct: 1403 ttaaggttgctgattttggtgttgcacgtgtt 1434
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1370 ttaagattgctgatttcggtgttgcacgtgtt 1401 ||||| |||||||||| ||||||||||||||| Sbjct: 62930 ttaaggttgctgattttggtgttgcacgtgtt 62961
>gb|M80595.1|HSMUSORFS Gallid herpes virus type 1 short unique region with complete ORF's (US420, US537, US639, US1206, US441, US426, US1053, US384, US453), and 5' end of ORF US1141 Length = 8936 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 6510 tacatcgtgatgtaaaaactgaaaatat 6537
>gb|L22174.1|HSKUSAA Marek's disease virus (MDV) regulatory protein (US1) virion protein (US10), protein kinase (US3), membrane glycoproteins (US6, US7, US8) genes, complete cds Length = 11286 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1319 tacatcgtgatgtgaaaactgaaaatat 1346 ||||||||||||| |||||||||||||| Sbjct: 5657 tacatcgtgatgtaaaaactgaaaatat 5684
>ref|NM_001054027.1| Oryza sativa (japonica cultivar-group) Os02g0629400 (Os02g0629400) mRNA, complete cds Length = 3528 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1496 gtgatgtttatagttttggcatt 1518 ||||||||||||||||||||||| Sbjct: 3067 gtgatgtttatagttttggcatt 3089
>gb|AC148970.3| Medicago truncatula chromosome 2 BAC clone mth2-74j13, complete sequence Length = 83100 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1492 aaatgtgatgtttatagttttgg 1514 ||||||||||||||||||||||| Sbjct: 17972 aaatgtgatgtttatagttttgg 17950
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1496 gtgatgtttatagttttggcatt 1518 ||||||||||||||||||||||| Sbjct: 25195128 gtgatgtttatagttttggcatt 25195106 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ctggttcctcgcctcgccgtt 335 ||||||||||||||||||||| Sbjct: 19778270 ctggttcctcgcctcgccgtt 19778250
>gb|AC130275.16| Medicago truncatula clone mth1-63a17, complete sequence Length = 90599 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1492 aaatgtgatgtttatagttttgg 1514 ||||||||||||||||||||||| Sbjct: 19084 aaatgtgatgtttatagttttgg 19062
>gb|AF350266.1|AF350266 Argiope trifasciata major ampullate spidroin 1 (MaSp1) mRNA, partial cds Length = 1947 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcca 66 ||||||||||||||||||||||| Sbjct: 13 gcagcagcagcagccggtggcca 35 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcca 66 ||||||||||||||||||||||| Sbjct: 475 gcagcagcagcagccggtggcca 497 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcca 66 ||||||||||||||||||||||| Sbjct: 706 gcagcagcagcagccggtggcca 728 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcca 66 ||||||||||||||||||||||| Sbjct: 937 gcagcagcagcagccggtggcca 959 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcca 66 ||||||||||||||||||||||| Sbjct: 1168 gcagcagcagcagccggtggcca 1190 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cagcagcagcagccggtggcca 66 |||||||||||||||||||||| Sbjct: 245 cagcagcagcagccggtggcca 266
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1496 gtgatgtttatagttttggcatt 1518 ||||||||||||||||||||||| Sbjct: 95521 gtgatgtttatagttttggcatt 95499
>dbj|AK068495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157D09, full insert sequence Length = 3530 Score = 46.1 bits (23), Expect = 0.53 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1496 gtgatgtttatagttttggcatt 1518 ||||||||||||||||||||||| Sbjct: 3069 gtgatgtttatagttttggcatt 3091
>gb|DQ672264.1| Nicotiana tabacum DSK2 mRNA, complete cds Length = 1385 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1497 tgatgtttatagttttggcatt 1518 |||||||||||||||||||||| Sbjct: 1024 tgatgtttatagttttggcatt 1045
>ref|XM_001088624.1| PREDICTED: Macaca mulatta similar to TPA regulated locus, transcript variant 2 (LOC696262), mRNA Length = 1854 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcc 65 |||||||||||||||||||||| Sbjct: 362 gcagcagcagcagccggtggcc 383
>ref|XM_001088728.1| PREDICTED: Macaca mulatta similar to TPA regulated locus, transcript variant 3 (LOC696262), mRNA Length = 1854 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggcc 65 |||||||||||||||||||||| Sbjct: 362 gcagcagcagcagccggtggcc 383
>gb|AC120180.19| Mus musculus chromosome 1, clone RP24-499I2, complete sequence Length = 183516 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1818 agcactcttctccctttggctatgca 1843 ||||||||||||||| |||||||||| Sbjct: 118717 agcactcttctccctgtggctatgca 118692
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1326 tgatgtgaaaactgaaaatatg 1347 |||||||||||||||||||||| Sbjct: 2536363 tgatgtgaaaactgaaaatatg 2536342
>ref|NM_070632.2| Caenorhabditis elegans Y116A8C.32 (Y116A8C.32) mRNA, complete cds Length = 2440 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1695 ggacgaggtggtgcagctcatggagg 1720 ||||||||||||| |||||||||||| Sbjct: 1600 ggacgaggtggtggagctcatggagg 1625
>emb|BX248395.9| Zebrafish DNA sequence from clone CH211-213A13 in linkage group 22, complete sequence Length = 206668 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2003 tctgatgttgtttctgtaatagtata 2028 ||||||||||||| |||||||||||| Sbjct: 142300 tctgatgttgtttttgtaatagtata 142275
>emb|AJ243905.1|CEL243905 Caenorhabditis elegans mRNA for SF1 protein (sf1 gene) Length = 2440 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1695 ggacgaggtggtgcagctcatggagg 1720 ||||||||||||| |||||||||||| Sbjct: 1600 ggacgaggtggtggagctcatggagg 1625
>gb|AY108424.1| Zea mays PCO149843 mRNA sequence Length = 1330 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgtt 1401 |||||||||| ||||||||||||||| Sbjct: 753 ttgctgattttggtgttgcacgtgtt 778
>gb|AC171647.3| Rhesus Macaque BAC CH250-482O21 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 123862 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 caggcgccaggcagcagcagca 55 |||||||||||||||||||||| Sbjct: 83056 caggcgccaggcagcagcagca 83077
>emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, complete sequence Length = 260341 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1695 ggacgaggtggtgcagctcatggagg 1720 ||||||||||||| |||||||||||| Sbjct: 205658 ggacgaggtggtggagctcatggagg 205633
>ref|XM_001180788.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA (LOC575541), mRNA Length = 4755 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 801 ggagcaacagctcaacaagaa 821 ||||||||||||||||||||| Sbjct: 4422 ggagcaacagctcaacaagaa 4442
>ref|XM_775936.2| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA (LOC575541), mRNA Length = 4755 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 801 ggagcaacagctcaacaagaa 821 ||||||||||||||||||||| Sbjct: 4422 ggagcaacagctcaacaagaa 4442
>ref|NM_001065152.1| Oryza sativa (japonica cultivar-group) Os06g0724900 (Os06g0724900) mRNA, complete cds Length = 1957 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgt 1400 |||||||||| |||||||||||||| Sbjct: 1311 ttgctgattttggtgttgcacgtgt 1335
>ref|NM_001057782.1| Oryza sativa (japonica cultivar-group) Os03g0745700 (Os03g0745700) mRNA, complete cds Length = 1224 Score = 42.1 bits (21), Expect = 8.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 927 cgtctaccgcggcacctatgatggccagcaagtcgcagtgaagctgttggattgggg 983 |||||||||||||||||| || ||||| | ||||| |||||| || |||| ||||| Sbjct: 312 cgtctaccgcggcacctacgacggccatgacgtcgccgtgaaggtgctggactgggg 368
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 10447249 gttacatggccccagaggtgcttga 10447225
>gb|DQ792970.1| Eleusine indica fruitful-like MADS-box transcription factor (FUL2) mRNA, partial cds Length = 1009 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 gccaggcagcagcagcagccg 59 ||||||||||||||||||||| Sbjct: 433 gccaggcagcagcagcagccg 453
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 771 gatcgatctcaccagcctcga 791 ||||||||||||||||||||| Sbjct: 4462364 gatcgatctcaccagcctcga 4462344
>ref|XM_633277.1| Dictyostelium discoideum AX4 putative protein serine/threonine kinase (samkB) mRNA, complete cds Length = 1782 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1490 gaaaatgtgatgtttatagttttgg 1514 ||||||||||| ||||||||||||| Sbjct: 1106 gaaaatgtgatatttatagttttgg 1130
>gb|AC167421.2| Mus musculus BAC clone RP23-143K19 from chromosome 3, complete sequence Length = 194311 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1490 gaaaatgtgatgtttatagtt 1510 ||||||||||||||||||||| Sbjct: 120809 gaaaatgtgatgtttatagtt 120789
>gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, complete sequence Length = 214392 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 tttcccacccagcttcctccc 355 ||||||||||||||||||||| Sbjct: 97463 tttcccacccagcttcctccc 97443
>gb|BT013663.1| Lycopersicon esculentum clone 132482R, mRNA sequence Length = 1868 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 1173 gatgtttatagttttggcatt 1193
>gb|AC133906.9| Mus musculus chromosome 14, clone RP24-230P12, complete sequence Length = 176220 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 agcacagcagtaaacaaatcc 88 ||||||||||||||||||||| Sbjct: 10341 agcacagcagtaaacaaatcc 10321
>ref|NM_169591.1| Drosophila melanogaster punt CG7904-RA (put), mRNA Length = 2715 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 1572 gttacatggccccagaggtgcttga 1596
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ccgtcagctccacctctgctg 526 ||||||||||||||||||||| Sbjct: 1384891 ccgtcagctccacctctgctg 1384871
>gb|AC154689.2| Mus musculus BAC clone RP24-329P8 from chromosome 14, complete sequence Length = 124803 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 agcacagcagtaaacaaatcc 88 ||||||||||||||||||||| Sbjct: 62745 agcacagcagtaaacaaatcc 62765
>ref|XM_755885.1| Ustilago maydis 521 hypothetical protein (UM04831.1) partial mRNA Length = 996 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcagcagcagcagccggtggc 64 ||||||||||||||||||||| Sbjct: 129 gcagcagcagcagccggtggc 149
>gb|AC118558.2| Homo sapiens chromosome 1 clone RP11-524M5, complete sequence Length = 51825 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1388 gtgttgcacgtgttgaggctcagaa 1412 |||||||| |||||||||||||||| Sbjct: 51206 gtgttgcaggtgttgaggctcagaa 51182
>dbj|AK078585.1| Mus musculus 11 days embryo gonad cDNA, RIKEN full-length enriched library, clone:7030410F13 product:unclassifiable, full insert sequence Length = 2797 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1490 gaaaatgtgatgtttatagtt 1510 ||||||||||||||||||||| Sbjct: 2269 gaaaatgtgatgtttatagtt 2249
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 1397651 gatgtttatagttttggcatt 1397631 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 1442366 gatgtttatagttttggcatt 1442346
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgt 1400 |||||||||| |||||||||||||| Sbjct: 30306198 ttgctgattttggtgttgcacgtgt 30306222
>emb|AL161637.13| Human DNA sequence from clone RP3-393B19 on chromosome 1p33-34.3 Contains a CpG island, complete sequence Length = 101954 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1388 gtgttgcacgtgttgaggctcagaa 1412 |||||||| |||||||||||||||| Sbjct: 1656 gtgttgcaggtgttgaggctcagaa 1680
>gb|AY060399.1| Drosophila melanogaster LD31893 full length cDNA Length = 2493 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 1332 gttacatggccccagaggtgcttga 1356
>gb|AC007809.8|AC007809 Drosophila melanogaster, chromosome 3R, region 88C-88C, BAC clone BACR45M03, complete sequence Length = 183439 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 101084 gttacatggccccagaggtgcttga 101060
>emb|CR860423.1| Pongo pygmaeus mRNA; cDNA DKFZp459F0223 (from clone DKFZp459F0223) Length = 1531 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 ccaggcgccaggcagcagcagcagc 57 |||||||| |||||||||||||||| Sbjct: 36 ccaggcgcgaggcagcagcagcagc 60
>gb|AC140312.5| Mus musculus BAC clone RP23-423L24 from chromosome 3, complete sequence Length = 200387 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1490 gaaaatgtgatgtttatagtt 1510 ||||||||||||||||||||| Sbjct: 30025 gaaaatgtgatgtttatagtt 30005
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 727 aggaccgggagcttggggagcagcg 751 |||||||||||||||| |||||||| Sbjct: 4557121 aggaccgggagcttggcgagcagcg 4557097
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgt 1400 |||||||||| |||||||||||||| Sbjct: 172533 ttgctgattttggtgttgcacgtgt 172557
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgt 1400 |||||||||| |||||||||||||| Sbjct: 52793 ttgctgattttggtgttgcacgtgt 52817
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ctggttcctcgcctcgccgtt 335 ||||||||||||||||||||| Sbjct: 135028 ctggttcctcgcctcgccgtt 135008
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ctggttcctcgcctcgccgtt 335 ||||||||||||||||||||| Sbjct: 86821 ctggttcctcgcctcgccgtt 86801
>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1126_D10 Length = 90631 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 90008 gatgtttatagttttggcatt 89988
>dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1499_A07 Length = 132146 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 7556 gatgtttatagttttggcatt 7536 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1498 gatgtttatagttttggcatt 1518 ||||||||||||||||||||| Sbjct: 52271 gatgtttatagttttggcatt 52251
>gb|AF082892.1|AF082892 Solanum tuberosum cystathionine gamma-synthase isoform 2 (CgS2) mRNA, complete cds; chloroplast gene for chloroplast product Length = 1877 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1990 cttcctatagcagtctgatgttgtt 2014 ||||||||||||||||| ||||||| Sbjct: 845 cttcctatagcagtctgttgttgtt 821
>dbj|AK073747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K18, full insert sequence Length = 1961 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1376 ttgctgatttcggtgttgcacgtgt 1400 |||||||||| |||||||||||||| Sbjct: 1314 ttgctgattttggtgttgcacgtgt 1338
>gb|L38495.1|DROPUNT Drosophila melanogaster punt receptor serine/threonine kinase (punt) mRNA, complete cds Length = 2687 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 1549 gttacatggccccagaggtgcttga 1573
>emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on chromosome 2, complete sequence Length = 192715 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 tttcccacccagcttcctccc 355 ||||||||||||||||||||| Sbjct: 102051 tttcccacccagcttcctccc 102031
>dbj|AB001486.1| Chlamydomonas reinhardtii zys1B gene, complete cds Length = 2987 Score = 42.1 bits (21), Expect = 8.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 agcagcagcagccggtggcca 66 ||||||||||||||||||||| Sbjct: 17 agcagcagcagccggtggcca 37
>gb|AC099795.2| Homo sapiens chromosome 1 clone RP5-848E13, complete sequence Length = 120556 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1388 gtgttgcacgtgttgaggctcagaa 1412 |||||||| |||||||||||||||| Sbjct: 120212 gtgttgcaggtgttgaggctcagaa 120236
>gb|L22176.1|DROACTREC Drosophila melanogaster activin receptor mRNA, complete cds Length = 2657 Score = 42.1 bits (21), Expect = 8.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1448 gttacatggccccagaggttcttga 1472 ||||||||||||||||||| ||||| Sbjct: 1519 gttacatggccccagaggtgcttga 1543 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 328,456,748 Number of extensions: 18651994 Number of successful extensions: 109181 Number of sequences better than 10.0: 135 Number of HSP's gapped: 109156 Number of HSP's successfully gapped: 207 Length of query: 2172 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2149 Effective length of database: 18,503,978,556 Effective search space: 39765049916844 Effective search space used: 39765049916844 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)