ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf126c15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121759:Os04g0508100 | 109 | 1e-24 | 2 | AK122159:Os01g0644000 | 30 | 1.1 | 3 | AK063835:Os01g0644000 | 30 | 1.1 | 4 | Os02g0123300:Os02g0123300 | 30 | 1.9 | 5 | AK101000:Os07g0124500 | 30 | 1.9 | 6 | AK070529:Os07g0124500 | 30 | 1.9 | 7 | AK101875:Os11g0572100 | 27 | 9.4 | 8 | AK070564:Os11g0572100 | 27 | 9.4 | 9 | AB109200:Os11g0572100 | 27 | 9.4 | 10 | Os08g0431200:Os08g0431200 | 27 | 9.5 |
|---|
>AK121759:Os04g0508100 | Length = 71 Score = 109 bits (273), Expect = 1e-24 Identities = 54/71 (76%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = +3 Query: 114 MAGGGT-FSRALSYVVNEFLVEGLANNRAFQRFAVRTNKTLENLSTKAKQVREEVSEQFK 290 MAGGG F R LSYVVNEF+VEGLANNR FQRFAVRTNK+LENLS+KAK+VREE+SEQ++ Sbjct: 1 MAGGGNLFGRVLSYVVNEFIVEGLANNRTFQRFAVRTNKSLENLSSKAKEVREELSEQWR 60 Query: 291 DARGPDDRFKQ 323 ++RG DD F+Q Sbjct: 61 NSRGNDDHFRQ 71
>AK122159:Os01g0644000 | Length = 130 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/84 (27%), Positives = 40/84 (47%) Frame = +3 Query: 63 VACLRPLREVSPLHNSAMAGGGTFSRALSYVVNEFLVEGLANNRAFQRFAVRTNKTLENL 242 V C R + + +H S + + ALSY+ + F+ L A R + + NK Sbjct: 33 VTCCRH-NQATTVHESRLTSSLSRRDALSYMSSAFIATLLVAGPAEARTSRQENK----- 86 Query: 243 STKAKQVREEVSEQFKDARGPDDR 314 ++VRE++ + + A GPDD+ Sbjct: 87 ----RKVREKLEKLREKALGPDDK 106
>AK063835:Os01g0644000 | Length = 130 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/84 (27%), Positives = 40/84 (47%) Frame = +3 Query: 63 VACLRPLREVSPLHNSAMAGGGTFSRALSYVVNEFLVEGLANNRAFQRFAVRTNKTLENL 242 V C R + + +H S + + ALSY+ + F+ L A R + + NK Sbjct: 33 VTCCRH-NQATTVHESRLTSSLSRRDALSYMSSAFIATLLVAGPAEARTSRQENK----- 86 Query: 243 STKAKQVREEVSEQFKDARGPDDR 314 ++VRE++ + + A GPDD+ Sbjct: 87 ----RKVREKLEKLREKALGPDDK 106
>Os02g0123300:Os02g0123300 | Length = 984 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = +3 Query: 153 VVNEFLVEGLANNRAFQRFAVRTNKTLENLSTKAKQVREEVSEQFKDARGPDDRFK 320 ++ +FL E LAN A ++ + K L + K K+ ++ ++ R +RF+ Sbjct: 182 LLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENLIQECREHPERFE 237
>AK101000:Os07g0124500 | Length = 936 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = +3 Query: 153 VVNEFLVEGLANNRAFQRFAVRTNKTLENLSTKAKQVREEVSEQFKDARGPDDRFK 320 ++ +FL E LAN A ++ + K L + K K+ ++ ++ R +RF+ Sbjct: 126 LLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENLIQECREHPERFE 181
>AK070529:Os07g0124500 | Length = 936 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = +3 Query: 153 VVNEFLVEGLANNRAFQRFAVRTNKTLENLSTKAKQVREEVSEQFKDARGPDDRFK 320 ++ +FL E LAN A ++ + K L + K K+ ++ ++ R +RF+ Sbjct: 126 LLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENLIQECREHPERFE 181
>AK101875:Os11g0572100 | Length = 1021 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = -3 Query: 218 PHSKPLEGTVVGEAL--------HEELVDDVAQRPAEGAAAGHGGIVERGNFAKGAEA 69 P SK L+G EA +E+ +D+ A+ P++ + +G G RG +GA A Sbjct: 132 PPSKKLKGASTAEAHGKTGLDDDNEDKMDEDAKTPSKASGSGRGRGRGRGRGGRGAGA 189
>AK070564:Os11g0572100 | Length = 1021 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = -3 Query: 218 PHSKPLEGTVVGEAL--------HEELVDDVAQRPAEGAAAGHGGIVERGNFAKGAEA 69 P SK L+G EA +E+ +D+ A+ P++ + +G G RG +GA A Sbjct: 132 PPSKKLKGASTAEAHGKTGLDDDNEDKMDEDAKTPSKASGSGRGRGRGRGRGGRGAGA 189
>AB109200:Os11g0572100 | Length = 1021 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = -3 Query: 218 PHSKPLEGTVVGEAL--------HEELVDDVAQRPAEGAAAGHGGIVERGNFAKGAEA 69 P SK L+G EA +E+ +D+ A+ P++ + +G G RG +GA A Sbjct: 132 PPSKKLKGASTAEAHGKTGLDDDNEDKMDEDAKTPSKASGSGRGRGRGRGRGGRGAGA 189
>Os08g0431200:Os08g0431200 | Length = 882 Score = 27.3 bits (59), Expect = 9.5 Identities = 9/24 (37%), Positives = 15/24 (62%) Frame = -1 Query: 322 CLKRSSGPRASLNCSDTSSLTCLA 251 C ++S G A +NC D +TC++ Sbjct: 333 CPEKSDGENAEINCHDGLEITCIS 356 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,964,052 Number of extensions: 372611 Number of successful extensions: 1119 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1119 Number of HSP's successfully gapped: 10 Length of query: 223 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 126 Effective length of database: 11,515,878 Effective search space: 1451000628 Effective search space used: 1451000628 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
