ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf126c15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q50103:MNTH_MYCLE Probable manganese transport protein mntH - My... 30 6.3
2Q7TQC7:GPTC2_MOUSE G patch domain-containing protein 2 - Mus mus... 30 8.1

>Q50103:MNTH_MYCLE Probable manganese transport protein mntH - Mycobacterium leprae|
          Length = 426
 Score = 30.4 bits (67), Expect = 6.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 482 TNSRGETLLGWASVLQISMLNVVL 553
           TN    T+LGWA  + +S+LNVVL
Sbjct: 396 TNHPATTVLGWAVAILVSLLNVVL 419



to top

>Q7TQC7:GPTC2_MOUSE G patch domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 527

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
 Frame = -3

Query: 227 LVGPHSKPLEGTVVGEALH-----EELVDDVAQRPAEGAAAGHGGIVERGNFAK 81
           + G   +P  GT  G++ H     EELV D+     E +    GG  E G  ++
Sbjct: 1   MFGADGRPAIGTAAGKSWHFSRTMEELVHDLVSALEESSEQARGGFAETGEHSR 54


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 108,519,795
Number of extensions: 2118446
Number of successful extensions: 5272
Number of sequences better than 10.0: 2
Number of HSP's gapped: 5272
Number of HSP's successfully gapped: 2
Length of query: 223
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 114
Effective length of database: 70,788,284
Effective search space: 8069864376
Effective search space used: 8069864376
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top