ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf123i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK103183:Os07g0588800 549 e-156
2AK070635:Os07g0588800 540 e-154
3AK063431:Os03g0107400 32 1.1
4Os02g0109400:Os02g0109400 30 2.5
5AK063269:Os01g0765500 30 4.2
6AK110286: 29 5.5
7Os06g0320200:Os06g0320200 29 7.2
8Os09g0278300:Os09g0278300 28 9.4
9AK102414:Os02g0435000 28 9.4
10AK060832:Os02g0435000 28 9.4

>AK103183:Os07g0588800 |
          Length = 306
 Score =  549 bits (1415), Expect = e-156
 Identities = 267/288 (92%), Positives = 282/288 (97%)
 Frame = +1

Query: 97  KVDMLEIEKAVDKIQGNVPKVEWDFEGIHYFDNGPLTVQYLFVLDALNFCFWPDKDLTYD 276
           KVDMLE+EK VDKIQGNVPKVEWDFEGIHYFD+GPLTVQYLFVLDALNFCFWPDKDL+YD
Sbjct: 19  KVDMLEVEKVVDKIQGNVPKVEWDFEGIHYFDDGPLTVQYLFVLDALNFCFWPDKDLSYD 78

Query: 277 NLASGLKLALEKDKSALDADRLKNYTGPQLRELLNWPRPLPIEEERVRLLHEVGLELERS 456
           +LASGLKLALEKDK+ALDADRL++YTGPQLR+LLNWPRPLPIEEERVRLLHEVG+ELERS
Sbjct: 79  HLASGLKLALEKDKTALDADRLQSYTGPQLRQLLNWPRPLPIEEERVRLLHEVGMELERS 138

Query: 457 FGGEAANLVKSAGNSAASLIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKG 636
           FGGEAANLVKSAGNSAA+LIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKG
Sbjct: 139 FGGEAANLVKSAGNSAATLIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKG 198

Query: 637 ENYGQFDDIKSITIFADYIVPAVLRELGILKYESSLCCSIDSNREIVPGSEEEVEIRACS 816
           +NYG+F DIKSITIFADYIVPAVLRELGILKY S+L CSIDS+ EIVPGSEEEVEIRACS
Sbjct: 199 QNYGEFHDIKSITIFADYIVPAVLRELGILKYGSNLSCSIDSSSEIVPGSEEEVEIRACS 258

Query: 817 VHAVEKMRELINKKFGKQLLSIDIDLWLWSVGVQNMALSHHRTLSIYY 960
           V+AVEKMRELINKKFGKQLLSIDIDLWLWS GVQNMALSHHRTLSIYY
Sbjct: 259 VYAVEKMRELINKKFGKQLLSIDIDLWLWSCGVQNMALSHHRTLSIYY 306



to top

>AK070635:Os07g0588800 |
          Length = 313

 Score =  540 bits (1392), Expect = e-154
 Identities = 262/285 (91%), Positives = 278/285 (97%)
 Frame = +1

Query: 106 MLEIEKAVDKIQGNVPKVEWDFEGIHYFDNGPLTVQYLFVLDALNFCFWPDKDLTYDNLA 285
           + E+EK VDKIQGNVPKVEWDFEGIHYFD+GPLTVQYLFVLDALNFCFWPDKDL+YD+LA
Sbjct: 29  LTEVEKVVDKIQGNVPKVEWDFEGIHYFDDGPLTVQYLFVLDALNFCFWPDKDLSYDHLA 88

Query: 286 SGLKLALEKDKSALDADRLKNYTGPQLRELLNWPRPLPIEEERVRLLHEVGLELERSFGG 465
           SGLKLALEKDK+ALDADRL++YTGPQLR+LLNWPRPLPIEEERVRLLHEVG+ELERSFGG
Sbjct: 89  SGLKLALEKDKTALDADRLQSYTGPQLRQLLNWPRPLPIEEERVRLLHEVGMELERSFGG 148

Query: 466 EAANLVKSAGNSAASLIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKGENY 645
           EAANLVKSAGNSAA+LIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKG+NY
Sbjct: 149 EAANLVKSAGNSAATLIELITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKGQNY 208

Query: 646 GQFDDIKSITIFADYIVPAVLRELGILKYESSLCCSIDSNREIVPGSEEEVEIRACSVHA 825
           G+F DIKSITIFADYIVPAVLRELGILKY S+L CSIDS+ EIVPGSEEEVEIRACSV+A
Sbjct: 209 GEFHDIKSITIFADYIVPAVLRELGILKYGSNLSCSIDSSSEIVPGSEEEVEIRACSVYA 268

Query: 826 VEKMRELINKKFGKQLLSIDIDLWLWSVGVQNMALSHHRTLSIYY 960
           VEKMRELINKKFGKQLLSIDIDLWLWS GVQNMALSHHRTLSIYY
Sbjct: 269 VEKMRELINKKFGKQLLSIDIDLWLWSCGVQNMALSHHRTLSIYY 313



to top

>AK063431:Os03g0107400 |
          Length = 950

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 304 LEKDKSALDADRLKNYTGPQLRELLNWPRPLPIEEERVRLLHE 432
           + K K+  DAD LK   GP +++   W + L I+E+ + +L E
Sbjct: 448 ISKVKNVTDADALKK--GPLVKQDTEWAKQLSIKEDEITMLRE 488



to top

>Os02g0109400:Os02g0109400 |
          Length = 997

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/62 (33%), Positives = 35/62 (56%)
 Frame = +1

Query: 688 YIVPAVLRELGILKYESSLCCSIDSNREIVPGSEEEVEIRACSVHAVEKMRELINKKFGK 867
           YI   V +ELGI    + + C +     I+  ++E VE++A  + A+EK +E + +K GK
Sbjct: 599 YIAYGVAQELGIGDSVTKIHCDMSDAVNILMHTDE-VELKAERITAIEKKKESL-RKDGK 656

Query: 868 QL 873
            L
Sbjct: 657 NL 658



to top

>AK063269:Os01g0765500 |
          Length = 708

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 1018 VLGVSFSCCYIWILKFSPSPRSAQKVQTVATVGS 1119
            ++  + SCCYI+ +  SP P S   +    T GS
Sbjct: 207  LVAAACSCCYIYCMSSSPFPTSQMGLDFAGTTGS 240



to top

>AK110286: |
          Length = 697

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 27/95 (28%), Positives = 39/95 (41%)
 Frame = -2

Query: 505 QQSFLQTSQD*QPHRQSFFQAPDQPHEEGGLFPPQLAVGVANSAVLEVAVQYNSSDDLHQ 326
           Q    QT  D    R+ + +A       GGL PP L  G+ + AV++       +D  H 
Sbjct: 102 QVHIAQTPTDETLRRKIYSEAELCAAAAGGLSPPPLPAGLQHHAVVQDVKILIGADGTHS 161

Query: 325 VLTYLSLMLT*VQKPNCHRSSPCLARSKSSAHPRR 221
            +   S +L   + P     S   ARS S+  P R
Sbjct: 162 AVR--STVLNNARMPPERVPSTGRARSSSAHAPSR 194



to top

>Os06g0320200:Os06g0320200 |
          Length = 580

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 376 LNWPRPLPIEEERVRLLH-EVGLELERSFGGEAANLV 483
           ++WPR LP  E  V L H +    LE+ +GG  +NL+
Sbjct: 210 VSWPRILPSVEPFVTLFHWDSPQALEQQYGGFLSNLI 246



to top

>Os09g0278300:Os09g0278300 |
          Length = 1524

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -1

Query: 929 SAMF*TPTDQSQRSMSMLRSCFPNFLLMSSLIFSTA*TEQARISTSSSLPGTISRFESME 750
           S  + TP    + S S   SCF +  L   L+ + +  E   + T    PG +   ESME
Sbjct: 42  STPYGTPLFSRESSCSSFASCFSS--LDDYLVETDSEEEIEVLDTGQLHPGILFSDESME 99

Query: 749 QHRLDS 732
           Q + DS
Sbjct: 100 QRKADS 105



to top

>AK102414:Os02g0435000 |
          Length = 372

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 253 PDKDLTYDNLASGLKLALEKDKSALDADRLKNYTGPQLRELLNWPRPLPIEEERV 417
           PDKDL  +++ + L   L K+   +  DR+     P  ++L +WP  L I  E+V
Sbjct: 92  PDKDLEVEDIVNTL---LSKNL-VIRCDRVWKTVRPGKKKLSSWPAHLEIHREQV 142



to top

>AK060832:Os02g0435000 |
          Length = 372

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 253 PDKDLTYDNLASGLKLALEKDKSALDADRLKNYTGPQLRELLNWPRPLPIEEERV 417
           PDKDL  +++ + L   L K+   +  DR+     P  ++L +WP  L I  E+V
Sbjct: 92  PDKDLEVEDIVNTL---LSKNL-VIRCDRVWKTVRPGKKKLSSWPAHLEIHREQV 142


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,696,696
Number of extensions: 668250
Number of successful extensions: 1898
Number of sequences better than 10.0: 10
Number of HSP's gapped: 1898
Number of HSP's successfully gapped: 10
Length of query: 387
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 284
Effective length of database: 11,275,632
Effective search space: 3202279488
Effective search space used: 3202279488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top