ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf118i17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068174:Os09g0297000 | 776 | 0.0 | 2 | AB007120:Os05g0361200 | 500 | e-141 | 3 | AK073873:Os05g0361200 | 500 | e-141 | 4 | AK062212:Os05g0361200 | 69 | 2e-11 | 5 | Os01g0246600:Os01g0246600 | 31 | 2.8 | 6 | AK101424:Os12g0239000 | 30 | 4.8 | 7 | AK107400:Os09g0268300 | 30 | 6.3 | 8 | AK067908:Os09g0268300 | 30 | 6.3 | 9 | AK066489:Os01g0149900 | 30 | 6.3 | 10 | AK105297:Os03g0859300 | 25 | 7.9 | 11 | Os07g0286100:Os07g0286100 | 30 | 8.2 |
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>AK068174:Os09g0297000 | Length = 482 Score = 776 bits (2004), Expect = 0.0 Identities = 408/486 (83%), Positives = 429/486 (88%), Gaps = 3/486 (0%) Frame = +2 Query: 149 MECVRSGA--LDLGRSGNFLGKSG-STTSCGKVRCSTNLAGSTKCEQNLHGKAKPLLLSA 319 MECVRSG+ LD S FLGK G S TSCGK STNLA TK EQNLHG KP L+A Sbjct: 1 MECVRSGSGVLDPRCSPRFLGKKGGSLTSCGKAT-STNLAICTKHEQNLHGNVKPSQLAA 59 Query: 320 SGKARGTSGLVHRSPVLKHQHHLSVRSTSTDVCTTFDEDVKGVSSHAVEEKVGVLLLNLG 499 SG +S VHRSPVLK + +LS RSTS DV TTFDE+V+ VSSHA EEKVGVLLLNLG Sbjct: 60 SG----SSYSVHRSPVLKQRQNLSARSTSADVYTTFDENVRAVSSHAAEEKVGVLLLNLG 115 Query: 500 GPETLNDVQPFLFNLFADPDIIXXXXXXXXXXXXXAKLISTFRAPKSKEGYASIGGGSPL 679 GPETL+DVQPFLFNLFADPDII AKLISTFRAPKSKEGYASIGGGSPL Sbjct: 116 GPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFRAPKSKEGYASIGGGSPL 175 Query: 680 RKITDEQANALKVALKSKNLEADIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYS 859 RKITDEQANALKVALK KNL A+IYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYS Sbjct: 176 RKITDEQANALKVALKKKNLNANIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYS 235 Query: 860 ISTSGSSIRVLQNIVKEDPYFAGLPISIIESWYQREGYVKSMADLIEKELSVFSNPEEVM 1039 ISTSGSSIRVLQNIVKED YFAGLPISIIESWYQR+GYVKSMADLIEKELS+FSNPEEVM Sbjct: 236 ISTSGSSIRVLQNIVKEDSYFAGLPISIIESWYQRDGYVKSMADLIEKELSIFSNPEEVM 295 Query: 1040 IFFSAHGVPLTYVKDAGDPYRDQMEDCIALIMEELKSRGTLNDHTLAYQSRVGPVQWLKP 1219 IFFSAHGVPLTYV DAGDPYRDQMEDCIALIM ELKSRG LN HTLAYQSRVGPVQWLKP Sbjct: 296 IFFSAHGVPLTYVTDAGDPYRDQMEDCIALIMGELKSRGILNSHTLAYQSRVGPVQWLKP 355 Query: 1220 YTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCT 1399 YTDEVLVELGQ+GVKSLLAVPVSFVSEHIETLEEIDMEY+ELALESGIENWGRVPALGCT Sbjct: 356 YTDEVLVELGQQGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALGCT 415 Query: 1400 SSFISDLADAVVEALPSASAMATRKVKDTDSDMDMMHYLTKMFLGSVLAFFLLLSPRLVS 1579 SSFISDLADAVVEALPSASA+ T+KV ++DSDMD+MHYL+KMF GS+LAF LLLSPRL+S Sbjct: 416 SSFISDLADAVVEALPSASALVTKKVDESDSDMDLMHYLSKMFFGSILAFVLLLSPRLIS 475 Query: 1580 AFRNTL 1597 AFRNTL Sbjct: 476 AFRNTL 481
>AB007120:Os05g0361200 | Length = 491 Score = 500 bits (1287), Expect = e-141 Identities = 247/373 (66%), Positives = 299/373 (80%) Frame = +2 Query: 362 PVLKHQHHLSVRSTSTDVCTTFDEDVKGVSSHAVEEKVGVLLLNLGGPETLNDVQPFLFN 541 P+ +HHL V S++++ T D + EK+GVLLLNLGGPETL+DVQPFLFN Sbjct: 44 PLSSLRHHLRVHSSASEAVLTSQSDFTKLL--VGNEKIGVLLLNLGGPETLDDVQPFLFN 101 Query: 542 LFADPDIIXXXXXXXXXXXXXAKLISTFRAPKSKEGYASIGGGSPLRKITDEQANALKVA 721 LFADPDII A+ IS RAPKSKEGYASIGGGSPLR+ITD QA AL+ A Sbjct: 102 LFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKA 161 Query: 722 LKSKNLEADIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNI 901 L K++ A +YVGMRYW+PFTEEAI+QIK+D ITKLVVLPLYPQ+SISTSGSS+R+L+ I Sbjct: 162 LCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGI 221 Query: 902 VKEDPYFAGLPISIIESWYQREGYVKSMADLIEKELSVFSNPEEVMIFFSAHGVPLTYVK 1081 +ED Y + ++I SWYQREGY+K+MA LIEKEL FS P++VMIFFSAHGVPL YV+ Sbjct: 222 FREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVE 281 Query: 1082 DAGDPYRDQMEDCIALIMEELKSRGTLNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGV 1261 +AGDPY+ +ME+C+ LIMEEL+ RG N TLAYQSRVGPV+WL+PYTDE ++ELGQKGV Sbjct: 282 EAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSRVGPVEWLRPYTDETIIELGQKGV 341 Query: 1262 KSLLAVPVSFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCTSSFISDLADAVVEA 1441 KSLLAVP+SFVSEHIETLEEID+EY+ELALESGI++WGRVPALGC +FI+DLADAV+E+ Sbjct: 342 KSLLAVPISFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIES 401 Query: 1442 LPSASAMATRKVK 1480 LP AMA ++ Sbjct: 402 LPYVGAMAVSNLE 414
>AK073873:Os05g0361200 | Length = 526 Score = 500 bits (1287), Expect = e-141 Identities = 247/373 (66%), Positives = 299/373 (80%) Frame = +2 Query: 362 PVLKHQHHLSVRSTSTDVCTTFDEDVKGVSSHAVEEKVGVLLLNLGGPETLNDVQPFLFN 541 P+ +HHL V S++++ T D + EK+GVLLLNLGGPETL+DVQPFLFN Sbjct: 79 PLSSLRHHLRVHSSASEAVLTSQSDFTKLL--VGNEKIGVLLLNLGGPETLDDVQPFLFN 136 Query: 542 LFADPDIIXXXXXXXXXXXXXAKLISTFRAPKSKEGYASIGGGSPLRKITDEQANALKVA 721 LFADPDII A+ IS RAPKSKEGYASIGGGSPLR+ITD QA AL+ A Sbjct: 137 LFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQAEALRKA 196 Query: 722 LKSKNLEADIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNI 901 L K++ A +YVGMRYW+PFTEEAI+QIK+D ITKLVVLPLYPQ+SISTSGSS+R+L+ I Sbjct: 197 LCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLEGI 256 Query: 902 VKEDPYFAGLPISIIESWYQREGYVKSMADLIEKELSVFSNPEEVMIFFSAHGVPLTYVK 1081 +ED Y + ++I SWYQREGY+K+MA LIEKEL FS P++VMIFFSAHGVPL YV+ Sbjct: 257 FREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHGVPLAYVE 316 Query: 1082 DAGDPYRDQMEDCIALIMEELKSRGTLNDHTLAYQSRVGPVQWLKPYTDEVLVELGQKGV 1261 +AGDPY+ +ME+C+ LIMEEL+ RG N TLAYQSRVGPV+WL+PYTDE ++ELGQKGV Sbjct: 317 EAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSRVGPVEWLRPYTDETIIELGQKGV 376 Query: 1262 KSLLAVPVSFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCTSSFISDLADAVVEA 1441 KSLLAVP+SFVSEHIETLEEID+EY+ELALESGI++WGRVPALGC +FI+DLADAV+E+ Sbjct: 377 KSLLAVPISFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDLADAVIES 436 Query: 1442 LPSASAMATRKVK 1480 LP AMA ++ Sbjct: 437 LPYVGAMAVSNLE 449
>AK062212:Os05g0361200 | Length = 125 Score = 68.6 bits (166), Expect = 2e-11 Identities = 31/48 (64%), Positives = 40/48 (83%) Frame = +2 Query: 1337 RELALESGIENWGRVPALGCTSSFISDLADAVVEALPSASAMATRKVK 1480 +ELALESGI++WGRVPALGC +FI+DLADAV+E+LP AMA ++ Sbjct: 1 KELALESGIKHWGRVPALGCEPTFITDLADAVIESLPYVGAMAVSNLE 48
>Os01g0246600:Os01g0246600 | Length = 237 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = -2 Query: 1597 KSVPES--RN*PRR*QQEEGQDRAQEHLGQIMHHVHVRVSILDLSGRHRGG 1451 + +PE R+ P R Q + RA H G HHV R + D G HR G Sbjct: 98 RGLPEHHVRDAPGRAQHQRAAPRAARHCGDARHHVSPRGDLHD-EGAHRAG 147
>AK101424:Os12g0239000 | Length = 1174 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/95 (27%), Positives = 39/95 (41%) Frame = +2 Query: 203 GKSGSTTSCGKVRCSTNLAGSTKCEQNLHGKAKPLLLSASGKARGTSGLVHRSPVLKHQH 382 G+ + T CGK+ L+G CE+ G + SA K + T GL H Sbjct: 542 GEMATCTRCGKIFNVMYLSGDNYCEECDFGDG---IFSAGSKIQTTEGL----------H 588 Query: 383 HLSVRSTSTDVCTTFDEDVKGVSSHAVEEKVGVLL 487 + T + VC ED + ++ VE+ V L Sbjct: 589 QKDHKFTQSKVCIP-SEDRRPIALDCVEDSSDVSL 622
>AK107400:Os09g0268300 | Length = 308 Score = 30.0 bits (66), Expect = 6.3 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Frame = -3 Query: 846 YSGRTTSFVILSFLI*SMASSVNGYQYRIP---T*ISASKFLLFSATFKAFACSSVI-FR 679 Y GR T+FV+LS + M + GY + T + + F ++ +SV + Sbjct: 16 YGGRVTTFVVLSCITAGMGGVIFGYDIGVSGGVTSMDGFLSMFFPEVYRRMKGTSVSNYC 75 Query: 678 RGDPPPIEAYPSLLLGALKVDISLASGL*RNLNSLGSRMISGSA 547 + D + A+ S L A + LAS + S +I+GSA Sbjct: 76 KFDSELLTAFTSSLYIAGLLTTFLASSVTARCGRRPSMVIAGSA 119
>AK067908:Os09g0268300 | Length = 511 Score = 30.0 bits (66), Expect = 6.3 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Frame = -3 Query: 846 YSGRTTSFVILSFLI*SMASSVNGYQYRIP---T*ISASKFLLFSATFKAFACSSVI-FR 679 Y GR T+FV+LS + M + GY + T + + F ++ +SV + Sbjct: 16 YGGRVTTFVVLSCITAGMGGVIFGYDIGVSGGVTSMDGFLSMFFPEVYRRMKGTSVSNYC 75 Query: 678 RGDPPPIEAYPSLLLGALKVDISLASGL*RNLNSLGSRMISGSA 547 + D + A+ S L A + LAS + S +I+GSA Sbjct: 76 KFDSELLTAFTSSLYIAGLLTTFLASSVTARCGRRPSMVIAGSA 119
>AK066489:Os01g0149900 | Length = 742 Score = 30.0 bits (66), Expect = 6.3 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 773 YPFTEEAIDQIKKDKITKLVVLPLYPQYSISTS 871 + FTE + DQ+ +T V+L +Y +YS+S S Sbjct: 623 FDFTEMSADQLLLSDLTNEVLLDIYKKYSVSKS 655
>AK105297:Os03g0859300 | Length = 383 Score = 24.6 bits (52), Expect(2) = 7.9 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = -1 Query: 1631 PRCIDKNKQLTEECSGKQKLASAITAGRRPGPSPR----TSW 1518 P CID + + S + K A AG PSPR TSW Sbjct: 53 PPCIDSPSEGQGKQSSRHKPARRGGAGADHSPSPRDDRATSW 94 Score = 23.5 bits (49), Expect(2) = 7.9 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -2 Query: 1519 GQIMHHVHVRVSILDLSGRHRGGRGKGFD 1433 G+ HH + GR RGG G GFD Sbjct: 97 GRHHHHHNSGGRRGSFGGRRRGGGGGGFD 125
>Os07g0286100:Os07g0286100 | Length = 340 Score = 29.6 bits (65), Expect = 8.2 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 350 VHRSPVLKHQHHLSVRSTSTDVCTTFDEDVKGVSSHAVEEKVGVLLLNLGGP 505 V R+P LK +LS + T D+ T ++ VSS A V VL+L GP Sbjct: 281 VVRAPQLKVLGYLSDKITKLDLGTVIIQETMVVSSTASLRTVKVLVLESAGP 332 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 57,841,682 Number of extensions: 1324612 Number of successful extensions: 3773 Number of sequences better than 10.0: 11 Number of HSP's gapped: 3770 Number of HSP's successfully gapped: 12 Length of query: 666 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 559 Effective length of database: 11,115,468 Effective search space: 6213546612 Effective search space used: 6213546612 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
