ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf123h01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060579.1| Oryza sativa (japonica cultivar-group) Os04g0641400 (Os04g0641400) mRNA, complete cds Length = 1113 Score = 392 bits (198), Expect = e-105 Identities = 444/526 (84%) Strand = Plus / Plus Query: 436 ggggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgt 495 ||||||||||||| || || || ||||| || ||||| ||||||||||||||||| || | Sbjct: 101 ggggaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcat 160 Query: 496 ctgaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagacctta 555 |||||| |||||||||||||||||| |||||||||||| | |||||||||||||| |||| Sbjct: 161 ctgaaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaactta 220 Query: 556 tcagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgg 615 |||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| Sbjct: 221 tcagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgg 280 Query: 616 aaactgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgtt 675 |||||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| | Sbjct: 281 aaactgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgct 340 Query: 676 ggggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggagg 735 ||||||||||| |||| || ||||||||||||| |||| |||| | ||||||| Sbjct: 341 ggggacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggagg 400 Query: 736 aaattgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttga 795 |||||||||| ||| ||| ||| ||||||||||||| |||||||||| || ||||||| Sbjct: 401 aaattgaatacaggacctatcaaacatgccagttcaattccactccacaagaagctttga 460 Query: 796 cagtggctcaggacgtcgtgaagacgatgctgtcgaggggatacatactgagcaaggacg 855 | | |||||||| || |||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 461 cgattgctcaggatgttgtgaagacaatgctagcaaggggatacgtactcagcaaggatg 520 Query: 856 cattgtccagggctagagctttcgacgagtcccaccagttatctggatctgcggcagcaa 915 || || ||||||||||||| || || |||||||| ||| || | | |||| ||||| | Sbjct: 521 cactggccagggctagagcctttgatgagtcccatcaggtaacagcgactgccgcagcca 580 Query: 916 aggctgcagagctgagcaggaggctcggcctgactgacagagtcag 961 ||||||| |||||||||| |||| | ||||| || ||||| ||||| Sbjct: 581 aggctgcggagctgagcaagaggattggcctaaccgacagggtcag 626 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Plus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 627 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 686 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 687 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 746 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 747 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 806 Query: 1121 tctc 1124 |||| Sbjct: 807 tctc 810 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 839 tggctgctcatggtagacacaattaagtgaaaataaacaccc 880
>dbj|AK109401.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G01, full insert sequence Length = 1113 Score = 392 bits (198), Expect = e-105 Identities = 444/526 (84%) Strand = Plus / Plus Query: 436 ggggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgt 495 ||||||||||||| || || || ||||| || ||||| ||||||||||||||||| || | Sbjct: 101 ggggaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcat 160 Query: 496 ctgaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagacctta 555 |||||| |||||||||||||||||| |||||||||||| | |||||||||||||| |||| Sbjct: 161 ctgaaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaactta 220 Query: 556 tcagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgg 615 |||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| Sbjct: 221 tcagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgg 280 Query: 616 aaactgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgtt 675 |||||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| | Sbjct: 281 aaactgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgct 340 Query: 676 ggggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggagg 735 ||||||||||| |||| || ||||||||||||| |||| |||| | ||||||| Sbjct: 341 ggggacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggagg 400 Query: 736 aaattgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttga 795 |||||||||| ||| ||| ||| ||||||||||||| |||||||||| || ||||||| Sbjct: 401 aaattgaatacaggacctatcaaacatgccagttcaattccactccacaagaagctttga 460 Query: 796 cagtggctcaggacgtcgtgaagacgatgctgtcgaggggatacatactgagcaaggacg 855 | | |||||||| || |||||||| ||||| | ||||||||| |||| |||||||| | Sbjct: 461 cgattgctcaggatgttgtgaagacaatgctagcaaggggatacgtactcagcaaggatg 520 Query: 856 cattgtccagggctagagctttcgacgagtcccaccagttatctggatctgcggcagcaa 915 || || ||||||||||||| || || |||||||| ||| || | | |||| ||||| | Sbjct: 521 cactggccagggctagagcctttgatgagtcccatcaggtaacagcgactgccgcagcca 580 Query: 916 aggctgcagagctgagcaggaggctcggcctgactgacagagtcag 961 ||||||| |||||||||| |||| | ||||| || ||||| ||||| Sbjct: 581 aggctgcggagctgagcaagaggattggcctaaccgacagggtcag 626 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Plus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 627 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 686 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 687 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 746 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 747 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 806 Query: 1121 tctc 1124 |||| Sbjct: 807 tctc 810 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 839 tggctgctcatggtagacacaattaagtgaaaataaacaccc 880
>gb|AY105883.1| Zea mays PCO068227 mRNA sequence Length = 1236 Score = 339 bits (171), Expect = 2e-89 Identities = 597/739 (80%) Strand = Plus / Plus Query: 443 catgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctgaaaa 502 |||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||||||| Sbjct: 271 catgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatctgaaag 330 Query: 503 tgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatcagatc 562 ||||||| |||||||||| || |||||||| |||||||| ||| | || ||||||||||| Sbjct: 331 tgatctttatgagttcttttcgttctctggccctattgaacatgttgaacttatcagatc 390 Query: 563 aggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaactgc 622 ||||| ||| ||| | |||||||||||||| |||||||| | || ||||||||||||||| Sbjct: 391 aggagaatacggtgctactgcttatgtgacattcaaggagcgctttgccttggaaactgc 450 Query: 623 agtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggggaca 682 |||||| | ||||||||||| ||||||||||||||||| |||||| || ||||||||| Sbjct: 451 ggtattgctcagtggggctactattgtggatcagccggtatgcataacttattggggaca 510 Query: 683 gcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattga 742 ||||| ||| || ||||||||||||||||||||||||| |||| || ||||||||||| Sbjct: 511 acctgaggagacttttaatttctgggacaggccaacttgggaggttgaagaggaaattga 570 Query: 743 atatagggactaccaatcatgccagttcaacgccactccacaggaggctttgacagtggc 802 ||| | | || ||||||||||||| |||| | ||||| ||||| ||| | |||||||| Sbjct: 571 atacacgagttatcaatcatgccagtacaacactactccgcaggaagctcttacagtggc 630 Query: 803 tcaggacgtcgtgaagacgatgctgtcgaggggatacatactgagcaaggacgcattgtc 862 ||| || |||||||||||||||| | | ||| ||| | || ||||||||||| ||| | Sbjct: 631 tcaagatatcgtgaagacgatgctagcaaaggggtacgtgctcagcaaggacgctttggc 690 Query: 863 cagggctagagctttcgacgagtcccaccagttatctggatctgcggcagcaaaggctgc 922 | ||||||||| || || ||||||| | ||| | | | || ||||| |||||||| Sbjct: 691 taaggctagagcctttgatgagtcccgcggattaacagctgcagctgcagccaaggctgc 750 Query: 923 agagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgcaatcag 982 ||||||||||| ||| | || | |||||||| |||||||||||||| || ||||| | Sbjct: 751 agagctgagcaagagaattggtttaactgacagggtcagtgctggtgtcggtgcaatgcg 810 Query: 983 atcagtggacgagacataccatgttaccgagacgaccaagaccgtcgccactgccaccgg 1042 ||| || || |||||||| | || || |||||||||||||| || || |||||||| || Sbjct: 811 atcggtcgatgagacatatcgcgtaacggagacgaccaagacggtagctactgccactgg 870 Query: 1043 aagaaccgcggtcaaggttatgaacaccatcgtgacgagcagctatttctccgcaggagc 1102 |||||| || | ||||| | || ||||| || |||||||| ||||| |||||||| Sbjct: 871 aagaactgcagctaaggtggtaaatggtatcgtcaccagcagctacttctctgcaggagc 930 Query: 1103 tatgatgctgtccgaggctctcacccgcgccgccaaggccgctgaaaatctggctgctca 1162 |||||| |||| || ||||| || | || |||||| |||| | ||||||| ||||| Sbjct: 931 catgatgttgtctgatgctcttactagggctgccaagaccgcggctgatctggccgctca 990 Query: 1163 tggcaggcagaattaagtg 1181 |||||| |||| ||||||| Sbjct: 991 tggcagacagagttaagtg 1009
>gb|DQ245748.1| Zea mays clone 20071 mRNA sequence Length = 1100 Score = 327 bits (165), Expect = 6e-86 Identities = 333/389 (85%) Strand = Plus / Plus Query: 438 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 497 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 153 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 212 Query: 498 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 557 |||| |||||||||||||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 213 gaaagtgatcttcatgagttcttttcgttctctggtcctattgagcatatagaacttatc 272 Query: 558 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 617 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 273 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 332 Query: 618 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 677 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 333 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 392 Query: 678 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 737 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 393 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 452 Query: 738 attgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgaca 797 || ||||| ||| |||||||| ||||||||| |||| | ||||| ||||| ||||| ||| Sbjct: 453 atcgaatacaggaactaccaaacatgccagtacaacactactccgcaggaagcttttaca 512 Query: 798 gtggctcaggacgtcgtgaagacgatgct 826 |||||||| || || ||||||||||||| Sbjct: 513 gtggctcaagatatcatgaagacgatgct 541 Score = 89.7 bits (45), Expect = 3e-14 Identities = 210/265 (79%) Strand = Plus / Plus Query: 917 ggctgcagagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgc 976 ||||||||||||||||| ||| | || | ||||| || |||| |||||||||||| || Sbjct: 632 ggctgcagagctgagcaagagaattggtttaactgatagggtcaatgctggtgttggtgc 691 Query: 977 aatcagatcagtggacgagacataccatgttaccgagacgaccaagaccgtcgccactgc 1036 ||| ||||||| || |||||||| | || | ||||| |||||||| || || ||||| Sbjct: 692 aatgcgatcagtcgatgagacatatcgcgtaagagagacaaccaagacggttgctactgc 751 Query: 1037 caccggaagaaccgcggtcaaggttatgaacaccatcgtgacgagcagctatttctccgc 1096 ||| |||||||| || | ||||| | || |||||| || |||||||| ||||| || Sbjct: 752 cactggaagaacggcagcaaaggtggtaaatggcatcgtcaccagcagctacttctctgc 811 Query: 1097 aggagctatgatgctgtccgaggctctcacccgcgccgccaaggccgctgaaaatctggc 1156 |||||| ||||| |||| || ||||| || | || ||||||||||| | | ||||||| Sbjct: 812 aggagccatgatcttgtctgatgctcttactagggctgccaaggccgcggcagatctggc 871 Query: 1157 tgctcatggcaggcagaattaagtg 1181 |||||||| ||||||||||||||| Sbjct: 872 cgctcatggtaggcagaattaagtg 896
>gb|AY108401.1| Zea mays PCO068228 mRNA sequence Length = 1376 Score = 327 bits (165), Expect = 6e-86 Identities = 333/389 (85%) Strand = Plus / Plus Query: 438 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 497 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 342 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 401 Query: 498 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 557 |||| |||||||||||||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 402 gaaagtgatcttcatgagttcttttcgttctctggtcctattgagcatatagaacttatc 461 Query: 558 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 617 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 462 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 521 Query: 618 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 677 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 522 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 581 Query: 678 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 737 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 582 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 641 Query: 738 attgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgaca 797 || ||||| ||| |||||||| ||||||||| |||| | ||||| ||||| ||||| ||| Sbjct: 642 atcgaatacaggaactaccaaacatgccagtacaacactactccgcaggaagcttttaca 701 Query: 798 gtggctcaggacgtcgtgaagacgatgct 826 |||||||| || || ||||||||||||| Sbjct: 702 gtggctcaagatatcatgaagacgatgct 730 Score = 89.7 bits (45), Expect = 3e-14 Identities = 210/265 (79%) Strand = Plus / Plus Query: 917 ggctgcagagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgc 976 ||||||||||||||||| ||| | || | ||||| || |||| |||||||||||| || Sbjct: 821 ggctgcagagctgagcaagagaattggtttaactgatagggtcaatgctggtgttggtgc 880 Query: 977 aatcagatcagtggacgagacataccatgttaccgagacgaccaagaccgtcgccactgc 1036 ||| ||||||| || |||||||| | || | ||||| |||||||| || || ||||| Sbjct: 881 aatgcgatcagtcgatgagacatatcgcgtaagagagacaaccaagacggttgctactgc 940 Query: 1037 caccggaagaaccgcggtcaaggttatgaacaccatcgtgacgagcagctatttctccgc 1096 ||| |||||||| || | ||||| | || |||||| || |||||||| ||||| || Sbjct: 941 cactggaagaacggcagcaaaggtggtaaatggcatcgtcaccagcagctacttctctgc 1000 Query: 1097 aggagctatgatgctgtccgaggctctcacccgcgccgccaaggccgctgaaaatctggc 1156 |||||| ||||| |||| || ||||| || | || ||||||||||| | | ||||||| Sbjct: 1001 aggagccatgatcttgtctgatgctcttactagggctgccaaggccgcggcagatctggc 1060 Query: 1157 tgctcatggcaggcagaattaagtg 1181 |||||||| ||||||||||||||| Sbjct: 1061 cgctcatggtaggcagaattaagtg 1085
>dbj|AK062620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B07, full insert sequence Length = 479 Score = 321 bits (162), Expect = 4e-84 Identities = 309/358 (86%) Strand = Plus / Plus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 167 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 168 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 227 Query: 559 gatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaa 618 ||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 228 gatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttggaaa 287 Query: 619 ctgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggg 678 ||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| |||| Sbjct: 288 ctgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgctggg 347 Query: 679 gacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaa 738 |||||||| |||| || ||||||||||||| |||| |||| | |||||||||| Sbjct: 348 gacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggaggaaa 407 Query: 739 ttgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgac 796 ||||||| ||| ||| ||| ||||||||||||| |||||||||| || |||||||| Sbjct: 408 ttgaatacaggacctatcaaacatgccagttcaattccactccacaagaagctttgac 465
>gb|BT016343.1| Zea mays clone Contig176 mRNA sequence Length = 1045 Score = 319 bits (161), Expect = 2e-83 Identities = 332/389 (85%) Strand = Plus / Minus Query: 438 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 497 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 942 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 883 Query: 498 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 557 |||| |||||||||||||||||| || |||||||| |||||| |||||||||| |||||| Sbjct: 882 gaaagtgatcttcatgagttcttttcgttctctggtcctattcagcatatagaacttatc 823 Query: 558 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 617 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 822 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 763 Query: 618 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 677 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 762 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 703 Query: 678 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 737 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 702 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 643 Query: 738 attgaatatagggactaccaatcatgccagttcaacgccactccacaggaggctttgaca 797 || ||||| ||| |||||||| ||||||||| |||| | ||||| ||||| ||||| ||| Sbjct: 642 atcgaatacaggaactaccaaacatgccagtacaacactactccgcaggaagcttttaca 583 Query: 798 gtggctcaggacgtcgtgaagacgatgct 826 |||||||| || || ||||||||||||| Sbjct: 582 gtggctcaagatatcatgaagacgatgct 554 Score = 81.8 bits (41), Expect = 6e-12 Identities = 209/265 (78%) Strand = Plus / Minus Query: 917 ggctgcagagctgagcaggaggctcggcctgactgacagagtcagtgctggtgttggcgc 976 ||||||||||||||||| ||| | || | ||||| || |||| |||||||||||| || Sbjct: 463 ggctgcagagctgagcaagagaattggtttaactgatagggtcaatgctggtgttggtgc 404 Query: 977 aatcagatcagtggacgagacataccatgttaccgagacgaccaagaccgtcgccactgc 1036 ||| ||||||| || |||||||| || | ||||| |||||||| || || ||||| Sbjct: 403 aatgcgatcagtcgatgagacatatggcgtaagagagacaaccaagacggttgctactgc 344 Query: 1037 caccggaagaaccgcggtcaaggttatgaacaccatcgtgacgagcagctatttctccgc 1096 ||| |||||||| || | ||||| | || |||||| || |||||||| ||||| || Sbjct: 343 cactggaagaacggcagcaaaggtggtaaatggcatcgtcaccagcagctacttctctgc 284 Query: 1097 aggagctatgatgctgtccgaggctctcacccgcgccgccaaggccgctgaaaatctggc 1156 |||||| ||||| |||| || ||||| || | || ||||||||||| | | ||||||| Sbjct: 283 aggagccatgatcttgtctgatgctcttactagggctgccaaggccgcggcagatctggc 224 Query: 1157 tgctcatggcaggcagaattaagtg 1181 |||||||| ||||||||||||||| Sbjct: 223 cgctcatggtaggcagaattaagtg 199
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Minus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 45809 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 45750 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 45749 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 45690 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 45689 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 45630 Query: 1121 tctc 1124 |||| Sbjct: 45629 tctc 45626 Score = 129 bits (65), Expect = 3e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 47626 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 47567 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 47566 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 47507 Query: 559 g 559 | Sbjct: 47506 g 47506 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Minus Query: 557 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 616 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 47169 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 47110 Query: 617 aactgcagtattg 629 ||||||||||||| Sbjct: 47109 aactgcagtattg 47097 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 760 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 819 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 46011 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 45952 Query: 820 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 879 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 45951 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 45892 Query: 880 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 939 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 45891 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 45832 Query: 940 tcggcctgactgacagagtcag 961 | ||||| || ||||| ||||| Sbjct: 45831 ttggcctaaccgacagggtcag 45810 Score = 61.9 bits (31), Expect = 6e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 636 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 695 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 46285 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 46226 Query: 696 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 750 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 46225 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 46171 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 45597 tggctgctcatggtagacacaattaagtgaaaataaacaccc 45556
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Minus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 9291 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 9232 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 9231 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 9172 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 9171 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 9112 Query: 1121 tctc 1124 |||| Sbjct: 9111 tctc 9108 Score = 129 bits (65), Expect = 3e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 11108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 11049 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 11048 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 10989 Query: 559 g 559 | Sbjct: 10988 g 10988 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Minus Query: 557 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 616 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 10651 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 10592 Query: 617 aactgcagtattg 629 ||||||||||||| Sbjct: 10591 aactgcagtattg 10579 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 760 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 819 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 9493 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 9434 Query: 820 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 879 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 9433 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 9374 Query: 880 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 939 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 9373 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 9314 Query: 940 tcggcctgactgacagagtcag 961 | ||||| || ||||| ||||| Sbjct: 9313 ttggcctaaccgacagggtcag 9292 Score = 61.9 bits (31), Expect = 6e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 636 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 695 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 9767 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 9708 Query: 696 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 750 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 9707 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 9653 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 9079 tggctgctcatggtagacacaattaagtgaaaataaacaccc 9038
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Minus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 32668527 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 32668468 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 32668467 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 32668408 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 32668407 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 32668348 Query: 1121 tctc 1124 |||| Sbjct: 32668347 tctc 32668344 Score = 129 bits (65), Expect = 3e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 32670344 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 32670285 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 32670284 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 32670225 Query: 559 g 559 | Sbjct: 32670224 g 32670224 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Minus Query: 557 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 616 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 32669887 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 32669828 Query: 617 aactgcagtattg 629 ||||||||||||| Sbjct: 32669827 aactgcagtattg 32669815 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 760 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 819 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 32668729 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 32668670 Query: 820 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 879 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 32668669 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 32668610 Query: 880 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 939 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 32668609 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 32668550 Query: 940 tcggcctgactgacagagtcag 961 | ||||| || ||||| ||||| Sbjct: 32668549 ttggcctaaccgacagggtcag 32668528 Score = 61.9 bits (31), Expect = 6e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 636 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 695 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 32669003 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 32668944 Query: 696 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 750 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 32668943 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 32668889 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 32668315 tggctgctcatggtagacacaattaagtgaaaataaacaccc 32668274
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Minus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 27962 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 27903 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 27902 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 27843 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 27842 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 27783 Query: 1121 tctc 1124 |||| Sbjct: 27782 tctc 27779 Score = 129 bits (65), Expect = 3e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 29779 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 29720 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 29719 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 29660 Query: 559 g 559 | Sbjct: 29659 g 29659 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Minus Query: 557 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 616 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 29322 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 29263 Query: 617 aactgcagtattg 629 ||||||||||||| Sbjct: 29262 aactgcagtattg 29250 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 760 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 819 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 28164 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 28105 Query: 820 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 879 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 28104 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 28045 Query: 880 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 939 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 28044 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 27985 Query: 940 tcggcctgactgacagagtcag 961 | ||||| || ||||| ||||| Sbjct: 27984 ttggcctaaccgacagggtcag 27963 Score = 61.9 bits (31), Expect = 6e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 636 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 695 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 28438 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 28379 Query: 696 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 750 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 28378 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 28324 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 27750 tggctgctcatggtagacacaattaagtgaaaataaacaccc 27709
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Minus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 63548 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 63489 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 63488 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 63429 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 63428 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 63369 Query: 1121 tctc 1124 |||| Sbjct: 63368 tctc 63365 Score = 129 bits (65), Expect = 3e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 439 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 498 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 65365 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 65306 Query: 499 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 558 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 65305 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 65246 Query: 559 g 559 | Sbjct: 65245 g 65245 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Minus Query: 557 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 616 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 64908 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 64849 Query: 617 aactgcagtattg 629 ||||||||||||| Sbjct: 64848 aactgcagtattg 64836 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 760 catgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtcgtgaaga 819 ||||||||||||| |||||||||| || |||||||| | |||||||| || ||||||| Sbjct: 63750 catgccagttcaattccactccacaagaagctttgacgattgctcaggatgttgtgaaga 63691 Query: 820 cgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctagagctttcg 879 | ||||| | ||||||||| |||| |||||||| ||| || ||||||||||||| || | Sbjct: 63690 caatgctagcaaggggatacgtactcagcaaggatgcactggccagggctagagcctttg 63631 Query: 880 acgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagcaggaggc 939 | |||||||| ||| || | | |||| ||||| |||||||| |||||||||| |||| Sbjct: 63630 atgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagcaagagga 63571 Query: 940 tcggcctgactgacagagtcag 961 | ||||| || ||||| ||||| Sbjct: 63570 ttggcctaaccgacagggtcag 63549 Score = 61.9 bits (31), Expect = 6e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 636 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 695 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 64024 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 63965 Query: 696 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 750 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 63964 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 63910 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 63336 tggctgctcatggtagacacaattaagtgaaaataaacaccc 63295
>dbj|AK059892.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D10, full insert sequence Length = 927 Score = 167 bits (84), Expect = 1e-37 Identities = 159/184 (86%) Strand = Plus / Plus Query: 941 cggcctgactgacagagtcagtgctggtgttggcgcaatcagatcagtggacgagacata 1000 |||||| || ||||| ||||| || |||||||| ||||||||||| ||||| |||||||| Sbjct: 330 cggcctaaccgacagggtcagcgccggtgttggtgcaatcagatcggtggatgagacata 389 Query: 1001 ccatgttaccgagacgaccaagaccgtcgccactgccaccggaagaaccgcggtcaaggt 1060 ||| || ||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 390 ccacgtatccgagacgaccaagaccgtcgccaccgccacaggaagaacagcagttaaggt 449 Query: 1061 tatgaacaccatcgtgacgagcagctatttctccgcaggagctatgatgctgtccgaggc 1120 | |||| |||| |||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 450 tgtgaatggcatcatgaccagcagctatttctctgcaggagctatgatgctgtctgatgc 509 Query: 1121 tctc 1124 |||| Sbjct: 510 tctc 513 Score = 161 bits (81), Expect = 8e-36 Identities = 267/329 (81%) Strand = Plus / Plus Query: 633 agtggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgag 692 ||||||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| Sbjct: 1 agtggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaa 60 Query: 693 cctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatatagggac 752 || ||||||||||||| |||| |||| | ||||||||||||||||| ||| | Sbjct: 61 ccatacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggacc 120 Query: 753 taccaatcatgccagttcaacgccactccacaggaggctttgacagtggctcaggacgtc 812 || ||| ||||||||||||| |||||||||| || |||||||| | |||||||| || Sbjct: 121 tatcaaacatgccagttcaattccactccacaagaagctttgacgattgctcaggatgtt 180 Query: 813 gtgaagacgatgctgtcgaggggatacatactgagcaaggacgcattgtccagggctaga 872 |||||||| ||||| | ||||||||| |||| |||||||| ||| || ||||||||||| Sbjct: 181 gtgaagacaatgctagcaaggggatacgtactcagcaaggatgcactggccagggctaga 240 Query: 873 gctttcgacgagtcccaccagttatctggatctgcggcagcaaaggctgcagagctgagc 932 || || || |||||||| ||| || | | |||| ||||| |||||||| ||||||||| Sbjct: 241 gcctttgatgagtcccatcaggtaacagcgactgccgcagccaaggctgcggagctgagc 300 Query: 933 aggaggctcggcctgactgacagagtcag 961 | |||| | ||||| || ||||| ||||| Sbjct: 301 aagaggattggcctaaccgacagggtcag 329 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1153 tggctgctcatggcaggcagaattaagtggaaataaacaccc 1194 ||||||||||||| || || ||||||||| |||||||||||| Sbjct: 542 tggctgctcatggtagacacaattaagtgaaaataaacaccc 583
>emb|AJ293489.1|SHY293489 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR17 Length = 403 Score = 93.7 bits (47), Expect = 2e-15 Identities = 80/91 (87%) Strand = Plus / Minus Query: 469 aagtcactaacctgtcaagcagcgcgtctgaaaatgatcttcatgagttcttctcattct 528 ||||||||||||| || ||||| | ||||||| |||||||||||||||||| || |||| Sbjct: 400 aagtcactaacctctcgagcagagtatctgaaagtgatcttcatgagttcttttcgttct 341 Query: 529 ctggacctattgagcatatagaccttatcag 559 |||| ||||||||||| ||||| |||||||| Sbjct: 340 ctggtcctattgagcacatagaacttatcag 310
>gb|AC013356.8|AC013356 Homo sapiens chromosome 15 clone RP11-64K12 map 15q14, complete sequence Length = 176910 Score = 48.1 bits (24), Expect = 0.088 Identities = 27/28 (96%) Strand = Plus / Plus Query: 12 ccactcccactccacctccacccccaac 39 |||||||||| ||||||||||||||||| Sbjct: 49866 ccactcccaccccacctccacccccaac 49893
>gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, complete sequence Length = 194207 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agaaaaaggaaggataaaaagat 135 ||||||||||||||||||||||| Sbjct: 62755 agaaaaaggaaggataaaaagat 62777
>gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete sequence Length = 70416 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaagga 126 ||||||||||||||||||||||| Sbjct: 62369 gaggagagaagaaaaaggaagga 62347
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence Length = 197397 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 agaaaaaggaaggataaaaagat 135 ||||||||||||||||||||||| Sbjct: 123686 agaaaaaggaaggataaaaagat 123708
>emb|AJ580956.1|CVI580956 Chrysanthemum virus B cp gene for coat protein, isolate Ludhiana (Pb), genomic RNA Length = 949 Score = 46.1 bits (23), Expect = 0.35 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 tccactcccactccacctccaccccca 37 |||||||| |||||||||||||||||| Sbjct: 49 tccactccaactccacctccaccccca 75
>gb|AC154420.2| Mus musculus BAC clone RP24-212L9 from 14, complete sequence Length = 159591 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 aagaaaaaggaaggataaaaaga 134 ||||||||||||||||||||||| Sbjct: 26403 aagaaaaaggaaggataaaaaga 26425
>gb|AC154433.2| Mus musculus BAC clone RP24-182L23 from chromosome 14, complete sequence Length = 166650 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 aagaaaaaggaaggataaaaaga 134 ||||||||||||||||||||||| Sbjct: 137091 aagaaaaaggaaggataaaaaga 137113
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 64 ggcggcggatcacgccgcgcgcgcgc 89 |||||||||||||||||||| ||||| Sbjct: 1372394 ggcggcggatcacgccgcgctcgcgc 1372369
>gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosome 17, complete sequence Length = 173729 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ccactcccactccacctccaccccca 37 |||||||||||||||| ||||||||| Sbjct: 104479 ccactcccactccacccccaccccca 104504
>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2, complete sequence Length = 127371 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 tggcaacacccagacccaccgc 334 |||||||||||||||||||||| Sbjct: 18282 tggcaacacccagacccaccgc 18261
>gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, complete sequence Length = 80766 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gtgaggagagaagaaaaaggaa 123 |||||||||||||||||||||| Sbjct: 59203 gtgaggagagaagaaaaaggaa 59182
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 gcagggagggagggagggcgag 424 |||||||||||||||||||||| Sbjct: 19945 gcagggagggagggagggcgag 19966
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagggagggagggagggcgag 424 |||||||||||||||||||||| Sbjct: 62355 gcagggagggagggagggcgag 62334
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 545 tatagaccttatcagatcagga 566 |||||||||||||||||||||| Sbjct: 104615 tatagaccttatcagatcagga 104636
>gb|AC087057.5| Homo sapiens BAC clone RP11-492K24 from 2, complete sequence Length = 64674 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 aaaaaggaaggataaaaagatg 136 |||||||||||||||||||||| Sbjct: 31296 aaaaaggaaggataaaaagatg 31275
>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence Length = 168738 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 ccactccacctccacccccaac 39 |||||||||||||||||||||| Sbjct: 49218 ccactccacctccacccccaac 49197
>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence Length = 187799 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 agagaagaaaaaggaaggataaaaag 133 ||||||||||| |||||||||||||| Sbjct: 38377 agagaagaaaagggaaggataaaaag 38402
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1123 tcacccgcgccgccaaggccgc 1144 |||||||||||||||||||||| Sbjct: 439100 tcacccgcgccgccaaggccgc 439079
>gb|AY111947.1| Zea mays CL2727_-4 mRNA sequence Length = 516 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1011 gagacgaccaagaccgtcgccactgccaccggaagaac 1048 |||||||||||||| || || |||||||| |||||||| Sbjct: 143 gagacgaccaagacggtagctactgccactggaagaac 180 Score = 44.1 bits (22), Expect = 1.4 Identities = 70/86 (81%) Strand = Plus / Plus Query: 1095 gcaggagctatgatgctgtccgaggctctcacccgcgccgccaaggccgctgaaaatctg 1154 |||||||| |||||| |||| || ||||| || | || ||||||||||| | ||||| Sbjct: 227 gcaggagccatgatgttgtctgatgctcttactagggctgccaaggccgcggctgatctg 286 Query: 1155 gctgctcatggcaggcagaattaagt 1180 || ||||||||||| |||| |||||| Sbjct: 287 gccgctcatggcagacagagttaagt 312
>emb|AL805926.3| Mouse DNA sequence from clone RP24-135N15 on chromosome 2, complete sequence Length = 153183 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaagg 125 |||||||||||||||||||||| Sbjct: 116096 gaggagagaagaaaaaggaagg 116075
>ref|NM_001058023.1| Oryza sativa (japonica cultivar-group) Os03g0786400 (Os03g0786400) mRNA, complete cds Length = 1205 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ctcccactccacctccacccccaac 39 |||||||||||||||| |||||||| Sbjct: 406 ctcccactccacctccgcccccaac 382
>ref|XM_216230.4| PREDICTED: Rattus norvegicus RAD52 homolog (S. cerevisiae) (predicted) (Rad52_predicted), mRNA Length = 1864 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gcactctgcagggagggagggaggg 420 |||||||| |||||||||||||||| Sbjct: 1838 gcactctgaagggagggagggaggg 1814
>emb|BX957339.36| Zebrafish DNA sequence from clone DKEY-285D11 in linkage group 7, complete sequence Length = 163091 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 cgcgcgcgcgcttgcctgcctgcgt 103 ||||||||||| ||||||||||||| Sbjct: 31912 cgcgcgcgcgcgtgcctgcctgcgt 31936
>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence Length = 177860 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 tctgcagggagggagggaggg 420 ||||||||||||||||||||| Sbjct: 36975 tctgcagggagggagggaggg 36995
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 206102 agggagggagggagggcgaga 206082
>gb|AC163338.5| Mus musculus BAC clone RP24-574A13 from chromosome 13, complete sequence Length = 149507 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctccacctccacccccaaccc 41 ||||||||||||||||||||| Sbjct: 39951 ctccacctccacccccaaccc 39971
>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence Length = 211662 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 123919 agggagggagggagggcgaga 123939
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 tctgcagggagggagggaggg 420 ||||||||||||||||||||| Sbjct: 88938 tctgcagggagggagggaggg 88958
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 agagaagaaaaaggaaggata 128 ||||||||||||||||||||| Sbjct: 145468 agagaagaaaaaggaaggata 145488
>ref|XM_868038.1| PREDICTED: Bos taurus similar to gamma-aminobutyric acid (GABA-A) transporter 4 (LOC616071), partial mRNA Length = 1233 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 gcgaggagcaggaggagggac 382 ||||||||||||||||||||| Sbjct: 1183 gcgaggagcaggaggagggac 1163
>gb|AY521556.1| Cancer magister clone Cma8b microsatellite sequence Length = 272 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 93 agggagggagggagggcgaga 73
>gb|AC069469.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence Length = 172786 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctccacctccacccccaaccc 41 ||||||||||||||||||||| Sbjct: 27790 ctccacctccacccccaaccc 27810
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231716 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 197708 agggagggagggagggcgaga 197728
>gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome 7, complete sequence Length = 165569 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctccacctccacccccaaccc 41 ||||||||||||||||||||| Sbjct: 89718 ctccacctccacccccaaccc 89698
>gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, complete sequence Length = 157434 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 agagaagaaaaaggaaggata 128 ||||||||||||||||||||| Sbjct: 39444 agagaagaaaaaggaaggata 39424
>gb|AY466214.1| Litopenaeus vannamei microsatellite TUMXLV7.107 sequence Length = 416 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 agggagggagggcgagaccgc 429 ||||||||||||||||||||| Sbjct: 59 agggagggagggcgagaccgc 39
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 agggagggagggagggcgagaccgcgaga 433 |||||||||||||||| ||||||| |||| Sbjct: 1767 agggagggagggagggagagaccgagaga 1739
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 aggagagaagaaaaaggaaggataa 129 ||||||| ||||||||||||||||| Sbjct: 87102 aggagaggagaaaaaggaaggataa 87078
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 gtgaggagagaagaaaaaggaagga 126 ||||||| ||||||||||||||||| Sbjct: 86691 gtgaggaaagaagaaaaaggaagga 86715
>gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosome 13, complete sequence Length = 160268 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctccacctccacccccaaccc 41 ||||||||||||||||||||| Sbjct: 14418 ctccacctccacccccaaccc 14398
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctcccactccacctccacccccaac 39 |||||||||||||||| |||||||| Sbjct: 76338 ctcccactccacctccgcccccaac 76362
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1123 tcacccgcgccgccaaggccg 1143 ||||||||||||||||||||| Sbjct: 3884789 tcacccgcgccgccaaggccg 3884809
>gb|AC113933.2| Homo sapiens chromosome 3 clone RP11-1006P7, complete sequence Length = 173769 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaag 124 ||||||||||||||||||||| Sbjct: 19660 gaggagagaagaaaaaggaag 19640
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctcccactccacctccacccccaac 39 |||||||||||||||| |||||||| Sbjct: 32433081 ctcccactccacctccgcccccaac 32433105
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ttgtactccctttttcttctc 165 ||||||||||||||||||||| Sbjct: 15621466 ttgtactccctttttcttctc 15621446 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ttgtactccctttttcttctc 165 ||||||||||||||||||||| Sbjct: 15625605 ttgtactccctttttcttctc 15625585
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a programmed cell death 2 (PDCD2) pseudogene, the 5' end of the gene for a novel C2H2 type zinc finger protein and two CpG islands, complete sequence Length = 184302 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaag 124 ||||||||||||||||||||| Sbjct: 32035 gaggagagaagaaaaaggaag 32015
>emb|BX470160.9| Zebrafish DNA sequence from clone DKEY-25F3 in linkage group 18, complete sequence Length = 207501 Score = 42.1 bits (21), Expect = 5.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 104 gaggagagaagaaaaaggaa-ggataaaaagat 135 |||||||| ||||||||||| |||||||||||| Sbjct: 22638 gaggagaggagaaaaaggaatggataaaaagat 22670
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1126 cccgcgccgccaaggccgctg 1146 ||||||||||||||||||||| Sbjct: 82724 cccgcgccgccaaggccgctg 82704
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1126 cccgcgccgccaaggccgctg 1146 ||||||||||||||||||||| Sbjct: 154923 cccgcgccgccaaggccgctg 154943
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1126 cccgcgccgccaaggccgctg 1146 ||||||||||||||||||||| Sbjct: 126159 cccgcgccgccaaggccgctg 126179
>gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, complete sequence Length = 168698 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 52576 agggagggagggagggcgaga 52596
>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence Length = 167631 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 119979 agggagggagggagggcgaga 119999
>emb|BX927295.6| Zebrafish DNA sequence from clone DKEY-7P3 in linkage group 18, complete sequence Length = 71075 Score = 42.1 bits (21), Expect = 5.4 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaa-ggataaaaagat 135 |||||||| ||||||||||| |||||||||||| Sbjct: 24147 gaggagaggagaaaaaggaatggataaaaagat 24115
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ctccacctccacccccaacccgagg 45 ||||||||||||||||| ||||||| Sbjct: 402112 ctccacctccacccccaccccgagg 402088
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 agatcccgtccccggcggcgg 71 ||||||||||||||||||||| Sbjct: 1843336 agatcccgtccccggcggcgg 1843316
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ttgtactccctttttcttctc 165 ||||||||||||||||||||| Sbjct: 59363 ttgtactccctttttcttctc 59343 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ttgtactccctttttcttctc 165 ||||||||||||||||||||| Sbjct: 63502 ttgtactccctttttcttctc 63482
>gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, complete sequence Length = 169041 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 ttcatgagttcttctcattctctgg 532 |||||||||||||||| |||||||| Sbjct: 149865 ttcatgagttcttctccttctctgg 149841
>dbj|BS000106.1| Pan troglodytes chromosome 22 clone:PTB-082I14, map 22, complete sequences Length = 148196 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 agaagaaaaaggaaggataaaaaga 134 ||||| ||||||||||||||||||| Sbjct: 124634 agaaggaaaaggaaggataaaaaga 124610
>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence Length = 168499 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 gaggagagaagaaaaaggaag 124 ||||||||||||||||||||| Sbjct: 106136 gaggagagaagaaaaaggaag 106116
>gb|U58105.1|MMU58105 Mus musculus Btk locus, alpha-D-galactosidase A (Ags), ribosomal protein (L44L), and Bruton's tyrosine kinase (Btk) genes, complete cds Length = 88871 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 4000 agggagggagggagggcgaga 4020
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence Length = 139980 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 508 ttcatgagttcttctcattctctgg 532 |||||||||||||||| |||||||| Sbjct: 86172 ttcatgagttcttctccttctctgg 86196
>dbj|AK067369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D22, full insert sequence Length = 1208 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ctcccactccacctccacccccaac 39 |||||||||||||||| |||||||| Sbjct: 409 ctcccactccacctccgcccccaac 385
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 agggagggagggagggcgagaccgcgaga 433 |||||||||||||||| ||||||| |||| Sbjct: 150169 agggagggagggagggagagaccgagaga 150141
>dbj|AP001694.1| Homo sapiens genomic DNA, chromosome 21q, section 38/105 Length = 340000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 agaagaaaaaggaaggataaaaaga 134 ||||| ||||||||||||||||||| Sbjct: 191939 agaaggaaaaggaaggataaaaaga 191915
>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete sequence Length = 170015 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 ttcatgagttcttctcattctctgg 532 |||||||||||||||| |||||||| Sbjct: 119187 ttcatgagttcttctccttctctgg 119163
>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence Length = 182848 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 cagggagggagggagggcgag 424 ||||||||||||||||||||| Sbjct: 18931 cagggagggagggagggcgag 18951
>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete sequence Length = 194408 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 180941 agggagggagggagggcgaga 180961
>gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, complete sequence Length = 195236 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 gtgaggagagaagaaaaaggaagga 126 ||||||| ||||||||||||||||| Sbjct: 193231 gtgaggaaagaagaaaaaggaagga 193255
>emb|AL627130.13| Mouse DNA sequence from clone RP23-442A20 on chromosome 4, complete sequence Length = 185761 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctccacctccacccccaaccc 41 ||||||||||||||||||||| Sbjct: 72760 ctccacctccacccccaaccc 72740
>dbj|D31781.1|TRUGTGPLAD Trimeresurus gramineus gTgPLA2-V gene for phospholipase A2, complete cds (exon1-4) Length = 2828 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 ctgcagggagggagggagggcgaga 425 |||||||||||||||||||| |||| Sbjct: 1431 ctgcagggagggagggagggagaga 1407
>dbj|D31779.1|TRUGTGPLAB Trimeresurus gramineus gTgPLA6a gene for phospholipase A2, complete cds (exon1-4) Length = 3571 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 ctgcagggagggagggagggcgaga 425 |||||||||||||||||||| |||| Sbjct: 1668 ctgcagggagggagggagggagaga 1644
>dbj|AP000227.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:f2C8/f36H7, complete sequence Length = 23329 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 agaagaaaaaggaaggataaaaaga 134 ||||| ||||||||||||||||||| Sbjct: 8045 agaaggaaaaggaaggataaaaaga 8021
>dbj|AP000139.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone B2291C14-R44F3, segment 4/10, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 agaagaaaaaggaaggataaaaaga 134 ||||| ||||||||||||||||||| Sbjct: 91235 agaaggaaaaggaaggataaaaaga 91211
>dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 2/11 Length = 100000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 ttcatgagttcttctcattctctgg 532 |||||||||||||||| |||||||| Sbjct: 80092 ttcatgagttcttctccttctctgg 80068
>dbj|AP000087.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533 region, segment 4/7 Length = 100000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 agaagaaaaaggaaggataaaaaga 134 ||||| ||||||||||||||||||| Sbjct: 91235 agaaggaaaaggaaggataaaaaga 91211
>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete sequence Length = 132773 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 agggagggagggagggcgaga 425 ||||||||||||||||||||| Sbjct: 76293 agggagggagggagggcgaga 76273 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 234,832,300 Number of extensions: 13490562 Number of successful extensions: 578563 Number of sequences better than 10.0: 90 Number of HSP's gapped: 578541 Number of HSP's successfully gapped: 132 Length of query: 1420 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1397 Effective length of database: 18,503,978,556 Effective search space: 25850058042732 Effective search space used: 25850058042732 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
