>Q91V16:LYRM5_MOUSE LYR motif-containing protein 5 - Mus musculus (Mouse)|
          Length = 86
 Score = 33.9 bits (76), Expect = 0.92
 Identities = 21/64 (32%), Positives = 35/64 (54%)
 Frame = +2

Query: 224 LRARVLKFYRQALRMTRRAPEHARDELRQTVRAEIEKNRHCDDKQKIKFLISEGLQRLKG 403
           LR  VL  Y+  L + R  P+ A D  ++ ++    KN+  +D +KIK LI+ G   +K 
Sbjct: 5   LRGEVLTLYKNLLYLGRDYPKGA-DYFKRRLKNVFLKNKDVEDPEKIKELIARGEFVMKE 63

Query: 404 LDEM 415
           L+ +
Sbjct: 64  LEAL 67

>Q6IPR1:LYRM5_HUMAN LYR motif-containing protein 5 - Homo sapiens (Human)|
          Length = 88

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = +2

Query: 224 LRARVLKFYRQALRMTRRAPEHARDELRQTVRAEIEKNRHCDDKQKIKFLISEGLQRLKG 403
           LR  VLK Y+  L + R  P+ A D  ++ ++    KN+   + +KIK LI++G   +K 
Sbjct: 5   LRGEVLKLYKNLLYLGRDYPKGA-DYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVMKE 63

Query: 404 LDEM 415
           L+ +
Sbjct: 64  LEAL 67

>Q62141:SIN3B_MOUSE Paired amphipathic helix protein Sin3b - Mus musculus (Mouse)|
          Length = 1098

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +2

Query: 104 RPTEQRCPAASVTRGSKWHNHSYLLRCSPMAQFLDLRAF-ILRARVLKFYRQALRMTRRA 280
           RPT+++ PA +     K  +  Y L  +    +  LR    L AR+LK YRQA    ++ 
Sbjct: 687 RPTDEKPPADASPEPPKVLDDVYSLFFANNNWYFFLRLHQTLCARLLKIYRQA---QKQL 743

Query: 281 PEHARDELRQTVRAEIEKNRHCDDKQKIK 367
            EH R++ R+ +  E  + +  D   +++
Sbjct: 744 LEHRREQEREQLLCEGRREKAADPAMELR 772

>Q3IRZ5:URE1_NATPD Urease subunit alpha - Natronomonas pharaonis (strain DSM 2160 /|
           ATCC 35678)
          Length = 570

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -3

Query: 299 HHEHVQGLGESYAVPAYKI*GHAHAK*KPVNPGIEPSENTLIDSCDYAIWILLSHSL 129
           H  H++G G  +A    ++ GH H      NP +  +ENT  +  D    +++ H L
Sbjct: 271 HTFHIEGAGGGHAPDVLELVGHEHMLPSSTNPSMPYTENTFDEHLD---MVMVCHHL 324

>Q9M4U5:HDT2_MAIZE Histone deacetylase HDT2 - Zea mays (Maize)|
          Length = 303

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 49  PTPATGSAIARSDLLSGSSPH-GAAVPCSECDK 144
           P PA G   A +D L+  SP  G +VPC  C K
Sbjct: 252 PHPAKGKTPANNDKLTEKSPKSGGSVPCKSCSK 284


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 163,315,661
Number of extensions: 3663080
Number of successful extensions: 8091
Number of sequences better than 10.0: 5
Number of HSP's gapped: 8089
Number of HSP's successfully gapped: 5
Length of query: 299
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 187
Effective length of database: 69,965,399
Effective search space: 13083529613
Effective search space used: 13083529613
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)