ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf123f16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O88799:ZAN_MOUSE Zonadhesin precursor - Mus musculus (Mouse) 27 9.8

>O88799:ZAN_MOUSE Zonadhesin precursor - Mus musculus (Mouse)|
          Length = 5376
 Score = 27.3 bits (59), Expect(2) = 9.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 553  AQPEPACMASGDMVLASQAEACIC 482
            + PE  C ASG  VL++  E C+C
Sbjct: 3675 SDPEGHCEASGPRVLSTCREGCLC 3698



 Score = 21.9 bits (45), Expect(2) = 9.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 496  EACICMGMVLASQAEAC 446
            ++C CMG V+  Q+  C
Sbjct: 3738 QSCACMGGVVQCQSSQC 3754


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 145,940,511
Number of extensions: 2729885
Number of successful extensions: 6916
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6914
Number of HSP's successfully gapped: 2
Length of query: 394
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 279
Effective length of database: 69,142,514
Effective search space: 19290761406
Effective search space used: 19290761406
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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