ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128i09 |
|---|---|
| Clone Library Name | barley_pub |
>O59767:MAD3_SCHPO Mitotic spindle checkpoint component mad3 - Schizosaccharomyces pombe| (Fission yeast) Length = 310 Score = 130 bits (327), Expect = 1e-29 Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 4/288 (1%) Frame = +3 Query: 171 ETFKENVRPLKRGRNVGLLNQALKAHADPXXXXXXXXXXXXMIEAIDEYQG-EDPLQPWV 347 E KEN+ P K G + L ++ + I+ + +DPLQ W+ Sbjct: 17 EQSKENIEPRKAGHSASALAKSSSRNHTEKEVAGLQKERMGHERKIETSESLDDPLQVWI 76 Query: 348 DCIKWVQESFPAGG-EFSGLVVIYEQCVRAFWHDERYKDDLRYLKVWLEYAGNCSDAEVI 524 D IKW ++FP G + SGLV + E+C R F + YKDD+RYL++W++Y + + Sbjct: 77 DYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYVNYIDEPVEL 136 Query: 525 FRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIARKAKPVEKLETTYRAFLR 704 F FL + IG+ ++FY YA ES+ +KADE++ G KAKP + + Y+ F Sbjct: 137 FSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTH 196 Query: 705 R--STKKKGHEDDTASDNQPIRKFGSDLNRGDTRGQHAENSHLLAKPRVTLQRFDFNTQI 878 R + +T S N F S T Q S + +++ +F F Sbjct: 197 RWLEFAPQSFSSNTNSVNPLQTTFES------TNIQEISQS----RTKISKPKFKF---- 242 Query: 879 SIYKENPLPSQGLERARSKDKTWNTLGTQADRNKENNMMPARWTSHKI 1022 S+Y + G + + TW TLGT R KENN+ W K+ Sbjct: 243 SVYSD--ADGSGKD---GQPGTWQTLGTVDQRRKENNISATSWVGEKL 285
>Q9Z1S0:BUB1B_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 beta - Mus| musculus (Mouse) Length = 1052 Score = 130 bits (327), Expect = 1e-29 Identities = 87/310 (28%), Positives = 152/310 (49%), Gaps = 18/310 (5%) Frame = +3 Query: 144 APVAVC---GEWETFKENVRPLKRGRNVGLLNQALKAHADPXXXXXXXXXXXXMIEAIDE 314 A A+C EWE KEN++PL+ GR + L AL A + I Sbjct: 4 ASEAMCLEGAEWELSKENIQPLRHGRVMSTLQGAL-AKQESAGHTALQQQKRAFESEIRF 62 Query: 315 YQGEDPLQPWVDCIKWVQESFPAGGEFSGLVVIYEQCVRAFWHDERYKDDLRYLKVWLEY 494 Y G+DPL W I W ++++P GG+ S + + E+ + A + RY +D R+L +W++ Sbjct: 63 YSGDDPLDVWDRYINWTEQNYPQGGKESNMSALVERAIEALQGETRYYNDPRFLSLWIKL 122 Query: 495 AGNCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIARKAKPVEK 674 C++ ++ +L+S IG A FYI +A E++ KKAD IF GI RKA+P+++ Sbjct: 123 GHLCNEPLDMYSYLQSQGIGVSLAQFYISWAEEYEARENFKKADIIFQEGIERKAEPLDR 182 Query: 675 LETTYRAFLRRSTKKK----GHEDDTASD-NQPIRKFGSDLNRGDTRGQHAENSHLLAKP 839 L++ +R F R +++ G+E++ A + ++P R ++L + A S + Sbjct: 183 LQSQHRQFQSRVSRQAFLALGNEEEEALEPSEPQRSSLAELKSRGKKMARAPISRVGGAL 242 Query: 840 RVTLQRFDF----------NTQISIYKENPLPSQGLERARSKDKTWNTLGTQADRNKENN 989 + Q F N +I+++ EN + E ++ + W + R KEN Sbjct: 243 KAPGQSRGFLNAVPQPVHGNRRITVFDENADTTSRPELSKPVAQPW--MAPPVPRAKENE 300 Query: 990 MMPARWTSHK 1019 + P W++ + Sbjct: 301 LQPGPWSTDR 310
>O60566:BUB1B_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 beta - Homo| sapiens (Human) Length = 1050 Score = 120 bits (302), Expect = 1e-26 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Frame = +3 Query: 165 EWETFKENVRPLKRGRNVGLLNQALKAHADPXXXXXXXXXXXXMIEAIDEYQGEDPLQPW 344 EWE KENV+PL++GR + L AL + I Y G DPL W Sbjct: 21 EWELSKENVQPLRQGRIMSTLQGALAQES--ACNNTLQQQKRAFEYEIRFYTGNDPLDVW 78 Query: 345 VDCIKWVQESFPAGGEFSGLVVIYEQCVRAFWHDERYKDDLRYLKVWLEYAGNCSDAEVI 524 I W ++++P GG+ S + + E+ V A ++RY D R+L +WL+ C++ + Sbjct: 79 DRYISWTEQNYPQGGKESNMSTLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCNEPLDM 138 Query: 525 FRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIARKAKPVEKLETTYRAFLR 704 + +L + IG A FYI +A E++ +KAD IF GI +KA+P+E+L++ +R F Sbjct: 139 YSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQA 198 Query: 705 RSTK------KKGHEDDTASDNQPIRKFGSDL---NRGDTRGQHAENSHLLAKPRVTL-- 851 R ++ +K E++ + P R ++L + R L P Sbjct: 199 RVSRQTLLALEKEEEEEVFESSVPQRSTLAELKSKGKKTARAPIIRVGGALKAPSQNRGL 258 Query: 852 -----QRFDFNTQISIYKENPLPSQGLERARSKDKTWNTLGTQADRNKENNMMPARWTS 1013 Q+ N++I+++ EN + E ++ + W + R KEN + W + Sbjct: 259 QNPFPQQMQNNSRITVFDENADEASTAELSKPTVQPW--IAPPMPRAKENELQAGPWNT 315
>P47074:MAD3_YEAST Spindle assembly checkpoint component MAD3 - Saccharomyces| cerevisiae (Baker's yeast) Length = 515 Score = 99.8 bits (247), Expect = 3e-20 Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 14/290 (4%) Frame = +3 Query: 165 EWETFKENVRPLKRGRNVGLLNQALKAHADPXXXXXXXXXXXXMIEAIDEYQG-EDPLQP 341 E ET KEN+ PLK GR+ L++A+ P IDE DP+ Sbjct: 25 EIETQKENILPLKEGRSAAALSKAIH---QPLVEINQVKSSFEQ-RLIDELPALSDPITL 80 Query: 342 WVDCIKWVQESFPAGGEF--SGLVVIYEQCVRAFWHDERYKDDLRYLKVWLEYA-----G 500 +++ IKW+ ++P GG SG++ + E+C+ ERY++D+R+LK+W Y Sbjct: 81 YLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELFTRN 140 Query: 501 NCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIARKAKPVEKLE 680 + ++ IF ++ N IG A FY + L+ K K + A +I LGI KA+P + LE Sbjct: 141 SFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLGIKNKARPNKVLE 200 Query: 681 TTYRAFLR---RSTKKKGHEDDTAS-DNQPIRKFGSD-LNRGDTRGQHAENSHL-LAKPR 842 LR + + G+E S ++ + K S+ +NR + Q+ +S + L K Sbjct: 201 DRLNHLLRELGENNIQLGNEISMDSLESTVLGKTRSEFVNRLELANQNGTSSDVNLTKNN 260 Query: 843 VTLQRFDFNTQISIYKENPLPSQGLERARSKDKTWNTLGTQADRNKENNM 992 V + + + ++ P++G+ R W +A+RNKENN+ Sbjct: 261 VFVDGEESDVELF-----ETPNRGVYR-----DGWENFDLKAERNKENNL 300
>O08901:BUB1_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 - Mus| musculus (Mouse) Length = 1058 Score = 90.5 bits (223), Expect = 2e-17 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%) Frame = +3 Query: 294 MIEA-IDEYQGEDPLQPWVDCIKWVQESFPAGGEFSGLVVIYEQCVRAFWHDERYKDDLR 470 M EA + Y G DPL W IKWV+E+FP E+ L+ + E ++ F H + Y +D R Sbjct: 10 MFEAHMQSYTGNDPLGEWESFIKWVEENFPDNKEY--LMTLLEHLMKEFLHKKNYHNDSR 67 Query: 471 YLKVWLEYAGNCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIA 650 ++ L++A SD F FL + IG + Y+ +A +E++ +L+ A IF GI Sbjct: 68 FINYCLKFAEYNSDRHQFFEFLYNQGIGTKSSYIYMSWAGHLEAQGELQHASAIFQTGIH 127 Query: 651 RKAKPVEKLETTYRAFLRRST 713 +A+P E L+ YR F R T Sbjct: 128 NEAEPKELLQQQYRLFQARLT 148
>O43683:BUB1_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 - Homo| sapiens (Human) Length = 1085 Score = 85.5 bits (210), Expect = 5e-16 Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 1/157 (0%) Frame = +3 Query: 294 MIEA-IDEYQGEDPLQPWVDCIKWVQESFPAGGEFSGLVVIYEQCVRAFWHDERYKDDLR 470 M+EA + Y+G DPL W I+WV+E+FP E+ L+ + E ++ F ++Y +D R Sbjct: 10 MLEAHMQSYKGNDPLGEWERYIQWVEENFPENKEY--LITLLEHLMKEFLDKKKYHNDPR 67 Query: 471 YLKVWLEYAGNCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIA 650 ++ L++A SD F FL ++ IG + YI +A +E++ +L+ A + GI Sbjct: 68 FISYCLKFAEYNSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQ 127 Query: 651 RKAKPVEKLETTYRAFLRRSTKKKGHEDDTASDNQPI 761 +A+P E L+ YR F R T+ H A ++P+ Sbjct: 128 NQAEPREFLQQQYRLFQTRLTET--HLPAQARTSEPL 162
>P41695:BUB1_YEAST Checkpoint serine/threonine-protein kinase BUB1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1021 Score = 56.2 bits (134), Expect = 3e-07 Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 8/126 (6%) Frame = +3 Query: 324 EDPLQPWVDCIKWVQESFPAGGEFSGLVVI---YEQCVRAFWHDERYKDDLRYLKVWLEY 494 +DPL ++D + W+ S+ SG V+ E+C+ E Y++D R+LK+W+ Y Sbjct: 55 DDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCLIYIQDMETYRNDPRFLKIWIWY 114 Query: 495 -----AGNCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIARKA 659 + N ++E F+++ + IG ++FY ++ L+E+ +A + LG Sbjct: 115 INLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 174 Query: 660 KPVEKL 677 +P +L Sbjct: 175 RPYNRL 180
>O94751:BUB1_SCHPO Checkpoint serine/threonine-protein kinase bub1 -| Schizosaccharomyces pombe (Fission yeast) Length = 1044 Score = 50.4 bits (119), Expect = 2e-05 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 10/145 (6%) Frame = +3 Query: 324 EDPLQPWVDCIKWVQESFPAGGEFSGLVVIYEQCVRAFWHDERYK---DDLRYLKVWL-- 488 +DP+ W CI+W+ E+ F G+ + + A + ER + +D+R+L + L Sbjct: 47 DDPVDVWYRCIEWLLET-----RFLGMETVNKMLDDAIQYLERCRFALNDVRHLLIQLAK 101 Query: 489 -----EYAGNCSDAEVIFRFLESNQIGEGHAVFYIRYALLMESKNKLKKADEIFVLGIAR 653 E A F L S IG A+FY Y L+ + K+A E+F ++R Sbjct: 102 IKQSYETPDELQQAAKQFYQLASKGIGLELALFYEEYGSLLIRMQRWKEASEVFHAAVSR 161 Query: 654 KAKPVEKLETTYRAFLRRSTKKKGH 728 +A+P+ +L F R H Sbjct: 162 EARPLVRLLRNAAEFSRAYDLHNAH 186
>Q1D777:EFG2_MYXXD Elongation factor G 2 - Myxococcus xanthus (strain DK 1622)| Length = 691 Score = 31.6 bits (70), Expect = 8.8 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 1267 QKKTFTYLRLLSGKLRSGFSLSNSVSFLRFLLVACLSFRTD 1145 Q +T T+LR+ SGKL +G ++ NSV R + + R D Sbjct: 326 QSQTLTFLRVYSGKLEAGTAVWNSVKGKRERISRLVQMRAD 366 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 215,564,118 Number of extensions: 4328661 Number of successful extensions: 9824 Number of sequences better than 10.0: 9 Number of HSP's gapped: 9812 Number of HSP's successfully gapped: 9 Length of query: 485 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 368 Effective length of database: 68,593,924 Effective search space: 25242564032 Effective search space used: 25242564032 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
