| Clone Name | FLbaf128i09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052706.1| Oryza sativa (japonica cultivar-group) Os02g0193600 (Os02g0193600) mRNA, complete cds Length = 1494 Score = 500 bits (252), Expect = e-138 Identities = 563/666 (84%), Gaps = 3/666 (0%) Strand = Plus / Plus Query: 165 gagtgggagaccttcaaggagaacgtgcggccgctgaaacgcgggcggaacgtcggcctc 224 ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||| Sbjct: 203 gagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctc 262 Query: 225 ctcaaccaggccctcaaggcgcacgccgaccccgcccagcgtgccgccctcctcgccgaa 284 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 ctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccgcc 322 Query: 285 cgcaggaggatgatcgaagcaatcgatgagtaccaaggggaagatccgctccagccgtgg 344 || |||| |||||||| |||||||| || ||| || || ||||||||||| || ||| Sbjct: 323 cggaggaaaatgatcgaggcaatcgacgaatacagcggcgaggatccgctccaaccatgg 382 Query: 345 gtagactgcatcaaatgggttcaggagtcgttcccggccggcggggagttctcagggctg 404 ||||||||||||||||||||||||||||||| ||| | |||||||| | ||| ||| || Sbjct: 383 atagactgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttg 442 Query: 405 gtcgtcatctacgagcagtgtgtgcgtgccttctggcatgacgagcggtacaaggacgac 464 || || |||||||||||||| ||||||||||||||||| ||||| || |||||| |||| Sbjct: 443 gtggtgatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgat 502 Query: 465 ctccggtacctcaaagtgtggttagaatacgctgggaactgttcggacgctgaggtgata 524 ||||| ||||||||||||||| | ||||| || ||||| ||| | || | ||||||||| Sbjct: 503 ctccgctacctcaaagtgtggctggaatatgcggggaattgtgctgattccgaggtgata 562 Query: 525 ttcaggttcctagagtccaaccagattggtgagggccatgctgttttctacattcgctat 584 ||||||||||| ||| |||||||||||||| || ||||| | || |||| | |||| Sbjct: 563 ttcaggttcctggaggccaaccagattggtcagagccataccaattactacttgtcctat 622 Query: 585 gcgttgctaatggagtcgaagaacaagcttaagaaagctgacgagatctttgttcttgga 644 |||| | |||||||||| ||||||||||| ||||||||| | ||||| ||| ||||| Sbjct: 623 gcgtcggtaatggagtccaagaacaagctaaagaaagctaatgagatttttaaccttggt 682 Query: 645 atagctaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcgg 704 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 683 attgccaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcag 742 Query: 705 agatcaaccaaaaagaagggaca---cgaggatgatacggcaagtgacaatcagccaata 761 |||||| |||||||||||| ||| |||||||| || | | ||| |||| ||| || Sbjct: 743 agatcatccaaaaagaaggcacatcctgaggatgacacaactactgatgatcatccagta 802 Query: 762 cgcaaattcggtagtgacttgaaccgtggtgacaccagaggtcagcatgcagagaattca 821 ||||| || || | || ||||||||||||||| | |||||| ||||||||||| || || Sbjct: 803 cgcaactttgggactgtcttgaaccgtggtgaaatcagaggccagcatgcagaaaactct 862 Query: 822 cacctg 827 |||||| Sbjct: 863 cacctg 868 Score = 234 bits (118), Expect = 7e-58 Identities = 255/300 (85%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 951 acccttggaacacaagcagatagaaacaaagaaaataacatgatgcctgccagatggact 1010 ||||||||| ||||||||||| | ||||||||||||||||||| |||||| | |||||| Sbjct: 983 acccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggaca 1042 Query: 1011 tcccacaagattccaccgaaggtagcagcacggccagcagttccgccagctcgtgtcagc 1070 || ||||||||||| | |||||| | | | || ||||||||| ||| ||||||| ||| Sbjct: 1043 tcacacaagattcctcagaaggttggatcgagggcagcagttcagccgactcgtgtaagc 1102 Query: 1071 tccattgaggtcttcatagatgacgaatgtgccgaggaaccagccccgcctcaagtgccc 1130 |||||||| |||||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 1103 tccattgaagtcttcgtagatgacgaatgcgccgaggaaccag---ttccccaagtgcca 1159 Query: 1131 aagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaaccttaagaag 1190 |||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 1160 aagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaacctcaagcag 1219 Query: 1191 gaaacagaattgcttaaggagaacccactgcgcaacttcccgctgagcagccttagataa 1250 ||||| ||| |||||| |||||| || ||||| || ||||| || | ||||||||||||| Sbjct: 1220 gaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagataa 1279 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1302 aaataagctttagactctaaagctta 1327 ||||||||||||| |||||||||||| Sbjct: 1359 aaataagctttagcctctaaagctta 1384
>dbj|AK060499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E12, full insert sequence Length = 1494 Score = 500 bits (252), Expect = e-138 Identities = 563/666 (84%), Gaps = 3/666 (0%) Strand = Plus / Plus Query: 165 gagtgggagaccttcaaggagaacgtgcggccgctgaaacgcgggcggaacgtcggcctc 224 ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||| Sbjct: 203 gagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctc 262 Query: 225 ctcaaccaggccctcaaggcgcacgccgaccccgcccagcgtgccgccctcctcgccgaa 284 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 ctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccgcc 322 Query: 285 cgcaggaggatgatcgaagcaatcgatgagtaccaaggggaagatccgctccagccgtgg 344 || |||| |||||||| |||||||| || ||| || || ||||||||||| || ||| Sbjct: 323 cggaggaaaatgatcgaggcaatcgacgaatacagcggcgaggatccgctccaaccatgg 382 Query: 345 gtagactgcatcaaatgggttcaggagtcgttcccggccggcggggagttctcagggctg 404 ||||||||||||||||||||||||||||||| ||| | |||||||| | ||| ||| || Sbjct: 383 atagactgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttg 442 Query: 405 gtcgtcatctacgagcagtgtgtgcgtgccttctggcatgacgagcggtacaaggacgac 464 || || |||||||||||||| ||||||||||||||||| ||||| || |||||| |||| Sbjct: 443 gtggtgatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgat 502 Query: 465 ctccggtacctcaaagtgtggttagaatacgctgggaactgttcggacgctgaggtgata 524 ||||| ||||||||||||||| | ||||| || ||||| ||| | || | ||||||||| Sbjct: 503 ctccgctacctcaaagtgtggctggaatatgcggggaattgtgctgattccgaggtgata 562 Query: 525 ttcaggttcctagagtccaaccagattggtgagggccatgctgttttctacattcgctat 584 ||||||||||| ||| |||||||||||||| || ||||| | || |||| | |||| Sbjct: 563 ttcaggttcctggaggccaaccagattggtcagagccataccaattactacttgtcctat 622 Query: 585 gcgttgctaatggagtcgaagaacaagcttaagaaagctgacgagatctttgttcttgga 644 |||| | |||||||||| ||||||||||| ||||||||| | ||||| ||| ||||| Sbjct: 623 gcgtcggtaatggagtccaagaacaagctaaagaaagctaatgagatttttaaccttggt 682 Query: 645 atagctaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcgg 704 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 683 attgccaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcag 742 Query: 705 agatcaaccaaaaagaagggaca---cgaggatgatacggcaagtgacaatcagccaata 761 |||||| |||||||||||| ||| |||||||| || | | ||| |||| ||| || Sbjct: 743 agatcatccaaaaagaaggcacatcctgaggatgacacaactactgatgatcatccagta 802 Query: 762 cgcaaattcggtagtgacttgaaccgtggtgacaccagaggtcagcatgcagagaattca 821 ||||| || || | || ||||||||||||||| | |||||| ||||||||||| || || Sbjct: 803 cgcaactttgggactgtcttgaaccgtggtgaaatcagaggccagcatgcagaaaactct 862 Query: 822 cacctg 827 |||||| Sbjct: 863 cacctg 868 Score = 234 bits (118), Expect = 7e-58 Identities = 255/300 (85%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 951 acccttggaacacaagcagatagaaacaaagaaaataacatgatgcctgccagatggact 1010 ||||||||| ||||||||||| | ||||||||||||||||||| |||||| | |||||| Sbjct: 983 acccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggaca 1042 Query: 1011 tcccacaagattccaccgaaggtagcagcacggccagcagttccgccagctcgtgtcagc 1070 || ||||||||||| | |||||| | | | || ||||||||| ||| ||||||| ||| Sbjct: 1043 tcacacaagattcctcagaaggttggatcgagggcagcagttcagccgactcgtgtaagc 1102 Query: 1071 tccattgaggtcttcatagatgacgaatgtgccgaggaaccagccccgcctcaagtgccc 1130 |||||||| |||||| ||||||||||||| ||||||||||||| || |||||||| Sbjct: 1103 tccattgaagtcttcgtagatgacgaatgcgccgaggaaccag---ttccccaagtgcca 1159 Query: 1131 aagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaaccttaagaag 1190 |||||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| || Sbjct: 1160 aagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaacctcaagcag 1219 Query: 1191 gaaacagaattgcttaaggagaacccactgcgcaacttcccgctgagcagccttagataa 1250 ||||| ||| |||||| |||||| || ||||| || ||||| || | ||||||||||||| Sbjct: 1220 gaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagataa 1279 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1302 aaataagctttagactctaaagctta 1327 ||||||||||||| |||||||||||| Sbjct: 1359 aaataagctttagcctctaaagctta 1384
>gb|AY111081.1| Zea mays CL20913_1 mRNA sequence Length = 606 Score = 210 bits (106), Expect = 1e-50 Identities = 328/402 (81%) Strand = Plus / Plus Query: 164 cgagtgggagaccttcaaggagaacgtgcggccgctgaaacgcgggcggaacgtcggcct 223 |||||| |||| ||||||||||||| | ||||||| || |||||||| |||| | Sbjct: 134 cgagtgcgagaagttcaaggagaacgcgaggccgctcaagcgcgggcgcgacgtgtccaa 193 Query: 224 cctcaaccaggccctcaaggcgcacgccgaccccgcccagcgtgccgccctcctcgccga 283 |||||||| || |||||||| |||||||| ||||||||||| ||| | || |||| | Sbjct: 194 actcaaccacgcgctcaaggcacacgccgatcccgcccagcgcgccactcttctcgaagc 253 Query: 284 acgcaggaggatgatcgaagcaatcgatgagtaccaaggggaagatccgctccagccgtg 343 || | || |||||| || |||||| | ||||||||||| || ||||||||||| ||||| Sbjct: 254 ccgaaagaagatgattgaggcaatctacgagtaccaaggcgaggatccgctccaaccgtg 313 Query: 344 ggtagactgcatcaaatgggttcaggagtcgttcccggccggcggggagttctcagggct 403 | | ||||||||||| ||||| ||||||| || ||| ||||||| |||| ||||||| | Sbjct: 314 gctggactgcatcaagtgggtgcaggagtattttccgaccggcggcgagtgctcagggtt 373 Query: 404 ggtcgtcatctacgagcagtgtgtgcgtgccttctggcatgacgagcggtacaaggacga 463 ||| || | ||||||||||| ||||| |||| | | | |||||||| ||||||||||| Sbjct: 374 ggtggtgttgtacgagcagtgcgtgcggaccttattggacgacgagcgctacaaggacga 433 Query: 464 cctccggtacctcaaagtgtggttagaatacgctgggaactgttcggacgctgaggtgat 523 |||||| | ||||||||||||| | |||||||| ||||||||| | || |||||||| || Sbjct: 434 cctccgcttcctcaaagtgtggctggaatacgcggggaactgtgctgatgctgaggtaat 493 Query: 524 attcaggttcctagagtccaaccagattggtgagggccatgc 565 || ||||||||| ||| ||||||||||||| |||||||||| Sbjct: 494 atacaggttcctggaggccaaccagattgggcagggccatgc 535
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 170 bits (86), Expect = 9e-39 Identities = 110/118 (93%) Strand = Plus / Plus Query: 165 gagtgggagaccttcaaggagaacgtgcggccgctgaaacgcgggcggaacgtcggcctc 224 ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||| Sbjct: 5209433 gagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctc 5209492 Query: 225 ctcaaccaggccctcaaggcgcacgccgaccccgcccagcgtgccgccctcctcgccg 282 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5209493 ctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccg 5209550 Score = 143 bits (72), Expect = 2e-30 Identities = 120/136 (88%) Strand = Plus / Plus Query: 350 ctgcatcaaatgggttcaggagtcgttcccggccggcggggagttctcagggctggtcgt 409 ||||||||||||||||||||||||||| ||| | |||||||| | ||| ||| |||| || Sbjct: 5209894 ctgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttggtggt 5209953 Query: 410 catctacgagcagtgtgtgcgtgccttctggcatgacgagcggtacaaggacgacctccg 469 |||||||||||||| ||||||||||||||||| ||||| || |||||| |||| ||||| Sbjct: 5209954 gatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgatctccg 5210013 Query: 470 gtacctcaaagtgtgg 485 ||||||||||||||| Sbjct: 5210014 ctacctcaaagtgtgg 5210029 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 651 aggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcggagatca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5210988 aggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcagagatca 5211047 Query: 711 accaaaaagaagg 723 |||||||||||| Sbjct: 5211048 tccaaaaagaagg 5211060 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 5211929 caagtgccaaagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaac 5211988 Query: 1182 ct 1183 || Sbjct: 5211989 ct 5211990 Score = 79.8 bits (40), Expect = 3e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 516 gaggtgatattcaggttcctagagtccaaccagattggtgagggccatgctgttttctac 575 |||||||||||||||||||| ||| |||||||||||||| || ||||| | || |||| Sbjct: 5210170 gaggtgatattcaggttcctggaggccaaccagattggtcagagccataccaattactac 5210229 Query: 576 attcgctatgcgttgctaatggagtcgaagaacaagcttaagaaagct 623 | |||||||| | |||||||||| ||||||||||| ||||||||| Sbjct: 5210230 ttgtcctatgcgtcggtaatggagtccaagaacaagctaaagaaagct 5210277 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 951 acccttggaacacaagcagatagaaacaaagaaaataacatgatgcctgccagatggact 1010 ||||||||| ||||||||||| | ||||||||||||||||||| |||||| | |||||| Sbjct: 5211538 acccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggaca 5211597 Query: 1011 tcccacaag 1019 || |||||| Sbjct: 5211598 tcacacaag 5211606 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1045 cagcagttccgccagctcgtgtcagctccattgaggtcttcatagatgacgaatgtgccg 1104 ||||||||| ||| ||||||| ||||||||||| |||||| ||||||||||||| |||| Sbjct: 5211754 cagcagttcagccgactcgtgtaagctccattgaagtcttcgtagatgacgaatgcgccg 5211813 Query: 1105 ag 1106 || Sbjct: 5211814 ag 5211815 Score = 58.0 bits (29), Expect = 9e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| | || ||||||||| |||||||| ||| |||| Sbjct: 5216064 caagtgccaaagagttcaaaaccatctatcctaaagcttaggaaagcaacacgcagaaac 5216123 Query: 1182 c 1182 | Sbjct: 5216124 c 5216124 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1302 aaataagctttagactctaaagctta 1327 ||||||||||||| |||||||||||| Sbjct: 5212224 aaataagctttagcctctaaagctta 5212249 Score = 42.1 bits (21), Expect = 5.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1190 ggaaacagaattgcttaaggagaacccactgcgcaacttcccgctgagcagccttagata 1249 |||||| ||| |||||| |||||| || ||||| || ||||| || | |||||||||||| Sbjct: 5212084 ggaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagata 5212143 Query: 1250 a 1250 | Sbjct: 5212144 a 5212144
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 170 bits (86), Expect = 9e-39 Identities = 110/118 (93%) Strand = Plus / Plus Query: 165 gagtgggagaccttcaaggagaacgtgcggccgctgaaacgcgggcggaacgtcggcctc 224 ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||| Sbjct: 102886 gagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctc 102945 Query: 225 ctcaaccaggccctcaaggcgcacgccgaccccgcccagcgtgccgccctcctcgccg 282 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 102946 ctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccg 103003 Score = 143 bits (72), Expect = 2e-30 Identities = 120/136 (88%) Strand = Plus / Plus Query: 350 ctgcatcaaatgggttcaggagtcgttcccggccggcggggagttctcagggctggtcgt 409 ||||||||||||||||||||||||||| ||| | |||||||| | ||| ||| |||| || Sbjct: 103347 ctgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttggtggt 103406 Query: 410 catctacgagcagtgtgtgcgtgccttctggcatgacgagcggtacaaggacgacctccg 469 |||||||||||||| ||||||||||||||||| ||||| || |||||| |||| ||||| Sbjct: 103407 gatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgatctccg 103466 Query: 470 gtacctcaaagtgtgg 485 ||||||||||||||| Sbjct: 103467 ctacctcaaagtgtgg 103482 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 651 aggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcggagatca 710 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104441 aggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcagagatca 104500 Query: 711 accaaaaagaagg 723 |||||||||||| Sbjct: 104501 tccaaaaagaagg 104513 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 105382 caagtgccaaagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaac 105441 Query: 1182 ct 1183 || Sbjct: 105442 ct 105443 Score = 79.8 bits (40), Expect = 3e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 516 gaggtgatattcaggttcctagagtccaaccagattggtgagggccatgctgttttctac 575 |||||||||||||||||||| ||| |||||||||||||| || ||||| | || |||| Sbjct: 103623 gaggtgatattcaggttcctggaggccaaccagattggtcagagccataccaattactac 103682 Query: 576 attcgctatgcgttgctaatggagtcgaagaacaagcttaagaaagct 623 | |||||||| | |||||||||| ||||||||||| ||||||||| Sbjct: 103683 ttgtcctatgcgtcggtaatggagtccaagaacaagctaaagaaagct 103730 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 951 acccttggaacacaagcagatagaaacaaagaaaataacatgatgcctgccagatggact 1010 ||||||||| ||||||||||| | ||||||||||||||||||| |||||| | |||||| Sbjct: 104991 acccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggaca 105050 Query: 1011 tcccacaag 1019 || |||||| Sbjct: 105051 tcacacaag 105059 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1045 cagcagttccgccagctcgtgtcagctccattgaggtcttcatagatgacgaatgtgccg 1104 ||||||||| ||| ||||||| ||||||||||| |||||| ||||||||||||| |||| Sbjct: 105207 cagcagttcagccgactcgtgtaagctccattgaagtcttcgtagatgacgaatgcgccg 105266 Query: 1105 ag 1106 || Sbjct: 105267 ag 105268 Score = 58.0 bits (29), Expect = 9e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| | || ||||||||| |||||||| ||| |||| Sbjct: 109517 caagtgccaaagagttcaaaaccatctatcctaaagcttaggaaagcaacacgcagaaac 109576 Query: 1182 c 1182 | Sbjct: 109577 c 109577 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1302 aaataagctttagactctaaagctta 1327 ||||||||||||| |||||||||||| Sbjct: 105677 aaataagctttagcctctaaagctta 105702 Score = 42.1 bits (21), Expect = 5.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1190 ggaaacagaattgcttaaggagaacccactgcgcaacttcccgctgagcagccttagata 1249 |||||| ||| |||||| |||||| || ||||| || ||||| || | |||||||||||| Sbjct: 105537 ggaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagata 105596 Query: 1250 a 1250 | Sbjct: 105597 a 105597
>ref|NM_001059496.1| Oryza sativa (japonica cultivar-group) Os04g0454900 (Os04g0454900) mRNA, complete cds Length = 1252 Score = 123 bits (62), Expect = 2e-24 Identities = 136/160 (85%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1072 ccattgaggtcttcatagatgacgaatgtgccgaggaaccagccccgcctcaagtgccca 1131 |||||||||| ||| ||||||| |||||||| | | ||||||| || | ||||||| | Sbjct: 455 ccattgaggtgttcgtagatgatgaatgtgctgggaaaccagctcccc---aagtgccaa 511 Query: 1132 agagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaaccttaagaagg 1191 ||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||| || Sbjct: 512 agagttcaaaaccatctattatgaagcttaggcaagcaacaagcagaaacctcaagcggg 571 Query: 1192 aaacagaattgcttaaggagaacccactgcgcaacttccc 1231 ||| ||| |||||| ||||||||||| |||||||||||| Sbjct: 572 aaattgaactgcttatggagaacccacagcgcaacttccc 611
>dbj|AK073191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016G07, full insert sequence Length = 1253 Score = 123 bits (62), Expect = 2e-24 Identities = 136/160 (85%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1072 ccattgaggtcttcatagatgacgaatgtgccgaggaaccagccccgcctcaagtgccca 1131 |||||||||| ||| ||||||| |||||||| | | ||||||| || | ||||||| | Sbjct: 456 ccattgaggtgttcgtagatgatgaatgtgctgggaaaccagctcccc---aagtgccaa 512 Query: 1132 agagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaaccttaagaagg 1191 ||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||| || Sbjct: 513 agagttcaaaaccatctattatgaagcttaggcaagcaacaagcagaaacctcaagcggg 572 Query: 1192 aaacagaattgcttaaggagaacccactgcgcaacttccc 1231 ||| ||| |||||| ||||||||||| |||||||||||| Sbjct: 573 aaattgaactgcttatggagaacccacagcgcaacttccc 612
>gb|AY111151.1| Zea mays CL20913_-2 mRNA sequence Length = 457 Score = 107 bits (54), Expect = 1e-19 Identities = 123/146 (84%) Strand = Plus / Plus Query: 420 cagtgtgtgcgtgccttctggcatgacgagcggtacaaggacgacctccggtacctcaaa 479 ||||| ||||| |||| ||||| |||||||| |||||||||||| |||| | |||||| Sbjct: 229 cagtgggtgcggaccttatggcacgacgagcgctacaaggacgacatccgctttctcaaa 288 Query: 480 gtgtggttagaatacgctgggaactgttcggacgctgaggtgatattcaggttcctagag 539 |||||| | |||||||||||||||||| | || || ||||| | || ||||||||| ||| Sbjct: 289 gtgtggctggaatacgctgggaactgtgctgatgccgaggtaacatacaggttcctggag 348 Query: 540 tccaaccagattggtgagggccatgc 565 ||||||||||||| |||||||||| Sbjct: 349 gccaaccagattgggcagggccatgc 374 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 293 gatgatcgaagcaatcgatgagtaccaaggggaagatccgctccagccgtgggtagactg 352 ||||||||| |||||| | ||||||| ||| || ||||||||||| |||||| | ||||| Sbjct: 130 gatgatcgaggcaatctacgagtaccgaggcgaggatccgctccaaccgtggctggactg 189 Query: 353 catcaaatgggttcaggagtcgttcccggccggcgg 388 |||||| ||||| |||||||| |||||| ||||||| Sbjct: 190 catcaagtgggtccaggagtcattcccgaccggcgg 225 Score = 46.1 bits (23), Expect = 0.36 Identities = 29/31 (93%) Strand = Plus / Plus Query: 180 aaggagaacgtgcggccgctgaaacgcgggc 210 |||||||||||||||||||| || ||||||| Sbjct: 13 aaggagaacgtgcggccgctcaagcgcgggc 43
>emb|CR855164.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence Length = 111824 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| || |||||||||||||||||||||||| |||| Sbjct: 1096 caagtgccaaagagttcaaaaccatctattatgaagcttaggcaagcaacaagcagaaac 1037 Query: 1182 ct 1183 || Sbjct: 1036 ct 1035 Score = 46.1 bits (23), Expect = 0.36 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1201 tgcttaaggagaacccactgcgcaacttccc 1231 |||||| ||||||||||| |||||||||||| Sbjct: 928 tgcttatggagaacccacagcgcaacttccc 898
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| || |||||||||||||||||||||||| |||| Sbjct: 22749740 caagtgccaaagagttcaaaaccatctattatgaagcttaggcaagcaacaagcagaaac 22749681 Query: 1182 ct 1183 || Sbjct: 22749680 ct 22749679 Score = 46.1 bits (23), Expect = 0.36 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1201 tgcttaaggagaacccactgcgcaacttccc 1231 |||||| ||||||||||| |||||||||||| Sbjct: 22749572 tgcttatggagaacccacagcgcaacttccc 22749542
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 1122 caagtgcccaagagtccaaaaccatctgttctgaagcttaggcaagcaacaagcaaaaac 1181 |||||||| |||||| ||||||||||| || |||||||||||||||||||||||| |||| Sbjct: 86936 caagtgccaaagagttcaaaaccatctattatgaagcttaggcaagcaacaagcagaaac 86877 Query: 1182 ct 1183 || Sbjct: 86876 ct 86875 Score = 46.1 bits (23), Expect = 0.36 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1201 tgcttaaggagaacccactgcgcaacttccc 1231 |||||| ||||||||||| |||||||||||| Sbjct: 86768 tgcttatggagaacccacagcgcaacttccc 86738
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 226 tcaaccaggccctcaaggcgcac 248 ||||||||||||||||||||||| Sbjct: 2471516 tcaaccaggccctcaaggcgcac 2471538
>gb|AC120840.32| Mus musculus chromosome 19, clone RP24-539E24, complete sequence Length = 201016 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 968 agatagaaacaaagaaaataaca 990 ||||||||||||||||||||||| Sbjct: 68060 agatagaaacaaagaaaataaca 68038
>gb|AC189292.1| Brassica rapa subsp. pekinensis clone KBrB026E08, complete sequence Length = 112398 Score = 46.1 bits (23), Expect = 0.36 Identities = 26/27 (96%) Strand = Plus / Minus Query: 651 aggaaagcaaagcctgtggagaagttg 677 ||||| ||||||||||||||||||||| Sbjct: 36281 aggaatgcaaagcctgtggagaagttg 36255
>emb|BX069364.1|CNS09POO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6AA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 525 gacgagcggtacaaggacgacc 546
>emb|BX062859.1|CNS09KNZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44BD08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 961 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 702 gacgagcggtacaaggacgacc 681
>emb|BX062858.1|CNS09KNY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44BD08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 914 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 483 gacgagcggtacaaggacgacc 504
>emb|BX061695.1|CNS09JRN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42CF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 939 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 705 gacgagcggtacaaggacgacc 684
>emb|BX061694.1|CNS09JRM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42CF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 515 gacgagcggtacaaggacgacc 536
>emb|BX061162.1|CNS09JCU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC41DC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 881 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 718 gacgagcggtacaaggacgacc 697
>emb|BX061161.1|CNS09JCT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41DC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 913 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 512 gacgagcggtacaaggacgacc 533
>emb|BX060807.1|CNS09J2Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC41BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 721 gacgagcggtacaaggacgacc 700
>emb|BX060806.1|CNS09J2Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 988 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 539 gacgagcggtacaaggacgacc 560
>emb|BX059960.1|CNS09IFG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC40AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 721 gacgagcggtacaaggacgacc 700
>emb|BX059959.1|CNS09IFF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 993 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 511 gacgagcggtacaaggacgacc 532
>emb|BX052429.1|CNS09CM9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 988 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 699 gacgagcggtacaaggacgacc 678
>emb|BX052428.1|CNS09CM8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1046 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 530 gacgagcggtacaaggacgacc 551
>emb|BX046573.1|CNS0983L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 918 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 714 gacgagcggtacaaggacgacc 693
>emb|BX046572.1|CNS0983K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC20BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 522 gacgagcggtacaaggacgacc 543
>emb|BX044336.1|CNS096DG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17DE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 595 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 517 gacgagcggtacaaggacgacc 538
>emb|BX042481.1|CNS094XX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC14CB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 867 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 723 gacgagcggtacaaggacgacc 702
>emb|BX042480.1|CNS094XW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14CB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 928 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 539 gacgagcggtacaaggacgacc 560
>emb|BX035499.1|CNS08ZJZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA6DE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 713 gacgagcggtacaaggacgacc 692
>emb|BX035498.1|CNS08ZJY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6DE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 524 gacgagcggtacaaggacgacc 545
>emb|BX034897.1|CNS08Z39 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA6AA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 724 gacgagcggtacaaggacgacc 703
>emb|BX034896.1|CNS08Z38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6AA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 548 gacgagcggtacaaggacgacc 569
>emb|BX032805.1|CNS08XH5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 925 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 515 gacgagcggtacaaggacgacc 536
>emb|BX027863.1|CNS08TNV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 929 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 715 gacgagcggtacaaggacgacc 694
>emb|BX027862.1|CNS08TNU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1004 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 491 gacgagcggtacaaggacgacc 512
>emb|BX027169.1|CNS08T4L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 983 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 725 gacgagcggtacaaggacgacc 704
>emb|BX027168.1|CNS08T4K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40CH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 500 gacgagcggtacaaggacgacc 521
>emb|BX026114.1|CNS08SBA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4BB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 607 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 440 gacgagcggtacaaggacgacc 461
>emb|BX025284.1|CNS08RO8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA38DA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 998 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 701 gacgagcggtacaaggacgacc 680
>emb|BX025216.1|CNS08RMC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA38CF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 865 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 717 gacgagcggtacaaggacgacc 696
>emb|BX025215.1|CNS08RMB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38CF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 805 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 538 gacgagcggtacaaggacgacc 559
>emb|BX024124.1|CNS08QS0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36DC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 583 gacgagcggtacaaggacgacc 604
>emb|BX022134.1|CNS08P8Q Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA32DF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 909 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 529 gacgagcggtacaaggacgacc 550
>emb|BX020569.1|CNS08O19 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30BC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 890 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 700 gacgagcggtacaaggacgacc 679
>emb|BX020568.1|CNS08O18 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30BC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 883 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 526 gacgagcggtacaaggacgacc 547
>emb|BX019296.1|CNS08N1W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29BG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 982 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 524 gacgagcggtacaaggacgacc 545
>emb|BX016262.1|CNS08KPM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24BF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 703 gacgagcggtacaaggacgacc 682
>emb|BX016261.1|CNS08KPL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24BF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 833 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 516 gacgagcggtacaaggacgacc 537
>emb|BX015970.1|CNS08KHI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23DH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 514 gacgagcggtacaaggacgacc 535
>emb|BX015722.1|CNS08KAM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA23CD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 915 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 707 gacgagcggtacaaggacgacc 686
>emb|BX015721.1|CNS08KAL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 445 gacgagcggtacaaggacgacc 466
>emb|BX013827.1|CNS08ITZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 963 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 508 gacgagcggtacaaggacgacc 529
>emb|BX012602.1|CNS08HVY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19DH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 577 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 503 gacgagcggtacaaggacgacc 524
>emb|BX012382.1|CNS08HPU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA19CF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 925 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 703 gacgagcggtacaaggacgacc 682
>emb|BX012381.1|CNS08HPT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19CF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 981 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 531 gacgagcggtacaaggacgacc 552
>emb|BX011876.1|CNS08HBS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18DG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 975 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 718 gacgagcggtacaaggacgacc 697
>emb|BX011875.1|CNS08HBR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18DG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1025 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 501 gacgagcggtacaaggacgacc 522
>ref|XM_321710.2| Anopheles gambiae str. PEST ENSANGP00000015800 (ENSANGG00000013311), mRNA Length = 1104 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 gacgagcggtacaaggacgacc 465 |||||||||||||||||||||| Sbjct: 582 gacgagcggtacaaggacgacc 603
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 cgccctcctcgccgaacgcag 289 ||||||||||||||||||||| Sbjct: 799036 cgccctcctcgccgaacgcag 799016
>emb|CR318596.19| Zebrafish DNA sequence from clone DKEY-104N16 in linkage group 7, complete sequence Length = 225081 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 968 agatagaaacaaagaaaataa 988 ||||||||||||||||||||| Sbjct: 82482 agatagaaacaaagaaaataa 82462
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gccggtggccgtgtgcggcga 166 ||||||||||||||||||||| Sbjct: 348575 gccggtggccgtgtgcggcga 348595
>gb|DQ156150.1| Salmo salar BAC S0188I22, partial sequence Length = 203947 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 872 gcaaatttcaatttacaaaga 892 ||||||||||||||||||||| Sbjct: 16467 gcaaatttcaatttacaaaga 16487
>gb|AC003954.1| Homo sapiens chromosome 5, Pac clone 162o17 (LBNL H147), complete sequence Length = 122735 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1400 tgaggattgaataaattttca 1420 ||||||||||||||||||||| Sbjct: 44781 tgaggattgaataaattttca 44801
>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence Length = 207960 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 970 atagaaacaaagaaaataaca 990 ||||||||||||||||||||| Sbjct: 78084 atagaaacaaagaaaataaca 78064
>gb|AC124336.10| Mus musculus chromosome 18, clone RP24-125A2, complete sequence Length = 193807 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 964 aagcagatagaaacaaagaaa 984 ||||||||||||||||||||| Sbjct: 141855 aagcagatagaaacaaagaaa 141835
>gb|AC102069.13| Mus musculus chromosome 18, clone RP23-304K8, complete sequence Length = 156706 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 964 aagcagatagaaacaaagaaa 984 ||||||||||||||||||||| Sbjct: 83420 aagcagatagaaacaaagaaa 83400
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cttcaaggagaacgtgcggccgctg 200 ||||||||||||||||| ||||||| Sbjct: 310832 cttcaaggagaacgtgctgccgctg 310808
>gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, complete sequence Length = 211309 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 964 aagcagatagaaacaaagaaa 984 ||||||||||||||||||||| Sbjct: 174463 aagcagatagaaacaaagaaa 174483
>gb|AC008881.6| Homo sapiens chromosome 5 clone CTD-2211B24, complete sequence Length = 56907 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1400 tgaggattgaataaattttca 1420 ||||||||||||||||||||| Sbjct: 4152 tgaggattgaataaattttca 4132
>gb|AC092724.2| Homo sapiens chromosome 16 clone RP11-571O6, complete sequence Length = 176521 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1184 taagaaggaaacagaattgcttaag 1208 |||||||||||||||| |||||||| Sbjct: 95460 taagaaggaaacagaaatgcttaag 95436
>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence Length = 181229 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 970 atagaaacaaagaaaataaca 990 ||||||||||||||||||||| Sbjct: 179199 atagaaacaaagaaaataaca 179179
>gb|AC084471.1|AC084471 Caenorhabditis briggsae cosmid CB048J20, complete sequence Length = 95539 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 972 agaaacaaagaaaataacatg 992 ||||||||||||||||||||| Sbjct: 45017 agaaacaaagaaaataacatg 45037
>gb|AC068630.21| Homo sapiens 3 BAC RP11-289N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164161 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 971 tagaaacaaagaaaataacat 991 ||||||||||||||||||||| Sbjct: 156819 tagaaacaaagaaaataacat 156839
>emb|AL954869.9| Mouse DNA sequence from clone RP23-477I13 on chromosome X, complete sequence Length = 159365 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 974 aaacaaagaaaataacatgat 994 ||||||||||||||||||||| Sbjct: 95561 aaacaaagaaaataacatgat 95581
>emb|AL672095.6| Mouse DNA sequence from clone RP23-387N22 on chromosome X, complete sequence Length = 165970 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 970 atagaaacaaagaaaataaca 990 ||||||||||||||||||||| Sbjct: 98229 atagaaacaaagaaaataaca 98209
>emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on chromosome 3, complete sequence Length = 207366 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 968 agatagaaacaaagaaaataa 988 ||||||||||||||||||||| Sbjct: 34816 agatagaaacaaagaaaataa 34836
>gb|M69036.1|AFAPHBHI Alcaligenes eutrophus protein H (phbH) and protein I (phbI) genes, complete cds Length = 4501 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gccggtggccgtgtgcggcga 166 ||||||||||||||||||||| Sbjct: 2906 gccggtggccgtgtgcggcga 2926
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1034 agcagcacggccagcagttccgcca 1058 |||||||||||||||||| |||||| Sbjct: 4050568 agcagcacggccagcagtgccgcca 4050592 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 234,708,580 Number of extensions: 12559612 Number of successful extensions: 240110 Number of sequences better than 10.0: 82 Number of HSP's gapped: 240106 Number of HSP's successfully gapped: 118 Length of query: 1457 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1434 Effective length of database: 18,503,978,556 Effective search space: 26534705249304 Effective search space used: 26534705249304 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)