ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf125m19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0637500:Os07g0637500 33 0.20
2AK110203: 29 3.8
3AK121331:Os01g0816400 28 8.4
4Os05g0406900:Os05g0406900 28 8.5
5AK100055:Os06g0690700 28 8.5

>Os07g0637500:Os07g0637500 |
          Length = 480
 Score = 33.5 bits (75), Expect = 0.20
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 400 CLQSLLKEQIHGNKHVPG*FLELARNTYGQSYRKG 296
           CL S   E +HGN   PG  ++L   T+G+++R G
Sbjct: 185 CLYSSFNEDVHGNS-TPGSIVKLGEGTFGEAFRAG 218



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>AK110203: |
          Length = 1316

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 10/52 (19%)
 Frame = -2

Query: 327 EIHTVNHTERVMHKVQLTLHINSENSKKRAKF----------CWRRAAKSCH 202
           + HT+N TER++  ++   H+ SE +  R  F           WR A+   H
Sbjct: 740 QFHTINFTERLLTLLRDVEHVQSERTAARVWFPHWPRIFPADVWRNASGDAH 791



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>AK121331:Os01g0816400 |
          Length = 1997

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 134 LHKFLEPHFHEHIYAYGLPLK*TIDQEHKQERSEGTKSSPAR 9
           LHKF+ P     +      L  T+D E+++   EGT S+P R
Sbjct: 785 LHKFVGPDIKGFLSDVKPALLSTLDAEYEKNPFEGTASAPKR 826



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>Os05g0406900:Os05g0406900 |
          Length = 216

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 241 GKILLASSSKIMPWILEASMKP*ISTPLPKNLITPSFTNFWSLIS 107
           GK  LA  + ++ ++L  +     +TP P N  TPS   +WS I+
Sbjct: 38  GKFKLAQKAIVVNFLLSLT-----ATPPPPNATTPSAEKWWSTIA 77



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>AK100055:Os06g0690700 |
          Length = 822

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 777 TTSDMMCTTSEYIHGQAPKSNQLSDHTSNSP 685
           TT  +MC   E IHG +  +N  SD    +P
Sbjct: 456 TTGKLMCKAIEPIHGHSDVTNDFSDQACCTP 486


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,533,197
Number of extensions: 580003
Number of successful extensions: 1381
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1380
Number of HSP's successfully gapped: 5
Length of query: 293
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 193
Effective length of database: 11,395,755
Effective search space: 2199380715
Effective search space used: 2199380715
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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