ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf128e15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9W596:FUTSC_DROME Microtubule-associated protein futsch - Droso... 33 2.4
2Q03132:ERYA2_SACER Erythronolide synthase, modules 3 and 4 - Sac... 33 4.1
3Q7S9L2:STU1_NEUCR Protein stu-1 - Neurospora crassa 32 9.1
4Q95235:LYAM1_PONPY L-selectin precursor - Pongo pygmaeus (Orangu... 32 9.1
5Q95237:LYAM1_PANTR L-selectin precursor - Pan troglodytes (Chimp... 32 9.1
6P14151:LYAM1_HUMAN L-selectin precursor - Homo sapiens (Human) 32 9.1
7A1R883:Y2732_ARTAT UPF0182 protein AAur_2732 - Arthrobacter aure... 32 9.2
8P11282:VP75_SHV21 Probable membrane antigen 75 - Saimiriine herp... 32 9.2
9Q93249:CAB1_CAEEL Protein cab-1 - Caenorhabditis elegans 32 9.2

>Q9W596:FUTSC_DROME Microtubule-associated protein futsch - Drosophila melanogaster|
            (Fruit fly)
          Length = 5412
 Score = 33.5 bits (75), Expect = 2.4
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
 Frame = -1

Query: 459  EEYNTNAYKCKNKPCADELLRGPNRDRHVNKKKHRPPKPHQVTAWXXXXXXXRQQLEPEH 280
            E    ++ K    P  + +L GP  D   +K+  RPP      +        +    P  
Sbjct: 2838 ESTKADSTKGDISPSPESVLEGPKDDVEKSKESSRPPS----VSASITGDSTKDVSRPAS 2893

Query: 279  EQVGAVARHGQPDSHEDEVEQLEDAFEEA-------PARHGQMDRLSGLAQRFRRRRAST 121
                    H + +S  + + ++E   +EA        ++  Q D  S LA +   RR S 
Sbjct: 2894 VVESVKDEHDKAESRRESIAKVESVIDEAGKSDSKSSSQDSQKDEKSTLASKEASRRESV 2953

Query: 120  PDSSGAPLTDPAADQPAFLDGSGIGELVREGESKLPAED 4
             +SS     + +  +P  +  SG   + RE +S L ++D
Sbjct: 2954 VESSKDD-AEKSESRPESVIASG-EPVPRESKSPLDSKD 2990



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>Q03132:ERYA2_SACER Erythronolide synthase, modules 3 and 4 - Saccharopolyspora erythraea|
            (Streptomyces erythraeus)
          Length = 3567

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -1

Query: 231  DEVEQLEDAFEEAPARHGQMD---RLSGLAQRFRRRRASTPDSSGAPLTDPAADQPAF 67
            D +++LE A E   A  G  D   RL  L +R+  RRA  P +S   +++ A+D   F
Sbjct: 3499 DRLDELEKALEALSAEDGHDDVGQRLESLLRRWNSRRADAPSTSA--ISEDASDDELF 3554



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>Q7S9L2:STU1_NEUCR Protein stu-1 - Neurospora crassa|
          Length = 1136

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +2

Query: 38  TSSPIPDPSRKAGWSAAGSVKGAPLLSGVDARRRLNLCARP 160
           T+S +P P++ A  +++G + GAP+  G   +RR  + ARP
Sbjct: 608 TASAVPAPTKSAFGASSGGLSGAPMRPG---KRRPEVAARP 645



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>Q95235:LYAM1_PONPY L-selectin precursor - Pongo pygmaeus (Orangutan)|
          Length = 372

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 950  YLPQNKETDAQSSDACNPLKLGRCNSVLVSEFTASCATWT 1069
            Y+ +NK+    + DAC+ LK   C       +TASC  W+
Sbjct: 132  YIKRNKDAGKWNDDACHKLKAALC-------YTASCQPWS 164



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>Q95237:LYAM1_PANTR L-selectin precursor - Pan troglodytes (Chimpanzee)|
          Length = 372

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 950  YLPQNKETDAQSSDACNPLKLGRCNSVLVSEFTASCATWT 1069
            Y+ +NK+    + DAC+ LK   C       +TASC  W+
Sbjct: 132  YIKRNKDAGKWNDDACHKLKAALC-------YTASCQPWS 164



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>P14151:LYAM1_HUMAN L-selectin precursor - Homo sapiens (Human)|
          Length = 372

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 950  YLPQNKETDAQSSDACNPLKLGRCNSVLVSEFTASCATWT 1069
            Y+ +NK+    + DAC+ LK   C       +TASC  W+
Sbjct: 132  YIKRNKDAGKWNDDACHKLKAALC-------YTASCQPWS 164



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>A1R883:Y2732_ARTAT UPF0182 protein AAur_2732 - Arthrobacter aurescens (strain TC1)|
          Length = 998

 Score = 31.6 bits (70), Expect = 9.2
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 544 ILVELAAGCFIFFDHGWKDVIPVDKTGNFDTIYSFLKENWRTAKWVALG-AVVFEALLFT 720
           I+V +A   FIFF + W DV+   + G F+    +++EN        +G A++F A+ F 
Sbjct: 25  IVVAVAVVGFIFFANVWTDVLWYQQLGFFEV---YIRENLARIITFLIGFAMMFAAVFFA 81

Query: 721 VALIVQS 741
           + +  +S
Sbjct: 82  IRIAYRS 88



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>P11282:VP75_SHV21 Probable membrane antigen 75 - Saimiriine herpesvirus 2 (strain 11)|
           (SaHV-2) (Herpesvirus saimiri)
          Length = 1299

 Score = 31.6 bits (70), Expect = 9.2
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 844 PNLDYRPIRNDAWSQRMRDKYGVDSFDPNRFQQATISPAEQRNRCTIL 987
           P +DY P+  D+    +  +  + S+ PN  Q+ T S  E +  C  L
Sbjct: 100 PQIDYNPLTLDSLDHNLGQRAVIFSYGPNLHQRLTTSALELQRACKTL 147



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>Q93249:CAB1_CAEEL Protein cab-1 - Caenorhabditis elegans|
          Length = 425

 Score = 31.6 bits (70), Expect = 9.2
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -1

Query: 582 EENEASCSKLY*YEQNDEE*ISG*AASTPG*RSSTTEDGGNEEYNTNAYKCKN-KPCADE 406
           +E  A  ++L+ Y+Q  ++ I G     PG   S  EDG +EE N + Y+C    P  D 
Sbjct: 357 DETLAYKAQLHQYQQAKQKIICG--EDAPGIIESDGEDGADEENNYSVYECPGLAPTGDI 414

Query: 405 LLRGPN 388
            +  PN
Sbjct: 415 EVCNPN 420


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 286,420,660
Number of extensions: 6755647
Number of successful extensions: 19362
Number of sequences better than 10.0: 9
Number of HSP's gapped: 19343
Number of HSP's successfully gapped: 9
Length of query: 501
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 384
Effective length of database: 68,593,924
Effective search space: 26340066816
Effective search space used: 26340066816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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