ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf125l11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057108.1| Oryza sativa (japonica cultivar-group) Os03g0586900 (Os03g0586900) mRNA, complete cds Length = 2448 Score = 2056 bits (1037), Expect = 0.0 Identities = 1678/1894 (88%) Strand = Plus / Plus Query: 85 gatgatgtcgctccaggagttcgtctcctccatggcgcccctcatcgacctggagaaggc 144 |||| ||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 93 gatggtgtcgctgcaggagttcgtctcgtccatggcgcctctcatagacctggagaaggc 152 Query: 145 ggcggagatatcggcggagtcggaggccagctccaagaggaaggagaggcgagggtccgt 204 ||||||||||||||||||||||| | | ||||| |||| |||||| | || | ||| Sbjct: 153 ggcggagatatcggcggagtcggcgacgagctcgaagaccctcgagaggaggggttgcgt 212 Query: 205 catgcccaacctcaagtgcaccgacgcccagaccgggctgatggggaagacgctcctcga 264 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 213 catggccaacctcaagtgcaccgacgcccagacggggctgatggggaagacgctcctgga 272 Query: 265 gttccagcccaacaagggcgacgtgcttccgcctcacaagttcgggacgcacgacgtggt 324 |||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 273 gttccaacccaacaagggcgacgtgcttccacctcacaagtttggaacacacgatgtggt 332 Query: 325 tgccctcaagccaaataaagcagatgctggatcccctgctcttgggcaaggtgtagttta 384 ||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 333 tgctctgaagccaaataaggcagatgctggatctgctgctcttgggcaaggtgtagttta 392 Query: 385 tcgcttgaaggattcttccattaccgttgtttttgatgatattcctgaagatggattaaa 444 |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 393 tcgcttgaaggattcttccattactgttgcctttgatgacattcctgaagatggattaaa 452 Query: 445 tagccctctccgtcttgagaagcttgcgaatgaggttacttaccgcaggatgaaagatgc 504 |||||||||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| Sbjct: 453 tagccctctccgccttgaaaagcttgcaaatgaggtgacataccgcaggatgaaggatgc 512 Query: 505 actaattcaacttagcaagggcatccaagcaggaccttctgcaaaccttgttcctgtgtt 564 |||| |||||||||| |||||||| ||| |||| ||||| ||||||||| ||||||| || Sbjct: 513 actagttcaacttagtaagggcattcaaacaggcccttcagcaaaccttattcctgtttt 572 Query: 565 atttggagagaactcgcctatgcgttccaaggacgccgtgaagttcagtccgtttaacaa 624 |||||||| ||| | |||||| |||||||||| | | |||||||||||| |||||||| Sbjct: 573 gtttggagaaaacccacctatgagttccaaggatgttgcgaagttcagtccatttaacaa 632 Query: 625 gaatttggacgactcacagaaagatgctatctcgaaggcgctcagatccagggatgnnnn 684 ||||||||| || |||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 633 gaatttggatgagtcacagaaagatgctatctcgaaggccctcaggtcaagggatgtttt 692 Query: 685 nnngcttcatggacctcctggaactggaaagacaacaaccaacattgagataatattgca 744 |||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||| Sbjct: 693 cttgcttcatggacctcctggcactgggaagacaacaactatcattgagataatattgca 752 Query: 745 ggaggtcaagcgtggagcaaaaattcttgcttgtgctgcttccaatattgctgtggataa 804 |||||| || |||||| |||| |||||||||||||||||||| || || || |||||||| Sbjct: 753 ggaggtgaaacgtggatcaaagattcttgcttgtgctgcttctaacatcgccgtggataa 812 Query: 805 cattgttgagcgactctcgcagtacagaacaaaattggtgaggttagggcatcctgcccg 864 |||||||||||||||||| | || ||||| ||||||||||||||||| |||||||| || Sbjct: 813 cattgttgagcgactctcccgatatagaaccaaattggtgaggttaggccatcctgctcg 872 Query: 865 tttactaccgcaagtgttggacagtgctcttgatgcacaggtactccgagcagataatag 924 |||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||| || Sbjct: 873 attactaccccaagtgttggacagtgctcttgacgcacaggtattgcgagcagataacag 932 Query: 925 cagcttggctggagacattcgcaaggaaatgaaggtgcttaatagcaaattgctgaaagc 984 |||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 933 cagcttagcaggagatattcgcaaagaaatgaaggtgcttaatagcaaattgctgaaagc 992 Query: 985 taaagatagaaacacaaaaagagatatcaggaaagagcttaaaacccttgccaaagagga 1044 ||| |||| || |||||||| || |||||||||||||| | ||||||||||||||| || Sbjct: 993 taaggataagaatacaaaaagggacatcaggaaagagctcagaacccttgccaaagaaga 1052 Query: 1045 gcgaaaacggcagcagcttgcagtcgctgatgtcataaaaaatgcagatgttgtgctgtc 1104 | ||||||| || |||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 1053 gagaaaacgacaacagcttgctgttgctgatgtgataaaaaatgcagatgttgtactgtc 1112 Query: 1105 gactttgacaggtgcatcttccaaaaagatagctggcatttcatttgatttggtaattat 1164 ||||||||| |||||||||||||||||| ||| ||| ||| ||||||||||||| ||||| Sbjct: 1113 gactttgactggtgcatcttccaaaaagctagatggtattacatttgatttggtcattat 1172 Query: 1165 tgatgaggctgctcaggcactcgaggtggcatgttggatagccttactgaagggggcaag 1224 |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| |||| Sbjct: 1173 tgatgaagctgctcaggcacttgagatggcatgttggatagccttattgaagggtccaag 1232 Query: 1225 gtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgaggctga 1284 ||||| |||||||||||||||||||| |||||||| || |||||||||| ||||||||| Sbjct: 1233 atgtgtgcttgctggagaccatcttcaacttcctccgactatccaaagtgctgaggctga 1292 Query: 1285 gaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatgaaat 1344 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| Sbjct: 1293 gaagaaggggatgggaaagacactctttgaacgccttactgaagcttatggagatcaaat 1352 Query: 1345 cacatccatgctcactgtccagtataggatgcacgagctaatcatgaactggtcatcaaa 1404 ||||||||||||||| ||||||| || ||||| ||||| || ||||| |||||||| || Sbjct: 1353 tacatccatgctcactatccagtacagaatgcatgagctcataatgaattggtcatctaa 1412 Query: 1405 agaactttacagtaacaagatcaaagcgcattctagtgttgctgggcatatgctctatga 1464 ||||||||| | ||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 1413 agaactttataataacaagatcaaagctcattctagtgttgctgatcatatgctctatga 1472 Query: 1465 tcttgaaggagtgaataaatcttcttcaacagagccaactattatactcgttgacactac 1524 |||||| |||||| | ||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1473 cattgaagaagtgaaaagatcttcttccacagagccgactatcatactaattgacactac 1532 Query: 1525 agggtgtgacatggaagaggtgaaagatgaagaggagagcaccatgaatgagggcgaggc 1584 ||||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1533 tgggtgtgacatggaagaagtaaaagatgaggaggagagcactatgaatgagggtgaggc 1592 Query: 1585 tgcagtatccattgctcatgccaagttgcttgttgagagtggtgtccgtgcatctgatat 1644 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1593 tgcagtatccattgctcatgccaagctgcttgttgagagtggtgtccgtgcatctgatat 1652 Query: 1645 tggcattattacgccatattctgcccaggtaacctgcctgaaaatgatgagaaataaaga 1704 ||| || ||||| || ||| |||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 1653 tggaataattacaccttatgctgcacaggtaacctgtctgaagatgatgagaaacaaaga 1712 Query: 1705 tgctaaattgaaggacttggagatatcaacggttgatgggtttcagggtagggagaaaga 1764 | ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1713 tactaaactgaaggacttggagatatcgacagttgatgggttccagggtagggagaaaga 1772 Query: 1765 ggccataatcatttcgatggtcagatccaaccaaaagaaagaggttgggttcttgagcga 1824 ||||| |||||||| ||||||||||||||| |||||||||||| || ||||| || || Sbjct: 1773 agccatcatcatttcaatggtcagatccaactcaaagaaagaggtcggattcttaagtga 1832 Query: 1825 ccataggcggatgaacgtcgccgtaacacgagcaaggcggcagtgctgcgtagtgtgcga 1884 ||||| || ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 1833 tcatagacgaatgaatgttgctgtaacacgagccagaaggcagtgctgcctagtgtgcga 1892 Query: 1885 tgccgagaccgtaagcagcgacaggttcctgaaacgcctggttgagtacttcgaggagaa 1944 || ||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||| Sbjct: 1893 tgtagagaccgtaagcaacgacaaattcttgaaacgcttggttgagtactttgaggagaa 1952 Query: 1945 cggcgagtacctgagtgcgtctgagtaccagagc 1978 ||| |||||| ||||||| || || ||||||||| Sbjct: 1953 cggggagtacttgagtgcatcagaataccagagc 1986
>dbj|AK099721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F16, full insert sequence Length = 2451 Score = 2056 bits (1037), Expect = 0.0 Identities = 1678/1894 (88%) Strand = Plus / Plus Query: 85 gatgatgtcgctccaggagttcgtctcctccatggcgcccctcatcgacctggagaaggc 144 |||| ||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 96 gatggtgtcgctgcaggagttcgtctcgtccatggcgcctctcatagacctggagaaggc 155 Query: 145 ggcggagatatcggcggagtcggaggccagctccaagaggaaggagaggcgagggtccgt 204 ||||||||||||||||||||||| | | ||||| |||| |||||| | || | ||| Sbjct: 156 ggcggagatatcggcggagtcggcgacgagctcgaagaccctcgagaggaggggttgcgt 215 Query: 205 catgcccaacctcaagtgcaccgacgcccagaccgggctgatggggaagacgctcctcga 264 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 216 catggccaacctcaagtgcaccgacgcccagacggggctgatggggaagacgctcctgga 275 Query: 265 gttccagcccaacaagggcgacgtgcttccgcctcacaagttcgggacgcacgacgtggt 324 |||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 276 gttccaacccaacaagggcgacgtgcttccacctcacaagtttggaacacacgatgtggt 335 Query: 325 tgccctcaagccaaataaagcagatgctggatcccctgctcttgggcaaggtgtagttta 384 ||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 336 tgctctgaagccaaataaggcagatgctggatctgctgctcttgggcaaggtgtagttta 395 Query: 385 tcgcttgaaggattcttccattaccgttgtttttgatgatattcctgaagatggattaaa 444 |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 396 tcgcttgaaggattcttccattactgttgcctttgatgacattcctgaagatggattaaa 455 Query: 445 tagccctctccgtcttgagaagcttgcgaatgaggttacttaccgcaggatgaaagatgc 504 |||||||||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| Sbjct: 456 tagccctctccgccttgaaaagcttgcaaatgaggtgacataccgcaggatgaaggatgc 515 Query: 505 actaattcaacttagcaagggcatccaagcaggaccttctgcaaaccttgttcctgtgtt 564 |||| |||||||||| |||||||| ||| |||| ||||| ||||||||| ||||||| || Sbjct: 516 actagttcaacttagtaagggcattcaaacaggcccttcagcaaaccttattcctgtttt 575 Query: 565 atttggagagaactcgcctatgcgttccaaggacgccgtgaagttcagtccgtttaacaa 624 |||||||| ||| | |||||| |||||||||| | | |||||||||||| |||||||| Sbjct: 576 gtttggagaaaacccacctatgagttccaaggatgttgcgaagttcagtccatttaacaa 635 Query: 625 gaatttggacgactcacagaaagatgctatctcgaaggcgctcagatccagggatgnnnn 684 ||||||||| || |||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 636 gaatttggatgagtcacagaaagatgctatctcgaaggccctcaggtcaagggatgtttt 695 Query: 685 nnngcttcatggacctcctggaactggaaagacaacaaccaacattgagataatattgca 744 |||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||| Sbjct: 696 cttgcttcatggacctcctggcactgggaagacaacaactatcattgagataatattgca 755 Query: 745 ggaggtcaagcgtggagcaaaaattcttgcttgtgctgcttccaatattgctgtggataa 804 |||||| || |||||| |||| |||||||||||||||||||| || || || |||||||| Sbjct: 756 ggaggtgaaacgtggatcaaagattcttgcttgtgctgcttctaacatcgccgtggataa 815 Query: 805 cattgttgagcgactctcgcagtacagaacaaaattggtgaggttagggcatcctgcccg 864 |||||||||||||||||| | || ||||| ||||||||||||||||| |||||||| || Sbjct: 816 cattgttgagcgactctcccgatatagaaccaaattggtgaggttaggccatcctgctcg 875 Query: 865 tttactaccgcaagtgttggacagtgctcttgatgcacaggtactccgagcagataatag 924 |||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||| || Sbjct: 876 attactaccccaagtgttggacagtgctcttgacgcacaggtattgcgagcagataacag 935 Query: 925 cagcttggctggagacattcgcaaggaaatgaaggtgcttaatagcaaattgctgaaagc 984 |||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 936 cagcttagcaggagatattcgcaaagaaatgaaggtgcttaatagcaaattgctgaaagc 995 Query: 985 taaagatagaaacacaaaaagagatatcaggaaagagcttaaaacccttgccaaagagga 1044 ||| |||| || |||||||| || |||||||||||||| | ||||||||||||||| || Sbjct: 996 taaggataagaatacaaaaagggacatcaggaaagagctcagaacccttgccaaagaaga 1055 Query: 1045 gcgaaaacggcagcagcttgcagtcgctgatgtcataaaaaatgcagatgttgtgctgtc 1104 | ||||||| || |||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 1056 gagaaaacgacaacagcttgctgttgctgatgtgataaaaaatgcagatgttgtactgtc 1115 Query: 1105 gactttgacaggtgcatcttccaaaaagatagctggcatttcatttgatttggtaattat 1164 ||||||||| |||||||||||||||||| ||| ||| ||| ||||||||||||| ||||| Sbjct: 1116 gactttgactggtgcatcttccaaaaagctagatggtattacatttgatttggtcattat 1175 Query: 1165 tgatgaggctgctcaggcactcgaggtggcatgttggatagccttactgaagggggcaag 1224 |||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| |||| Sbjct: 1176 tgatgaagctgctcaggcacttgagatggcatgttggatagccttattgaagggtccaag 1235 Query: 1225 gtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgaggctga 1284 ||||| |||||||||||||||||||| |||||||| || |||||||||| ||||||||| Sbjct: 1236 atgtgtgcttgctggagaccatcttcaacttcctccgactatccaaagtgctgaggctga 1295 Query: 1285 gaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatgaaat 1344 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| Sbjct: 1296 gaagaaggggatgggaaagacactctttgaacgccttactgaagcttatggagatcaaat 1355 Query: 1345 cacatccatgctcactgtccagtataggatgcacgagctaatcatgaactggtcatcaaa 1404 ||||||||||||||| ||||||| || ||||| ||||| || ||||| |||||||| || Sbjct: 1356 tacatccatgctcactatccagtacagaatgcatgagctcataatgaattggtcatctaa 1415 Query: 1405 agaactttacagtaacaagatcaaagcgcattctagtgttgctgggcatatgctctatga 1464 ||||||||| | ||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 1416 agaactttataataacaagatcaaagctcattctagtgttgctgatcatatgctctatga 1475 Query: 1465 tcttgaaggagtgaataaatcttcttcaacagagccaactattatactcgttgacactac 1524 |||||| |||||| | ||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1476 cattgaagaagtgaaaagatcttcttccacagagccgactatcatactaattgacactac 1535 Query: 1525 agggtgtgacatggaagaggtgaaagatgaagaggagagcaccatgaatgagggcgaggc 1584 ||||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1536 tgggtgtgacatggaagaagtaaaagatgaggaggagagcactatgaatgagggtgaggc 1595 Query: 1585 tgcagtatccattgctcatgccaagttgcttgttgagagtggtgtccgtgcatctgatat 1644 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1596 tgcagtatccattgctcatgccaagctgcttgttgagagtggtgtccgtgcatctgatat 1655 Query: 1645 tggcattattacgccatattctgcccaggtaacctgcctgaaaatgatgagaaataaaga 1704 ||| || ||||| || ||| |||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 1656 tggaataattacaccttatgctgcacaggtaacctgtctgaagatgatgagaaacaaaga 1715 Query: 1705 tgctaaattgaaggacttggagatatcaacggttgatgggtttcagggtagggagaaaga 1764 | ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1716 tactaaactgaaggacttggagatatcgacagttgatgggttccagggtagggagaaaga 1775 Query: 1765 ggccataatcatttcgatggtcagatccaaccaaaagaaagaggttgggttcttgagcga 1824 ||||| |||||||| ||||||||||||||| |||||||||||| || ||||| || || Sbjct: 1776 agccatcatcatttcaatggtcagatccaactcaaagaaagaggtcggattcttaagtga 1835 Query: 1825 ccataggcggatgaacgtcgccgtaacacgagcaaggcggcagtgctgcgtagtgtgcga 1884 ||||| || ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 1836 tcatagacgaatgaatgttgctgtaacacgagccagaaggcagtgctgcctagtgtgcga 1895 Query: 1885 tgccgagaccgtaagcagcgacaggttcctgaaacgcctggttgagtacttcgaggagaa 1944 || ||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||| Sbjct: 1896 tgtagagaccgtaagcaacgacaaattcttgaaacgcttggttgagtactttgaggagaa 1955 Query: 1945 cggcgagtacctgagtgcgtctgagtaccagagc 1978 ||| |||||| ||||||| || || ||||||||| Sbjct: 1956 cggggagtacttgagtgcatcagaataccagagc 1989
>gb|AY111687.1| Zea mays CL57554_1 mRNA sequence Length = 695 Score = 375 bits (189), Expect = e-100 Identities = 363/421 (86%) Strand = Plus / Minus Query: 1565 accatgaatgagggcgaggctgcagtatccattgctcatgccaagttgcttgttgagagt 1624 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 583 accatgaatgagggcgaggcagcagtatccattgcccatgccaagttgcttgttgagagt 524 Query: 1625 ggtgtccgtgcatctgatattggcattattacgccatattctgcccaggtaacctgcctg 1684 ||||| ||| ||||| ||||| || |||||||| || |||| |||||||||||| || Sbjct: 523 ggtgttaatgcttctgacattggaataattacgccttacgctgcacaggtaacctgcttg 464 Query: 1685 aaaatgatgagaaataaagatgctaaattgaaggacttggagatatcaacggttgatggg 1744 || ||||||||||| |||||||| || ||||| || || |||||||| || ||||||||| Sbjct: 463 aagatgatgagaaacaaagatgccaagttgaaagatttagagatatcgacagttgatggg 404 Query: 1745 tttcagggtagggagaaagaggccataatcatttcgatggtcagatccaaccaaaagaaa 1804 ||||| || |||||||||| ||||| |||||||| |||||| | || ||| ||||||| Sbjct: 403 tttcaaggccgggagaaagaagccatcatcatttctatggtccggtctaactcaaagaaa 344 Query: 1805 gaggttgggttcttgagcgaccataggcggatgaacgtcgccgtaacacgagcaaggcgg 1864 ||||| |||||||||||||| || |||||||||||||| || || || ||||| ||| || Sbjct: 343 gaggtggggttcttgagcgatcacaggcggatgaacgtggcggtgacgcgagccaggagg 284 Query: 1865 cagtgctgcgtagtgtgcgatgccgagaccgtaagcagcgacaggttcctgaaacgcctg 1924 ||||||||| | |||||||| | |||||||| ||||||||||||||||||||||| || Sbjct: 283 cagtgctgcctggtgtgcgacgtggagaccgtgagcagcgacaggttcctgaaacgtttg 224 Query: 1925 gttgagtacttcgaggagaacggcgagtacctgagtgcgtctgagtaccagagcagctga 1984 || || ||||||||||||||||| |||||| ||||||| || || ||||||||||||||| Sbjct: 223 gtcgaatacttcgaggagaacggggagtacttgagtgcttcagaataccagagcagctga 164 Query: 1985 c 1985 | Sbjct: 163 c 163 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 1453 tatgctctatgatcttgaaggagtgaataaatcttcttcaacagagccaactattatact 1512 ||||||||||||||| |||| ||| | || ||||||||||||||| ||||||||| |||| Sbjct: 695 tatgctctatgatctagaagaagtcactagatcttcttcaacagaaccaactattgtact 636 Query: 1513 cgttgacactacagggtgtga 1533 | ||||||||||||||||||| Sbjct: 635 cattgacactacagggtgtga 615
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 311 bits (157), Expect = 6e-81 Identities = 235/261 (90%) Strand = Plus / Plus Query: 957 aggtgcttaatagcaaattgctgaaagctaaagatagaaacacaaaaagagatatcagga 1016 ||||||||||||||||||||||||||||||| |||| || |||||||| || ||||||| Sbjct: 177899 aggtgcttaatagcaaattgctgaaagctaaggataagaatacaaaaagggacatcagga 177958 Query: 1017 aagagcttaaaacccttgccaaagaggagcgaaaacggcagcagcttgcagtcgctgatg 1076 ||||||| | ||||||||||||||| ||| ||||||| || |||||||| || ||||||| Sbjct: 177959 aagagctcagaacccttgccaaagaagagagaaaacgacaacagcttgctgttgctgatg 178018 Query: 1077 tcataaaaaatgcagatgttgtgctgtcgactttgacaggtgcatcttccaaaaagatag 1136 | |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| Sbjct: 178019 tgataaaaaatgcagatgttgtactgtcgactttgactggtgcatcttccaaaaagctag 178078 Query: 1137 ctggcatttcatttgatttggtaattattgatgaggctgctcaggcactcgaggtggcat 1196 ||| ||| ||||||||||||| ||||||||||| |||||||||||||| ||| |||||| Sbjct: 178079 atggtattacatttgatttggtcattattgatgaagctgctcaggcacttgagatggcat 178138 Query: 1197 gttggatagccttactgaagg 1217 |||||||||||||| |||||| Sbjct: 178139 gttggatagccttattgaagg 178159 Score = 236 bits (119), Expect = 3e-58 Identities = 182/203 (89%) Strand = Plus / Plus Query: 1221 caaggtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgagg 1280 |||| ||||| |||||||||||||||||||| |||||||| || |||||||||| ||||| Sbjct: 178777 caagatgtgtgcttgctggagaccatcttcaacttcctccgactatccaaagtgctgagg 178836 Query: 1281 ctgagaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatg 1340 ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 178837 ctgagaagaaggggatgggaaagacactctttgaacgccttactgaagcttatggagatc 178896 Query: 1341 aaatcacatccatgctcactgtccagtataggatgcacgagctaatcatgaactggtcat 1400 |||| ||||||||||||||| ||||||| || ||||| ||||| || ||||| ||||||| Sbjct: 178897 aaattacatccatgctcactatccagtacagaatgcatgagctcataatgaattggtcat 178956 Query: 1401 caaaagaactttacagtaacaag 1423 | ||||||||||| | ||||||| Sbjct: 178957 ctaaagaactttataataacaag 178979 Score = 200 bits (101), Expect = 2e-47 Identities = 160/182 (87%) Strand = Plus / Plus Query: 641 cagaaagatgctatctcgaaggcgctcagatccagggatgnnnnnnngcttcatggacct 700 ||||||||||||||||||||||| ||||| || ||||||| ||||||||||||| Sbjct: 176874 cagaaagatgctatctcgaaggccctcaggtcaagggatgttttcttgcttcatggacct 176933 Query: 701 cctggaactggaaagacaacaaccaacattgagataatattgcaggaggtcaagcgtgga 760 ||||| ||||| ||||||||||| | |||||||||||||||||||||||| || |||||| Sbjct: 176934 cctggcactgggaagacaacaactatcattgagataatattgcaggaggtgaaacgtgga 176993 Query: 761 gcaaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgactc 820 |||| |||||||||||||||||||| || || || |||||||||||||||||||||||| Sbjct: 176994 tcaaagattcttgcttgtgctgcttctaacatcgccgtggataacattgttgagcgactc 177053 Query: 821 tc 822 || Sbjct: 177054 tc 177055 Score = 198 bits (100), Expect = 6e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 1527 ggtgtgacatggaagaggtgaaagatgaagaggagagcaccatgaatgagggcgaggctg 1586 |||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 179690 ggtgtgacatggaagaagtaaaagatgaggaggagagcactatgaatgagggtgaggctg 179749 Query: 1587 cagtatccattgctcatgccaagttgcttgttgagagtggtgtccgtgcatctgatattg 1646 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 179750 cagtatccattgctcatgccaagctgcttgttgagagtggtgtccgtgcatctgatattg 179809 Query: 1647 gcattattacgccatattctgcccaggt 1674 | || ||||| || ||| |||| ||||| Sbjct: 179810 gaataattacaccttatgctgcacaggt 179837 Score = 172 bits (87), Expect = 4e-39 Identities = 126/139 (90%) Strand = Plus / Plus Query: 1671 aggtaacctgcctgaaaatgatgagaaataaagatgctaaattgaaggacttggagatat 1730 |||||||||| ||||| ||||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 179988 aggtaacctgtctgaagatgatgagaaacaaagatactaaactgaaggacttggagatat 180047 Query: 1731 caacggttgatgggtttcagggtagggagaaagaggccataatcatttcgatggtcagat 1790 | || ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 180048 cgacagttgatgggttccagggtagggagaaagaagccatcatcatttcaatggtcagat 180107 Query: 1791 ccaaccaaaagaaagaggt 1809 ||||| |||||||||||| Sbjct: 180108 ccaactcaaagaaagaggt 180126 Score = 149 bits (75), Expect = 5e-32 Identities = 138/159 (86%) Strand = Plus / Plus Query: 485 taccgcaggatgaaagatgcactaattcaacttagcaagggcatccaagcaggaccttct 544 |||||||||||||| ||||||||| |||||||||| |||||||| ||| |||| ||||| Sbjct: 175976 taccgcaggatgaaggatgcactagttcaacttagtaagggcattcaaacaggcccttca 176035 Query: 545 gcaaaccttgttcctgtgttatttggagagaactcgcctatgcgttccaaggacgccgtg 604 ||||||||| ||||||| || |||||||| ||| | |||||| |||||||||| | | | Sbjct: 176036 gcaaaccttattcctgttttgtttggagaaaacccacctatgagttccaaggatgttgcg 176095 Query: 605 aagttcagtccgtttaacaagaatttggacgactcacag 643 ||||||||||| ||||||||||||||||| || |||||| Sbjct: 176096 aagttcagtccatttaacaagaatttggatgagtcacag 176134 Score = 129 bits (65), Expect = 5e-26 Identities = 131/153 (85%) Strand = Plus / Plus Query: 1826 cataggcggatgaacgtcgccgtaacacgagcaaggcggcagtgctgcgtagtgtgcgat 1885 ||||| || ||||| || || ||||||||||| || ||||||||||| ||||||||||| Sbjct: 180510 catagacgaatgaatgttgctgtaacacgagccagaaggcagtgctgcctagtgtgcgat 180569 Query: 1886 gccgagaccgtaagcagcgacaggttcctgaaacgcctggttgagtacttcgaggagaac 1945 | ||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||| Sbjct: 180570 gtagagaccgtaagcaacgacaaattcttgaaacgcttggttgagtactttgaggagaac 180629 Query: 1946 ggcgagtacctgagtgcgtctgagtaccagagc 1978 || |||||| ||||||| || || ||||||||| Sbjct: 180630 ggggagtacttgagtgcatcagaataccagagc 180662 Score = 119 bits (60), Expect = 5e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 393 aggattcttccattaccgttgtttttgatgatattcctgaagatggattaaatagccctc 452 |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| Sbjct: 175608 aggattcttccattactgttgcctttgatgacattcctgaagatggattaaatagccctc 175667 Query: 453 tccgtcttgagaagcttgcgaatgaggt 480 |||| ||||| |||||||| |||||||| Sbjct: 175668 tccgccttgaaaagcttgcaaatgaggt 175695 Score = 115 bits (58), Expect = 7e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 314 cacgacgtggttgccctcaagccaaataaagcagatgctggatcccctgctcttgggcaa 373 ||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 175444 cacgatgtggttgctctgaagccaaataaggcagatgctggatctgctgctcttgggcaa 175503 Query: 374 ggtgtagtttatcgcttgaagg 395 |||||||||||||||||||||| Sbjct: 175504 ggtgtagtttatcgcttgaagg 175525 Score = 109 bits (55), Expect = 5e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 234 agaccgggctgatggggaagacgctcctcgagttccagcccaacaagggcgacgtgcttc 293 |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 174967 agacggggctgatggggaagacgctcctggagttccaacccaacaagggcgacgtgcttc 175026 Query: 294 cgcctcacaag 304 | ||||||||| Sbjct: 175027 cacctcacaag 175037 Score = 107 bits (54), Expect = 2e-19 Identities = 72/78 (92%) Strand = Plus / Plus Query: 830 agaacaaaattggtgaggttagggcatcctgcccgtttactaccgcaagtgttggacagt 889 ||||| ||||||||||||||||| |||||||| || |||||||| ||||||||||||||| Sbjct: 177243 agaaccaaattggtgaggttaggccatcctgctcgattactaccccaagtgttggacagt 177302 Query: 890 gctcttgatgcacaggta 907 |||||||| ||||||||| Sbjct: 177303 gctcttgacgcacaggta 177320 Score = 103 bits (52), Expect = 3e-18 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1422 agatcaaagcgcattctagtgttgctgggcatatgctctatgatcttgaaggagtgaata 1481 |||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| | Sbjct: 179173 agatcaaagctcattctagtgttgctgatcatatgctctatgacattgaagaagtgaaaa 179232 Query: 1482 aatcttcttcaacagagccaactattatactcgttgacactacagggt 1529 ||||||||| |||||||| ||||| ||||| |||||||||| |||| Sbjct: 179233 gatcttcttccacagagccgactatcatactaattgacactactgggt 179280 Score = 77.8 bits (39), Expect = 2e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 85 gatgatgtcgctccaggagttcgtctcctccatggcgcccctcatcgacctggagaagg 143 |||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 174596 gatggtgtcgctgcaggagttcgtctcgtccatggcgcctctcatagacctggagaagg 174654 Score = 77.8 bits (39), Expect = 2e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 141 aggcggcggagatatcggcggagtcggaggccagctccaagaggaaggagaggcgagggt 200 ||||||||||||||||||||||||||| | | ||||| |||| |||||| | || | Sbjct: 174759 aggcggcggagatatcggcggagtcggcgacgagctcgaagaccctcgagaggaggggtt 174818 Query: 201 ccgtcatgcccaacctcaagtgcaccgacgcccag 235 ||||||| |||||||||||||||||||||||||| Sbjct: 174819 gcgtcatggccaacctcaagtgcaccgacgcccag 174853 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 902 caggtactccgagcagataatagcagcttggctggagacattcgcaaggaaatgaaggt 960 |||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 177645 caggtattgcgagcagataacagcagcttagcaggagatattcgcaaagaaatgaaggt 177703
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 311 bits (157), Expect = 6e-81 Identities = 235/261 (90%) Strand = Plus / Plus Query: 957 aggtgcttaatagcaaattgctgaaagctaaagatagaaacacaaaaagagatatcagga 1016 ||||||||||||||||||||||||||||||| |||| || |||||||| || ||||||| Sbjct: 21478017 aggtgcttaatagcaaattgctgaaagctaaggataagaatacaaaaagggacatcagga 21478076 Query: 1017 aagagcttaaaacccttgccaaagaggagcgaaaacggcagcagcttgcagtcgctgatg 1076 ||||||| | ||||||||||||||| ||| ||||||| || |||||||| || ||||||| Sbjct: 21478077 aagagctcagaacccttgccaaagaagagagaaaacgacaacagcttgctgttgctgatg 21478136 Query: 1077 tcataaaaaatgcagatgttgtgctgtcgactttgacaggtgcatcttccaaaaagatag 1136 | |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| Sbjct: 21478137 tgataaaaaatgcagatgttgtactgtcgactttgactggtgcatcttccaaaaagctag 21478196 Query: 1137 ctggcatttcatttgatttggtaattattgatgaggctgctcaggcactcgaggtggcat 1196 ||| ||| ||||||||||||| ||||||||||| |||||||||||||| ||| |||||| Sbjct: 21478197 atggtattacatttgatttggtcattattgatgaagctgctcaggcacttgagatggcat 21478256 Query: 1197 gttggatagccttactgaagg 1217 |||||||||||||| |||||| Sbjct: 21478257 gttggatagccttattgaagg 21478277 Score = 236 bits (119), Expect = 3e-58 Identities = 182/203 (89%) Strand = Plus / Plus Query: 1221 caaggtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgagg 1280 |||| ||||| |||||||||||||||||||| |||||||| || |||||||||| ||||| Sbjct: 21478895 caagatgtgtgcttgctggagaccatcttcaacttcctccgactatccaaagtgctgagg 21478954 Query: 1281 ctgagaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatg 1340 ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 21478955 ctgagaagaaggggatgggaaagacactctttgaacgccttactgaagcttatggagatc 21479014 Query: 1341 aaatcacatccatgctcactgtccagtataggatgcacgagctaatcatgaactggtcat 1400 |||| ||||||||||||||| ||||||| || ||||| ||||| || ||||| ||||||| Sbjct: 21479015 aaattacatccatgctcactatccagtacagaatgcatgagctcataatgaattggtcat 21479074 Query: 1401 caaaagaactttacagtaacaag 1423 | ||||||||||| | ||||||| Sbjct: 21479075 ctaaagaactttataataacaag 21479097 Score = 200 bits (101), Expect = 2e-47 Identities = 160/182 (87%) Strand = Plus / Plus Query: 641 cagaaagatgctatctcgaaggcgctcagatccagggatgnnnnnnngcttcatggacct 700 ||||||||||||||||||||||| ||||| || ||||||| ||||||||||||| Sbjct: 21476992 cagaaagatgctatctcgaaggccctcaggtcaagggatgttttcttgcttcatggacct 21477051 Query: 701 cctggaactggaaagacaacaaccaacattgagataatattgcaggaggtcaagcgtgga 760 ||||| ||||| ||||||||||| | |||||||||||||||||||||||| || |||||| Sbjct: 21477052 cctggcactgggaagacaacaactatcattgagataatattgcaggaggtgaaacgtgga 21477111 Query: 761 gcaaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgactc 820 |||| |||||||||||||||||||| || || || |||||||||||||||||||||||| Sbjct: 21477112 tcaaagattcttgcttgtgctgcttctaacatcgccgtggataacattgttgagcgactc 21477171 Query: 821 tc 822 || Sbjct: 21477172 tc 21477173 Score = 198 bits (100), Expect = 6e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 1527 ggtgtgacatggaagaggtgaaagatgaagaggagagcaccatgaatgagggcgaggctg 1586 |||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 21479808 ggtgtgacatggaagaagtaaaagatgaggaggagagcactatgaatgagggtgaggctg 21479867 Query: 1587 cagtatccattgctcatgccaagttgcttgttgagagtggtgtccgtgcatctgatattg 1646 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 21479868 cagtatccattgctcatgccaagctgcttgttgagagtggtgtccgtgcatctgatattg 21479927 Query: 1647 gcattattacgccatattctgcccaggt 1674 | || ||||| || ||| |||| ||||| Sbjct: 21479928 gaataattacaccttatgctgcacaggt 21479955 Score = 172 bits (87), Expect = 4e-39 Identities = 126/139 (90%) Strand = Plus / Plus Query: 1671 aggtaacctgcctgaaaatgatgagaaataaagatgctaaattgaaggacttggagatat 1730 |||||||||| ||||| ||||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 21480106 aggtaacctgtctgaagatgatgagaaacaaagatactaaactgaaggacttggagatat 21480165 Query: 1731 caacggttgatgggtttcagggtagggagaaagaggccataatcatttcgatggtcagat 1790 | || ||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 21480166 cgacagttgatgggttccagggtagggagaaagaagccatcatcatttcaatggtcagat 21480225 Query: 1791 ccaaccaaaagaaagaggt 1809 ||||| |||||||||||| Sbjct: 21480226 ccaactcaaagaaagaggt 21480244 Score = 149 bits (75), Expect = 5e-32 Identities = 138/159 (86%) Strand = Plus / Plus Query: 485 taccgcaggatgaaagatgcactaattcaacttagcaagggcatccaagcaggaccttct 544 |||||||||||||| ||||||||| |||||||||| |||||||| ||| |||| ||||| Sbjct: 21476094 taccgcaggatgaaggatgcactagttcaacttagtaagggcattcaaacaggcccttca 21476153 Query: 545 gcaaaccttgttcctgtgttatttggagagaactcgcctatgcgttccaaggacgccgtg 604 ||||||||| ||||||| || |||||||| ||| | |||||| |||||||||| | | | Sbjct: 21476154 gcaaaccttattcctgttttgtttggagaaaacccacctatgagttccaaggatgttgcg 21476213 Query: 605 aagttcagtccgtttaacaagaatttggacgactcacag 643 ||||||||||| ||||||||||||||||| || |||||| Sbjct: 21476214 aagttcagtccatttaacaagaatttggatgagtcacag 21476252 Score = 129 bits (65), Expect = 5e-26 Identities = 131/153 (85%) Strand = Plus / Plus Query: 1826 cataggcggatgaacgtcgccgtaacacgagcaaggcggcagtgctgcgtagtgtgcgat 1885 ||||| || ||||| || || ||||||||||| || ||||||||||| ||||||||||| Sbjct: 21480628 catagacgaatgaatgttgctgtaacacgagccagaaggcagtgctgcctagtgtgcgat 21480687 Query: 1886 gccgagaccgtaagcagcgacaggttcctgaaacgcctggttgagtacttcgaggagaac 1945 | ||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||| Sbjct: 21480688 gtagagaccgtaagcaacgacaaattcttgaaacgcttggttgagtactttgaggagaac 21480747 Query: 1946 ggcgagtacctgagtgcgtctgagtaccagagc 1978 || |||||| ||||||| || || ||||||||| Sbjct: 21480748 ggggagtacttgagtgcatcagaataccagagc 21480780 Score = 119 bits (60), Expect = 5e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 393 aggattcttccattaccgttgtttttgatgatattcctgaagatggattaaatagccctc 452 |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| Sbjct: 21475726 aggattcttccattactgttgcctttgatgacattcctgaagatggattaaatagccctc 21475785 Query: 453 tccgtcttgagaagcttgcgaatgaggt 480 |||| ||||| |||||||| |||||||| Sbjct: 21475786 tccgccttgaaaagcttgcaaatgaggt 21475813 Score = 115 bits (58), Expect = 7e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 314 cacgacgtggttgccctcaagccaaataaagcagatgctggatcccctgctcttgggcaa 373 ||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 21475562 cacgatgtggttgctctgaagccaaataaggcagatgctggatctgctgctcttgggcaa 21475621 Query: 374 ggtgtagtttatcgcttgaagg 395 |||||||||||||||||||||| Sbjct: 21475622 ggtgtagtttatcgcttgaagg 21475643 Score = 109 bits (55), Expect = 5e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 234 agaccgggctgatggggaagacgctcctcgagttccagcccaacaagggcgacgtgcttc 293 |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 21475085 agacggggctgatggggaagacgctcctggagttccaacccaacaagggcgacgtgcttc 21475144 Query: 294 cgcctcacaag 304 | ||||||||| Sbjct: 21475145 cacctcacaag 21475155 Score = 107 bits (54), Expect = 2e-19 Identities = 72/78 (92%) Strand = Plus / Plus Query: 830 agaacaaaattggtgaggttagggcatcctgcccgtttactaccgcaagtgttggacagt 889 ||||| ||||||||||||||||| |||||||| || |||||||| ||||||||||||||| Sbjct: 21477361 agaaccaaattggtgaggttaggccatcctgctcgattactaccccaagtgttggacagt 21477420 Query: 890 gctcttgatgcacaggta 907 |||||||| ||||||||| Sbjct: 21477421 gctcttgacgcacaggta 21477438 Score = 103 bits (52), Expect = 3e-18 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1422 agatcaaagcgcattctagtgttgctgggcatatgctctatgatcttgaaggagtgaata 1481 |||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| | Sbjct: 21479291 agatcaaagctcattctagtgttgctgatcatatgctctatgacattgaagaagtgaaaa 21479350 Query: 1482 aatcttcttcaacagagccaactattatactcgttgacactacagggt 1529 ||||||||| |||||||| ||||| ||||| |||||||||| |||| Sbjct: 21479351 gatcttcttccacagagccgactatcatactaattgacactactgggt 21479398 Score = 77.8 bits (39), Expect = 2e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 85 gatgatgtcgctccaggagttcgtctcctccatggcgcccctcatcgacctggagaagg 143 |||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 21474714 gatggtgtcgctgcaggagttcgtctcgtccatggcgcctctcatagacctggagaagg 21474772 Score = 77.8 bits (39), Expect = 2e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 141 aggcggcggagatatcggcggagtcggaggccagctccaagaggaaggagaggcgagggt 200 ||||||||||||||||||||||||||| | | ||||| |||| |||||| | || | Sbjct: 21474877 aggcggcggagatatcggcggagtcggcgacgagctcgaagaccctcgagaggaggggtt 21474936 Query: 201 ccgtcatgcccaacctcaagtgcaccgacgcccag 235 ||||||| |||||||||||||||||||||||||| Sbjct: 21474937 gcgtcatggccaacctcaagtgcaccgacgcccag 21474971 Score = 61.9 bits (31), Expect = 1e-05 Identities = 52/59 (88%) Strand = Plus / Plus Query: 902 caggtactccgagcagataatagcagcttggctggagacattcgcaaggaaatgaaggt 960 |||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 21477763 caggtattgcgagcagataacagcagcttagcaggagatattcgcaaagaaatgaaggt 21477821
>gb|AC182686.2| Populus trichocarpa clone Pop1-37M17, complete sequence Length = 159177 Score = 172 bits (87), Expect = 4e-39 Identities = 168/195 (86%) Strand = Plus / Minus Query: 1221 caaggtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgagg 1280 |||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 42673 caaggtgtatacttgcaggagaccatcttcagcttcctccaaccatccaaagtgttgaag 42614 Query: 1281 ctgagaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatg 1340 |||||||||| || |||||| || |||||||||||||| || || |||||||||| Sbjct: 42613 ctgagaagaaagggctgggaagaaccctctttgaacgcctcacggatctgtatggagatg 42554 Query: 1341 aaatcacatccatgctcactgtccagtataggatgcacgagctaatcatgaactggtcat 1400 || |||| || ||||||||||||||||| | ||||| || ||||| ||||||||||||| Sbjct: 42553 aagtcacttctatgctcactgtccagtaccgcatgcatgaactaattatgaactggtcat 42494 Query: 1401 caaaagaactttaca 1415 | ||||| ||||||| Sbjct: 42493 ctaaagagctttaca 42479 Score = 67.9 bits (34), Expect = 2e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 842 gtgaggttagggcatcctgcccgtttactaccgcaagtgttggacagtgctcttgatgca 901 ||||| || ||||||||||| || || ||||| ||||| ||||||||||| ||||||||| Sbjct: 45187 gtgagattggggcatcctgcacgcttgctacctcaagtattggacagtgcacttgatgca 45128 Query: 902 caggta 907 |||||| Sbjct: 45127 caggta 45122 Score = 67.9 bits (34), Expect = 2e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||| ||||||||||| || |||||||| || ||||||||||||||||| Sbjct: 45610 caaagattcttgcatgtgctgcttcaaacattgctgtcgacaacattgttgagcgact 45553 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcact 1185 ||||||||||| ||||||||||| |||||||||||||| Sbjct: 43251 tttgatttggtgattattgatgaagctgctcaggcact 43214 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 353 ggatcccctgctcttgggcaaggtgtagtttatcg 387 ||||||||||||||||| |||||||| |||||||| Sbjct: 47299 ggatcccctgctcttggtcaaggtgttgtttatcg 47265 Score = 50.1 bits (25), Expect = 0.036 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1073 gatgtcataaaaaatgcagatgttgtgctgtcgactttgacaggtgcat 1121 ||||| || |||||||||||||| ||| || |||||||||| ||||||| Sbjct: 43326 gatgtaattaaaaatgcagatgtggtgttgacgactttgactggtgcat 43278 Score = 48.1 bits (24), Expect = 0.14 Identities = 30/32 (93%) Strand = Plus / Minus Query: 692 catggacctcctggaactggaaagacaacaac 723 ||||||||||||||||||||||| || ||||| Sbjct: 45680 catggacctcctggaactggaaaaaccacaac 45649 Score = 46.1 bits (23), Expect = 0.56 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1806 aggttgggttcttgagcgaccataggcggatgaacgtcgccgtaacacgagcaag 1860 |||| ||||| ||||| ||||||||||||||||| || || || ||||| ||||| Sbjct: 41342 aggtggggtttttgagtgaccataggcggatgaatgtggctgtgacacgggcaag 41288
>ref|NM_126379.2| Arabidopsis thaliana unknown protein (AT2G03280) mRNA, complete cds Length = 3632 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Minus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 2558 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 2499 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 2498 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 2439 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 2438 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 2379 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 2378 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 2319 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 2318 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 2260 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 2944 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 2887 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 3346 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 3287 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 3286 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 3227 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 3226 cgtatcgtaggatgaaagat 3207 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2180 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 2139
>ref|NM_126378.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / nucleoside-triphosphatase/ nucleotide binding (AT2G03270) mRNA, complete cds Length = 2169 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 1198 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 1257 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 1258 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 1317 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 1318 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 1377 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 1378 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 1437 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1438 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 1496 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 812 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 869 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 410 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 469 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 470 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 529 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 530 cgtatcgtaggatgaaagat 549 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 1576 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 1617
>gb|AY091361.1| Arabidopsis thaliana putative helicase (At2g03270) mRNA, complete cds Length = 1951 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 1087 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 1146 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 1147 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 1206 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 1207 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 1266 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 1267 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 1326 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1327 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 1385 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 701 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 758 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 299 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 358 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 359 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 418 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 419 cgtatcgtaggatgaaagat 438 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 1465 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 1506
>gb|AY045820.1| Arabidopsis thaliana putative helicase (At2g03270) mRNA, complete cds Length = 2189 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 1198 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 1257 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 1258 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 1317 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 1318 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 1377 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 1378 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 1437 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1438 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 1496 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 812 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 869 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 410 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 469 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 470 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 529 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 530 cgtatcgtaggatgaaagat 549 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 1576 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 1617
>gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map CIC11A04, complete sequence Length = 89137 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Minus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 84592 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 84533 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 84532 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 84473 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 84472 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 84413 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 84412 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 84353 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 84352 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 84294 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 84978 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 84921 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 85380 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 85321 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 85320 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 85261 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 85260 cgtatcgtaggatgaaagat 85241 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 84214 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 84173
>gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E12 map CIC11A04, complete sequence Length = 91318 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Minus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 18423 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 18364 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 18363 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 18304 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 18303 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 18244 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 18243 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 18184 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 18183 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 18125 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 18809 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 18752 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 19211 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 19152 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 19151 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 19092 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 19091 cgtatcgtaggatgaaagat 19072 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 18045 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 18004
>emb|BX824753.1|CNS0A7U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2209 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 1236 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 1295 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 1296 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 1355 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 1356 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 1415 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 1416 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 1475 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1476 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 1534 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 1614 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 1655
>emb|AJ300306.1|ATH300306 Arabidopsis thaliana mRNA for putative helicase (atpc-2 gene) Length = 1908 Score = 125 bits (63), Expect = 8e-25 Identities = 240/299 (80%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggatagcc 1207 ||||| ||||| || |||||||| | || ||||| || ||||| |||||||||||||| Sbjct: 1075 tttgacttggtgatcattgatgaaggagcacaggctcttgaggtagcatgttggatagct 1134 Query: 1208 ttactgaagggggcaaggtgtgtacttgctggagaccatcttcagcttcctccaacgatc 1267 || || ||||| |||| ||| ||||||| ||||||||||| || || || || || ||| Sbjct: 1135 ttgctaaagggttcaagatgtatacttgcaggagaccatctccaactcccacctacaatc 1194 Query: 1268 caaagtgttgaggctgagaagaagggtatgggaaagacactctttgaacgccttacagaa 1327 ||||||| ||| ||||| | ||| || | || | |||||||||||||| || | || Sbjct: 1195 caaagtgctgaagctgaaaggaaaggattagggagaacactctttgaacgactagcggat 1254 Query: 1328 ggttatggagatgaaatcacatccatgctcactgtccagtataggatgcacgagctaatc 1387 |||||||||||| |||| |||||||| |||||||||||| | ||||| ||||| || Sbjct: 1255 ctttatggagatgagatcaagtccatgcttactgtccagtatcgtatgcatgagcttata 1314 Query: 1388 atgaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1315 atgaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 1373 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 762 caaaaattcttgcttgtgctgcttccaatattgctgtggataacattgttgagcgact 819 |||| |||||||||||||| ||||| |||||||| || ||||| ||||||||| |||| Sbjct: 689 caaagattcttgcttgtgcagcttcgaatattgcagttgataatattgttgagagact 746 Score = 56.0 bits (28), Expect = 6e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 363 ctcttgggcaaggtgtagtttatcgcttgaaggattcttccattaccgttgtttttgatg 422 |||||| |||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 287 ctcttgcgcaaggagttgtttaccggttaaaggattcttcgattactgttgtgtttgatg 346 Query: 423 atattcctgaagatggattaaatagccctctccgtcttgagaagcttgcgaatgaggtta 482 | | |||||||| || ||||| | |||| | | ||||| |||||||||||||| | Sbjct: 347 aggtacctgaagaagggttaaacacgtctcttaggttggagaaacttgcgaatgaggtga 406 Query: 483 cttaccgcaggatgaaagat 502 | || || |||||||||||| Sbjct: 407 cgtatcgtaggatgaaagat 426 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 1453 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 1494
>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence Length = 111446 Score = 111 bits (56), Expect = 1e-20 Identities = 125/148 (84%) Strand = Plus / Plus Query: 1221 caaggtgtgtacttgctggagaccatcttcagcttcctccaacgatccaaagtgttgagg 1280 |||| ||| ||||||| |||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 93159 caagatgtatacttgcaggagaccatcttcaacttcctccaacgattcaaagtgttgaag 93218 Query: 1281 ctgagaagaagggtatgggaaagacactctttgaacgccttacagaaggttatggagatg 1340 |||||||||| || | || | || ||||||||| | ||| ||||| |||||||||| Sbjct: 93219 ctgagaagaaaggcttagggagaaccctctttgaaagacttgcagaactgtatggagatg 93278 Query: 1341 aaatcacatccatgctcactgtccagta 1368 || ||||||| ||||| ||||||||||| Sbjct: 93279 aagtcacatctatgcttactgtccagta 93306 Score = 65.9 bits (33), Expect = 6e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 692 catggacctcctggaactggaaagacaacaaccaacattgagataatattgcaggaggtc 751 ||||||||||||||||| ||||| || ||||| |||| || ||||| || || || Sbjct: 90741 catggacctcctggaacgggaaaaactacaacagtggttgaaattatattacaagaagtg 90800 Query: 752 aagcgtggagcaaaaattcttgcttgtgctgcttccaatattgctgtggataacattgtt 811 || |||||| | || ||||||||||||||||| || ||||||||||| || ||||| ||| Sbjct: 90801 aaacgtggatctaagattcttgcttgtgctgcctcaaatattgctgttgacaacatcgtt 90860 Query: 812 gagcg 816 ||||| Sbjct: 90861 gagcg 90865 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 1144 ttcatttgatttggtaattattgatgaggctgctcaggcactcgaggtggcatgttggat 1203 |||||||||||| || |||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 92652 ttcatttgatttagtgattattgacgaagctgctcaagcacttgaggttgcatgctggat 92711 Query: 1204 a 1204 | Sbjct: 92712 a 92712 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1637 tctgatattggcattattacgccatattctgcccaggta 1675 ||||||||||| |||||||| |||||| ||||||||||| Sbjct: 94066 tctgatattggaattattaccccatatgctgcccaggta 94104 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Plus Query: 359 cctgctcttgggcaaggtgtagttta 384 |||||||||||||||||||||||||| Sbjct: 89055 cctgctcttgggcaaggtgtagttta 89080 Score = 42.1 bits (21), Expect = 8.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 404 attaccgttgtttttgatgatattcctgaagatggattaaa 444 ||||| |||| |||||||||||| || |||||||| ||||| Sbjct: 89213 attactgttgcttttgatgatataccagaagatggtttaaa 89253
>gb|AC182574.2| Mimulus guttatus clone MGBa-83E5, complete sequence Length = 139993 Score = 77.8 bits (39), Expect = 2e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 749 gtcaagcgtggagcaaaaattcttgcttgtgctgcttccaatattgctgtggataacat 807 |||||||||||| ||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 7694 gtcaagcgtggatcaaaaatccttgcttgtgctgcttctaatattgcagttgataacat 7752 Score = 50.1 bits (25), Expect = 0.036 Identities = 49/57 (85%) Strand = Plus / Plus Query: 851 gggcatcctgcccgtttactaccgcaagtgttggacagtgctcttgatgcacaggta 907 ||||||||||| || ||||| || ||| | |||||||||||| | |||||||||||| Sbjct: 8166 gggcatcctgcacgcttacttcctcaaatattggacagtgctttagatgcacaggta 8222 Score = 50.1 bits (25), Expect = 0.036 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1250 cagcttcctccaacgatccaaagtgttgaggctgagaagaa 1290 |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 9505 cagcttcccccaactattcaaagtgttgaagctgagaagaa 9545
>ref|NM_001035886.1| Arabidopsis thaliana unknown protein (AT2G03280) mRNA, complete cds Length = 2344 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2297 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 2256
>ref|XM_661994.1| Cryptosporidium hominis TU502 replication factor C3 (Chro.30359) partial mRNA Length = 1134 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 catggacctcctggaactggaaagac 717 |||||||||||||||||||||||||| Sbjct: 133 catggacctcctggaactggaaagac 158
>ref|XM_626870.1| Cryptosporidium parvum Iowa II replication factor RFC3 AAA+ ATpase (cgd3_3170), partial mRNA Length = 1152 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Plus Query: 692 catggacctcctggaactggaaagac 717 |||||||||||||||||||||||||| Sbjct: 151 catggacctcctggaactggaaagac 176
>emb|BX819353.1|CNS0A7Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 729 Score = 52.0 bits (26), Expect = 0.009 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1526 gggtgtgacatggaagaggtgaaagatgaagaggagagcacc 1567 |||||||||||||||||| ||||||||| || ||||||||| Sbjct: 137 gggtgtgacatggaagagaagaaagatgaggaagagagcacc 178 Score = 50.1 bits (25), Expect = 0.036 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1390 gaactggtcatcaaaagaactttacagtaacaagatcaaagcgcattctagtgttgc 1446 |||||||||||| ||||| |||||| |||||||| | ||||||||| |||||||| Sbjct: 1 gaactggtcatccaaagagctttacgacaacaagataacagcgcattcaagtgttgc 57
>ref|NM_118619.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding (AT4G24860) mRNA, complete cds Length = 3400 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagac 717 |||||||||||||||||||||||| Sbjct: 2583 tggacctcctggaactggaaagac 2606
>gb|AY142498.1| Arabidopsis thaliana unknown protein (At4g24850) mRNA, complete cds Length = 1360 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagac 717 |||||||||||||||||||||||| Sbjct: 543 tggacctcctggaactggaaagac 566
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 694 tggacctcctggaactggaaagac 717 |||||||||||||||||||||||| Sbjct: 77222 tggacctcctggaactggaaagac 77199
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 694 tggacctcctggaactggaaagac 717 |||||||||||||||||||||||| Sbjct: 47798 tggacctcctggaactggaaagac 47775
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 803 ggacctcctggaactggaaagac 825
>ref|XM_675829.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7652.2), mRNA Length = 2061 Score = 46.1 bits (23), Expect = 0.56 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1147 atttgatttggtaattattgatgaggctgctcaggcact 1185 ||||||| | |||||||||||||||||| ||||||||| Sbjct: 1260 atttgatgtcgtaattattgatgaggctagtcaggcact 1298
>gb|AC120845.11| Mus musculus chromosome 3, clone RP23-468E4, complete sequence Length = 174129 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1282 tgagaagaagggtatgggaaaga 1304 ||||||||||||||||||||||| Sbjct: 86876 tgagaagaagggtatgggaaaga 86854
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 864 ggacctcctggaactggaaagac 886
>ref|XM_390943.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10767.1) partial mRNA Length = 3138 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 2374 ggacctcctggaactggaaagac 2396
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 153755 ggacctcctggaactggaaagac 153733
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 128930 ggacctcctggaactggaaagac 128952
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 733 ggacctcctggaactggaaagac 755
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 695 ggacctcctggaactggaaagac 717 ||||||||||||||||||||||| Sbjct: 827 ggacctcctggaactggaaagac 849
>gb|CP000444.1| Shewanella sp. MR-7, complete genome Length = 4792610 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1148 tttgatttggtaattattgatgaggc 1173 ||||||||||| |||||||||||||| Sbjct: 618581 tttgatttggtcattattgatgaggc 618556
>gb|CP000446.1| Shewanella sp. MR-4, complete genome Length = 4706287 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1148 tttgatttggtaattattgatgaggc 1173 ||||||||||| |||||||||||||| Sbjct: 4082429 tttgatttggtcattattgatgaggc 4082454
>ref|XM_001071317.1| PREDICTED: Rattus norvegicus target of EGR1, member 1 (nuclear) (predicted) (Toe1_predicted), mRNA Length = 2620 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1241 gaccatcttcagcttcctccaa 1262 |||||||||||||||||||||| Sbjct: 1096 gaccatcttcagcttcctccaa 1075
>ref|XM_216504.4| PREDICTED: Rattus norvegicus target of EGR1, member 1 (nuclear) (predicted) (Toe1_predicted), mRNA Length = 2620 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1241 gaccatcttcagcttcctccaa 1262 |||||||||||||||||||||| Sbjct: 1096 gaccatcttcagcttcctccaa 1075
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 693 atggacctcctggaactggaaagaca 718 ||||||||||||| |||||||||||| Sbjct: 4204122 atggacctcctggcactggaaagaca 4204097
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 688 gcttcatggacctcctggaactggaaagac 717 |||| ||||||||||||| ||||||||||| Sbjct: 754 gctttatggacctcctggcactggaaagac 783
>gb|AY223282.1| Schistosoma japonicum clone ZZD502 mRNA sequence Length = 1642 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 688 gcttcatggacctcctggaactggaaagac 717 |||| ||||||||||||| ||||||||||| Sbjct: 714 gctttatggacctcctggcactggaaagac 743
>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence Length = 190901 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1188 aggtggcatgttggatagcctt 1209 |||||||||||||||||||||| Sbjct: 8461 aggtggcatgttggatagcctt 8440
>ref|XM_385772.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05596.1) partial mRNA Length = 3420 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagaca 718 |||| ||||||||||||||||||||| Sbjct: 2369 atggccctcctggaactggaaagaca 2394
>gb|AC122152.3| Oryctolagus cuniculus clone LB1-297M16, complete sequence Length = 189392 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1188 aggtggcatgttggatagcctt 1209 |||||||||||||||||||||| Sbjct: 159112 aggtggcatgttggatagcctt 159091
>ref|XR_026621.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC577627 (LOC577627), mRNA Length = 4664 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||||||||| |||||| Sbjct: 2530 tggacctcctggaactggtaagaca 2554
>ref|XR_026509.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC577627 (LOC577627), mRNA Length = 4664 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||||||||| |||||| Sbjct: 2530 tggacctcctggaactggtaagaca 2554
>gb|BC125262.1| Mus musculus zinc finger, CW type with PWWP domain 2, mRNA (cDNA clone MGC:141053 IMAGE:40050118), complete cds Length = 3772 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2332 tggacctcctggtactggaaagaca 2356
>ref|XR_020218.1| PREDICTED: Pan troglodytes MOV10-like 1 (MOV10L1), mRNA Length = 4013 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2432 tggacctcctggtactggaaagaca 2456
>gb|AC186906.3| Echinops telfairi clone CH238-382C21, complete sequence Length = 152872 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1676 acctgcctgaaaatgatgagaaata 1700 ||||||||| ||||||||||||||| Sbjct: 2710 acctgcctggaaatgatgagaaata 2686
>gb|BC123217.1| Xenopus laevis katanin p60, mRNA (cDNA clone MGC:154459 IMAGE:8079239), complete cds Length = 1760 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaa 714 ||||||||||||||||||||| Sbjct: 850 tggacctcctggaactggaaa 870
>ref|NM_001047998.1| Ciona intestinalis zinc finger protein 2 (zf(an1/a20like)-2), mRNA tpd|BR000114.1| TPA_exp: Ciona intestinalis Ci-ZF(AN1/A20like)-2 mRNA for zinc finger protein, complete cds Length = 3418 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 692 catggacctcctggaactggaaagacaac 720 |||||||||||||||||||| || ||||| Sbjct: 636 catggacctcctggaactgggaaaacaac 664
>dbj|AK226334.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-14-K07 Length = 1528 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 536 atggacctcctggtactggaaagac 560
>gb|AC183994.3| Echinops telfairi clone CH238-441G7, complete sequence Length = 180922 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1676 acctgcctgaaaatgatgagaaata 1700 ||||||||| ||||||||||||||| Sbjct: 159403 acctgcctggaaatgatgagaaata 159379
>gb|AC149881.2| Xenopus tropicalis clone CH216-75E11, complete sequence Length = 191843 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1549 agatgaagaggagagcaccat 1569 ||||||||||||||||||||| Sbjct: 134380 agatgaagaggagagcaccat 134400
>emb|CU013304.1| Homo sapiens MOV10L1, mRNA (cDNA clone IMAGE:100000082), complete cds, without stop codon, in Gateway system Length = 3667 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2326 tggacctcctggtactggaaagaca 2350
>emb|CU013016.1| Homo sapiens MOV10L1, mRNA (cDNA clone IMAGE:100000178), complete cds, with stop codon, in Gateway system Length = 3670 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2326 tggacctcctggtactggaaagaca 2350
>emb|CT572985.12| Mouse DNA sequence from clone RP23-23I2 on chromosome 13, complete sequence Length = 249371 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1539 aagaggtgaaagatgaagaggagag 1563 |||||||||||| |||||||||||| Sbjct: 188062 aagaggtgaaaggtgaagaggagag 188038
>ref|NM_112415.3| Arabidopsis thaliana signal transducer (AT3G15470) mRNA, complete cds Length = 3370 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gttgaggctgagaagaagggt 1294 ||||||||||||||||||||| Sbjct: 1677 gttgaggctgagaagaagggt 1697
>ref|NM_102593.3| Arabidopsis thaliana unknown protein (AT1G28280) mRNA, complete cds Length = 1402 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2216 tttcttgttattattattttc 2236 ||||||||||||||||||||| Sbjct: 1290 tttcttgttattattattttc 1310
>ref|NM_106604.2| Arabidopsis thaliana EMB1047/FTSH12; ATP-dependent peptidase/ ATPase/ metallopeptidase (EMB1047/FTSH12) mRNA, complete cds Length = 3907 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaa 714 ||||||||||||||||||||| Sbjct: 1778 tggacctcctggaactggaaa 1798
>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase (RPT3) mRNA, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 661 atggacctcctggtactggaaagac 685
>ref|NM_118907.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding (AT4G27680) mRNA, complete cds Length = 1610 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 531 atggacctcctggtactggaaagac 555
>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 584 atggacctcctggtactggaaagac 608
>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093C16, complete sequence Length = 206612 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 373 aggtgtagtttatcgcttgaaggat 397 |||||||||||||||||||| |||| Sbjct: 115902 aggtgtagtttatcgcttgacggat 115878
>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0002L02, complete sequence Length = 165685 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 373 aggtgtagtttatcgcttgaaggat 397 |||||||||||||||||||| |||| Sbjct: 8041 aggtgtagtttatcgcttgacggat 8017
>gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, complete sequence Length = 159841 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1197 gttggatagccttactgaagg 1217 ||||||||||||||||||||| Sbjct: 136055 gttggatagccttactgaagg 136035
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 gaccttctgcaaaccttgttcctgt 561 |||||||||||| |||||||||||| Sbjct: 178638 gaccttctgcaagccttgttcctgt 178662
>ref|XM_452318.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C02717g predicted mRNA Length = 3561 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2264 atttttattatgagattgatc 2284 ||||||||||||||||||||| Sbjct: 2513 atttttattatgagattgatc 2533
>gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-246M15, complete sequence Length = 113092 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2159 tgctgtgtggagtgtagcagt 2179 ||||||||||||||||||||| Sbjct: 52613 tgctgtgtggagtgtagcagt 52633
>gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosome 12, complete sequence Length = 176940 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1537 ggaagaggtgaaagatgaagaggag 1561 ||||||||||||||| ||||||||| Sbjct: 40614 ggaagaggtgaaagaggaagaggag 40590
>gb|AC164405.4| Mus musculus chromosome 3, clone RP24-286C1, complete sequence Length = 159535 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1197 gttggatagccttactgaagg 1217 ||||||||||||||||||||| Sbjct: 5338 gttggatagccttactgaagg 5318
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence Length = 235363 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1537 ggaagaggtgaaagatgaagaggag 1561 ||||||||||||||| ||||||||| Sbjct: 176552 ggaagaggtgaaagaggaagaggag 176576
>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds Length = 660392 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 981 aagctaaagatagaaacacaaaaag 1005 |||||||||||||| |||||||||| Sbjct: 310473 aagctaaagatagagacacaaaaag 310449
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 867 atggacctcctggaactgggaagac 891
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_861028.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 8 (LOC481590), mRNA Length = 2404 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_861011.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 7 (LOC481590), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_860998.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 6 (LOC481590), mRNA Length = 1049 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 1001 atggacctcctggaactgggaagac 1025
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 1001 atggacctcctggaactgggaagac 1025
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||||||||| ||||| Sbjct: 999 atggacctcctggaactgggaagac 1023
>gb|AC124556.4| Mus musculus BAC clone RP23-246K11 from chromosome 12, complete sequence Length = 202214 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1537 ggaagaggtgaaagatgaagaggag 1561 ||||||||||||||| ||||||||| Sbjct: 189472 ggaagaggtgaaagaggaagaggag 189448
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence Length = 170182 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1537 ggaagaggtgaaagatgaagaggag 1561 ||||||||||||||| ||||||||| Sbjct: 139059 ggaagaggtgaaagaggaagaggag 139035
>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence Length = 203891 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1126 caaaaagatagctggcatttc 1146 ||||||||||||||||||||| Sbjct: 33986 caaaaagatagctggcatttc 33966
>gb|AC024081.1| Arabidopsis thaliana chromosome III P1 MJK13 genomic sequence, complete sequence Length = 82893 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1274 gttgaggctgagaagaagggt 1294 ||||||||||||||||||||| Sbjct: 32986 gttgaggctgagaagaagggt 32966
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2216 tttcttgttattattattttc 2236 ||||||||||||||||||||| Sbjct: 58879 tttcttgttattattattttc 58899
>gb|AY223320.1| Schistosoma japonicum clone ZZD636 mRNA sequence Length = 1220 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||| ||||||||||||||||| Sbjct: 221 atggaccacctggaactggaaagac 245
>gb|AC004972.2| Homo sapiens PAC clone RP5-1136A10 from 7, complete sequence Length = 140256 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 970 caaattgctgaaagctaaaga 990 ||||||||||||||||||||| Sbjct: 81686 caaattgctgaaagctaaaga 81706
>dbj|AK092675.1| Homo sapiens cDNA FLJ35356 fis, clone PUAEN2000247, weakly similar to PROTEIN MOV-10 Length = 2654 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 1226 tggacctcctggtactggaaagaca 1250
>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2217 ttcttgttattattattttcg 2237 ||||||||||||||||||||| Sbjct: 237444 ttcttgttattattattttcg 237424
>gb|BT000126.1| Arabidopsis thaliana putative protein (At4g27680) mRNA, complete cds Length = 1240 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 374 atggacctcctggtactggaaagac 398
>gb|AY035166.1| Arabidopsis thaliana putative FtsH protease (At1g79560) mRNA, partial cds Length = 2188 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaa 714 ||||||||||||||||||||| Sbjct: 511 tggacctcctggaactggaaa 531
>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19, complete sequence Length = 118451 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 984 ctaaagatagaaacacaaaaa 1004 ||||||||||||||||||||| Sbjct: 87818 ctaaagatagaaacacaaaaa 87798
>ref|XM_627194.1| Cryptosporidium parvum Iowa II replication factor C like AAA ATpase (cgd8_2940), partial mRNA Length = 1008 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 690 ttcatggacctcctggaactggaaagaca 718 ||||||| |||||||||||||| |||||| Sbjct: 134 ttcatggtcctcctggaactggtaagaca 162
>ref|NM_001006786.1| Xenopus tropicalis homeo box C8 (hoxc8), mRNA gb|BC075597.1| Xenopus tropicalis homeo box C8, mRNA (cDNA clone MGC:89609 IMAGE:6995191), complete cds Length = 2285 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1537 ggaagaggtgaaagatgaagaggagagca 1565 |||||||| |||||| ||||||||||||| Sbjct: 1059 ggaagaggagaaagaagaagaggagagca 1087
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 ttaccgttgtttttgatgata 425 ||||||||||||||||||||| Sbjct: 3306273 ttaccgttgtttttgatgata 3306253
>ref|XM_647974.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (95.t00012) partial mRNA Length = 1962 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 |||||||||||||||| |||||||| Sbjct: 1337 atggacctcctggaacaggaaagac 1361
>gb|AY093063.1| Arabidopsis thaliana putative protein (At4g27680) mRNA, complete cds Length = 1500 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 526 atggacctcctggtactggaaagac 550
>gb|AY081717.1| Arabidopsis thaliana AT3g15470/MJK13_13 mRNA, complete cds Length = 2652 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gttgaggctgagaagaagggt 1294 ||||||||||||||||||||| Sbjct: 1327 gttgaggctgagaagaagggt 1347
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1443 ttgctgggcatatgctctatgatct 1467 |||||||||||||||||| |||||| Sbjct: 17465381 ttgctgggcatatgctctgtgatct 17465357
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 373 aggtgtagtttatcgcttgaaggat 397 |||||||||||||||||||| |||| Sbjct: 9885275 aggtgtagtttatcgcttgacggat 9885251
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2214 agtttcttgttattattattt 2234 ||||||||||||||||||||| Sbjct: 22643881 agtttcttgttattattattt 22643901
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 1100 atggacctcctggtactggaaagac 1124
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 970 caaattgctgaaagctaaaga 990 ||||||||||||||||||||| Sbjct: 61773 caaattgctgaaagctaaaga 61793
>ref|XM_677692.1| PREDICTED: Danio rerio similar to Ras association (RalGDS/AF-6) domain family 5 isoform C, transcript variant 1 (LOC555392), mRNA Length = 786 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1581 aggctgcagtatccattgctcatgc 1605 ||||||||||||||| ||||||||| Sbjct: 41 aggctgcagtatccactgctcatgc 17
>emb|AL096800.20|HSDJ303A1 Human DNA sequence from clone RP1-303A1 on chromosome 6 Contains a coxsackie virus and adenovirus receptor (CXADR) pseudogene, a 1-phosphatidylinositol-4-phosphate-5-kinase (PTPDINS(4)P-5-kinase, EC 2.7.1.68) pseudogene, the 3' end of gene FLJ21789 for the ortholog of mouse muted and a CpG island, complete sequence Length = 104531 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1796 caaaagaaagaggttgggttc 1816 ||||||||||||||||||||| Sbjct: 27460 caaaagaaagaggttgggttc 27440
>emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G11 on chromosome 22q13.31-13.33 Contains the MAPK12 gene for mitogen activated protein kinase 12 (SAPK3), the MAPK11 gene for mitogen activated protein kinase 11 (PRKM11), gene KIAA0315, the gene for a novel protein similar to KIAA0901 and mouse histone deacetylase MHDA2, the gene for a novel protein similar to Xenopus gamma-tubulin interacting protein (yeast SPC98 homolog), the gene for a novel protein similar to yeast and bacterial predicted proteins, the gene for a novel protein similar to C. elegans F38A5.2, the gene for a novel protein similar to MRS1 and the gene for a novel protein similar to mouse MOV10 (GB110) and yeast and plant predicted proteins. Contains ESTs, GSSs and fifteen putative CpG islands, complete sequence Length = 177241 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 43325 tggacctcctggtactggaaagaca 43349
>gb|BC050878.1| Mus musculus, clone IMAGE:6512811, mRNA Length = 1845 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 772 tgcttgtgctgcttccaatattgct 796 ||||| ||||||||||||||||||| Sbjct: 562 tgcttctgctgcttccaatattgct 538
>gb|AY085265.1| Arabidopsis thaliana clone 142160 mRNA, complete sequence Length = 1520 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 441 atggacctcctggtactggaaagac 465
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 693 atggacctcctggaactggaaagac 717 |||||||||||||||| |||||||| Sbjct: 2375882 atggacctcctggaacaggaaagac 2375858
>emb|CR456466.1| Homo sapiens dJ402G11.8 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.dJ402G11.8) Length = 3812 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2313 tggacctcctggtactggaaagaca 2337
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2264 atttttattatgagattgatc 2284 ||||||||||||||||||||| Sbjct: 243996 atttttattatgagattgatc 243976
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 132324 atggacctcctggtactggaaagac 132348
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 71614 atggacctcctggtactggaaagac 71638
>gb|AF372960.1|AF372960 Arabidopsis thaliana AT3g15470/MJK13_13 mRNA, complete cds Length = 3240 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gttgaggctgagaagaagggt 1294 ||||||||||||||||||||| Sbjct: 1677 gttgaggctgagaagaagggt 1697
>ref|NM_018995.1| Homo sapiens Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), mRNA gb|AF285604.1|AF285604 Homo sapiens MOV10-like 1 (MOV10L1) mRNA, complete cds Length = 3910 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 2334 tggacctcctggtactggaaagaca 2358
>gb|AC145893.2| Pan troglodytes BAC clone RP43-8C18 from chromosome 7, complete sequence Length = 161780 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 970 caaattgctgaaagctaaaga 990 ||||||||||||||||||||| Sbjct: 29084 caaattgctgaaagctaaaga 29064
>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1, complete sequence Length = 188290 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cctcaagccaaataaagcaga 348 ||||||||||||||||||||| Sbjct: 35657 cctcaagccaaataaagcaga 35677
>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence Length = 80374 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 694 tggacctcctggaactggaaa 714 ||||||||||||||||||||| Sbjct: 8248 tggacctcctggaactggaaa 8228
>emb|AL133068.2|HSM801339 Homo sapiens mRNA; cDNA DKFZp434B0717 (from clone DKFZp434B0717) Length = 2332 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaagaca 718 |||||||||||| |||||||||||| Sbjct: 709 tggacctcctggtactggaaagaca 733
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 693 atggacctcctggaactggaaagac 717 |||||||||||||||| |||||||| Sbjct: 2304809 atggacctcctggaacaggaaagac 2304785
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2214 agtttcttgttattattattt 2234 ||||||||||||||||||||| Sbjct: 20593 agtttcttgttattattattt 20613
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1443 ttgctgggcatatgctctatgatct 1467 |||||||||||||||||| |||||| Sbjct: 29559 ttgctgggcatatgctctgtgatct 29535
>dbj|AB022218.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJK13 Length = 82893 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1274 gttgaggctgagaagaagggt 1294 ||||||||||||||||||||| Sbjct: 32986 gttgaggctgagaagaagggt 32966
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 42971 atggacctcctggtactggaaagac 42995
>ref|XM_956837.1| Neurospora crassa OR74A hypothetical protein (NCU05317.1) partial mRNA Length = 4455 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 704 ggaactggaaagacaacaacc 724 ||||||||||||||||||||| Sbjct: 2804 ggaactggaaagacaacaacc 2824
>emb|AL935334.14| Zebrafish DNA sequence from clone CH211-199B20 in linkage group 14, complete sequence Length = 191828 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2211 atgagtttcttgttattattatttt 2235 |||||||| |||||||||||||||| Sbjct: 104219 atgagtttattgttattattatttt 104195
>emb|BX816930.1|CNS0AD0U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1307 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2216 tttcttgttattattattttc 2236 ||||||||||||||||||||| Sbjct: 1195 tttcttgttattattattttc 1215
>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 689 atggacctcctggtactggaaagac 713
>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 633 atggacctcctggtactggaaagac 657
>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 614 atggacctcctggtactggaaagac 638
>emb|BX072582.6| Zebrafish DNA sequence from clone DKEY-222O19 in linkage group 11, complete sequence Length = 194918 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1581 aggctgcagtatccattgctcatgc 1605 ||||||||||||||| ||||||||| Sbjct: 81529 aggctgcagtatccactgctcatgc 81553
>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, complete cds Length = 1301 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 atggacctcctggaactggaaagac 717 ||||||||||||| ||||||||||| Sbjct: 625 atggacctcctggtactggaaagac 649
>gb|AF066865.1|AF066865 Bacteriophage TPW22 holin, lysin, integrase (int), and repressor protein (rap) genes, complete cds; attP site; and unknown genes Length = 8219 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 697 acctcctggaactggaaagacaacaacca 725 ||||||||||||||| |||||| |||||| Sbjct: 6876 acctcctggaactggtaagacatcaacca 6904
>gb|AC157768.4| Mus musculus chromosome 1, clone RP24-308M3, complete sequence Length = 202770 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1692 tgagaaataaagatgctaaat 1712 ||||||||||||||||||||| Sbjct: 77027 tgagaaataaagatgctaaat 77007
>gb|AF177942.1|AF177942 Xenopus laevis katanin p60 mRNA, partial cds Length = 1459 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 694 tggacctcctggaactggaaa 714 ||||||||||||||||||||| Sbjct: 735 tggacctcctggaactggaaa 755
>gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, complete sequence Length = 184316 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1692 tgagaaataaagatgctaaat 1712 ||||||||||||||||||||| Sbjct: 183007 tgagaaataaagatgctaaat 183027
>emb|CR926189.2| Xenopus tropicalis finished cDNA, clone TNeu108m10 Length = 2112 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1537 ggaagaggtgaaagatgaagaggagagca 1565 |||||||| |||||| ||||||||||||| Sbjct: 792 ggaagaggagaaagaagaagaggagagca 820
>emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-68M10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 146002 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 981 aagctaaagatagaaacacaaaaag 1005 |||||||||||||| |||||||||| Sbjct: 122263 aagctaaagatagagacacaaaaag 122287
>gb|AC129222.4| Mus musculus BAC clone RP24-532L14 from 14, complete sequence Length = 181469 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 772 tgcttgtgctgcttccaatattgct 796 ||||| ||||||||||||||||||| Sbjct: 125292 tgcttctgctgcttccaatattgct 125268
>gb|AC000392.1|AC000392 Genomic sequence from Human 9q34, complete sequence Length = 44266 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 970 caaattgctgaaagctaaaga 990 ||||||||||||||||||||| Sbjct: 7497 caaattgctgaaagctaaaga 7477
>emb|AL133370.4|CNS01DUV Human chromosome 14 DNA sequence BAC C-2566J3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155822 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 981 aagctaaagatagaaacacaaaaag 1005 |||||||||||||| |||||||||| Sbjct: 778 aagctaaagatagagacacaaaaag 802 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 404,827,719 Number of extensions: 22797417 Number of successful extensions: 125249 Number of sequences better than 10.0: 145 Number of HSP's gapped: 125244 Number of HSP's successfully gapped: 231 Length of query: 2304 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2281 Effective length of database: 18,503,978,556 Effective search space: 42207575086236 Effective search space used: 42207575086236 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
