ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf128c16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072657:Os01g0168500 | 168 | 2e-78 | 2 | AK069215:Os05g0169200 | 132 | 1e-53 | 3 | AK072525:Os01g0934000 | 95 | 2e-36 | 4 | AK060679:Os01g0934000 | 95 | 2e-36 | 5 | AK108828: | 55 | 6e-08 | 6 | AK111160: | 46 | 3e-05 | 7 | AK101857:Os01g0786900 | 36 | 0.029 | 8 | AK099795:Os05g0405900 | 36 | 0.029 | 9 | AK072244:Os05g0405900 | 36 | 0.029 | 10 | Os02g0263300:Os02g0263300 | 28 | 7.9 | 11 | AK111361:Os01g0799600 | 28 | 7.9 | 12 | AK103686:Os01g0844800 | 28 | 7.9 | 13 | AK099801:Os01g0844800 | 28 | 7.9 | 14 | AK067739:Os01g0971900 | 28 | 7.9 |
|---|
>AK072657:Os01g0168500 | Length = 417 Score = 168 bits (426), Expect(2) = 2e-78 Identities = 82/90 (91%), Positives = 85/90 (94%) Frame = +2 Query: 230 SMDPLIQTNTGSNASSSLSFMKGILPKYFSSERSFAQFHLPEITRYIVAFGAQNTVMMVG 409 S+DPLIQTNTGSNASSSLSFMKGILPKYFSSE SFAQFHLPE+TRYIVAFGAQNTVMMVG Sbjct: 319 SIDPLIQTNTGSNASSSLSFMKGILPKYFSSEWSFAQFHLPEVTRYIVAFGAQNTVMMVG 378 Query: 410 LDGSFYRCIFDQVNGGQMTQKEYSRFLKTD 499 LDGSFYRC FDQVNGGQM QKEY RF+K D Sbjct: 379 LDGSFYRCSFDQVNGGQMLQKEYFRFIKAD 408 Score = 142 bits (359), Expect(2) = 2e-78 Identities = 69/76 (90%), Positives = 75/76 (98%) Frame = +3 Query: 3 MFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLKVRVAGEDSSND 182 +FNTMDGTRLQEVRRGLDKA+IYSIALSPNVQWLAVSSDKGTVHIFSL+VRVAGED+SN+ Sbjct: 243 IFNTMDGTRLQEVRRGLDKADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDASNE 302 Query: 183 QRTLEAPRMDHQNSSS 230 QR+LE PRMDHQNSSS Sbjct: 303 QRSLEGPRMDHQNSSS 318
>AK069215:Os05g0169200 | Length = 382 Score = 132 bits (332), Expect(2) = 1e-53 Identities = 66/85 (77%), Positives = 71/85 (83%) Frame = +2 Query: 239 PLIQTNTGSNASSSLSFMKGILPKYFSSERSFAQFHLPEITRYIVAFGAQNTVMMVGLDG 418 P+ QT GSN SSSLSFMKGILPKYFSSE SFAQF LPEITRYI+AFG Q+TVMM+GLDG Sbjct: 293 PVTQTKIGSNTSSSLSFMKGILPKYFSSEWSFAQFRLPEITRYIMAFGDQDTVMMIGLDG 352 Query: 419 SFYRCIFDQVNGGQMTQKEYSRFLK 493 SFYR FD VNGG+M KEY FLK Sbjct: 353 SFYRYSFDPVNGGEMMLKEYHLFLK 377 Score = 96.3 bits (238), Expect(2) = 1e-53 Identities = 46/61 (75%), Positives = 54/61 (88%) Frame = +3 Query: 3 MFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLKVRVAGEDSSND 182 +FNT DGT +QEVRRGLD+AEIYSIALSPNVQWLAVSSDKGTVH+FSL+V+ A ED+ Sbjct: 214 IFNTRDGTCVQEVRRGLDRAEIYSIALSPNVQWLAVSSDKGTVHVFSLRVKDAEEDAKKG 273 Query: 183 Q 185 + Sbjct: 274 E 274
>AK072525:Os01g0934000 | Length = 457 Score = 95.1 bits (235), Expect(2) = 2e-36 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 1/75 (1%) Frame = +2 Query: 272 SSSLSFMKGILPKYFSSERSFAQFHLPEITRYIVAFG-AQNTVMMVGLDGSFYRCIFDQV 448 S SLSF+KG+LPKYF SE S AQF L E +YIVAFG +NTV +VG+DGSFYRC FD V Sbjct: 376 SPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPV 435 Query: 449 NGGQMTQKEYSRFLK 493 NGG+M Q E FLK Sbjct: 436 NGGEMLQLECYNFLK 450 Score = 75.5 bits (184), Expect(2) = 2e-36 Identities = 37/70 (52%), Positives = 51/70 (72%) Frame = +3 Query: 3 MFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLKVRVAGEDSSND 182 ++N +G LQEVRRG D+AEIYS+A S N+Q+LAVSSDKGT+H+F+LK+ V + + Sbjct: 305 IYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVG---LTTN 361 Query: 183 QRTLEAPRMD 212 + L AP D Sbjct: 362 DKPLPAPDPD 371
>AK060679:Os01g0934000 | Length = 457 Score = 95.1 bits (235), Expect(2) = 2e-36 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 1/75 (1%) Frame = +2 Query: 272 SSSLSFMKGILPKYFSSERSFAQFHLPEITRYIVAFG-AQNTVMMVGLDGSFYRCIFDQV 448 S SLSF+KG+LPKYF SE S AQF L E +YIVAFG +NTV +VG+DGSFYRC FD V Sbjct: 376 SPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPV 435 Query: 449 NGGQMTQKEYSRFLK 493 NGG+M Q E FLK Sbjct: 436 NGGEMLQLECYNFLK 450 Score = 75.5 bits (184), Expect(2) = 2e-36 Identities = 37/70 (52%), Positives = 51/70 (72%) Frame = +3 Query: 3 MFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLKVRVAGEDSSND 182 ++N +G LQEVRRG D+AEIYS+A S N+Q+LAVSSDKGT+H+F+LK+ V + + Sbjct: 305 IYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVG---LTTN 361 Query: 183 QRTLEAPRMD 212 + L AP D Sbjct: 362 DKPLPAPDPD 371
>AK108828: | Length = 344 Score = 55.1 bits (131), Expect = 6e-08 Identities = 25/48 (52%), Positives = 36/48 (75%) Frame = +3 Query: 3 MFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSL 146 ++N G L+E+RRG+D+A+IY IA + ++A SSDKGT+HIFSL Sbjct: 30 LWNCYTGEPLRELRRGMDRADIYCIAFNTASTYIACSSDKGTIHIFSL 77 Score = 35.0 bits (79), Expect = 0.064 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Frame = +2 Query: 254 NTGSNASSSLSFMKGILP-----KYFSSERSFAQFHLPEITRYIVAFGAQNTVM-MVGLD 415 N S + ++F+KGILP KY SE SFAQ E + I AF +T + ++ D Sbjct: 193 NNKSMSGMGINFLKGILPSGFVPKYLESEWSFAQVRGIE-GKAICAFSKDSTKLHIICSD 251 Query: 416 GSFYRCIFDQVNGGQMTQKEYSRFLKT 496 G+F + V G+ ++ ++LK+ Sbjct: 252 GNF---VIANVEEGECSRVSTMKYLKS 275
>AK111160: | Length = 909 Score = 46.2 bits (108), Expect = 3e-05 Identities = 22/41 (53%), Positives = 29/41 (70%) Frame = +3 Query: 24 TRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSL 146 T +E+RRG D A I SIA +P+ +A +SDKGT+HIF L Sbjct: 612 TLARELRRGTDPATILSIAFAPDASIVAAASDKGTIHIFLL 652
>AK101857:Os01g0786900 | Length = 916 Score = 36.2 bits (82), Expect = 0.029 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = +3 Query: 30 LQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSL 146 L +++RG+ A I I+ S + +W+ +SS +GT H F++ Sbjct: 470 LYKLQRGITNAVIKDISFSDDSEWIMISSSRGTSHFFAI 508
>AK099795:Os05g0405900 | Length = 664 Score = 36.2 bits (82), Expect = 0.029 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +3 Query: 12 TMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSL 146 T L ++ RG+ A I I+ S QW+++ S +GT HIF+L Sbjct: 83 TASHVHLYKLYRGMTAAVIQDISFSHFSQWISIVSSRGTCHIFTL 127
>AK072244:Os05g0405900 | Length = 1006 Score = 36.2 bits (82), Expect = 0.029 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +3 Query: 12 TMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSL 146 T L ++ RG+ A I I+ S QW+++ S +GT HIF+L Sbjct: 423 TASHVHLYKLYRGMTAAVIQDISFSHFSQWISIVSSRGTCHIFTL 467
>Os02g0263300:Os02g0263300 | Length = 1311 Score = 28.1 bits (61), Expect = 7.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +2 Query: 323 ERSFAQFHLPEITRYIVAFGAQNTVMMVGLDGSF 424 E + +F P + RY+ FG +N V+ + + GSF Sbjct: 965 EEAELRFPSPRLLRYVKIFGYENLVLPMEVGGSF 998
>AK111361:Os01g0799600 | Length = 134 Score = 28.1 bits (61), Expect = 7.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 653 ASAGDARPQPVCLPILLQLSLSRP 724 A AG P P CLP + +SLS P Sbjct: 69 ALAGSTWPDPACLPACVTVSLSHP 92
>AK103686:Os01g0844800 | Length = 1038 Score = 28.1 bits (61), Expect = 7.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 386 QNTVMMVGLDGSFYRCIFDQVNGGQMTQK 472 Q T M+ LDG RC+ DQ NG + QK Sbjct: 804 QKTKMVTELDGHIMRCVRDQ-NGNHVIQK 831
>AK099801:Os01g0844800 | Length = 1060 Score = 28.1 bits (61), Expect = 7.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 386 QNTVMMVGLDGSFYRCIFDQVNGGQMTQK 472 Q T M+ LDG RC+ DQ NG + QK Sbjct: 826 QKTKMVTELDGHIMRCVRDQ-NGNHVIQK 853
>AK067739:Os01g0971900 | Length = 894 Score = 28.1 bits (61), Expect = 7.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 386 QNTVMMVGLDGSFYRCIFDQVNGGQMTQK 472 Q T M+ LDG RC+ DQ NG + QK Sbjct: 660 QQTKMVAELDGQVMRCVRDQ-NGNHVIQK 687 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,052,694 Number of extensions: 591688 Number of successful extensions: 1619 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1616 Number of HSP's successfully gapped: 19 Length of query: 279 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 180 Effective length of database: 11,435,796 Effective search space: 2058443280 Effective search space used: 2058443280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
