ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf118a06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067489.1| Oryza sativa (japonica cultivar-group) Os08g0137200 (Os08g0137200) mRNA, complete cds Length = 1960 Score = 1481 bits (747), Expect = 0.0 Identities = 1191/1339 (88%) Strand = Plus / Plus Query: 111 ccagccatgtacggcggcgacgaggtctcggcgatcgtcatcgacgtgggctcctacagc 170 |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 108 ccagccatgtacggcggcgatgaggtctcggccatcgtcatcgacgtggggtcctacagc 167 Query: 171 tgcaaggcgggctacgctggcgacgacacccccaaatgcgtcttcccctcggttgttggt 230 ||||||||||| ||||| || || ||||||||||| |||||||||||||||||||||| Sbjct: 168 tgcaaggcggggtacgccggtgatgacacccccaaggccgtcttcccctcggttgttggt 227 Query: 231 tcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggccgactctgga 290 |||||||| ||||||||||| |||||||||| || |||| |||||||| || ||| | Sbjct: 228 tcaattgagcaaacgggagaaactgatgaagcaaaggcagacaaggaggctgaagctgca 287 Query: 291 tcagatcctaagaatggatccaagcctatggatgtggacaaagccaagacaaagcgcaaa 350 |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 288 tcagattctaagaatggagccaaacctatggatgtggacaaagccaagacaaagcgcaaa 347 Query: 351 ttttatctaggccaagaattagaattcaggagggatcatatggaggtgatctcaccgatg 410 || ||| | || |||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 348 ttgtatgttggtcaagaattggagttcaggagggatcatatggaggtgatttcaccaatg 407 Query: 411 aaagatggaacagttactgattgggaagttgttgacaacatatggaatcatgcttttaga 470 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || Sbjct: 408 aaagatggaacagttactgattgggatattgttgacaatatatggaatcatgctttcagg 467 Query: 471 cggcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaac 530 | ||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 468 cagcggctattgatcaatcctgaggagcatcctatgttgatagctgaaccatctacaaac 527 Query: 531 agtggacaacaaagagagaaagcagcagaagttatgtttgagaagtacaaagtgccagcg 590 | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 528 acaggacagcaaagagagaaagcagcagaacttatgtttgagaagtacaaagtgccggca 587 Query: 591 ctgttcctagcaaaaaatgcagttctcacatcttttgcatctggacgtgctacgtctctg 650 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 588 ctgttcctagcgaaaaatgcagttctcacatcttttgcatctggacgtgctacatcgttg 647 Query: 651 gtggttgactgtggtggcgggtctactgtggtttctgctgtgcatgatggttatgtgttg 710 || |||||| | ||||| ||||||||||||||| ||||||| || ||||||||||| ||| Sbjct: 648 gtagttgacagcggtggtgggtctactgtggttgctgctgttcacgatggttatgtattg 707 Query: 711 caaaagtctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaa 770 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 708 caaaagtctgtggcgacttctccaattggtggtgaatttttaactgactgtatgatgaaa 767 Query: 771 agcttggagagcaagggcgttgttattaggcccaagtattcatttaagaagaaggaagtg 830 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 768 agcttggagagcaagggcgttgttataaggcccaggtattcattcaagaagaaggaagtc 827 Query: 831 agccctggagattataaggttgtagatcttgattttccgaacacgaccgagagttacagg 890 ||||||| || ||||||||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 828 ggccctggcgaatataaggttgtagatcttgatcttccaaacacaacggagagttacaag 887 Query: 891 ttatactgcatgagagccatcgctggcgacatcaaagagtcagtttgcagagttccagat 950 ||||||||||||||||| || ||| | || ||||| |||||||||||||| ||||||||| Sbjct: 888 ttatactgcatgagagctattgctagtgatatcaaggagtcagtttgcagggttccagat 947 Query: 951 accccctttgatgaagtggcatatgcaaatgttcctacaacttcatatgagcttccagat 1010 || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 948 actgccttcgatgaagtggcatatgcaaacgttcctacaacttcatatgagcttccagat 1007 Query: 1011 gggcaaactattgaagttggtgcagatagatttaagatccctgacattttgttcaaccca 1070 || ||||| ||||||||||||||||| ||||| ||||| ||||| ||| |||| || ||| Sbjct: 1008 ggacaaaccattgaagttggtgcagacagattcaagattcctgatattctgtttaatcca 1067 Query: 1071 tatctttcccagactattcctggagtcgatggatttggagattccacttcaattcgtgga 1130 | |||||| ||||||||||||||||| |||||||||| |||||| | ||| ||||||| Sbjct: 1068 tctctttctcagactattcctggagttgatggatttgcagattcaatgtcagttcgtggc 1127 Query: 1131 cttccacgaatggtccttgacagtataaacagatgtgatgttgatattcgcaaggaacta 1190 ||||||||||||||| |||| ||| |||| || || |||||||| |||||||||||||| Sbjct: 1128 cttccacgaatggtcattgatagtgtaaataggtgcgatgttgacattcgcaaggaactg 1187 Query: 1191 ctcagcaacatcttgctttctggtggctcgtcatcaattctgcagttaaaggagcgccta 1250 || |||| || ||||||| ||||| || ||||||||||||||||| |||||| | ||| Sbjct: 1188 ctaagcagtattctgctttcaggtggttcatcatcaattctgcagttgaaggagaggcta 1247 Query: 1251 gaaaaagaagtactggaggagtcccctcaaaatgctcgcataaaggttttggcaagtgga 1310 |||||||||||||| ||||| || || ||| |||| |||||||||||||||||||| Sbjct: 1248 gaaaaagaagtacttgaggaatcttctggtaatactcgtgtaaaggttttggcaagtgga 1307 Query: 1311 agttcaatggagaggcgtttcagtgtttggattggagggagcattcttgcatctctcggg 1370 | |||| | |||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 1308 aattcagtagagaggcgattcagtgtttggattggagggagcattctagcatcccttggg 1367 Query: 1371 tcgttccagcaaatgtggttctccaaagcagagtacgaggagcatggcgtttcttatatc 1430 |||||||||||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 1368 tcgttccagcaaatgtggttctccaaagcagaatacgaagaacatggagtatcctacatc 1427 Query: 1431 cagaggaaatgcccatgaa 1449 || ||||| |||||||||| Sbjct: 1428 caaaggaagtgcccatgaa 1446
>dbj|AK101582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050O03, full insert sequence Length = 1760 Score = 1481 bits (747), Expect = 0.0 Identities = 1191/1339 (88%) Strand = Plus / Plus Query: 111 ccagccatgtacggcggcgacgaggtctcggcgatcgtcatcgacgtgggctcctacagc 170 |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 109 ccagccatgtacggcggcgatgaggtctcggccatcgtcatcgacgtggggtcctacagc 168 Query: 171 tgcaaggcgggctacgctggcgacgacacccccaaatgcgtcttcccctcggttgttggt 230 ||||||||||| ||||| || || ||||||||||| |||||||||||||||||||||| Sbjct: 169 tgcaaggcggggtacgccggtgatgacacccccaaggccgtcttcccctcggttgttggt 228 Query: 231 tcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggccgactctgga 290 |||||||| ||||||||||| |||||||||| || |||| |||||||| || ||| | Sbjct: 229 tcaattgagcaaacgggagaaactgatgaagcaaaggcagacaaggaggctgaagctgca 288 Query: 291 tcagatcctaagaatggatccaagcctatggatgtggacaaagccaagacaaagcgcaaa 350 |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 289 tcagattctaagaatggagccaaacctatggatgtggacaaagccaagacaaagcgcaaa 348 Query: 351 ttttatctaggccaagaattagaattcaggagggatcatatggaggtgatctcaccgatg 410 || ||| | || |||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 349 ttgtatgttggtcaagaattggagttcaggagggatcatatggaggtgatttcaccaatg 408 Query: 411 aaagatggaacagttactgattgggaagttgttgacaacatatggaatcatgcttttaga 470 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || Sbjct: 409 aaagatggaacagttactgattgggatattgttgacaatatatggaatcatgctttcagg 468 Query: 471 cggcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaac 530 | ||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 469 cagcggctattgatcaatcctgaggagcatcctatgttgatagctgaaccatctacaaac 528 Query: 531 agtggacaacaaagagagaaagcagcagaagttatgtttgagaagtacaaagtgccagcg 590 | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 529 acaggacagcaaagagagaaagcagcagaacttatgtttgagaagtacaaagtgccggca 588 Query: 591 ctgttcctagcaaaaaatgcagttctcacatcttttgcatctggacgtgctacgtctctg 650 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 589 ctgttcctagcgaaaaatgcagttctcacatcttttgcatctggacgtgctacatcgttg 648 Query: 651 gtggttgactgtggtggcgggtctactgtggtttctgctgtgcatgatggttatgtgttg 710 || |||||| | ||||| ||||||||||||||| ||||||| || ||||||||||| ||| Sbjct: 649 gtagttgacagcggtggtgggtctactgtggttgctgctgttcacgatggttatgtattg 708 Query: 711 caaaagtctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaa 770 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 709 caaaagtctgtggcgacttctccaattggtggtgaatttttaactgactgtatgatgaaa 768 Query: 771 agcttggagagcaagggcgttgttattaggcccaagtattcatttaagaagaaggaagtg 830 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 769 agcttggagagcaagggcgttgttataaggcccaggtattcattcaagaagaaggaagtc 828 Query: 831 agccctggagattataaggttgtagatcttgattttccgaacacgaccgagagttacagg 890 ||||||| || ||||||||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 829 ggccctggcgaatataaggttgtagatcttgatcttccaaacacaacggagagttacaag 888 Query: 891 ttatactgcatgagagccatcgctggcgacatcaaagagtcagtttgcagagttccagat 950 ||||||||||||||||| || ||| | || ||||| |||||||||||||| ||||||||| Sbjct: 889 ttatactgcatgagagctattgctagtgatatcaaggagtcagtttgcagggttccagat 948 Query: 951 accccctttgatgaagtggcatatgcaaatgttcctacaacttcatatgagcttccagat 1010 || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 949 actgccttcgatgaagtggcatatgcaaacgttcctacaacttcatatgagcttccagat 1008 Query: 1011 gggcaaactattgaagttggtgcagatagatttaagatccctgacattttgttcaaccca 1070 || ||||| ||||||||||||||||| ||||| ||||| ||||| ||| |||| || ||| Sbjct: 1009 ggacaaaccattgaagttggtgcagacagattcaagattcctgatattctgtttaatcca 1068 Query: 1071 tatctttcccagactattcctggagtcgatggatttggagattccacttcaattcgtgga 1130 | |||||| ||||||||||||||||| |||||||||| |||||| | ||| ||||||| Sbjct: 1069 tctctttctcagactattcctggagttgatggatttgcagattcaatgtcagttcgtggc 1128 Query: 1131 cttccacgaatggtccttgacagtataaacagatgtgatgttgatattcgcaaggaacta 1190 ||||||||||||||| |||| ||| |||| || || |||||||| |||||||||||||| Sbjct: 1129 cttccacgaatggtcattgatagtgtaaataggtgcgatgttgacattcgcaaggaactg 1188 Query: 1191 ctcagcaacatcttgctttctggtggctcgtcatcaattctgcagttaaaggagcgccta 1250 || |||| || ||||||| ||||| || ||||||||||||||||| |||||| | ||| Sbjct: 1189 ctaagcagtattctgctttcaggtggttcatcatcaattctgcagttgaaggagaggcta 1248 Query: 1251 gaaaaagaagtactggaggagtcccctcaaaatgctcgcataaaggttttggcaagtgga 1310 |||||||||||||| ||||| || || ||| |||| |||||||||||||||||||| Sbjct: 1249 gaaaaagaagtacttgaggaatcttctggtaatactcgtgtaaaggttttggcaagtgga 1308 Query: 1311 agttcaatggagaggcgtttcagtgtttggattggagggagcattcttgcatctctcggg 1370 | |||| | |||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 1309 aattcagtagagaggcgattcagtgtttggattggagggagcattctagcatcccttggg 1368 Query: 1371 tcgttccagcaaatgtggttctccaaagcagagtacgaggagcatggcgtttcttatatc 1430 |||||||||||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 1369 tcgttccagcaaatgtggttctccaaagcagaatacgaagaacatggagtatcctacatc 1428 Query: 1431 cagaggaaatgcccatgaa 1449 || ||||| |||||||||| Sbjct: 1429 caaaggaagtgcccatgaa 1447
>dbj|AK065561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033I11, full insert sequence Length = 1961 Score = 1473 bits (743), Expect = 0.0 Identities = 1190/1339 (88%) Strand = Plus / Plus Query: 111 ccagccatgtacggcggcgacgaggtctcggcgatcgtcatcgacgtgggctcctacagc 170 |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 109 ccagccatgtacggcggcgatgaggtctcggccatcgtcatcgacgtggggtcctacagc 168 Query: 171 tgcaaggcgggctacgctggcgacgacacccccaaatgcgtcttcccctcggttgttggt 230 ||||||||||| ||||| || || ||||||||||| |||||||||||||||||||||| Sbjct: 169 tgcaaggcggggtacgccggtgatgacacccccaaggccgtcttcccctcggttgttggt 228 Query: 231 tcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggccgactctgga 290 |||||||| ||||||||||| |||||||||| || |||| |||||||| || ||| | Sbjct: 229 tcaattgagcaaacgggagaaactgatgaagcaaaggcagacaaggaggctgaagctgca 288 Query: 291 tcagatcctaagaatggatccaagcctatggatgtggacaaagccaagacaaagcgcaaa 350 |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 289 tcagattctaagaatggagccaaacctatggatgtggacaaagccaagacaaagcgcaaa 348 Query: 351 ttttatctaggccaagaattagaattcaggagggatcatatggaggtgatctcaccgatg 410 || ||| | || |||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 349 ttgtatgttggtcaagaattggagttcaggagggatcatatggaggtgatttcaccaatg 408 Query: 411 aaagatggaacagttactgattgggaagttgttgacaacatatggaatcatgcttttaga 470 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || Sbjct: 409 aaagatggaacagttactgattgggatattgttgacaatatatggaatcatgctttcagg 468 Query: 471 cggcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaac 530 | ||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 469 cagcggctattgatcaatcctgaggagcatcctatgttgatagctgaaccatctacaaac 528 Query: 531 agtggacaacaaagagagaaagcagcagaagttatgtttgagaagtacaaagtgccagcg 590 | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 529 acaggacagcaaagagagaaagcagcagaacttatgtttgagaagtacaaagtgccggca 588 Query: 591 ctgttcctagcaaaaaatgcagttctcacatcttttgcatctggacgtgctacgtctctg 650 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 589 ctgttcctagcgaaaaatgcagttctcacatcttttgcatctggacgtgctacatcgttg 648 Query: 651 gtggttgactgtggtggcgggtctactgtggtttctgctgtgcatgatggttatgtgttg 710 || |||||| | ||||| ||||||||||||||| ||||||| || ||||||||||| ||| Sbjct: 649 gtagttgacagcggtggtgggtctactgtggttgctgctgttcacgatggttatgtattg 708 Query: 711 caaaagtctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaa 770 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 709 caaaagtctgtggcgacttctccaattggtggtgaatttttaactgactgtatgatgaaa 768 Query: 771 agcttggagagcaagggcgttgttattaggcccaagtattcatttaagaagaaggaagtg 830 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 769 agcttggagagcaagggcgttgttataaggcccaggtattcattcaagaagaaggaagtc 828 Query: 831 agccctggagattataaggttgtagatcttgattttccgaacacgaccgagagttacagg 890 ||||||| || ||||||||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 829 ggccctggcgaatataaggttgtagatcttgatcttccaaacacaacggagagttacaag 888 Query: 891 ttatactgcatgagagccatcgctggcgacatcaaagagtcagtttgcagagttccagat 950 ||||||||||||||||| || ||| | || ||||| |||||||||||||| ||||||||| Sbjct: 889 ttatactgcatgagagctattgctagtgatatcaaggagtcagtttgcagggttccagat 948 Query: 951 accccctttgatgaagtggcatatgcaaatgttcctacaacttcatatgagcttccagat 1010 || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 949 actgccttcgatgaagtggcatatgcaaacgttcctacaacttcatatgagcttccagat 1008 Query: 1011 gggcaaactattgaagttggtgcagatagatttaagatccctgacattttgttcaaccca 1070 || ||||| ||||||||||||||||| ||||| ||||| ||||| ||| |||| || ||| Sbjct: 1009 ggacaaaccattgaagttggtgcagacagattcaagattcctgatattctgtttaatcca 1068 Query: 1071 tatctttcccagactattcctggagtcgatggatttggagattccacttcaattcgtgga 1130 | |||||| ||||||||||||||||| |||||||||| |||||| | ||| ||||||| Sbjct: 1069 tctctttctcagactattcctggagttgatggatttgcagattcaatgtcagttcgtggc 1128 Query: 1131 cttccacgaatggtccttgacagtataaacagatgtgatgttgatattcgcaaggaacta 1190 ||||||||||||||| |||| | | |||| || || |||||||| |||||||||||||| Sbjct: 1129 cttccacgaatggtcattgatattgtaaataggtgcgatgttgacattcgcaaggaactg 1188 Query: 1191 ctcagcaacatcttgctttctggtggctcgtcatcaattctgcagttaaaggagcgccta 1250 || |||| || ||||||| ||||| || ||||||||||||||||| |||||| | ||| Sbjct: 1189 ctaagcagtattctgctttcaggtggttcatcatcaattctgcagttgaaggagaggcta 1248 Query: 1251 gaaaaagaagtactggaggagtcccctcaaaatgctcgcataaaggttttggcaagtgga 1310 |||||||||||||| ||||| || || ||| |||| |||||||||||||||||||| Sbjct: 1249 gaaaaagaagtacttgaggaatcttctggtaatactcgtgtaaaggttttggcaagtgga 1308 Query: 1311 agttcaatggagaggcgtttcagtgtttggattggagggagcattcttgcatctctcggg 1370 | |||| | |||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 1309 aattcagtagagaggcgattcagtgtttggattggagggagcattctagcatcccttggg 1368 Query: 1371 tcgttccagcaaatgtggttctccaaagcagagtacgaggagcatggcgtttcttatatc 1430 |||||||||||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 1369 tcgttccagcaaatgtggttctccaaagcagaatacgaagaacatggagtatcctacatc 1428 Query: 1431 cagaggaaatgcccatgaa 1449 || ||||| |||||||||| Sbjct: 1429 caaaggaagtgcccatgaa 1447
>gb|AY104978.1| Zea mays PCO093035 mRNA sequence Length = 1846 Score = 1263 bits (637), Expect = 0.0 Identities = 1168/1345 (86%) Strand = Plus / Plus Query: 105 ggatctccagccatgtacggcggcgacgaggtctcggcgatcgtcatcgacgtgggctcc 164 ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||||| Sbjct: 138 ggatctccagccatgtacggcggagacgaggtttcggcaatcgtcatagatgtgggctct 197 Query: 165 tacagctgcaaggcgggctacgctggcgacgacacccccaaatgcgtcttcccctcggtt 224 ||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| Sbjct: 198 tacagctgcaaggcgggctacgcaggcgacgacacccccaaggccgtcttcccatcggtt 257 Query: 225 gttggttcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggccgac 284 |||||||||||||||||||| | ||| | ||||| | || ||||| ||||| || ||| Sbjct: 258 gttggttcaattgaacaaactgaagacacagatgaccccaagccagagaaggaagctgac 317 Query: 285 tctggatcagatcctaagaatggatccaagcctatggatgtggacaaagccaagacaaag 344 |||| ||||||| ||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 318 tctgcatcagattctaagaacggtgccaagcccatggatgtggacaaagccaagacaaaa 377 Query: 345 cgcaaattttatctaggccaagaattagaattcaggagggatcatatggaggtgatctca 404 |||| | ||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 378 cgcagactttatgtaggccaagagttagagttcaggagggatcacatggaggtgatttca 437 Query: 405 ccgatgaaagatggaacagttactgattgggaagttgttgacaacatatggaatcatgct 464 | |||||||||||||| || ||||| ||||| ||||||| || ||||||||||||||| Sbjct: 438 tctatgaaagatggaacggtaactgactgggatattgttgataatatatggaatcatgct 497 Query: 465 tttagacggcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttct 524 || |||||| || | ||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 498 ttcagacggaggttgttgatcaatcctgaagagcatcctatgctcattgctgaaccatct 557 Query: 525 acaaacagtggacaacaaagagagaaagcagcagaagttatgtttgagaagtacaaagtg 584 ||||||| || ||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 558 acaaacactgcacagcaaagagagaaagcagcggaacttatgtttgagaactacaaagtg 617 Query: 585 ccagcgctgttcctagcaaaaaatgcagttctcacatcttttgcatctggacgtgctacg 644 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 618 ccagcgctgtttctagccaaaaatgcagtgctcacatcttttgcgtctggacgagctaca 677 Query: 645 tctctggtggttgactgtggtggcgggtctactgtggtttctgctgtgcatgatggttat 704 ||| ||||||||||| ||||||| ||||||||||||||||||||||| || ||||||| | Sbjct: 678 tctttggtggttgacagtggtggtgggtctactgtggtttctgctgtacacgatggtttt 737 Query: 705 gtgttgcaaaagtctgtggcaacttctccaattggtggtgaatttttaactgattgtatg 764 || || || ||||||||| | ||||||||| |||| ||||||||||||||||| |||||| Sbjct: 738 gttttacagaagtctgtgtcgacttctccagttggcggtgaatttttaactgactgtatg 797 Query: 765 atgaaaagcttggagagcaagggcgttgttattaggcccaagtattcatttaagaagaag 824 |||||||||||||||||||||||| | || |||||||||| |||||||||||||||||| Sbjct: 798 atgaaaagcttggagagcaagggcatcgtcattaggcccagatattcatttaagaagaag 857 Query: 825 gaagtgagccctggagattataaggttgtagatcttgattttccgaacacgaccgagagt 884 ||| | || |||||||| |||||| |||||||||||||| |||| ||||| || |||||| Sbjct: 858 gaaatcagtcctggagaatataagattgtagatcttgatcttccaaacacaactgagagt 917 Query: 885 tacaggttatactgcatgagagccatcgctggcgacatcaaagagtcagtttgcagagtt 944 |||||||| |||||||||||||| || ||| | ||| |||| ||||| |||||||||||| Sbjct: 918 tacaggttgtactgcatgagagctattgctagtgacgtcaaggagtctgtttgcagagtt 977 Query: 945 ccagataccccctttgatgaagtggcatatgcaaatgttcctacaacttcatatgagctt 1004 ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 ccagacactgcttttgatgaagtggcatatgcaaatgttcctacaacttcatatgagctt 1037 Query: 1005 ccagatgggcaaactattgaagttggtgcagatagatttaagatccctgacattttgttc 1064 || ||||| |||||||||||||||||||| |||||||| ||| | ||||| ||| | || Sbjct: 1038 cctgatggacaaactattgaagttggtgctgatagattcaaggttcctgatattctattt 1097 Query: 1065 aacccatatctttcccagactattcctggagtcgatggatttggagattccacttcaatt 1124 || |||| ||| ||||||||||||||||| | |||||||||| |||||| | || | Sbjct: 1098 aatccatctctatcccagactattcctgggattgatggatttgcagattcaataccagtc 1157 Query: 1125 cgtggacttccacgaatggtccttgacagtataaacagatgtgatgttgatattcgcaag 1184 ||||| |||| |||||||||| |||| || |||| | || || ||||| || || || Sbjct: 1158 cgtggccttcaacgaatggtcattgatagcgtaaataagtgcgacgttgacatacgaaaa 1217 Query: 1185 gaactactcagcaacatcttgctttctggtggctcgtcatcaattctgcagttaaaggag 1244 || ||| |||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 1218 gagctattcagtaacatcttgctctctggtgggtcatcatcaattctgcagttaaaggag 1277 Query: 1245 cgcctagaaaaagaagtactggaggagtcccctcaaaatgctcgcataaaggttttggca 1304 ||||| || ||||||||| |||||||||| |||||| |||||| | |||||| ||||| Sbjct: 1278 cgcctggagaaagaagtattggaggagtctcctcaagctgctcgtgtcaaggttatggca 1337 Query: 1305 agtggaagttcaatggagaggcgtttcagtgtttggattggagggagcattcttgcatct 1364 || |||| ||| | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1338 agcggaaactcagtagagagacgtttcagtgtttggattggagggagcattctagcatct 1397 Query: 1365 ctcgggtcgttccagcaaatgtggttctccaaagcagagtacgaggagcatggcgtttct 1424 || |||||||||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 1398 cttgggtcgttccagcagatgtggttctccaaagcagagtatgaagagcatggggtttcc 1457 Query: 1425 tatatccagaggaaatgcccatgaa 1449 ||||| ||||| || ||||| |||| Sbjct: 1458 tatattcagagaaagtgcccttgaa 1482
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 192 bits (97), Expect = 3e-45 Identities = 157/177 (88%) Strand = Plus / Plus Query: 221 ggttgttggttcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggc 280 |||||||||||||||||| ||||||||||| |||||||||| || |||| |||||||| Sbjct: 2079923 ggttgttggttcaattgagcaaacgggagaaactgatgaagcaaaggcagacaaggaggc 2079982 Query: 281 cgactctggatcagatcctaagaatggatccaagcctatggatgtggacaaagccaagac 340 || ||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 2079983 tgaagctgcatcagattctaagaatggagccaaacctatggatgtggacaaagccaagac 2080042 Query: 341 aaagcgcaaattttatctaggccaagaattagaattcaggagggatcatatggaggt 397 |||||||||||| ||| | || |||||||| || ||||||||||||||||||||||| Sbjct: 2080043 aaagcgcaaattgtatgttggtcaagaattggagttcaggagggatcatatggaggt 2080099 Score = 143 bits (72), Expect = 3e-30 Identities = 78/80 (97%) Strand = Plus / Plus Query: 715 agtctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaaagct 774 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2082597 agtctgtggcgacttctccaattggtggtgaatttttaactgactgtatgatgaaaagct 2082656 Query: 775 tggagagcaagggcgttgtt 794 |||||||||||||||||||| Sbjct: 2082657 tggagagcaagggcgttgtt 2082676 Score = 125 bits (63), Expect = 6e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 1331 cagtgtttggattggagggagcattcttgcatctctcgggtcgttccagcaaatgtggtt 1390 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 2086617 cagtgtttggattggagggagcattctagcatcccttgggtcgttccagcaaatgtggtt 2086676 Query: 1391 ctccaaagcagagta 1405 ||||||||||||||| Sbjct: 2086677 ctccaaagcagagta 2086691 Score = 111 bits (56), Expect = 9e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 132 gaggtctcggcgatcgtcatcgacgtgggctcctacagctgcaaggcgggctacgctggc 191 ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2078489 gaggtctcggccatcgtcatcgacgtggggtcctacagctgcaaggcggggtacgccggt 2078548 Query: 192 gacgacacccccaaatgcgtcttcccctcggt 223 || ||||||||||| ||||||||||||||| Sbjct: 2078549 gatgacacccccaaggccgtcttcccctcggt 2078580 Score = 105 bits (53), Expect = 6e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 2080182 aggtgatttcaccaatgaaagatggaacagttactgattgggatattgttgacaatatat 2080241 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 2080242 ggaatcatgcttt 2080254 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 473 gcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaacag 532 ||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||| Sbjct: 2080850 gcggctattgatcaatcctgaggagcatcctatgttgatagctgaaccatctacaaacac 2080909 Query: 533 tggacaacaaagagagaa 550 ||||| ||||||||||| Sbjct: 2080910 aggacagcaaagagagaa 2080927 Score = 93.7 bits (47), Expect = 2e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 551 agcagcagaagttatgtttgagaagtacaaagtgccagcgctgttcctagcaaaaaatgc 610 |||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 2081306 agcagcagaacttatgtttgagaagtacaaagtgccggcactgttcctagcgaaaaatgc 2081365 Query: 611 agt 613 ||| Sbjct: 2081366 agt 2081368 Score = 91.7 bits (46), Expect = 8e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 963 gaagtggcatatgcaaatgttcctacaacttcatatgagcttccagatgg 1012 ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2084228 gaagtggcatatgcaaacgttcctacaacttcatatgagcttccagatgg 2084277 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1205 gctttctggtggctcgtcatcaattctgcagttaaaggagcgcctagaaaaagaagtact 1264 |||||| ||||| || ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 2085751 gctttcaggtggttcatcatcaattctgcagttgaaggagaggctagaaaaagaagtact 2085810 Query: 1265 ggagg 1269 |||| Sbjct: 2085811 tgagg 2085815 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 847 aggttgtagatcttgattttccgaacacgaccgagagttacaggttatactgcatg 902 ||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||| Sbjct: 2083701 aggttgtagatcttgatcttccaaacacaacggagagttacaagttatactgcatg 2083756 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1081 agactattcctggagtcgatggatttggagattccacttcaattcgtggacttccacgaa 1140 |||||||||||||||| |||||||||| |||||| | ||| ||||||| |||||||||| Sbjct: 2085391 agactattcctggagttgatggatttgcagattcaatgtcagttcgtggccttccacgaa 2085450 Query: 1141 tggt 1144 |||| Sbjct: 2085451 tggt 2085454 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 663 ggtggcgggtctactgtggtttctgctgtgcatgatggttatgtgttgcaaaag 716 ||||| ||||||||||||||| ||||||| || ||||||||||| ||||||||| Sbjct: 2082279 ggtggtgggtctactgtggttgctgctgttcacgatggttatgtattgcaaaag 2082332 Score = 63.9 bits (32), Expect = 2e-06 Identities = 32/32 (100%) Strand = Plus / Plus Query: 612 gttctcacatcttttgcatctggacgtgctac 643 |||||||||||||||||||||||||||||||| Sbjct: 2081437 gttctcacatcttttgcatctggacgtgctac 2081468 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 798 aggcccaagtattcatttaagaagaaggaagtgagccctggagattataaggt 850 ||||||| ||||||||| |||||||||||||| ||||||| || |||||||| Sbjct: 2082760 aggcccaggtattcattcaagaagaaggaagtcggccctggcgaatataaggt 2082812 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1020 attgaagttggtgcagatagatttaagatccctgacattttgttcaacccatatctttc 1078 ||||||||||||||||| ||||| ||||| ||||| ||| |||| || |||| |||||| Sbjct: 2085122 attgaagttggtgcagacagattcaagattcctgatattctgtttaatccatctctttc 2085180 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1291 taaaggttttggcaagtggaagttcaatggagaggcgtttcag 1333 ||||||||||||||||||||| |||| | |||||||| ||||| Sbjct: 2086359 taaaggttttggcaagtggaaattcagtagagaggcgattcag 2086401 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 921 atcaaagagtcagtttgcagagttccagatac 952 ||||| |||||||||||||| ||||||||||| Sbjct: 2083864 atcaaggagtcagtttgcagggttccagatac 2083895
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 192 bits (97), Expect = 3e-45 Identities = 157/177 (88%) Strand = Plus / Plus Query: 221 ggttgttggttcaattgaacaaacgggagatgctgatgaagctaaaccagaaaaggaggc 280 |||||||||||||||||| ||||||||||| |||||||||| || |||| |||||||| Sbjct: 73453 ggttgttggttcaattgagcaaacgggagaaactgatgaagcaaaggcagacaaggaggc 73512 Query: 281 cgactctggatcagatcctaagaatggatccaagcctatggatgtggacaaagccaagac 340 || ||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 73513 tgaagctgcatcagattctaagaatggagccaaacctatggatgtggacaaagccaagac 73572 Query: 341 aaagcgcaaattttatctaggccaagaattagaattcaggagggatcatatggaggt 397 |||||||||||| ||| | || |||||||| || ||||||||||||||||||||||| Sbjct: 73573 aaagcgcaaattgtatgttggtcaagaattggagttcaggagggatcatatggaggt 73629 Score = 143 bits (72), Expect = 3e-30 Identities = 78/80 (97%) Strand = Plus / Plus Query: 715 agtctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaaagct 774 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76127 agtctgtggcgacttctccaattggtggtgaatttttaactgactgtatgatgaaaagct 76186 Query: 775 tggagagcaagggcgttgtt 794 |||||||||||||||||||| Sbjct: 76187 tggagagcaagggcgttgtt 76206 Score = 125 bits (63), Expect = 6e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 1331 cagtgtttggattggagggagcattcttgcatctctcgggtcgttccagcaaatgtggtt 1390 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 80147 cagtgtttggattggagggagcattctagcatcccttgggtcgttccagcaaatgtggtt 80206 Query: 1391 ctccaaagcagagta 1405 ||||||||||||||| Sbjct: 80207 ctccaaagcagagta 80221 Score = 111 bits (56), Expect = 9e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 132 gaggtctcggcgatcgtcatcgacgtgggctcctacagctgcaaggcgggctacgctggc 191 ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 72019 gaggtctcggccatcgtcatcgacgtggggtcctacagctgcaaggcggggtacgccggt 72078 Query: 192 gacgacacccccaaatgcgtcttcccctcggt 223 || ||||||||||| ||||||||||||||| Sbjct: 72079 gatgacacccccaaggccgtcttcccctcggt 72110 Score = 105 bits (53), Expect = 6e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 73712 aggtgatttcaccaatgaaagatggaacagttactgattgggatattgttgacaatatat 73771 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 73772 ggaatcatgcttt 73784 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 473 gcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaacag 532 ||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||| Sbjct: 74380 gcggctattgatcaatcctgaggagcatcctatgttgatagctgaaccatctacaaacac 74439 Query: 533 tggacaacaaagagagaa 550 ||||| ||||||||||| Sbjct: 74440 aggacagcaaagagagaa 74457 Score = 93.7 bits (47), Expect = 2e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 551 agcagcagaagttatgtttgagaagtacaaagtgccagcgctgttcctagcaaaaaatgc 610 |||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 74836 agcagcagaacttatgtttgagaagtacaaagtgccggcactgttcctagcgaaaaatgc 74895 Query: 611 agt 613 ||| Sbjct: 74896 agt 74898 Score = 91.7 bits (46), Expect = 8e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 963 gaagtggcatatgcaaatgttcctacaacttcatatgagcttccagatgg 1012 ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 77758 gaagtggcatatgcaaacgttcctacaacttcatatgagcttccagatgg 77807 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1205 gctttctggtggctcgtcatcaattctgcagttaaaggagcgcctagaaaaagaagtact 1264 |||||| ||||| || ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 79281 gctttcaggtggttcatcatcaattctgcagttgaaggagaggctagaaaaagaagtact 79340 Query: 1265 ggagg 1269 |||| Sbjct: 79341 tgagg 79345 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 847 aggttgtagatcttgattttccgaacacgaccgagagttacaggttatactgcatg 902 ||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||| Sbjct: 77231 aggttgtagatcttgatcttccaaacacaacggagagttacaagttatactgcatg 77286 Score = 71.9 bits (36), Expect = 8e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1081 agactattcctggagtcgatggatttggagattccacttcaattcgtggacttccacgaa 1140 |||||||||||||||| |||||||||| |||||| | ||| ||||||| |||||||||| Sbjct: 78921 agactattcctggagttgatggatttgcagattcaatgtcagttcgtggccttccacgaa 78980 Query: 1141 tggt 1144 |||| Sbjct: 78981 tggt 78984 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 663 ggtggcgggtctactgtggtttctgctgtgcatgatggttatgtgttgcaaaag 716 ||||| ||||||||||||||| ||||||| || ||||||||||| ||||||||| Sbjct: 75809 ggtggtgggtctactgtggttgctgctgttcacgatggttatgtattgcaaaag 75862 Score = 63.9 bits (32), Expect = 2e-06 Identities = 32/32 (100%) Strand = Plus / Plus Query: 612 gttctcacatcttttgcatctggacgtgctac 643 |||||||||||||||||||||||||||||||| Sbjct: 74967 gttctcacatcttttgcatctggacgtgctac 74998 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 798 aggcccaagtattcatttaagaagaaggaagtgagccctggagattataaggt 850 ||||||| ||||||||| |||||||||||||| ||||||| || |||||||| Sbjct: 76290 aggcccaggtattcattcaagaagaaggaagtcggccctggcgaatataaggt 76342 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1020 attgaagttggtgcagatagatttaagatccctgacattttgttcaacccatatctttc 1078 ||||||||||||||||| ||||| ||||| ||||| ||| |||| || |||| |||||| Sbjct: 78652 attgaagttggtgcagacagattcaagattcctgatattctgtttaatccatctctttc 78710 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1291 taaaggttttggcaagtggaagttcaatggagaggcgtttcag 1333 ||||||||||||||||||||| |||| | |||||||| ||||| Sbjct: 79889 taaaggttttggcaagtggaaattcagtagagaggcgattcag 79931 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 921 atcaaagagtcagtttgcagagttccagatac 952 ||||| |||||||||||||| ||||||||||| Sbjct: 77394 atcaaggagtcagtttgcagggttccagatac 77425
>ref|NM_001059171.1| Oryza sativa (japonica cultivar-group) Os04g0389600 (Os04g0389600) mRNA, complete cds Length = 2408 Score = 161 bits (81), Expect = 1e-35 Identities = 138/157 (87%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 902 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 961 Query: 454 ggaatcatgcttttagacggcggctattgatcaatcctgaagagcatcctatgctgatag 513 ||||||||||||| || | ||||||||||||||||||||| |||||||||||| |||||| Sbjct: 962 ggaatcatgctttcaggcagcggctattgatcaatcctgaggagcatcctatgttgatag 1021 Query: 514 cagaaccttctacaaacagtggacaacaaagagagaa 550 ||||| |||||||||| || || ||||||||||| Sbjct: 1022 ttgaaccatctacaaacacagggcagcaaagagagaa 1058
>dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063A05, full insert sequence Length = 2407 Score = 153 bits (77), Expect = 3e-33 Identities = 137/157 (87%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 901 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 960 Query: 454 ggaatcatgcttttagacggcggctattgatcaatcctgaagagcatcctatgctgatag 513 ||||||||||||| | | ||||||||||||||||||||| |||||||||||| |||||| Sbjct: 961 ggaatcatgctttcaagcagcggctattgatcaatcctgaggagcatcctatgttgatag 1020 Query: 514 cagaaccttctacaaacagtggacaacaaagagagaa 550 ||||| |||||||||| || || ||||||||||| Sbjct: 1021 ttgaaccatctacaaacacagggcagcaaagagagaa 1057
>emb|CT828224.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128E07, full insert sequence Length = 1119 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 383 ggatcatatggaggtgatctcaccgatgaaagatggaacagttactgattgggaagttgt 442 |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 705 ggatcatatggaggtgatttcaccaatgaaagatggaacaattactgattgggatattgt 764 Query: 443 tgacaacatatggaatcatgcttttagacggcggctattgatcaatcctg 492 |||||| ||||||||||||||||| || | |||||||||||||||||||| Sbjct: 765 tgacaatatatggaatcatgctttcaggcagcggctattgatcaatcctg 814
>emb|CT828223.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104C23, full insert sequence Length = 1054 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 383 ggatcatatggaggtgatctcaccgatgaaagatggaacagttactgattgggaagttgt 442 |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 640 ggatcatatggaggtgatttcaccaatgaaagatggaacaattactgattgggatattgt 699 Query: 443 tgacaacatatggaatcatgcttttagacggcggctattgatcaatcctg 492 |||||| ||||||||||||||||| || | |||||||||||||||||||| Sbjct: 700 tgacaatatatggaatcatgctttcaggcagcggctattgatcaatcctg 749
>emb|CT828222.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104A11, full insert sequence Length = 1054 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 383 ggatcatatggaggtgatctcaccgatgaaagatggaacagttactgattgggaagttgt 442 |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 640 ggatcatatggaggtgatttcaccaatgaaagatggaacaattactgattgggatattgt 699 Query: 443 tgacaacatatggaatcatgcttttagacggcggctattgatcaatcctg 492 |||||| ||||||||||||||||| || | |||||||||||||||||||| Sbjct: 700 tgacaatatatggaatcatgctttcaggcagcggctattgatcaatcctg 749
>ref|NM_001066030.1| Oryza sativa (japonica cultivar-group) Os07g0432800 (Os07g0432800) mRNA, partial cds Length = 2142 Score = 117 bits (59), Expect = 1e-22 Identities = 80/87 (91%) Strand = Plus / Plus Query: 380 gagggatcatatggaggtgatctcaccgatgaaagatggaacagttactgattgggaagt 439 ||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| | Sbjct: 755 gagggatcatatggaggtgatttcaccaatgaaagatggaacatttattgattgggatat 814 Query: 440 tgttgacaacatatggaatcatgcttt 466 ||||||||| ||||||||||||||||| Sbjct: 815 tgttgacaatatatggaatcatgcttt 841 Score = 50.1 bits (25), Expect = 0.029 Identities = 52/61 (85%) Strand = Plus / Plus Query: 490 ctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagagaga 549 |||| |||||||||||| |||||| ||||| |||||||||| || || |||||||||| Sbjct: 1342 ctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagagaga 1401 Query: 550 a 550 | Sbjct: 1402 a 1402
>dbj|AK063456.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G07, full insert sequence Length = 2142 Score = 117 bits (59), Expect = 1e-22 Identities = 80/87 (91%) Strand = Plus / Plus Query: 380 gagggatcatatggaggtgatctcaccgatgaaagatggaacagttactgattgggaagt 439 ||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| | Sbjct: 755 gagggatcatatggaggtgatttcaccaatgaaagatggaacatttattgattgggatat 814 Query: 440 tgttgacaacatatggaatcatgcttt 466 ||||||||| ||||||||||||||||| Sbjct: 815 tgttgacaatatatggaatcatgcttt 841 Score = 50.1 bits (25), Expect = 0.029 Identities = 52/61 (85%) Strand = Plus / Plus Query: 490 ctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagagaga 549 |||| |||||||||||| |||||| ||||| |||||||||| || || |||||||||| Sbjct: 1342 ctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagagaga 1401 Query: 550 a 550 | Sbjct: 1402 a 1402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 14316227 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 14316168 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 14316167 ggaatcatgcttt 14316155 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 17725128 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 17725187 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 17725188 ggaatcatgcttt 17725200 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 487 atcctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagag 546 ||||||| |||||||||||| |||||| ||||| |||||||||| || || ||||||| Sbjct: 17725698 atcctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagag 17725757 Query: 547 agaa 550 |||| Sbjct: 17725758 agaa 17725761 Score = 50.1 bits (25), Expect = 0.029 Identities = 52/61 (85%) Strand = Plus / Minus Query: 490 ctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagagaga 549 |||| |||||||||||| |||||| ||||| |||||||||| || || |||||||||| Sbjct: 14315654 ctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagagaga 14315595 Query: 550 a 550 | Sbjct: 14315594 a 14315594
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 19170612 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 19170671 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 19170672 ggaatcatgcttt 19170684 Score = 83.8 bits (42), Expect = 2e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 473 gcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaacag 532 ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 19171211 gcggctattgatcaatcctgaggagcatcctatgttgatagttgaaccatctacaaacac 19171270 Query: 533 tggacaacaaagagagaa 550 || || ||||||||||| Sbjct: 19171271 agggcagcaaagagagaa 19171288
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 129161 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 129220 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 129221 ggaatcatgcttt 129233 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 487 atcctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagag 546 ||||||| |||||||||||| |||||| ||||| |||||||||| || || ||||||| Sbjct: 129731 atcctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagag 129790 Query: 547 agaa 550 |||| Sbjct: 129791 agaa 129794
>dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1051_D12 Length = 144262 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 66538 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 66479 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 66478 ggaatcatgcttt 66466 Score = 50.1 bits (25), Expect = 0.029 Identities = 52/61 (85%) Strand = Plus / Minus Query: 490 ctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagagaga 549 |||| |||||||||||| |||||| ||||| |||||||||| || || |||||||||| Sbjct: 65965 ctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagagaga 65906 Query: 550 a 550 | Sbjct: 65905 a 65905
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 29881 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 29940 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 29941 ggaatcatgcttt 29953 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 487 atcctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagag 546 ||||||| |||||||||||| |||||| ||||| |||||||||| || || ||||||| Sbjct: 30451 atcctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagag 30510 Query: 547 agaa 550 |||| Sbjct: 30511 agaa 30514
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 394 aggtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatat 453 ||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||| Sbjct: 104133 aggtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatat 104192 Query: 454 ggaatcatgcttt 466 ||||||||||||| Sbjct: 104193 ggaatcatgcttt 104205 Score = 83.8 bits (42), Expect = 2e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 473 gcggctattgatcaatcctgaagagcatcctatgctgatagcagaaccttctacaaacag 532 ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 104732 gcggctattgatcaatcctgaggagcatcctatgttgatagttgaaccatctacaaacac 104791 Query: 533 tggacaacaaagagagaa 550 || || ||||||||||| Sbjct: 104792 agggcagcaaagagagaa 104809
>ref|NM_001066187.1| Oryza sativa (japonica cultivar-group) Os07g0484700 (Os07g0484700) mRNA, complete cds Length = 2326 Score = 85.7 bits (43), Expect = 5e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 396 gtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatatgg 455 ||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||||| Sbjct: 697 gtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatatgg 756 Query: 456 aatcatgcttt 466 ||||||||||| Sbjct: 757 aatcatgcttt 767 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 487 atcctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagag 546 ||||||| |||||||||||| |||||| ||||| |||||||||| || || ||||||| Sbjct: 1265 atcctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagag 1324 Query: 547 agaa 550 |||| Sbjct: 1325 agaa 1328
>dbj|AK066025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044E03, full insert sequence Length = 2327 Score = 85.7 bits (43), Expect = 5e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 396 gtgatctcaccgatgaaagatggaacagttactgattgggaagttgttgacaacatatgg 455 ||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||| |||||| Sbjct: 698 gtgatttcaccaatgaaagatggaacatttattgattgggatattgttgacaatatatgg 757 Query: 456 aatcatgcttt 466 ||||||||||| Sbjct: 758 aatcatgcttt 768 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 487 atcctgaagagcatcctatgctgatagcagaaccttctacaaacagtggacaacaaagag 546 ||||||| |||||||||||| |||||| ||||| |||||||||| || || ||||||| Sbjct: 1266 atcctgaggagcatcctatgttgatagttgaaccatctacaaacacagggcagcaaagag 1325 Query: 547 agaa 550 |||| Sbjct: 1326 agaa 1329
>emb|CU137663.1| Medicago truncatula chromosome 5 clone mth2-164g23, COMPLETE SEQUENCE Length = 130658 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 718 ctgtggcaacttctccaattggtggtgaatttttaactgattgtatgatgaaaagcttgg 777 ||||||| || ||||||||||| || |||||| | || ||||| ||||||||||||||| Sbjct: 1725 ctgtggcgacgtctccaattggaggagaatttcttacagattgcttgatgaaaagcttgg 1784 Query: 778 agagcaaggg 787 | |||||||| Sbjct: 1785 aaagcaaggg 1794
>gb|AY729844.1| Mallomonas rasilis actin gene, partial cds Length = 891 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1374 ttccagcaaatgtggttctccaaagcagagtacga 1408 ||||||||||||||| ||||||| ||||||||||| Sbjct: 820 ttccagcaaatgtggatctccaaggcagagtacga 854
>gb|AY859055.1| Cucumis melo actin mRNA, partial cds Length = 455 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1331 cagtgtttggattggagggagcattcttgcatctct 1366 ||||||||||||||||||| |||||||||||||| Sbjct: 396 cagtgtttggattggagggtctattcttgcatctct 431
>tpg|BK000424.1| TPA_exp: Arabidopsis thaliana actin-related protein 4a (ARP4a) gene, complete cds Length = 1980 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1374 ttccagcaaatgtggttctccaa 1396 ||||||||||||||||||||||| Sbjct: 1129 ttccagcaaatgtggttctccaa 1151 Score = 46.1 bits (23), Expect = 0.45 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1410 gagcatggcgtttcttatatccagaggaaatgccc 1444 |||||||| | |||||| ||||||||||||||||| Sbjct: 1260 gagcatggagcttcttacatccagaggaaatgccc 1294
>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete sequence Length = 108387 Score = 46.1 bits (23), Expect = 0.45 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1410 gagcatggcgtttcttatatccagaggaaatgccc 1444 |||||||| | |||||| ||||||||||||||||| Sbjct: 82741 gagcatggagcttcttacatccagaggaaatgccc 82707 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1374 ttccagcaaatgtggttctccaa 1396 ||||||||||||||||||||||| Sbjct: 82872 ttccagcaaatgtggttctccaa 82850
>gb|AF030154.1| Bovine adenovirus 3 complete genome Length = 34446 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 774 ttggagagcaagggcgttgttat 796 ||||||||||||||||||||||| Sbjct: 29791 ttggagagcaagggcgttgttat 29769
>dbj|D16839.1|ADRPVIII Bovine adenovirus type 3 pVIII gene, early region 3 and fiber protein gene Length = 5100 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 774 ttggagagcaagggcgttgttat 796 ||||||||||||||||||||||| Sbjct: 3759 ttggagagcaagggcgttgttat 3737
>gb|AC147929.3| Ovis aries clone CH243-200L24, complete sequence Length = 186963 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1561 caccttgctatctggggatgtttattcttg 1590 ||||||||| ||| |||||||||||||||| Sbjct: 129160 caccttgctctcttgggatgtttattcttg 129189
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctgctcgccgagccctccctct 102 |||||||||||||||||||||| Sbjct: 4394971 ctgctcgccgagccctccctct 4394992
>gb|AC098617.5| Homo sapiens BAC clone RP11-56I1 from 2, complete sequence Length = 142812 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 aaaaatgcagttctcacatctt 624 |||||||||||||||||||||| Sbjct: 85125 aaaaatgcagttctcacatctt 85104
>gb|U60493.1|NTU60493 Nicotiana tabacum actin (Tob53) gene, partial cds Length = 1314 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 996 tatgagcttccagatgggcaaa 1017 |||||||||||||||||||||| Sbjct: 827 tatgagcttccagatgggcaaa 848
>gb|AC191834.6| Rhesus Macaque BAC CH250-354M14 () complete sequence Length = 185248 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1475 gatgtagtatgtgggcaactg 1495 ||||||||||||||||||||| Sbjct: 32536 gatgtagtatgtgggcaactg 32516
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ccgctcctgctcgccgagccc 95 ||||||||||||||||||||| Sbjct: 1976071 ccgctcctgctcgccgagccc 1976051
>ref|XM_001121551.1| PREDICTED: Apis mellifera similar to Actin-5C (LOC725739), partial mRNA Length = 390 Score = 42.1 bits (21), Expect = 7.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1372 cgttccagcaaatgtggttctccaaagcagagtacga 1408 ||||||||||||||||| |||| ||| ||||||||| Sbjct: 314 cgttccagcaaatgtggatctcgaaacaagagtacga 350
>gb|AY763398.1| Bolivina sp. isolate 615 clone BO42 actin deviating protein gene, partial cds Length = 1166 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1163 atgtgatgttgatattcgcaaggaa 1187 |||||||||||||||||| |||||| Sbjct: 984 atgtgatgttgatattcgaaaggaa 1008
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccgctcctgctcgccgagccc 95 ||||||||||||||||||||| Sbjct: 3597875 ccgctcctgctcgccgagccc 3597895
>gb|AC145881.4| Pan troglodytes BAC clone RP43-7E18 from chromosome 7, complete sequence Length = 199758 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1475 gatgtagtatgtgggcaactg 1495 ||||||||||||||||||||| Sbjct: 120960 gatgtagtatgtgggcaactg 120940
>gb|AY689436.1| Deerpox virus W-848-83, complete genome Length = 166259 Score = 42.1 bits (21), Expect = 7.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 731 tccaattggtggtgaatttttaactgatt 759 |||||||||||||| ||||||| |||||| Sbjct: 28690 tccaattggtggtgtatttttatctgatt 28662
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1479 tagtatgtgggcaactgcaac 1499 ||||||||||||||||||||| Sbjct: 134231 tagtatgtgggcaactgcaac 134211
>ref|XM_598146.2| PREDICTED: Bos taurus hypothetical LOC519915 (LOC519915), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 7.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1605 agttttgaggcctgctcatcttgtgattg 1633 |||| ||||||||||||||||||| |||| Sbjct: 97 agttctgaggcctgctcatcttgtcattg 69
>ref|NM_145543.1| Mus musculus chloride channel CLIC-like 1 (Clcc1), mRNA gb|BC003247.1| Mus musculus chloride channel CLIC-like 1, mRNA (cDNA clone MGC:7747 IMAGE:3498611), complete cds Length = 2818 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 260 agaagaaggaagtgagccctg 280
>gb|AC133945.2| Mus musculus chromosome 18 clone RP24-146N1, complete sequence Length = 139630 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 acaaagagagaaagcagcaga 559 ||||||||||||||||||||| Sbjct: 63027 acaaagagagaaagcagcaga 63047
>gb|AC005020.5| Homo sapiens BAC clone GS1-259H13 from 7, complete sequence Length = 177531 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1475 gatgtagtatgtgggcaactg 1495 ||||||||||||||||||||| Sbjct: 117594 gatgtagtatgtgggcaactg 117574
>gb|AC116328.3| Mus musculus BAC clone RP24-131I17 from 15, complete sequence Length = 149291 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 gtggacaacaaagagagaaag 552 ||||||||||||||||||||| Sbjct: 93658 gtggacaacaaagagagaaag 93638
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1785 ttagagcatctccaataggcg 1805 ||||||||||||||||||||| Sbjct: 49802 ttagagcatctccaataggcg 49822
>dbj|AK143631.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430004D15 product:Mid-1-related chloride channel 1, full insert sequence Length = 2226 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 415 agaagaaggaagtgagccctg 435
>dbj|AK171296.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630327B22 product:Mid-1-related chloride channel 1, full insert sequence Length = 2064 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 256 agaagaaggaagtgagccctg 276
>dbj|AK169803.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430025N17 product:Mid-1-related chloride channel 1, full insert sequence Length = 2040 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 227 agaagaaggaagtgagccctg 247
>dbj|AK168406.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920011M20 product:hypothetical protein, full insert sequence Length = 2453 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 gaaggaagtgagccctggaga 841 ||||||||||||||||||||| Sbjct: 819 gaaggaagtgagccctggaga 839
>dbj|AK090092.1| Mus musculus Leydig cells CRL-2065 MLTC-1 cDNA, RIKEN full-length enriched library, clone:G430107A16 product:similar to HYPOTHETICAL 61.2 KDA PROTEIN (MID-1-RELATED CHLORIDE CHANNEL 1) [Rattus norvegicus], full insert sequence Length = 2032 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 203 agaagaaggaagtgagccctg 223
>gb|AC016398.6| Homo sapiens chromosome 10 clone RP11-561G1, complete sequence Length = 158817 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 925 aagagtcagtttgcagagttccaga 949 |||||||||||||||||| |||||| Sbjct: 153689 aagagtcagtttgcagagatccaga 153665
>gb|AC025038.6| Homo sapiens chromosome 10 clone RP11-443O13, complete sequence Length = 163132 Score = 42.1 bits (21), Expect = 7.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 925 aagagtcagtttgcagagttccaga 949 |||||||||||||||||| |||||| Sbjct: 139476 aagagtcagtttgcagagatccaga 139500
>gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, complete sequence Length = 95089 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 agttctcacatcttttgcatc 631 ||||||||||||||||||||| Sbjct: 6634 agttctcacatcttttgcatc 6614
>emb|AL357060.31| Human DNA sequence from clone RP11-356I2 on chromosome 6 Contains three novel genes, the TNFAIP3 gene for tumour necrosis factor alpha-induced protein 3 and a CpG island, complete sequence Length = 182209 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 990 acttcatatgagcttccagat 1010 ||||||||||||||||||||| Sbjct: 17952 acttcatatgagcttccagat 17932
>emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in linkage group 15, complete sequence Length = 182283 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 atctcaccgatgaaagatgga 419 ||||||||||||||||||||| Sbjct: 106690 atctcaccgatgaaagatgga 106670
>emb|BX957274.8| Zebrafish DNA sequence from clone DKEY-155F10 in linkage group 9, complete sequence Length = 216817 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 attcatgtgctgatttttaaa 1728 ||||||||||||||||||||| Sbjct: 37000 attcatgtgctgatttttaaa 36980
>ref|XM_625012.1| PREDICTED: Apis mellifera similar to Actin-5C (LOC552637), mRNA Length = 1131 Score = 42.1 bits (21), Expect = 7.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1372 cgttccagcaaatgtggttctccaaagcagagtacga 1408 ||||||||||||||||| |||| ||| ||||||||| Sbjct: 1055 cgttccagcaaatgtggatctcgaaacaagagtacga 1091
>gb|AC113606.3| Homo sapiens BAC clone RP11-84G22 from 4, complete sequence Length = 107356 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 tgattgtatgatgaaaagctt 775 ||||||||||||||||||||| Sbjct: 73823 tgattgtatgatgaaaagctt 73843
>gb|AC011362.2|AC011362 Homo sapiens chromosome 5 clone CTC-503K11, complete sequence Length = 176029 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 agttctcacatcttttgcatc 631 ||||||||||||||||||||| Sbjct: 14135 agttctcacatcttttgcatc 14155
>emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, complete sequence Length = 166576 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 atctcaccgatgaaagatgga 419 ||||||||||||||||||||| Sbjct: 66058 atctcaccgatgaaagatgga 66078
>emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, complete sequence Length = 178077 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 attcatgtgctgatttttaaa 1728 ||||||||||||||||||||| Sbjct: 51971 attcatgtgctgatttttaaa 51991
>ref|NM_022522.2| Rattus norvegicus caspase 2 (Casp2), mRNA gb|U77933.1|RRU77933 Rattus norvegicus Nedd2/Ich-1 mRNA, complete cds Length = 3365 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 tactgtggtttctgctgtgca 694 ||||||||||||||||||||| Sbjct: 2146 tactgtggtttctgctgtgca 2166
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 42.1 bits (21), Expect = 7.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 agaagaaggaagtgagccctg 837 ||||||||||||||||||||| Sbjct: 3675 agaagaaggaagtgagccctg 3695 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 340,305,706 Number of extensions: 17801235 Number of successful extensions: 339132 Number of sequences better than 10.0: 64 Number of HSP's gapped: 339130 Number of HSP's successfully gapped: 113 Length of query: 1842 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1819 Effective length of database: 18,503,978,556 Effective search space: 33658736993364 Effective search space used: 33658736993364 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
