ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf117p03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g63270:12001.t05696:unspliced-genomic alpha-glucan phosphorylase, H isozyme, putative, expressed| Length = 6258 Score = 90.9 bits (192), Expect(2) = 2e-33 Identities = 36/40 (90%), Positives = 38/40 (95%) Frame = +2 / +1 Query: 95 LQDIIFRFKERKPDRVSGKWSEFPSKVAVQMNDTHPTLAI 214 LQDI FRFKERK DRVSGKWSEFP+KVAVQ+NDTHPTLAI Sbjct: 2878 LQDIFFRFKERKADRVSGKWSEFPAKVAVQLNDTHPTLAI 2997 Score = 80.8 bits (170), Expect(2) = 2e-33 Identities = 34/35 (97%), Positives = 34/35 (97%) Frame = +2 / +1 Query: 5 QICAVLYPGDATEEGKLLRLKQQYFLCSASLQDII 109 QICAVLYPGDATEEGKLLRLKQQYFLCSASLQ II Sbjct: 2380 QICAVLYPGDATEEGKLLRLKQQYFLCSASLQVII 2484 Score = 78.5 bits (165), Expect(2) = 4e-26 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = -2 / -2 Query: 108 IIS*RDALQRKYCCFNLRSFPSSVASPG*RTAHIC 4 II+* DALQRKYCCF+LRSFPSSVASPG*RTAHIC Sbjct: 2483 IIT*SDALQRKYCCFSLRSFPSSVASPG*RTAHIC 2379 Score = 68.4 bits (143), Expect(2) = 4e-26 Identities = 32/38 (84%), Positives = 33/38 (86%) Frame = -2 / -2 Query: 213 MARVG*VSFI*TATLEGNSLHFPETLSGFLSLNLKIIS 100 +ARVG*VSF *TAT GNSLHFPETLS FLSLNLK IS Sbjct: 2996 IARVG*VSFN*TATFAGNSLHFPETLSAFLSLNLKKIS 2883 Score = 62.9 bits (131), Expect(2) = 1e-19 Identities = 25/32 (78%), Positives = 28/32 (87%) Frame = -3 / -3 Query: 101 PEGMHCKENTVALISEAFLLL*HHQDREQHIS 6 PE MHCK NTVA + EAFLLL*HH+DRE+HIS Sbjct: 2476 PEAMHCKGNTVASV*EAFLLL*HHRDRERHIS 2381 Score = 62.5 bits (130), Expect(2) = 1e-19 Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = -1 / -1 Query: 208 KSRVSVIHLNSNFGRELTPLP*NSVRFPFLKSENNILK 95 KS VSVI LNSNF RELTP P NSV FPF K E NIL+ Sbjct: 2991 KSWVSVIQLNSNFCRELTPFPRNSVSFPFFKPEKNILQ 2878 Score = 66.1 bits (138), Expect(2) = 1e-19 Identities = 27/38 (71%), Positives = 34/38 (89%) Frame = +1 / +3 Query: 97 SGYYFQI*GKET*QSFREVE*VPFQSCCSNE*HSPDSC 210 +GY+FQ+* KE+*QSF E+E*VP +SCCS E*HSP+SC Sbjct: 2880 AGYFFQV*RKES*QSFWEME*VPCKSCCSIE*HSPNSC 2993 Score = 59.3 bits (123), Expect(2) = 1e-19 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +1 / +3 Query: 1 TTDMCCSLSW*CYRRRKASEIKATVFSLQCIPSG 102 + DMC SLS *CYRRRKAS+ +ATVF LQCI SG Sbjct: 2376 SADMCRSLSR*CYRRRKASQTEATVFPLQCIASG 2477 Score = 62.0 bits (129), Expect(2) = 1e-17 Identities = 28/37 (75%), Positives = 31/37 (83%) Frame = +3 / +2 Query: 99 RILFSDLRKGNLTEFQGSGVSSLPKLLFK*MTLTRLL 209 RI FS L+KG LTEF G+GVSSL KLLF *MTLT+LL Sbjct: 2882 RIFFSGLKKGKLTEFLGNGVSSLQKLLFN*MTLTQLL 2992 Score = 56.5 bits (117), Expect(2) = 1e-17 Identities = 27/32 (84%), Positives = 27/32 (84%) Frame = +3 / +2 Query: 6 RYVLFSILVMLQKKESF*D*SNSIFFAVHPFR 101 RYV FSI VMLQKKESF D*SNSI FAVH FR Sbjct: 2381 RYVPFSIPVMLQKKESFSD*SNSISFAVHRFR 2476 Score = 62.0 bits (129), Expect(2) = 1e-12 Identities = 27/37 (72%), Positives = 29/37 (78%) Frame = -3 / -3 Query: 209 QESGECHSFEQQLWKGTHSTSLKLCQVSFP*I*K*YP 99 QE GECHS EQQL +GTHS S KLCQ+SF * *K YP Sbjct: 2992 QELGECHSIEQQLLQGTHSISQKLCQLSFL*T*KKYP 2882 Score = 39.1 bits (79), Expect(2) = 1e-12 Identities = 19/35 (54%), Positives = 19/35 (54%) Frame = -1 / -1 Query: 109 NNILKGCTAXXXXXXXXXXXSFFCSITRIENSTYL 5 N LK CTA SFFCSIT IEN TYL Sbjct: 2484 NYYLKRCTAKEILLLQSEKLSFFCSITGIENGTYL 2380
>LOC_Os03g55090:12003.t04773:unspliced-genomic alpha-1,4 glucan phosphorylase, L isozyme, chloroplast precursor,| putative, expressed Length = 6768 Score = 49.6 bits (102), Expect(2) = 6e-12 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = +2 / +1 Query: 152 WSEFPSKVAVQMNDTHPTLAI 214 W +FPSKVAVQMNDTHPTL I Sbjct: 3247 WEDFPSKVAVQMNDTHPTLCI 3309 Score = 42.3 bits (86), Expect(2) = 6e-12 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +2 / +3 Query: 47 GKLLRLKQQYFLCSASLQDIIFRFKE 124 GK+LRLKQQY LCSASLQ F+E Sbjct: 3147 GKVLRLKQQYTLCSASLQGYYCSFRE 3224 Score = 31.3 bits (62), Expect(3) = 0.001 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = -2 / -2 Query: 213 MARVG*VSFI*TATLEGNSLHFPET 139 M VG*VSFI TATLEG S E+ Sbjct: 3308 MHSVG*VSFICTATLEGKSSQLRES 3234 Score = 25.4 bits (49), Expect(3) = 0.001 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 / -3 Query: 93 DALQRKYCCFNLRSFP 46 +A YCCF R+FP Sbjct: 3193 EAEHNVYCCFRRRTFP 3146 Score = 22.6 bits (43), Expect(3) = 0.001 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 / -2 Query: 57 RSFPSSVASPG*RTAHI 7 ++FPS +SPG T HI Sbjct: 3158 KNFPSGDSSPGFST*HI 3108 Score = 40.5 bits (82), Expect = 0.044 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = +2 / +1 Query: 5 QICAVLYPGDATEEGKLLRLKQQYFLCSASLQDIIFRFKERKPDRVS 145 QIC VL PGD + EGK +DII RF+ R D +S Sbjct: 3106 QICHVLNPGDESPEGKFFA*SNNIHYAQPHYRDIIARFERRAGDSLS 3246
>LOC_Os03g60992:12003.t05334:unspliced-genomic expressed protein| Length = 7339 Score = 35.4 bits (71), Expect(2) = 0.13 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 / +3 Query: 1600 CACCWHLMRLLYHLE*KVCTVNKRVACFFHFV 1695 C CC H + Y L C V+K V C FH++ Sbjct: 4986 CVCCSHKYFITYLLPISPCIVSKPVFCPFHYI 5081 Score = 28.1 bits (55), Expect(2) = 0.13 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 / +1 Query: 654 SSCTRRSYCSLLSVVTFVCAINLVNHYLC 740 S C S+C LS+ T INL+ LC Sbjct: 1978 SICCSSSFCCWLSITTLHVWINLLTDCLC 2064
>LOC_Os12g06530:12012.t00538:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5670 Score = 35.4 bits (71), Expect = 1.5 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -1 / -1 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+H HL ++ +S+ Sbjct: 4434 SSKSQQKSNCLNSSNRSKSFIKIHTLHLGKTLSNKSS 4324
>LOC_Os11g06600:12011.t00552:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4519 Score = 35.0 bits (70), Expect = 2.0 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -1 / -3 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRS 872 + +++ K NCLNSS +NK K+ HL+ ++ +S Sbjct: 3377 SSKSQQKSNCLNSSNRNKSFIKIQTLHLSKTLSNKS 3270
>LOC_Os06g40960:12006.t03791:unspliced-genomic zinc finger protein, putative, expressed| Length = 3365 Score = 35.0 bits (70), Expect = 2.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 / +2 Query: 1462 PPPNIKISTW*QQQHREGLENEVPCSFRRK 1373 PPP K+ QQ+HR+ +E C +RRK Sbjct: 716 PPPATKLQQQQQQKHRQQVEEAAGCKWRRK 805
>LOC_Os05g08930:12005.t00770:unspliced-genomic expressed protein| Length = 2641 Score = 28.6 bits (56), Expect(2) = 2.0 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 / -1 Query: 1296 LNSYACYNRCLPSTNNSYLFYLSMIIFLRNEHGTSFSRPSLCCCC 1430 ++ Y C + S+++S+ S + TS S PS CCC Sbjct: 619 ISMYICTSSSASSSSSSFSSTSSSSSCRSHASSTSASTPSSSCCC 485 Score = 23.5 bits (45), Expect(2) = 2.0 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = +3 / -1 Query: 1413 SLCCCCYHVD 1442 S CCCC+ D Sbjct: 496 SCCCCCFSSD 467
>LOC_Os05g37160:12005.t03259:unspliced-genomic cell division protein ftsZ, putative, expressed| Length = 3732 Score = 34.5 bits (69), Expect = 2.8 Identities = 13/38 (34%), Positives = 25/38 (65%) Frame = -3 / -3 Query: 1601 HPRTVIYTFLSCPHIHYFLSSLIFLIPRNPCQIATASR 1488 H ++I++ +SC YFL+ +I IPR PC+ ++++ Sbjct: 1741 HGGSLIHSAMSC*GATYFLTVIISEIPRTPCRSISSAK 1628
>LOC_Os03g42780:12003.t03679:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative| Length = 5135 Score = 34.5 bits (69), Expect = 2.8 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 / +1 Query: 1656 HC*QTCCLFLSFCVCILGFMGSNTVLVENSIFVMSPLLN 1772 HC CCLFLSF + IL L S + SPLL+ Sbjct: 1705 HCEWCCCLFLSFFLYILLSFKRPNELTLGSFYGFSPLLD 1821
>LOC_Os10g11070:12010.t00908:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2931 Score = 34.5 bits (69), Expect = 2.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 / -3 Query: 1503 RHRFPKNQQPPCSPHLLILKYR 1438 RHRFP + PP P ++ LKYR Sbjct: 1306 RHRFPPRKYPPPEPVIIYLKYR 1241
>LOC_Os02g26800:12002.t02374:unspliced-genomic ulp1 protease family, C-terminal catalytic domain containing protein,| expressed Length = 3751 Score = 34.1 bits (68), Expect = 3.8 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +3 / -1 Query: 630 YHYFLHISSSCTRRSYCSLLSVVTFVCAINLVNHYLCC 743 YH+ L I+ S R L TFVC IN LCC Sbjct: 2851 YHFML*IAGSNFRSLITISLVACTFVCTINFPQLALCC 2738
>LOC_Os11g44310:12011.t03959:unspliced-genomic expressed protein| Length = 5067 Score = 34.1 bits (68), Expect = 3.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 / -1 Query: 544 YGTTSVFFSPICLLTMSALEMNCLN 618 Y TT VFFSP+ + + + MNC N Sbjct: 1971 YFTTKVFFSPVAFMIIVKVTMNCYN 1897
>LOC_Os06g37400:12006.t03435:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10240 Score = 34.1 bits (68), Expect = 3.8 Identities = 12/41 (29%), Positives = 26/41 (63%) Frame = -1 / -1 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRSTTLMF 857 + +++ K NCLNSS ++K K+ HL+ ++ +S+ + + Sbjct: 9004 SSKSQQKSNCLNSSNRSKSFIKIQTLHLSKTLSNKSSFISY 8882
>LOC_Os04g59380:12004.t05395:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 2751 Score = 34.1 bits (68), Expect = 3.8 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 / -2 Query: 574 ICLLTMSALEMNCLNSQIATIIFYIFLPHVLVDHIVLCYQWLLL 705 +C L M+AL + L S A+ I L V + H+ CY LLL Sbjct: 416 LCALLMTALHLAALVSAAASTALVIHLLLVFLIHLPACYHQLLL 285
>LOC_Os11g31530:12011.t02751:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor,| putative Length = 2031 Score = 29.5 bits (58), Expect(2) = 4.7 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 / +3 Query: 1281 TIAVILNSYACYNRCLPSTNNSYLFYLSMIIFLRNEHGTSFS 1406 TI+ + + C L S +LF L+ I F RN HG + + Sbjct: 1005 TISHVFSDTVCLKIVLTSICFLFLFKLAKIYFCRNLHGNNLT 1130 Score = 26.7 bits (52), Expect(2) = 4.7 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +3 / +1 Query: 594 CP*DELLKQSDSYHYFLHISSSCTRRSYCSLLSVVTFVCAINLVNHYLCCQ 746 C +LL D +F I++SC + +++ +INLVN C+ Sbjct: 745 CQDPKLLIFWDGGSFFFFIAASCCKLDSLCFYTLLNDSTSINLVNICFLCR 897
>LOC_Os04g27960:12004.t02497:unspliced-genomic B3 DNA binding domain containing protein| Length = 3740 Score = 26.7 bits (52), Expect(2) = 4.8 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +3 / -3 Query: 1419 CCCCYHVDILIL 1454 CCCC+ +D+L L Sbjct: 3576 CCCCFLLDLLAL 3541 Score = 24.0 bits (46), Expect(2) = 4.8 Identities = 6/9 (66%), Positives = 7/9 (77%) Frame = +3 / -3 Query: 1404 SRPSLCCCC 1430 S P +CCCC Sbjct: 3594 SPPMICCCC 3568
>LOC_Os12g18190:12012.t01669:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10187 Score = 33.6 bits (67), Expect = 5.2 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -1 / -2 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL S+ +S+ Sbjct: 8083 SSKSQQKSNCLNSSNRSKSFIKIQTLHLRKSLSNKSS 7973
>LOC_Os11g18830:12011.t01653:unspliced-genomic survival motor neuron containing protein, expressed| Length = 6426 Score = 33.6 bits (67), Expect = 5.2 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 / -2 Query: 637 IFYIFLPHVLVDHIVLCYQWLLLF 708 IFY+ P L + +LCY W+ LF Sbjct: 3464 IFYVPSPEALATYALLCYTWICLF 3393
>LOC_Os06g49790:12006.t04663:unspliced-genomic JD1, putative, expressed| Length = 5196 Score = 33.1 bits (66), Expect = 7.1 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 / +3 Query: 684 LLSVVTFVCAINLVNHYLCCQLGY 755 LL + F C++ L+ HY CC + Y Sbjct: 3747 LLPCMVFFCSLVLLRHYSCCSINY 3818
>LOC_Os05g04510:12005.t00347:unspliced-genomic S-adenosylmethionine synthetase 1, putative, expressed| Length = 3035 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 / -3 Query: 1362 SMIIFLRNEHGTSFSRPSLCCCCYHVDILILG 1457 ++ IF RN+H +R + C YH++I +LG Sbjct: 999 NLTIFCRNQHKRIINRGATMYCNYHINIPLLG 904
>LOC_Os03g24220:12003.t02117:unspliced-genomic villin-3, putative, expressed| Length = 11625 Score = 33.1 bits (66), Expect = 7.1 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = +3 / -3 Query: 666 RRSYCSLLSVVTFVCAINLVNHYLCCQ 746 + +YCS +++ +C + L++HY CC+ Sbjct: 3508 KSTYCSQELILSELCLLTLIDHY*CCK 3428
>LOC_Os11g35730:12011.t03120:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2555 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -1 / -3 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL+ ++ +S+ Sbjct: 1320 SSKSQQKSNCLNSSNRSKSFIKIQTLHLSKTLSNKSS 1210
>LOC_Os11g30960:12011.t02696:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5095 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -1 / -3 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 +++++ K NC+NSST++K K+ HL+ + S+ Sbjct: 3974 SRKSQQKSNCINSSTRSKSFIKIQTLHLSKILSNNSS 3864
>LOC_Os09g35810:12009.t03059:unspliced-genomic NC domain containing protein, expressed| Length = 3529 Score = 33.1 bits (66), Expect = 7.1 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 / -1 Query: 1738 STKTVFEPMKPSMHTQNERNKQHVC*QCRP 1649 S + +P P H Q ++N QHV +C P Sbjct: 2119 SFSCILQPFHPGCHVQKQQNPQHVLPRCGP 2030
>LOC_Os09g15020:12009.t01292:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4713 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -1 / -1 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL+ ++ +S+ Sbjct: 3477 SSKSQQKSNCLNSSNRSKSFIKIQTLHLSKTLSNKSS 3367
>LOC_Os07g20880:12007.t01891:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7228 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 / -1 Query: 1522 HVIHVRSPPLPEKSATSLLSPPPN 1451 HV+H+ PPLP +A LS PP+ Sbjct: 106 HVLHLSPPPLPPPAAPRRLSGPPH 35
>LOC_Os04g23340:12004.t02060:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7215 Score = 33.1 bits (66), Expect = 7.1 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -1 / -2 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL+ ++ +S+ Sbjct: 4430 SSKSQQKSNCLNSSNRSKSFIKIQTLHLSKTLSNKSS 4320
>LOC_Os01g52290:12001.t04656:unspliced-genomic expressed protein| Length = 2022 Score = 33.1 bits (66), Expect = 7.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 / +2 Query: 1036 TTKCSGGGWPVTPSKSCS 1089 TT+C+ GGWP P SC+ Sbjct: 1529 TTRCTCGGWPRAPRSSCA 1582
>LOC_Os03g05040:12003.t00378:unspliced-genomic expressed protein| Length = 4669 Score = 31.8 bits (63), Expect(2) = 7.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 / +2 Query: 609 LLKQSDSYHYFLHISSSCTRRSYCSLLSVVTF 704 LLK+ Y +H+ S R++ C+LLS+ TF Sbjct: 1067 LLKKICLYFIAIHVVISNNRKNICTLLSITTF 1162 Score = 24.9 bits (48), Expect(2) = 7.3 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +1 / +3 Query: 1594 RGCACCWHL 1620 R CACCW L Sbjct: 1413 RYCACCWRL 1439
>LOC_Os03g08460:12003.t00703:unspliced-genomic transcription factor EREBP, putative, expressed| Length = 1977 Score = 28.6 bits (56), Expect(2) = 8.3 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +3 / -1 Query: 204 LLPSKLKSSGKIHSICGSAEHCFAVH 281 LL S SSG +IC S HC +H Sbjct: 1401 LLASSSMSSGVALAICSSRGHCLILH 1324 Score = 26.7 bits (52), Expect(2) = 8.3 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +3 / -3 Query: 1671 CCLFLSFCVCILGFMGSNTVLV 1736 CC + CVC+ G G V+V Sbjct: 841 CCTASTACVCVCGVDGHGVVVV 776
>LOC_Os05g36184:12005.t03212:unspliced-genomic expressed protein| Length = 4328 Score = 32.7 bits (65), Expect = 9.8 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +3 / -2 Query: 1410 PSLCCCCYHVDILILGGGESKE 1475 P+ CCCC H+ I GGG ++E Sbjct: 157 PNCCCCCCHMRGEIEGGGGAEE 92
>LOC_Os05g16180:12005.t01389:unspliced-genomic NB-ARC domain containing protein| Length = 5243 Score = 32.7 bits (65), Expect = 9.8 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 / -3 Query: 624 DSYHYFLHISSSCTRRSY 677 D YHYFLH+ SSC SY Sbjct: 429 DLYHYFLHLFSSCLFFSY 376
>LOC_Os04g10240:12004.t00857:unspliced-genomic nicotiana lesion-inducing like, putative, expressed| Length = 3490 Score = 32.7 bits (65), Expect = 9.8 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 / +2 Query: 1374 FLRNEHGTSFSRPSLCCCCYHV 1439 F+ H TSFS C CCYHV Sbjct: 2162 FIYLYHSTSFSTDKDCHCCYHV 2227
>LOC_Os12g15670:12012.t01422:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7687 Score = 32.7 bits (65), Expect = 9.8 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 / -1 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL ++ +S+ Sbjct: 7180 SNKSQQKSNCLNSSNRSKSFIKIQTLHLAKTLSNKSS 7070
>LOC_Os07g17480:12007.t01608:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4405 Score = 32.7 bits (65), Expect = 9.8 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -1 / -1 Query: 979 TKETRLKMNCLNSSTKNKRS*KVHCWHLTSSIKMRST 869 + +++ K NCLNSS ++K K+ HL+ ++ +S+ Sbjct: 3361 SSKSQQKSNCLNSSNRSKSFIKIQTLHLSRTLSNKSS 3251 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 842,990,794 Number of extensions: 13802217 Number of successful extensions: 59141 Number of sequences better than 10.0: 35 Length of query: 695 Length of database: 55,613,886 Length adjustment: 52 Effective length of query: 643 Effective length of database: 52,687,430 Effective search space: 33878017490 Effective search space used: 33878017490 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
