ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf117o21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK062431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
2emb|CT830005.1| Oryza sativa (indica cultivar-group) cDNA clone:... 398 e-107
3gb|DQ244198.1| Zea mays clone 3074 mRNA sequence 299 8e-78
4ref|NM_001069072.1| Oryza sativa (japonica cultivar-group) Os08g... 222 2e-54
5dbj|AK062820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 2e-54
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
7dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
8dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
9ref|NM_119017.3| Arabidopsis thaliana electron transporter/ thio... 72 3e-09
10gb|BT003703.1| Arabidopsis thaliana At4g28730 mRNA, complete cds 72 3e-09
11dbj|AK118672.1| Arabidopsis thaliana At4g28730 mRNA for unknown ... 72 3e-09
12emb|BX828677.1|CNS0A4E7 Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
13ref|NM_127586.2| Arabidopsis thaliana arsenate reductase (glutar... 60 1e-05
14gb|AY122897.1| Arabidopsis thaliana At2g20270/F11A3.18 mRNA, com... 60 1e-05
15gb|AY094445.1| Arabidopsis thaliana At2g20270/F11A3.18 mRNA, com... 60 1e-05
16gb|AY087023.1| Arabidopsis thaliana clone 30611 mRNA, complete s... 60 1e-05
17emb|BX821801.1|CNS0AAAD Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
18gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome 50 0.013
19gb|AC189534.1| Brassica rapa subsp. pekinensis clone KBrH001J06,... 48 0.050
20emb|Z49699.1|RCGLREDXN R.communis mRNA for glutaredoxin 48 0.050
21gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome 46 0.20
22gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 46 0.20
23gb|AY657740.1| Synthetic construct Peudomonas aeruginosa clone F... 46 0.20
24gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome 44 0.78
25ref|XM_001080401.1| PREDICTED: Rattus norvegicus glycine decarbo... 44 0.78
26ref|XM_219785.4| PREDICTED: Rattus norvegicus glycine decarboxyl... 44 0.78
27ref|NM_138595.1| Mus musculus glycine decarboxylase (Gldc), mRNA... 44 0.78
28gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, co... 44 0.78
29dbj|AK139929.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 44 0.78
30dbj|AK080937.1| Mus musculus 4 days neonate male adipose cDNA, R... 44 0.78
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.78
32dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.78
33dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.78
34gb|AC102722.7| Mus musculus chromosome 19, clone RP24-108O16, co... 44 0.78
35gb|AF047694.1|AF047694 Vernicia fordii glutaredoxin mRNA, comple... 44 0.78
36ref|XM_531519.2| PREDICTED: Pan troglodytes chondrolectin, trans... 42 3.1
37gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10;... 42 3.1
38gb|AC186761.1| Pongo pygmaeus abelii chromosome UNK clone CH276-... 42 3.1
39gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 3.1
40gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 42 3.1
41gb|AF523315.1| Homo sapiens chondrolectin variant CHODLFdeltaE m... 42 3.1
42gb|AF523313.1| Homo sapiens chondrolectin variant CHODLdeltaE mR... 42 3.1
43gb|AF406809.1|AF406809 Tilia platyphyllos glutaredoxin (Cl31) mR... 42 3.1
44emb|AL353640.7| Human DNA sequence from clone RP11-458E15 on chr... 42 3.1
45emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 42 3.1
46gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, co... 42 3.1 
>dbj|AK062431.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-H10, full
           insert sequence
          Length = 748
 Score =  406 bits (205), Expect = e-110
 Identities = 327/368 (88%), Gaps = 6/368 (1%)
 Strand = Plus / Plus

                                                                       
Query: 192 tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
           ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 163 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 216

                                                                       
Query: 252 actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 217 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 276

                                                                       
Query: 312 tcgtcatctactccaagtcgtggtgctcgtattcaatggaggtcaagggtctcttcaagc 371
           ||||||||||||||||||| |||||||| || || |||||||||||||  ||||||||||
Sbjct: 277 tcgtcatctactccaagtcctggtgctcctactccatggaggtcaaggcgctcttcaagc 336

                                                                       
Query: 372 ggattggcgtggatccacatgtcatcgagctcgaccatctcggtgctcagggaccacaac 431
           |||| |||||  | || || ||||||||||||||||| ||||| || |||||||| ||  
Sbjct: 337 ggatcggcgtccagccgcacgtcatcgagctcgaccaactcggcgcacagggacctcagt 396

                                                                       
Query: 432 tgcaaaaggtgttagagaggttgactggacagtccactgttcctaatgttttcattggtg 491
           ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgcaaaaggtgttagagcggctgactggacagtccactgttcctaatgttttcattggtg 456

                                                                       
Query: 492 gaaagcacattggcggctgtacagatacagtgaaactttatcgcaaaggggagctagcaa 551
           ||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||| |
Sbjct: 457 gaaagcacattggtggctgtacagatactgtgaagcttcatcgcaaaggggagctagcta 516

                   
Query: 552 cgatgctg 559
           | ||||||
Sbjct: 517 ccatgctg 524
to top
>emb|CT830005.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040F10, full
           insert sequence
          Length = 803

 Score =  398 bits (201), Expect = e-107
 Identities = 326/368 (88%), Gaps = 6/368 (1%)
 Strand = Plus / Plus

                                                                       
Query: 192 tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
           ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 200 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 253

                                                                       
Query: 252 actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 254 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 313

                                                                       
Query: 312 tcgtcatctactccaagtcgtggtgctcgtattcaatggaggtcaagggtctcttcaagc 371
           ||||||||||||||||||| |||||||| || || ||||| |||||||  ||||||||||
Sbjct: 314 tcgtcatctactccaagtcctggtgctcctactccatggaagtcaaggcgctcttcaagc 373

                                                                       
Query: 372 ggattggcgtggatccacatgtcatcgagctcgaccatctcggtgctcagggaccacaac 431
           |||| |||||  | || || ||||||||||||||||| ||||| || |||||||| ||  
Sbjct: 374 ggatcggcgtccagccgcacgtcatcgagctcgaccaactcggcgcacagggacctcagt 433

                                                                       
Query: 432 tgcaaaaggtgttagagaggttgactggacagtccactgttcctaatgttttcattggtg 491
           ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgcaaaaggtgttagagcggctgactggacagtccactgttcctaatgttttcattggtg 493

                                                                       
Query: 492 gaaagcacattggcggctgtacagatacagtgaaactttatcgcaaaggggagctagcaa 551
           ||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||| |
Sbjct: 494 gaaagcacattggtggctgtacagatactgtgaagcttcatcgcaaaggggagctagcta 553

                   
Query: 552 cgatgctg 559
           | ||||||
Sbjct: 554 ccatgctg 561
to top
>gb|DQ244198.1| Zea mays clone 3074 mRNA sequence
          Length = 748

 Score =  299 bits (151), Expect = 8e-78
 Identities = 307/359 (85%)
 Strand = Plus / Plus

                                                                       
Query: 191 ctcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccg 250
           |||||||| || ||| ||| ||||||| | ||||||||||| || |||||| | || |||
Sbjct: 146 ctcgccgcacgtcgcaccaaggccgtctccgccagggcctcctcctcctctccatcaccg 205

                                                                       
Query: 251 gactcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaacccc 310
           ||||| |||||||| |||||||||||||| || |||||||||||| | || || ||||||
Sbjct: 206 gactcttccttcggttcgcggatggaggattccgtcaagaagacggtggctgataacccc 265

                                                                       
Query: 311 gtcgtcatctactccaagtcgtggtgctcgtattcaatggaggtcaagggtctcttcaag 370
           || ||||||||||| ||||| |||||||| ||||| |||||||| |||   |||||||||
Sbjct: 266 gttgtcatctactctaagtcatggtgctcatattccatggaggtgaagtcactcttcaag 325

                                                                       
Query: 371 cggattggcgtggatccacatgtcatcgagctcgaccatctcggtgctcagggaccacaa 430
           ||||| || ||| | || || ||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 326 cggatcggtgtgcagccccacgtcatcgagctcgacaatctcggagctcaaggaccacaa 385

                                                                       
Query: 431 ctgcaaaaggtgttagagaggttgactggacagtccactgttcctaatgttttcattggt 490
           || |||||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| |||
Sbjct: 386 ctacaaaaggtattagaaaggctgactggacagtctactgttcctaacgttttcatcggt 445

                                                                      
Query: 491 ggaaagcacattggcggctgtacagatacagtgaaactttatcgcaaaggggagctagc 549
           ||||| ||| |||| ||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 446 ggaaaacacgttggaggctgcacagataccgtgaagctgtatcgcaagggggagctagc 504
to top
>ref|NM_001069072.1| Oryza sativa (japonica cultivar-group) Os08g0565800 (Os08g0565800)
           mRNA, partial cds
          Length = 720

 Score =  222 bits (112), Expect = 2e-54
 Identities = 154/168 (91%)
 Strand = Plus / Plus

                                                                       
Query: 392 gtcatcgagctcgaccatctcggtgctcagggaccacaactgcaaaaggtgttagagagg 451
           ||||||||||||||||| ||||| || |||||||| ||  ||||||||||||||||| ||
Sbjct: 329 gtcatcgagctcgaccaactcggcgcacagggacctcagttgcaaaaggtgttagagcgg 388

                                                                       
Query: 452 ttgactggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgt 511
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 ctgactggacagtccactgttcctaatgttttcattggtggaaagcacattggtggctgt 448

                                                           
Query: 512 acagatacagtgaaactttatcgcaaaggggagctagcaacgatgctg 559
           |||||||| ||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 449 acagatactgtgaagcttcatcgcaaaggggagctagctaccatgctg 496



 Score =  174 bits (88), Expect = 3e-40
 Identities = 135/151 (89%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                       
Query: 192 tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
           ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 172 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 225

                                                                       
Query: 252 actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 226 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 285

                                          
Query: 312 tcgtcatctactccaagtcgtggtgctcgta 342
           ||||||||||||||||||| |||||||||||
Sbjct: 286 tcgtcatctactccaagtcctggtgctcgta 316
to top
>dbj|AK062820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-F01, full
           insert sequence
          Length = 720

 Score =  222 bits (112), Expect = 2e-54
 Identities = 154/168 (91%)
 Strand = Plus / Plus

                                                                       
Query: 392 gtcatcgagctcgaccatctcggtgctcagggaccacaactgcaaaaggtgttagagagg 451
           ||||||||||||||||| ||||| || |||||||| ||  ||||||||||||||||| ||
Sbjct: 329 gtcatcgagctcgaccaactcggcgcacagggacctcagttgcaaaaggtgttagagcgg 388

                                                                       
Query: 452 ttgactggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgt 511
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 ctgactggacagtccactgttcctaatgttttcattggtggaaagcacattggtggctgt 448

                                                           
Query: 512 acagatacagtgaaactttatcgcaaaggggagctagcaacgatgctg 559
           |||||||| ||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 449 acagatactgtgaagcttcatcgcaaaggggagctagctaccatgctg 496



 Score =  168 bits (85), Expect = 2e-38
 Identities = 132/148 (89%), Gaps = 6/148 (4%)
 Strand = Plus / Plus

                                                                       
Query: 192 tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
           ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 172 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 225

                                                                       
Query: 252 actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 226 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 285

                                       
Query: 312 tcgtcatctactccaagtcgtggtgctc 339
           ||||||||||||||||||| ||||||||
Sbjct: 286 tcgtcatctactccaagtcctggtgctc 313
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  174 bits (88), Expect = 3e-40
 Identities = 135/151 (89%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                            
Query: 192      tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
                ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 28336268 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 28336321

                                                                            
Query: 252      actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
                | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28336322 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 28336381

                                               
Query: 312      tcgtcatctactccaagtcgtggtgctcgta 342
                ||||||||||||||||||| |||||||||||
Sbjct: 28336382 tcgtcatctactccaagtcctggtgctcgta 28336412



 Score =  103 bits (52), Expect = 1e-18
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                            
Query: 419      cagggaccacaactgcaaaaggtgttagagaggttgactggacagtccactgttcctaat 478
                |||||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 28337167 cagggacctcagttgcaaaaggtgttagagcggctgactggacagtccactgttcctaat 28337226

                            
Query: 479      gttttcattggt 490
                ||||||||||||
Sbjct: 28337227 gttttcattggt 28337238



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 347      atggaggtcaagggtctcttcaagcggattggcgtggatccacatgtcatcgagctcgac 406
                |||||||||||||  |||||||||||||| |||||  | || || |||||||||||||||
Sbjct: 28336498 atggaggtcaaggcgctcttcaagcggatcggcgtccagccgcacgtcatcgagctcgac 28336557

                         
Query: 407      catctcggt 415
                || ||||||
Sbjct: 28336558 caactcggt 28336566



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 514      agatacagtgaaactttatcgcaaaggggagctagcaacgatgctg 559
                |||||| ||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 28338015 agatactgtgaagcttcatcgcaaaggggagctagctaccatgctg 28338060



 Score = 48.1 bits (24), Expect = 0.050
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 488      ggtggaaagcacattggcggctgtacag 515
                ||||||||||||||||| ||||||||||
Sbjct: 28337432 ggtggaaagcacattggtggctgtacag 28337459
to top
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  174 bits (88), Expect = 3e-40
 Identities = 135/151 (89%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                         
Query: 192   tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
             ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 65074 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 65127

                                                                         
Query: 252   actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
             | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65128 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 65187

                                            
Query: 312   tcgtcatctactccaagtcgtggtgctcgta 342
             ||||||||||||||||||| |||||||||||
Sbjct: 65188 tcgtcatctactccaagtcctggtgctcgta 65218



 Score =  103 bits (52), Expect = 1e-18
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                         
Query: 419   cagggaccacaactgcaaaaggtgttagagaggttgactggacagtccactgttcctaat 478
             |||||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 65973 cagggacctcagttgcaaaaggtgttagagcggctgactggacagtccactgttcctaat 66032

                         
Query: 479   gttttcattggt 490
             ||||||||||||
Sbjct: 66033 gttttcattggt 66044



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 347   atggaggtcaagggtctcttcaagcggattggcgtggatccacatgtcatcgagctcgac 406
             |||||||||||||  |||||||||||||| |||||  | || || |||||||||||||||
Sbjct: 65304 atggaggtcaaggcgctcttcaagcggatcggcgtccagccgcacgtcatcgagctcgac 65363

                      
Query: 407   catctcggt 415
             || ||||||
Sbjct: 65364 caactcggt 65372



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 514   agatacagtgaaactttatcgcaaaggggagctagcaacgatgctg 559
             |||||| ||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 66821 agatactgtgaagcttcatcgcaaaggggagctagctaccatgctg 66866



 Score = 48.1 bits (24), Expect = 0.050
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 488   ggtggaaagcacattggcggctgtacag 515
             ||||||||||||||||| ||||||||||
Sbjct: 66238 ggtggaaagcacattggtggctgtacag 66265
to top
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0705A05
          Length = 143765

 Score =  174 bits (88), Expect = 3e-40
 Identities = 135/151 (89%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                          
Query: 192    tcgccgcgcgccgcgccagggccgtcgctgccagggcctcgtcatcctcttcctcgccgg 251
              ||||||| |||||||||||| || ||||  |||||||||| || ||||||      ||||
Sbjct: 128083 tcgccgcacgccgcgccaggtccctcgccaccagggcctcctcctcctct------ccgg 128136

                                                                          
Query: 252    actcctccttcggctcgcggatggaggactctgtcaagaagacgctcgccgacaaccccg 311
              | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 128137 attcctccttcggctcgcggatggaggactctgtcaagaggacgctcgccgacaaccccg 128196

                                             
Query: 312    tcgtcatctactccaagtcgtggtgctcgta 342
              ||||||||||||||||||| |||||||||||
Sbjct: 128197 tcgtcatctactccaagtcctggtgctcgta 128227



 Score =  103 bits (52), Expect = 1e-18
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                          
Query: 419    cagggaccacaactgcaaaaggtgttagagaggttgactggacagtccactgttcctaat 478
              |||||||| ||  ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 128982 cagggacctcagttgcaaaaggtgttagagcggctgactggacagtccactgttcctaat 129041

                          
Query: 479    gttttcattggt 490
              ||||||||||||
Sbjct: 129042 gttttcattggt 129053



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 347    atggaggtcaagggtctcttcaagcggattggcgtggatccacatgtcatcgagctcgac 406
              |||||||||||||  |||||||||||||| |||||  | || || |||||||||||||||
Sbjct: 128313 atggaggtcaaggcgctcttcaagcggatcggcgtccagccgcacgtcatcgagctcgac 128372

                       
Query: 407    catctcggt 415
              || ||||||
Sbjct: 128373 caactcggt 128381



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 514    agatacagtgaaactttatcgcaaaggggagctagcaacgatgctg 559
              |||||| ||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 129830 agatactgtgaagcttcatcgcaaaggggagctagctaccatgctg 129875



 Score = 48.1 bits (24), Expect = 0.050
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 488    ggtggaaagcacattggcggctgtacag 515
              ||||||||||||||||| ||||||||||
Sbjct: 129247 ggtggaaagcacattggtggctgtacag 129274
to top
>ref|NM_119017.3| Arabidopsis thaliana electron transporter/ thiol-disulfide exchange
           intermediate (AT4G28730) mRNA, complete cds
          Length = 778

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 466 cactgttcctaatgttttcattggtggaaagcacattggcggctgtacagatacagtgaa 525
           ||||||||||||||||||| |  |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 477 cactgttcctaatgttttcgtatgtggcaagcacattggtggctgcacagatacagtgaa 536
to top
>gb|BT003703.1| Arabidopsis thaliana At4g28730 mRNA, complete cds
          Length = 525

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 466 cactgttcctaatgttttcattggtggaaagcacattggcggctgtacagatacagtgaa 525
           ||||||||||||||||||| |  |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 399 cactgttcctaatgttttcgtatgtggcaagcacattggtggctgcacagatacagtgaa 458
to top
>dbj|AK118672.1| Arabidopsis thaliana At4g28730 mRNA for unknown protein, complete
           cds, clone: RAFL19-94-E06
          Length = 747

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 466 cactgttcctaatgttttcattggtggaaagcacattggcggctgtacagatacagtgaa 525
           ||||||||||||||||||| |  |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 477 cactgttcctaatgttttcgtatgtggcaagcacattggtggctgcacagatacagtgaa 536
to top
>emb|BX828677.1|CNS0A4E7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL29ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 717

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 466 cactgttcctaatgttttcattggtggaaagcacattggcggctgtacagatacagtgaa 525
           ||||||||||||||||||| |  |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 416 cactgttcctaatgttttcgtatgtggcaagcacattggtggctgcacagatacagtgaa 475
to top
>ref|NM_127586.2| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron
           transporter/ thiol-disulfide exchange intermediate
           (AT2G20270) mRNA, complete cds
          Length = 879

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 455 actggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgtaca 514
           |||||||| | ||||||||| ||||||||||| || || ||||||||||| |||||  ||
Sbjct: 446 actggacaatacactgttcccaatgttttcatcggaggcaagcacattggtggctgctca 505

                 
Query: 515 gataca 520
           ||||||
Sbjct: 506 gataca 511
to top
>gb|AY122897.1| Arabidopsis thaliana At2g20270/F11A3.18 mRNA, complete cds
          Length = 540

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 455 actggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgtaca 514
           |||||||| | ||||||||| ||||||||||| || || ||||||||||| |||||  ||
Sbjct: 403 actggacaatacactgttcccaatgttttcatcggaggcaagcacattggtggctgctca 462

                 
Query: 515 gataca 520
           ||||||
Sbjct: 463 gataca 468
to top
>gb|AY094445.1| Arabidopsis thaliana At2g20270/F11A3.18 mRNA, complete cds
          Length = 743

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 455 actggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgtaca 514
           |||||||| | ||||||||| ||||||||||| || || ||||||||||| |||||  ||
Sbjct: 441 actggacaatacactgttcccaatgttttcatcggaggcaagcacattggtggctgctca 500

                 
Query: 515 gataca 520
           ||||||
Sbjct: 501 gataca 506
to top
>gb|AY087023.1| Arabidopsis thaliana clone 30611 mRNA, complete sequence
          Length = 709

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 455 actggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctgtaca 514
           |||||||| | ||||||||| ||||||||||| || || ||||||||||| |||||  ||
Sbjct: 446 actggacaatacactgttcccaatgttttcatcggaggcaagcacattggtggctgctca 505

                 
Query: 515 gataca 520
           ||||||
Sbjct: 506 gataca 511
to top
>emb|BX821801.1|CNS0AAAD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL75ZC03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 644

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 455 actggacagtccactgttcctaatgttttcattggtggaaagcacattggcggctg 510
           |||||||| | ||||||||| ||||||||||| || || ||||||||||| |||||
Sbjct: 427 actggacaatacactgttcccaatgttttcatcggaggcaagcacattggtggctg 482
to top
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome
          Length = 3275944

 Score = 50.1 bits (25), Expect = 0.013
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 187     cgctctcgccgcgcgccgcgccagggccg 215
               ||||||||||||||||||||||| |||||
Sbjct: 1164681 cgctctcgccgcgcgccgcgccatggccg 1164709
to top
>gb|AC189534.1| Brassica rapa subsp. pekinensis clone KBrH001J06, complete sequence
          Length = 131374

 Score = 48.1 bits (24), Expect = 0.050
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 455   actggacagtccactgttcctaatgttttcat 486
             |||||||| | |||||||||||||||||||||
Sbjct: 96294 actggacaattcactgttcctaatgttttcat 96263
to top
>emb|Z49699.1|RCGLREDXN R.communis mRNA for glutaredoxin
          Length = 583

 Score = 48.1 bits (24), Expect = 0.050
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 476 aatgttttcattggtggaaagcacattggcggctgt 511
           |||||||||||||| ||||||||||| || ||||||
Sbjct: 248 aatgttttcattggcggaaagcacatcggtggctgt 283
to top
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
          Length = 6537648

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 193     cgccgcgcgccgcgccagggccg 215
               |||||||||||||||||||||||
Sbjct: 1658257 cgccgcgcgccgcgccagggccg 1658279
to top
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
          Length = 6264404

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 193     cgccgcgcgccgcgccagggccg 215
               |||||||||||||||||||||||
Sbjct: 3883384 cgccgcgcgccgcgccagggccg 3883362
to top
>gb|AY657740.1| Synthetic construct Peudomonas aeruginosa clone FLH033579.01F
           PA3470 gene, partial cds
          Length = 459

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 193 cgccgcgcgccgcgccagggccg 215
           |||||||||||||||||||||||
Sbjct: 405 cgccgcgcgccgcgccagggccg 383
to top
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome
          Length = 4412446

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 222     ccagggcctcgtcatcctcttc 243
               ||||||||||||||||||||||
Sbjct: 3946155 ccagggcctcgtcatcctcttc 3946176
to top
>ref|XM_001080401.1| PREDICTED: Rattus norvegicus glycine decarboxylase (predicted)
           (Gldc_predicted), mRNA
          Length = 3765

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 354 tcaagggtctcttcaagcggat 375
           ||||||||||||||||||||||
Sbjct: 494 tcaagggtctcttcaagcggat 473
to top
>ref|XM_219785.4| PREDICTED: Rattus norvegicus glycine decarboxylase (predicted)
           (Gldc_predicted), mRNA
          Length = 3765

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 354 tcaagggtctcttcaagcggat 375
           ||||||||||||||||||||||
Sbjct: 494 tcaagggtctcttcaagcggat 473
to top
>ref|NM_138595.1| Mus musculus glycine decarboxylase (Gldc), mRNA
 gb|BC017135.1| Mus musculus glycine decarboxylase, mRNA (cDNA clone MGC:27650
           IMAGE:4511573), complete cds
          Length = 3769

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 354 tcaagggtctcttcaagcggat 375
           ||||||||||||||||||||||
Sbjct: 489 tcaagggtctcttcaagcggat 468
to top
>gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, complete sequence
          Length = 207504

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 354   tcaagggtctcttcaagcggat 375
             ||||||||||||||||||||||
Sbjct: 53789 tcaagggtctcttcaagcggat 53810
to top
>dbj|AK139929.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020039B21 product:glycine decarboxylase, full
           insert sequence
          Length = 2871

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 354 tcaagggtctcttcaagcggat 375
           ||||||||||||||||||||||
Sbjct: 503 tcaagggtctcttcaagcggat 482
to top
>dbj|AK080937.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430214E13 product:GLYCINE
           DEHYDROGENASE [DECARBOXYLATING], MITOCHONDRIAL PRECURSOR
           (EC 1.4.4.2) (GLYCINE DECARBOXYLASE) (GLYCINE CLEAVAGE
           SYSTEM P- PROTEIN) homolog [Homo sapiens], full insert
           sequence
          Length = 3764

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 354 tcaagggtctcttcaagcggat 375
           ||||||||||||||||||||||
Sbjct: 501 tcaagggtctcttcaagcggat 480
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 670     ttattttgcatatccatcttga 691
               ||||||||||||||||||||||
Sbjct: 7190867 ttattttgcatatccatcttga 7190888
to top
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1381_H04
          Length = 130961

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 670   ttattttgcatatccatcttga 691
             ||||||||||||||||||||||
Sbjct: 42972 ttattttgcatatccatcttga 42993
to top
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 670    ttattttgcatatccatcttga 691
              ||||||||||||||||||||||
Sbjct: 142946 ttattttgcatatccatcttga 142967
to top
>gb|AC102722.7| Mus musculus chromosome 19, clone RP24-108O16, complete sequence
          Length = 141681

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 354   tcaagggtctcttcaagcggat 375
             ||||||||||||||||||||||
Sbjct: 86432 tcaagggtctcttcaagcggat 86411
to top
>gb|AF047694.1|AF047694 Vernicia fordii glutaredoxin mRNA, complete cds
          Length = 786

 Score = 44.1 bits (22), Expect = 0.78
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 466 cactgttcctaatgttttcattggtggaaagcacattggcggctgt 511
           |||||| || ||||||||||| || || ||||||||||| ||||||
Sbjct: 315 cactgtgcccaatgttttcatcggcggcaagcacattggtggctgt 360
to top
>ref|XM_531519.2| PREDICTED: Pan troglodytes chondrolectin, transcript variant 2
            (CHODL), mRNA
          Length = 2451

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 767  tgttgctgaagcagtaaaggaagaa 791
            |||| ||||||||||||||||||||
Sbjct: 1019 tgttactgaagcagtaaaggaagaa 1043
to top
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete
             sequence
          Length = 292102

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   cgtcatcctcttcctcgccgg 251
             |||||||||||||||||||||
Sbjct: 56491 cgtcatcctcttcctcgccgg 56511
to top
>gb|AC186761.1| Pongo pygmaeus abelii chromosome UNK clone CH276-23H12, complete
             sequence
          Length = 194996

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttgactggacagtccactgtt 472
             |||||||||||||||||||||
Sbjct: 54188 ttgactggacagtccactgtt 54208
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 181    tcgcctcgctctcgccgcgcgccgc 205
              ||||||||||| |||||||||||||
Sbjct: 710566 tcgcctcgctcacgccgcgcgccgc 710590
to top
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   cgtcatcctcttcctcgccgg 251
             |||||||||||||||||||||
Sbjct: 21415 cgtcatcctcttcctcgccgg 21435



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   cgtcatcctcttcctcgccgg 251
             |||||||||||||||||||||
Sbjct: 29671 cgtcatcctcttcctcgccgg 29691
to top
>gb|AF523315.1| Homo sapiens chondrolectin variant CHODLFdeltaE mRNA, complete cds
          Length = 821

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 767 tgttgctgaagcagtaaaggaagaa 791
           |||| ||||||||||||||||||||
Sbjct: 604 tgttactgaagcagtaaaggaagaa 628
to top
>gb|AF523313.1| Homo sapiens chondrolectin variant CHODLdeltaE mRNA, complete cds
          Length = 919

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 767 tgttgctgaagcagtaaaggaagaa 791
           |||| ||||||||||||||||||||
Sbjct: 702 tgttactgaagcagtaaaggaagaa 726
to top
>gb|AF406809.1|AF406809 Tilia platyphyllos glutaredoxin (Cl31) mRNA, complete cds
          Length = 508

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 467 actgttcctaatgttttcattggtggaaagcacattggcggctgt 511
           ||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 223 actgtgccaaatgttttcattggcgggaaacacattggtggctgt 267
to top
>emb|AL353640.7| Human DNA sequence from clone RP11-458E15 on chromosome 20 Contains
             ESTs, STSs, GSSs and a CpG island, complete sequence
          Length = 62477

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttgactggacagtccactgtt 472
             |||||||||||||||||||||
Sbjct: 27755 ttgactggacagtccactgtt 27775
to top
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 231    cgtcatcctcttcctcgccggactc 255
              |||| ||||||||||||||||||||
Sbjct: 175720 cgtcctcctcttcctcgccggactc 175744
to top
>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence
          Length = 205564

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 754    gtatatctgttactgttgctg 774
              |||||||||||||||||||||
Sbjct: 109211 gtatatctgttactgttgctg 109231


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 121,968,211
Number of extensions: 6631971
Number of successful extensions: 137407
Number of sequences better than 10.0: 46
Number of HSP's gapped: 137407
Number of HSP's successfully gapped: 68
Length of query: 820
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 798
Effective length of database: 18,508,616,841
Effective search space: 14769876239118
Effective search space used: 14769876239118
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top