ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf123a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF145482.1|AF145482 Mesembryanthemum crystallinum putative se... 44 0.78
2gb|AC185143.2| Nasonia vitripennis BAC NV_Bb-44F11 (Clemson Uni... 42 3.1
3gb|AF237668.2|AF237668 Oryctolagus cuniculus Rab11 family intera... 42 3.1
4emb|BX530097.6| Zebrafish DNA sequence from clone DKEY-191J3, co... 42 3.1
5emb|AL669945.16| Mouse DNA sequence from clone RP23-260K2 on chr... 42 3.1
6gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complet... 42 3.1

>gb|AF145482.1|AF145482 Mesembryanthemum crystallinum putative serine/threonine protein
           kinase mRNA, complete cds
          Length = 2443
 Score = 44.1 bits (22), Expect = 0.78
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 614 gaacaagaacaagggaaaggaa 635
           ||||||||||||||||||||||
Sbjct: 167 gaacaagaacaagggaaaggaa 188



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>gb|AC185143.2| Nasonia vitripennis  BAC NV_Bb-44F11 (Clemson University Genomics
             Nasonia vitripennis BAC Library) complete sequence
          Length = 117636

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 430   agaagagcaggaagatgctgg 450
             |||||||||||||||||||||
Sbjct: 15093 agaagagcaggaagatgctgg 15113



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>gb|AF237668.2|AF237668 Oryctolagus cuniculus Rab11 family interaction protein 1 mRNA,
            complete cds
          Length = 3518

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 429  gagaagagcaggaagatgctg 449
            |||||||||||||||||||||
Sbjct: 3002 gagaagagcaggaagatgctg 3022



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>emb|BX530097.6| Zebrafish DNA sequence from clone DKEY-191J3, complete sequence
          Length = 128212

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 691   tgtatattacagcatgtacat 711
             |||||||||||||||||||||
Sbjct: 34742 tgtatattacagcatgtacat 34722



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>emb|AL669945.16| Mouse DNA sequence from clone RP23-260K2 on chromosome X, complete
              sequence
          Length = 210523

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 595    tttgggatgtgtggaattgga 615
              |||||||||||||||||||||
Sbjct: 104006 tttgggatgtgtggaattgga 103986



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>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence
          Length = 178801

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 617   caagaacaagggaaaggaaga 637
             |||||||||||||||||||||
Sbjct: 51623 caagaacaagggaaaggaaga 51603


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 118,570,646
Number of extensions: 6138103
Number of successful extensions: 121923
Number of sequences better than 10.0: 6
Number of HSP's gapped: 121923
Number of HSP's successfully gapped: 6
Length of query: 817
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 795
Effective length of database: 18,508,616,841
Effective search space: 14714350388595
Effective search space used: 14714350388595
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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