ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf117k24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001074856.1| Oryza sativa (japonica cultivar-group) Os11g... 137 8e-29
2dbj|AK066700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 8e-29
3emb|CT834635.1| Oryza sativa (indica cultivar-group) cDNA clone:... 129 2e-26
4gb|DQ245996.1| Zea mays clone 94074 mRNA sequence 90 2e-14
5gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome... 82 4e-12
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 82 4e-12
7ref|NM_001073382.1| Oryza sativa (japonica cultivar-group) Os12g... 56 2e-04
8dbj|AK099463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
9dbj|AK069349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
10gb|AC138790.2| Mus musculus BAC clone RP23-292H23 from chromosom... 50 0.014
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.057
12emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.057
13gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosom... 46 0.22
14gb|AC147045.2| Mus musculus BAC clone RP23-100E5 from chromosome... 46 0.22
15gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, compl... 46 0.22
16gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome... 44 0.89
17gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosom... 44 0.89
18gb|AC157919.5| Mus musculus chromosome 3, clone RP23-131B7, comp... 44 0.89
19gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 44 0.89
20gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome... 44 0.89
21gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, co... 44 0.89
22emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chr... 44 0.89
23gb|AY112039.1| Zea mays CL5155_1 mRNA sequence 44 0.89
24gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 44 0.89
25gb|AC130815.4| Mus musculus BAC clone RP23-19E7 from 16, complet... 44 0.89
26ref|XM_001016255.1| Tetrahymena thermophila SB210 hypothetical p... 42 3.5
27ref|XM_001016253.1| Tetrahymena thermophila SB210 hypothetical p... 42 3.5
28emb|CT009735.1| Triticum aestivum 42 3.5
29gb|AC182660.2| Populus trichocarpa clone Pop1-125N19, complete s... 42 3.5
30gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome... 42 3.5
31gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome... 42 3.5
32gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Can... 42 3.5
33gb|AC159890.2| Mus musculus BAC clone RP24-80J11 from chromosome... 42 3.5
34gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, comple... 42 3.5
35gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, co... 42 3.5
36gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, com... 42 3.5
37gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromo... 42 3.5
38dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 3.5
39emb|AL591856.26| Human DNA sequence from clone RP11-426M5 on chr... 42 3.5
40gb|AC004771.1|AC004771 Homo sapiens chromosome 17, clone hRPC.10... 42 3.5 
>ref|NM_001074856.1| Oryza sativa (japonica cultivar-group) Os11g0634200 (Os11g0634200)
           mRNA, complete cds
          Length = 1027
 Score =  137 bits (69), Expect = 8e-29
 Identities = 102/113 (90%)
 Strand = Plus / Plus

                                                                       
Query: 301 ccaagagatggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcag 360
           |||||| ||||| || ||| |||||| |||||  ||||||||||||||||||||||||||
Sbjct: 231 ccaagaaatggagagggagcagatgaggatggccatcctgaggcaagaacaaacattcag 290

                                                                
Query: 361 acaacaggttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
           |||||||||||||||| ||||| || | |||||||||||||||||||||||||
Sbjct: 291 acaacaggttcatgagctgcacagactgtaccatgttcagaaacagctgatga 343
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>dbj|AK066700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073J21, full
           insert sequence
          Length = 1028

 Score =  137 bits (69), Expect = 8e-29
 Identities = 102/113 (90%)
 Strand = Plus / Plus

                                                                       
Query: 301 ccaagagatggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcag 360
           |||||| ||||| || ||| |||||| |||||  ||||||||||||||||||||||||||
Sbjct: 232 ccaagaaatggagagggagcagatgaggatggccatcctgaggcaagaacaaacattcag 291

                                                                
Query: 361 acaacaggttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
           |||||||||||||||| ||||| || | |||||||||||||||||||||||||
Sbjct: 292 acaacaggttcatgagctgcacagactgtaccatgttcagaaacagctgatga 344
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>emb|CT834635.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA019L20, full
           insert sequence
          Length = 987

 Score =  129 bits (65), Expect = 2e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                       
Query: 301 ccaagagatggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcag 360
           |||||| ||||| || ||| |||||| |||||  ||||||||||||||| ||||||||||
Sbjct: 182 ccaagaaatggagagggagcagatgaggatggccatcctgaggcaagaagaaacattcag 241

                                                                
Query: 361 acaacaggttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
           |||||||||||||||| ||||| || | |||||||||||||||||||||||||
Sbjct: 242 acaacaggttcatgagctgcacagactgtaccatgttcagaaacagctgatga 294
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>gb|DQ245996.1| Zea mays clone 94074 mRNA sequence
          Length = 825

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 338 ctgaggcaagaacaaacattcagacaacaggttcatgagatgcaccgagtttaccatgtt 397
           |||||||||||||| ||||||||||| |||||||| ||| ||||||| || ||||| |||
Sbjct: 252 ctgaggcaagaacagacattcagacagcaggttcacgagctgcaccgcgtgtaccaggtt 311

                                        
Query: 398 cagaaacagctgatgagggagacgcagat 426
           ||||| |||||||||| | ||| ||||||
Sbjct: 312 cagaagcagctgatgatgcagatgcagat 340
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>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0039F06, complete sequence
          Length = 133022

 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 301    ccaagagatggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcag 360
              |||||| ||||| || ||| |||||| |||||  ||||||||||||||||||||||||||
Sbjct: 109426 ccaagaaatggagagggagcagatgaggatggccatcctgaggcaagaacaaacattcag 109485

                       
Query: 361    acaacaggt 369
              |||||||||
Sbjct: 109486 acaacaggt 109494



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                               
Query: 365    caggttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
              |||||||||||| ||||| || | |||||||||||||||||||||||||
Sbjct: 109596 caggttcatgagctgcacagactgtaccatgttcagaaacagctgatga 109644
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 301      ccaagagatggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcag 360
                |||||| ||||| || ||| |||||| |||||  ||||||||||||||||||||||||||
Sbjct: 24096000 ccaagaaatggagagggagcagatgaggatggccatcctgaggcaagaacaaacattcag 24095941

                         
Query: 361      acaacaggt 369
                |||||||||
Sbjct: 24095940 acaacaggt 24095932



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 365      caggttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
                |||||||||||| ||||| || | |||||||||||||||||||||||||
Sbjct: 24095830 caggttcatgagctgcacagactgtaccatgttcagaaacagctgatga 24095782
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>ref|NM_001073382.1| Oryza sativa (japonica cultivar-group) Os12g0508200 (Os12g0508200)
           mRNA, complete cds
          Length = 806

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 326 aagatggttatcctgaggcaagaacaaacattcagacaacaggttcatgagatgcaccga 385
           |||||||  ||||||| ||| ||||| |||||||||||||||||  ||||| |||| || 
Sbjct: 218 aagatggccatcctgaagcaggaacagacattcagacaacaggtcaatgagctgcatcgt 277

                                       
Query: 386 gtttaccatgttcagaaacagctgatga 413
           || ||||  |||||||| || |||||||
Sbjct: 278 gtgtaccgggttcagaagcaactgatga 305
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>dbj|AK099463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023H09, full
           insert sequence
          Length = 768

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 326 aagatggttatcctgaggcaagaacaaacattcagacaacaggttcatgagatgcaccga 385
           |||||||  ||||||| ||| ||||| |||||||||||||||||  ||||| |||| || 
Sbjct: 191 aagatggccatcctgaagcaggaacagacattcagacaacaggtcaatgagctgcatcgt 250

                                       
Query: 386 gtttaccatgttcagaaacagctgatga 413
           || ||||  |||||||| || |||||||
Sbjct: 251 gtgtaccgggttcagaagcaactgatga 278
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>dbj|AK069349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017L09, full
           insert sequence
          Length = 809

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 326 aagatggttatcctgaggcaagaacaaacattcagacaacaggttcatgagatgcaccga 385
           |||||||  ||||||| ||| ||||| |||||||||||||||||  ||||| |||| || 
Sbjct: 221 aagatggccatcctgaagcaggaacagacattcagacaacaggtcaatgagctgcatcgt 280

                                       
Query: 386 gtttaccatgttcagaaacagctgatga 413
           || ||||  |||||||| || |||||||
Sbjct: 281 gtgtaccgggttcagaagcaactgatga 308
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>gb|AC138790.2| Mus musculus BAC clone RP23-292H23 from chromosome 19, complete sequence
          Length = 197765

 Score = 50.1 bits (25), Expect = 0.014
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 104    acctgcttgctccttgcttgcttgcttgc 132
              ||||||||||| |||||||||||||||||
Sbjct: 102754 acctgcttgctgcttgcttgcttgcttgc 102782
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.057
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 326      aagatggttatcctgaggcaagaacaaacattcagacaacaggt 369
                |||||||  ||||||| ||| ||||| |||||||||||||||||
Sbjct: 19560275 aagatggccatcctgaagcaggaacagacattcagacaacaggt 19560232
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 48.1 bits (24), Expect = 0.057
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 326   aagatggttatcctgaggcaagaacaaacattcagacaacaggt 369
             |||||||  ||||||| ||| ||||| |||||||||||||||||
Sbjct: 92456 aagatggccatcctgaagcaggaacagacattcagacaacaggt 92413
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>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete
             sequence
          Length = 213720

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 106   ctgcttgctccttgcttgcttgcttgc 132
             ||||||||| |||||||||||||||||
Sbjct: 91239 ctgcttgctgcttgcttgcttgcttgc 91213
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>gb|AC147045.2| Mus musculus BAC clone RP23-100E5 from chromosome 16, complete sequence
          Length = 191975

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 163    aaacaaactgtaactgtaagaga 185
              |||||||||||||||||||||||
Sbjct: 116302 aaacaaactgtaactgtaagaga 116324
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>gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, complete sequence
          Length = 196580

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 163    aaacaaactgtaactgtaagaga 185
              |||||||||||||||||||||||
Sbjct: 190011 aaacaaactgtaactgtaagaga 189989
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>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 107    tgcttgctccttgcttgcttgcttgc 132
              |||||||| |||||||||||||||||
Sbjct: 157441 tgcttgctgcttgcttgcttgcttgc 157466
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>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence
          Length = 227492

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 531    gcacccctgcctctgctgcaga 552
              ||||||||||||||||||||||
Sbjct: 174356 gcacccctgcctctgctgcaga 174377
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>gb|AC157919.5| Mus musculus chromosome 3, clone RP23-131B7, complete sequence
          Length = 190453

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 531    gcacccctgcctctgctgcaga 552
              ||||||||||||||||||||||
Sbjct: 149359 gcacccctgcctctgctgcaga 149338
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>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
              complete sequence
          Length = 151836

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 107    tgcttgctccttgcttgcttgcttgc 132
              |||||||| |||||||||||||||||
Sbjct: 129111 tgcttgcttcttgcttgcttgcttgc 129086
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>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence
          Length = 253824

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 107   tgcttgctccttgcttgcttgcttgc 132
             |||||||| |||||||||||||||||
Sbjct: 43686 tgcttgctgcttgcttgcttgcttgc 43711
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>gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, complete sequence
          Length = 149156

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Plus

                                               
Query: 100   gccgacctgcttgctc-cttgcttgcttgcttgc 132
             |||||||||||||||  |||||||||||||||||
Sbjct: 94871 gccgacctgcttgcttgcttgcttgcttgcttgc 94904
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>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete
              sequence
          Length = 212717

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 107    tgcttgctccttgcttgcttgcttgc 132
              |||||||| |||||||||||||||||
Sbjct: 108957 tgcttgctgcttgcttgcttgcttgc 108982



 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 107    tgcttgctccttgcttgcttgcttgc 132
              |||||||| |||||||||||||||||
Sbjct: 108976 tgcttgctgcttgcttgcttgcttgc 109001
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>gb|AY112039.1| Zea mays CL5155_1 mRNA sequence
          Length = 790

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 85/106 (80%)
 Strand = Plus / Minus

                                                                       
Query: 308 atggacagagaggagatgaagatggttatcctgaggcaagaacaaacattcagacaacag 367
           |||||||| ||| |||||| |||||  |||||||  |||||||  |  ||||||||||||
Sbjct: 699 atggacagggagcagatgaggatggccatcctgaaccaagaacggatcttcagacaacag 640

                                                         
Query: 368 gttcatgagatgcaccgagtttaccatgttcagaaacagctgatga 413
           || || ||| |||||||  | ||||| |  ||||| ||||||||||
Sbjct: 639 gtacacgagctgcaccggctgtaccacgcccagaagcagctgatga 594
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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 107   tgcttgctccttgcttgcttgcttgc 132
             |||||||| |||||||||||||||||
Sbjct: 61400 tgcttgctgcttgcttgcttgcttgc 61375
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>gb|AC130815.4| Mus musculus BAC clone RP23-19E7 from 16, complete sequence
          Length = 195188

 Score = 44.1 bits (22), Expect = 0.89
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 107    tgcttgctccttgcttgcttgcttgc 132
              |||||||| |||||||||||||||||
Sbjct: 108489 tgcttgcttcttgcttgcttgcttgc 108464
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>ref|XM_001016255.1| Tetrahymena thermophila SB210 hypothetical protein
           (TTHERM_00125760) mRNA, complete cds
          Length = 870

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 839 gatttcagagaatgaagaaga 859
           |||||||||||||||||||||
Sbjct: 27  gatttcagagaatgaagaaga 7
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>ref|XM_001016253.1| Tetrahymena thermophila SB210 hypothetical protein
           (TTHERM_00125740) mRNA, complete cds
          Length = 870

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 839 gatttcagagaatgaagaaga 859
           |||||||||||||||||||||
Sbjct: 27  gatttcagagaatgaagaaga 7
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>emb|CT009735.1| Triticum aestivum
          Length = 187340

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 841    tttcagagaatgaagaagaga 861
              |||||||||||||||||||||
Sbjct: 161668 tttcagagaatgaagaagaga 161648
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>gb|AC182660.2| Populus trichocarpa clone Pop1-125N19, complete sequence
          Length = 99621

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   cttgcttgcttgcttgcatct 136
             |||||||||||||||||||||
Sbjct: 68345 cttgcttgcttgcttgcatct 68365
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>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence
          Length = 238126

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 106    ctgcttgctccttgcttgcttgctt 130
              ||||||||| |||||||||||||||
Sbjct: 111446 ctgcttgctgcttgcttgcttgctt 111422
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>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence
          Length = 225732

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    cttgcttgcttgcttgcatct 136
              |||||||||||||||||||||
Sbjct: 117186 cttgcttgcttgcttgcatct 117206
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>gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186298

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   cttgcttgcttgcttgcatct 136
             |||||||||||||||||||||
Sbjct: 31926 cttgcttgcttgcttgcatct 31906
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>gb|AC159890.2| Mus musculus BAC clone RP24-80J11 from chromosome 9, complete sequence
          Length = 226770

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   cttgctccttgcttgcttgct 129
             |||||||||||||||||||||
Sbjct: 47070 cttgctccttgcttgcttgct 47090
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>gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, complete sequence
          Length = 178917

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 347    gaacaaacattcagacaacag 367
              |||||||||||||||||||||
Sbjct: 103381 gaacaaacattcagacaacag 103401
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>gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, complete sequence
          Length = 174588

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 347    gaacaaacattcagacaacag 367
              |||||||||||||||||||||
Sbjct: 172323 gaacaaacattcagacaacag 172303
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>gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, complete sequence
          Length = 171309

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 533    acccctgcctctgctgcagaa 553
              |||||||||||||||||||||
Sbjct: 168825 acccctgcctctgctgcagaa 168845
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>gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromosome unknown, complete
             sequence
          Length = 159245

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   gaacaaacattcagacaacag 367
             |||||||||||||||||||||
Sbjct: 61570 gaacaaacattcagacaacag 61550
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>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284,
             complete sequence
          Length = 92675

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   acagagaggagatgaagatgg 332
             |||||||||||||||||||||
Sbjct: 37639 acagagaggagatgaagatgg 37619
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>emb|AL591856.26| Human DNA sequence from clone RP11-426M5 on chromosome 22, complete
              sequence
          Length = 179693

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 349    acaaacattcagacaacaggt 369
              |||||||||||||||||||||
Sbjct: 128868 acaaacattcagacaacaggt 128848
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>gb|AC004771.1|AC004771 Homo sapiens chromosome 17, clone hRPC.1050_D_4, complete sequence
          Length = 91927

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 533   acccctgcctctgctgcagaa 553
             |||||||||||||||||||||
Sbjct: 81930 acccctgcctctgctgcagaa 81910


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 167,977,177
Number of extensions: 9255488
Number of successful extensions: 249199
Number of sequences better than 10.0: 40
Number of HSP's gapped: 249190
Number of HSP's successfully gapped: 43
Length of query: 930
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 907
Effective length of database: 18,503,978,556
Effective search space: 16783108550292
Effective search space used: 16783108550292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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