ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf125i05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059964:Os07g0462200 | 112 | 3e-25 | 2 | AK106193:Os04g0678200 | 60 | 2e-09 | 3 | AK104141:Os09g0281300 | 60 | 3e-09 | 4 | AK072565:Os09g0281300 | 60 | 3e-09 | 5 | Os04g0678100:Os04g0678100 | 54 | 1e-07 | 6 | Os10g0495900:Os10g0495900 | 53 | 3e-07 | 7 | AK068711:Os08g0261100 | 52 | 6e-07 | 8 | AK107442:Os02g0707500 | 33 | 0.35 | 9 | AK108072:Os02g0745400 | 30 | 2.3 | 10 | AK072229:Os02g0745400 | 30 | 2.3 | 11 | Os12g0165600:Os12g0165600 | 29 | 3.9 | 12 | Os04g0184500:Os04g0184500 | 29 | 5.1 | 13 | AK111711:Os03g0799900 | 28 | 6.7 | 14 | Os04g0174900:Os04g0174900 | 28 | 8.7 | 15 | AK109766:Os05g0582600 | 28 | 8.7 | 16 | AK102595:Os12g0126800 | 28 | 8.7 | 17 | AK063914:Os11g0130100 | 28 | 8.7 |
|---|
>AK059964:Os07g0462200 | Length = 185 Score = 112 bits (281), Expect = 3e-25 Identities = 53/74 (71%), Positives = 59/74 (79%) Frame = +2 Query: 308 GSVRNAYHTRYRGIFNGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAAGG 487 GS+RNAYHTRYRG+F G+ +SCET+RKGV ILSEFYY+SYSKSRDAAGG Sbjct: 112 GSIRNAYHTRYRGMFVGESVSCETVRKGVFAAGAAFTFFTAILSEFYYVSYSKSRDAAGG 171 Query: 488 APYGGSTIGMGTYS 529 APYGGS IGMGTYS Sbjct: 172 APYGGSNIGMGTYS 185 Score = 95.9 bits (237), Expect = 3e-20 Identities = 48/57 (84%), Positives = 51/57 (89%) Frame = +3 Query: 93 MASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 MASIIV S LLL++IAFGLAVAAEQRRSKATVTPD K YDYCVYDSD+ATGYGVG Sbjct: 1 MASIIVLASVLLLDVIAFGLAVAAEQRRSKATVTPDSEKLYDYCVYDSDIATGYGVG 57
>AK106193:Os04g0678200 | Length = 183 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/57 (54%), Positives = 40/57 (70%) Frame = +3 Query: 93 MASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 MASII+ V +L+ +AF LA+ AE+RRS AT + D + YCVY SD ATGYG+G Sbjct: 1 MASIILVVVVFVLDALAFVLAIGAEKRRSTATFSEDTSGR-QYCVYSSDAATGYGIG 56 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/70 (38%), Positives = 36/70 (51%) Frame = +2 Query: 308 GSVRNAYHTRYRGIFNGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAAGG 487 GSVRNAYHT+Y + P C LRKGV + +E +Y+ ++K+R AA Sbjct: 111 GSVRNAYHTKYSTLVISGPPRCAMLRKGVFAAGAAFTFLTALFAELHYLFFAKARHAAAV 170 Query: 488 APYGGSTIGM 517 P IGM Sbjct: 171 PPPIVGGIGM 180
>AK104141:Os09g0281300 | Length = 190 Score = 59.7 bits (143), Expect = 3e-09 Identities = 29/56 (51%), Positives = 40/56 (71%) Frame = +3 Query: 96 ASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 +SI+V + + L L AFG A+AAE+RRS ++ D + +CVYDSD+ATGYGVG Sbjct: 7 SSILVHILVIALCLTAFGFAIAAERRRSTGSIVTD-SFNSTFCVYDSDIATGYGVG 61 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/58 (39%), Positives = 33/58 (56%) Frame = +2 Query: 308 GSVRNAYHTRYRGIFNGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAA 481 G+ +NAYHTRYR + +CE+LRKGV IL+ ++Y+ Y+KS A Sbjct: 116 GATKNAYHTRYRHMVYVGSWTCESLRKGVFIAGAVFVVFTMILNVYFYMYYTKSTSQA 173
>AK072565:Os09g0281300 | Length = 190 Score = 59.7 bits (143), Expect = 3e-09 Identities = 29/56 (51%), Positives = 40/56 (71%) Frame = +3 Query: 96 ASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 +SI+V + + L L AFG A+AAE+RRS ++ D + +CVYDSD+ATGYGVG Sbjct: 7 SSILVHILVIALCLTAFGFAIAAERRRSTGSIVTD-SFNSTFCVYDSDIATGYGVG 61 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/58 (39%), Positives = 33/58 (56%) Frame = +2 Query: 308 GSVRNAYHTRYRGIFNGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAA 481 G+ +NAYHTRYR + +CE+LRKGV IL+ ++Y+ Y+KS A Sbjct: 116 GATKNAYHTRYRHMVYVGSWTCESLRKGVFIAGAVFVVFTMILNVYFYMYYTKSTSQA 173
>Os04g0678100:Os04g0678100 | Length = 99 Score = 54.3 bits (129), Expect = 1e-07 Identities = 27/57 (47%), Positives = 36/57 (63%) Frame = +3 Query: 93 MASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 MASII+ +L+++AF LA+ AE+RR+ A YCVY SD ATGYG+G Sbjct: 1 MASIIILAVVFVLDVLAFVLAIGAEKRRNTAAYVNVDQNARPYCVYGSDAATGYGIG 57
>Os10g0495900:Os10g0495900 | Length = 183 Score = 52.8 bits (125), Expect = 3e-07 Identities = 24/45 (53%), Positives = 32/45 (71%) Frame = +3 Query: 123 LLLNLIAFGLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYG 257 L+++++AFGLA+AAEQ R A V D +E+ YCVY D ATG G Sbjct: 12 LVVDVVAFGLAIAAEQSRPSARVETDARQEWTYCVYRPDAATGLG 56 Score = 52.8 bits (125), Expect = 3e-07 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +2 Query: 308 GSVRNAYHTRYRGIFNGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAAGG 487 G V++AYHTRYR +F +P CET+R+G +L+ YY +SKSR + Sbjct: 113 GLVQSAYHTRYRKVFFENPPDCETVRRGTFGAGAAFSLITCVLTGAYYFYFSKSRVSYAR 172 Query: 488 APYGGSTIGMGTYS 529 +TIGM YS Sbjct: 173 RE---ATIGMSPYS 183
>AK068711:Os08g0261100 | Length = 199 Score = 52.0 bits (123), Expect = 6e-07 Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Frame = +3 Query: 96 ASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTPDLAKEYD---YCVYDSDVATGYGV 260 AS+ + LNL AF LAV AE+RRS V PD EYD YC+YD+D +T YGV Sbjct: 10 ASLALAALLAFLNLFAFLLAVGAERRRSTGKVVPD---EYDLRSYCLYDTDASTVYGV 64 Score = 49.7 bits (117), Expect = 3e-06 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +2 Query: 308 GSVRNAYHTRYRGIF-NGDPLSCETLRKGVXXXXXXXXXXXXILSEFYYISYSKSRDAAG 484 GSVRNAYHT+Y G + D ++C TLRKGV + S YY SY SR A G Sbjct: 117 GSVRNAYHTKYLGYYMKHDLVTCATLRKGVFAAAAALMLINLLASLMYYWSY--SRAATG 174 Query: 485 GAPYGGSTIGM 517 G + +GM Sbjct: 175 GFIKHQNEVGM 185
>AK107442:Os02g0707500 | Length = 84 Score = 32.7 bits (73), Expect = 0.35 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = -3 Query: 547 PALSSLTVSAHADGGAAV--WSATGGI-PGFGVADVVELAEDGREEGEGCTGSEDTLAQR 377 P +++ A GGA W + PG G DV ++ G+E G+G G E+ + Sbjct: 5 PRVATAKARAPWSGGAPCGWWRPNRAVTPGGGAGDVPAMSWMGKERGKGVLGMENPILPS 64 Query: 376 LAREW 362 ++ +W Sbjct: 65 ISEDW 69
>AK108072:Os02g0745400 | Length = 493 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 390 PLRSVSQESGSPLKIPLYRVWYALRTDPASKH 295 P R V +P+ +P +RVW+A R P H Sbjct: 232 PARHVFHVVTAPMYLPAFRVWFARRPPPLGTH 263
>AK072229:Os02g0745400 | Length = 493 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 390 PLRSVSQESGSPLKIPLYRVWYALRTDPASKH 295 P R V +P+ +P +RVW+A R P H Sbjct: 232 PARHVFHVVTAPMYLPAFRVWFARRPPPLGTH 263
>Os12g0165600:Os12g0165600 | Length = 700 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = +3 Query: 111 QVSALLLNLIAF----GLAVAAEQRRSKATVTPDLAKEYDYCVYDSDVATGYGVG 263 +V+A+L +AF LA+ + R KAT + E D CV + V G GVG Sbjct: 198 RVTAVLHRAMAFLEDEFLALLDDPRVPKATTFDQVQHEVDRCVLPASVDVGAGVG 252
>Os04g0184500:Os04g0184500 | Length = 213 Score = 28.9 bits (63), Expect = 5.1 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 106 MMDAIALSHSVSLFPGLLALLGRKVRCGAGAAMSL 2 + D IA ++ G LALLG VRC AG A L Sbjct: 102 LKDNIATRDRLNTTAGSLALLGSVVRCDAGVAARL 136
>AK111711:Os03g0799900 | Length = 267 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -3 Query: 538 SSLTVSAHADGGAAVWSATGGIPGFGVADVVELAEDGREEGEGCTGSED 392 S L VS DG A +W+ G P +V L+ E+ E C S D Sbjct: 172 SELLVSTSTDGSARIWNIDEGAP------LVNLSRSSDEKIECCCFSRD 214
>Os04g0174900:Os04g0174900 | Length = 309 Score = 28.1 bits (61), Expect = 8.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 490 SATGGIPGFGVADVVELAEDGREEGEGCTGSEDTLAQRLARE 365 +A GG P DV +++ DGR++ EG S +A L+ E Sbjct: 73 TAFGGFPCTAWFDVEDISVDGRDDIEGLDASAAHIANLLSSE 114
>AK109766:Os05g0582600 | Length = 451 Score = 28.1 bits (61), Expect = 8.7 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -3 Query: 526 VSAHADGGAAVWSATGGIPGFGVAD--VVELAEDGREEGEGCTGSEDTLAQRLAREWV 359 ++A D G AVW + GG+ G+ +V +A G G S+ +AQ + +WV Sbjct: 385 LAAFQDAGRAVWRSGGGLAGYVQRHDALVHVAVYG--AGHFVPYSQGRVAQEMIEDWV 440
>AK102595:Os12g0126800 | Length = 585 Score = 28.1 bits (61), Expect = 8.7 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +3 Query: 18 PAPHLTFLPSRASNPGNKETE*ERAMASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTP 197 P T LP+ +S G++ + AMA + +SA L + ++AAEQ R+ + + Sbjct: 353 PLHPATSLPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSG 412 Query: 198 DLA 206 DL+ Sbjct: 413 DLS 415
>AK063914:Os11g0130100 | Length = 431 Score = 28.1 bits (61), Expect = 8.7 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +3 Query: 18 PAPHLTFLPSRASNPGNKETE*ERAMASIIVQVSALLLNLIAFGLAVAAEQRRSKATVTP 197 P T LP+ +S G++ + AMA + +SA L + ++AAEQ R+ + + Sbjct: 199 PLHPATSLPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSG 258 Query: 198 DLA 206 DL+ Sbjct: 259 DLS 261 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,699,334 Number of extensions: 513419 Number of successful extensions: 1604 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1600 Number of HSP's successfully gapped: 23 Length of query: 300 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 200 Effective length of database: 11,395,755 Effective search space: 2279151000 Effective search space used: 2279151000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
