>P80611:UC05_MAIZE Unknown protein from 2D-PAGE of etiolated coleoptile - Zea mays|
           (Maize)
          Length = 28
 Score = 40.4 bits (93), Expect = 0.018
 Identities = 20/37 (54%), Positives = 22/37 (59%)
 Frame = +2

Query: 503 DHGGVHDGTTVVLWEWAKGDNQSWKILPWGEEAYAGG 613
           DH GV DGT +VL           KILPWG+EAYA G
Sbjct: 1   DHPGVRDGTNIVLX----------KILPWGDEAYAAG 27

>P28350:SYV_NEUCR Valyl-tRNA synthetase, mitochondrial precursor - Neurospora crassa|
          Length = 1093

 Score = 36.2 bits (82), Expect = 0.34
 Identities = 23/107 (21%), Positives = 47/107 (43%)
 Frame = +2

Query: 674  DEGFSATVRNGTVVLAPSNPRDEYQHWFKDMRHSNRIKDEEGYPAFALINKVTGEALKHS 853
            DE     + N   +L+   P +E Q   + + H+  +     +P    I +   + L   
Sbjct: 849  DELCDVFIENSKGILSDGTP-EEQQSVQQTLYHALDVALRLLHPIMPYITEELWQRLPRK 907

Query: 854  QGEGHPVKLVPYNPNYQDESVLWTESRDVGAGFRCIRMVNNIYLNFD 994
            QG+G  + L PY P ++ +    TE+ D   G +C   + ++  +++
Sbjct: 908  QGDGETIMLAPY-PAFESQLEFATEAEDYELGLKCAGGIRSLAADYN 953

>Q5EA41:GALT6_BOVIN Polypeptide N-acetylgalactosaminyltransferase 6 - Bos taurus|
           (Bovine)
          Length = 622

 Score = 34.3 bits (77), Expect = 1.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 170 GYCLSVRDGNVVLAPSNPRDEHQHW 244
           G CL+ +D   V+A  NP D HQHW
Sbjct: 595 GTCLTSKDKKPVMATCNPSDPHQHW 619

>Q9C0J8:WDR33_HUMAN WD repeat protein 33 - Homo sapiens (Human)|
          Length = 1336

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +1

Query: 757 QGHEAQQPHQGRGRLPGLRPHQQGDRRGPQALPRRGPPCEAGAIQPQ-LPGRVGVVD*EP 933
           QG    Q H G    PG + H      GPQ     GPP   G + PQ  PG  G+     
Sbjct: 696 QGSSGPQGHMGPQGPPGPQSHI-----GPQ-----GPPGPQGHLGPQGPPGTQGMQGPPG 745

Query: 934 RRGRRLQVHPHGEQHLP 984
            RG +   HPHG Q  P
Sbjct: 746 PRGMQGPPHPHGIQGGP 762

>P79385:MFGM_PIG Lactadherin - Sus scrofa (Pig)|
          Length = 409

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 824 KVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGA 946
           +VTG   + ++  GH   +  Y   Y D+ V WTE RD GA
Sbjct: 320 RVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGA 360

>Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 - Mus musculus (Mouse)|
          Length = 493

 Score = 32.7 bits (73), Expect = 3.8
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 12/69 (17%)
 Frame = +1

Query: 745 PALVQGHEAQQPHQGRGRLPGLRPH------------QQGDRRGPQALPRRGPPCEAGAI 888
           PA   GH +  P   R R+P  RP                 R  P +L  RG P   GA 
Sbjct: 152 PAPSPGHRSGPPEPPRNRMPPPRPDVGSKPDSLPPPVPNTPRPVPSSLHNRGSPAGLGAP 211

Query: 889 QPQLPGRVG 915
           +P  PG  G
Sbjct: 212 RPPFPGNRG 220

>Q6IN36:WIPF1_RAT WAS/WASL-interacting protein family member 1 - Rattus norvegicus|
           (Rat)
          Length = 487

 Score = 32.3 bits (72), Expect = 4.9
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 12/69 (17%)
 Frame = +1

Query: 745 PALVQGHEAQQPHQGRGRLPGLRPH------------QQGDRRGPQALPRRGPPCEAGAI 888
           PA   GH +  P   R R+P  RP                 R  P +L  RG P   GA 
Sbjct: 147 PAPSPGHRSGPPEPPRNRMPPPRPDVGSKPDSLPPPVPNTPRPIPSSLHNRGSPAGLGAP 206

Query: 889 QPQLPGRVG 915
           +P  PG  G
Sbjct: 207 RPPFPGNRG 215

>Q8ZRP0:YAET_SALTY Outer membrane protein assembly factor yaeT precursor - Salmonella|
           typhimurium
          Length = 804

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 28/84 (33%), Positives = 34/84 (40%)
 Frame = +2

Query: 497 DKDHGGVHDGTTVVLWEWAKGDNQSWKILPWGEEAYAGGSANAPRGGSSEPTVRIFCKAD 676
           D DH  V  G T     W  GD    K +P+ E  YAGGS+          TVR F    
Sbjct: 618 DNDHKWVVLGRT----RWGYGDGLGGKEMPFYENFYAGGSS----------TVRGFQSNT 663

Query: 677 EGFSATVRNGTVVLAPSNPRDEYQ 748
            G  A  +NG       N  D+Y+
Sbjct: 664 IGPKAVYKNGAHTSWDDN--DDYE 685

>Q5PD65:YAET_SALPA Outer membrane protein assembly factor yaeT precursor - Salmonella|
           paratyphi-a
          Length = 803

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 28/84 (33%), Positives = 34/84 (40%)
 Frame = +2

Query: 497 DKDHGGVHDGTTVVLWEWAKGDNQSWKILPWGEEAYAGGSANAPRGGSSEPTVRIFCKAD 676
           D DH  V  G T     W  GD    K +P+ E  YAGGS+          TVR F    
Sbjct: 617 DNDHKWVVLGRT----RWGYGDGLGGKEMPFYENFYAGGSS----------TVRGFQSNT 662

Query: 677 EGFSATVRNGTVVLAPSNPRDEYQ 748
            G  A  +NG       N  D+Y+
Sbjct: 663 IGPKAVYKNGAHTSWDDN--DDYE 684

>P02810:PRPC_HUMAN Salivary acidic proline-rich phosphoprotein 1/2 precursor - Homo|
           sapiens (Human)
          Length = 166

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 24/65 (36%), Positives = 30/65 (46%)
 Frame = +1

Query: 778 PHQGRGRLPGLRPHQQGDRRGPQALPRRGPPCEAGAIQPQLPGRVGVVD*EPRRGRRLQV 957
           P QGR + P   P Q G  R P+  P+ GPP + G  Q   P   G     P +G R Q 
Sbjct: 103 PPQGRPQGP---PQQGGHPRPPRGRPQ-GPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158

Query: 958 HPHGE 972
            P G+
Sbjct: 159 PPQGQ 163

>Q8Z9A3:YAET_SALTI Outer membrane protein assembly factor yaeT precursor - Salmonella|
           typhi
          Length = 803

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 25/70 (35%), Positives = 29/70 (41%)
 Frame = +2

Query: 497 DKDHGGVHDGTTVVLWEWAKGDNQSWKILPWGEEAYAGGSANAPRGGSSEPTVRIFCKAD 676
           D DH  V  G T     W  GD    K +P+ E  YAGGS+          TVR F    
Sbjct: 617 DNDHKWVVLGRT----RWGYGDGLGGKEMPFYENFYAGGSS----------TVRGFQSNT 662

Query: 677 EGFSATVRNG 706
            G  A  +NG
Sbjct: 663 IGPKAVYKNG 672

>Q95114:MFGM_BOVIN Lactadherin precursor - Bos taurus (Bovine)|
          Length = 427

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 824 KVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGA 946
           +VTG   + ++  GH   +  Y   Y D+ V WTE +D GA
Sbjct: 338 RVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGA 378


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 193,827,428
Number of extensions: 4274481
Number of successful extensions: 13622
Number of sequences better than 10.0: 12
Number of HSP's gapped: 13592
Number of HSP's successfully gapped: 12
Length of query: 468
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 351
Effective length of database: 68,593,924
Effective search space: 24076467324
Effective search space used: 24076467324
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)