ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf125f22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY256682:Os06g0493100 | 51 | 7e-07 | 2 | AK063797:Os06g0493100 | 51 | 7e-07 | 3 | AK110850:Os05g0161700 | 32 | 0.32 | 4 | AK120968:Os01g0598600 | 31 | 0.94 | 5 | AK101038:Os01g0598600 | 31 | 0.94 | 6 | Y14825:Os10g0569400 | 30 | 1.2 | 7 | AK119942:Os12g0571500 | 30 | 1.2 | 8 | AK062449:Os10g0569400 | 30 | 1.2 | 9 | AK110983:Os05g0150400 | 28 | 6.1 | 10 | Os04g0691800:Os04g0691800 | 28 | 8.0 | 11 | D21114:Os05g0445500 | 28 | 8.0 | 12 | AK121459:Os05g0445500 | 28 | 8.0 | 13 | AK104115:Os03g0137600 | 28 | 8.0 | 14 | AK099311:Os03g0137600 | 28 | 8.0 | 15 | AK061189:Os03g0137600 | 28 | 8.0 | 16 | AK058690:Os03g0137600 | 28 | 8.0 |
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>AY256682:Os06g0493100 | Length = 82 Score = 51.2 bits (121), Expect = 7e-07 Identities = 29/67 (43%), Positives = 35/67 (52%) Frame = +3 Query: 78 RAARFLVLLQIALFVISAVIISGPVCNGARPGLGGGALDPGSPVCVGGRCAPSGQPYTRP 257 RA LVL+QI + V VI+S + G G LDP PVCVGG C G PYT P Sbjct: 5 RATTLLVLMQI-IMVFYTVILSCSFSDARTFPGGEGGLDPNHPVCVGGACPTPGLPYTNP 63 Query: 258 GCGTVYK 278 +Y+ Sbjct: 64 RDPCIYR 70
>AK063797:Os06g0493100 | Length = 82 Score = 51.2 bits (121), Expect = 7e-07 Identities = 29/67 (43%), Positives = 35/67 (52%) Frame = +3 Query: 78 RAARFLVLLQIALFVISAVIISGPVCNGARPGLGGGALDPGSPVCVGGRCAPSGQPYTRP 257 RA LVL+QI + V VI+S + G G LDP PVCVGG C G PYT P Sbjct: 5 RATTLLVLMQI-IMVFYTVILSCSFSDARTFPGGEGGLDPNHPVCVGGACPTPGLPYTNP 63 Query: 258 GCGTVYK 278 +Y+ Sbjct: 64 RDPCIYR 70
>AK110850:Os05g0161700 | Length = 165 Score = 32.3 bits (72), Expect = 0.32 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 145 PLMITAEMTKRAIWRSTRKRAALAKNPMEW 56 PL + AEMT +IWRS R+ A + +W Sbjct: 10 PLTMPAEMTSASIWRSAREAATTSARETDW 39
>AK120968:Os01g0598600 | Length = 500 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +3 Query: 123 ISAVIISGPVCNGARPGLGGGALDPGSPVCVGGRCAPSGQPYTRPGCGT 269 ISA NG R G GGG +PV V G SG+ +T+ G GT Sbjct: 108 ISAAAGGAAAANGTRVGGGGGGSGFVAPV-VSGLAQGSGEYFTKIGVGT 155
>AK101038:Os01g0598600 | Length = 500 Score = 30.8 bits (68), Expect = 0.94 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +3 Query: 123 ISAVIISGPVCNGARPGLGGGALDPGSPVCVGGRCAPSGQPYTRPGCGT 269 ISA NG R G GGG +PV V G SG+ +T+ G GT Sbjct: 108 ISAAAGGAAAANGTRVGGGGGGSGFVAPV-VSGLAQGSGEYFTKIGVGT 155
>Y14825:Os10g0569400 | Length = 107 Score = 30.4 bits (67), Expect = 1.2 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Frame = +3 Query: 36 NHSPNELHSMGFFARAARFLVLLQIALFVISAVIISGPVCNGARPGLGGGALDPGSPVC- 212 + SP S + L+L+ + + V + G A GG L+P P Sbjct: 6 SRSPCSSSSSAAVVSLCKVLLLVLALICTLETVSVEGGRVAAAALVGGGVPLNPRYPAIP 65 Query: 213 ----VGGRCAP----SGQPYTRP--GCGTVYKC 281 +G R P G+PYTRP GC Y C Sbjct: 66 EEPYIGRRGDPYTGRGGEPYTRPGRGCTVAYGC 98
>AK119942:Os12g0571500 | Length = 143 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Frame = +3 Query: 159 GARPGLGGGALDPGSPVCV-GGRCAPSGQPYTRP 257 G G G L P C G CA G+PYTRP Sbjct: 98 GGGGGFSYGCLSRARPACPRAGGCAARGRPYTRP 131
>AK062449:Os10g0569400 | Length = 107 Score = 30.4 bits (67), Expect = 1.2 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Frame = +3 Query: 36 NHSPNELHSMGFFARAARFLVLLQIALFVISAVIISGPVCNGARPGLGGGALDPGSPVC- 212 + SP S + L+L+ + + V + G A GG L+P P Sbjct: 6 SRSPCSSSSSAAVVSLCKVLLLVLALICTLETVSVEGGRVAAAALVGGGVPLNPRYPAIP 65 Query: 213 ----VGGRCAP----SGQPYTRP--GCGTVYKC 281 +G R P G+PYTRP GC Y C Sbjct: 66 EEPYIGRRGDPYTGRGGEPYTRPGRGCTVAYGC 98
>AK110983:Os05g0150400 | Length = 593 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 5 RSANSPEGSNKPQPK-RAPLHGVLR-QSRAFPGAPPDRSLRHL 127 +S+N P PK A +G L Q A+P PP++++ H+ Sbjct: 204 QSSNRPSSRRPSYPKSNASFYGRLHLQKHAYPSVPPEQAMYHM 246
>Os04g0691800:Os04g0691800 | Length = 1021 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +2 Query: 5 RSANSPEGSNKPQPKRAPLHGVLRQSRAFPGAPPDRSLRHLCRDHQRPRLQRSTP 169 +S ++ + ++P P A HG Q++A P P S DH+ PR+ RS P Sbjct: 155 QSVSAEQPDSRPPP--AFPHGEA-QAQAQPPPPESESKGKTTHDHEPPRVFRSVP 206
>D21114:Os05g0445500 | Length = 95 Score = 27.7 bits (60), Expect = 8.0 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +3 Query: 48 NELHSMGFFARAARFLVLL-QIALFVISAVIISGPVCNGARPGLGGGALDPGSPVCVGGR 224 N L S+G A R LL ++ I+ VI +G + P GGG + +P GG Sbjct: 25 NILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGGGGIAVAAPTAAGGG 84 Query: 225 CAPS 236 AP+ Sbjct: 85 AAPA 88
>AK121459:Os05g0445500 | Length = 113 Score = 27.7 bits (60), Expect = 8.0 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +3 Query: 48 NELHSMGFFARAARFLVLL-QIALFVISAVIISGPVCNGARPGLGGGALDPGSPVCVGGR 224 N L S+G A R LL ++ I+ VI +G + P GGG + +P GG Sbjct: 25 NILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGGGGIAVAAPTAAGGG 84 Query: 225 CAPS 236 AP+ Sbjct: 85 AAPA 88
>AK104115:Os03g0137600 | Length = 251 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 5 RSANSPEGSNKPQPKRAPLHGVLRQSRAFPGAPPDR 112 R P G+ P P+RA L R A PP R Sbjct: 25 RGPRRPAGAVPPTPRRAALRATTRSPPAVAATPPPR 60
>AK099311:Os03g0137600 | Length = 251 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 5 RSANSPEGSNKPQPKRAPLHGVLRQSRAFPGAPPDR 112 R P G+ P P+RA L R A PP R Sbjct: 25 RGPRRPAGAVPPTPRRAALRATTRSPPAVAATPPPR 60
>AK061189:Os03g0137600 | Length = 251 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 5 RSANSPEGSNKPQPKRAPLHGVLRQSRAFPGAPPDR 112 R P G+ P P+RA L R A PP R Sbjct: 25 RGPRRPAGAVPPTPRRAALRATTRSPPAVAATPPPR 60
>AK058690:Os03g0137600 | Length = 251 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 5 RSANSPEGSNKPQPKRAPLHGVLRQSRAFPGAPPDR 112 R P G+ P P+RA L R A PP R Sbjct: 25 RGPRRPAGAVPPTPRRAALRATTRSPPAVAATPPPR 60 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,179,859 Number of extensions: 573693 Number of successful extensions: 1848 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1847 Number of HSP's successfully gapped: 16 Length of query: 236 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 138 Effective length of database: 11,475,837 Effective search space: 1583665506 Effective search space used: 1583665506 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
