No.
Definition
Score (bits)
E Value
1 ref|NM_001062931.1| Oryza sativa (japonica cultivar-group) Os05g...
456
e-124
2 dbj|AK058719.1| Oryza sativa (japonica cultivar-group) cDNA clon...
448
e-122
3 gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome...
412
e-111
4 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
412
e-111
5 dbj|AK068873.1| Oryza sativa (japonica cultivar-group) cDNA clon...
404
e-109
6 ref|NM_101583.2| Arabidopsis thaliana GTP binding / translation ...
86
7e-13
7 gb|BT001007.1| Arabidopsis thaliana At1g17220/F20D23_8 mRNA, com...
86
7e-13
8 gb|AF367343.1| Arabidopsis thaliana At1g17220/F20D23_8 mRNA, com...
86
7e-13
9 gb|AF324244.1|AF324244 Phaseolus vulgaris translation initiation...
80
4e-11
10 gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 geno...
48
0.15
11 ref|NM_001028765.2| Caenorhabditis elegans F46B6.6a (F46B6.6) mR...
48
0.15
12 emb|Z70780.2|CEF46B6 Caenorhabditis elegans Cosmid F46B6, comple...
48
0.15
13 ref|NR_002401.1| Caenorhabditis elegans F46B6.6, miscRNA
48
0.15
14 gb|CP000423.1| Lactobacillus casei ATCC 334, complete genome
46
0.58
15 gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co...
46
0.58
16 gb|AC090638.11| Homo sapiens chromosome 18, clone RP11-429H5, co...
46
0.58
17 gb|AC013759.6|AC013759 Homo sapiens chromosome 18, clone RP11-2E...
46
0.58
18 gb|AY103661.1| Zea mays PCO126844 mRNA sequence
46
0.58
19 gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, comple...
46
0.58
20 emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chr...
46
0.58
21 ref|XM_001194775.1| PREDICTED: Strongylocentrotus purpuratus sim...
44
2.3
22 ref|XM_790732.2| PREDICTED: Strongylocentrotus purpuratus simila...
44
2.3
23 ref|XM_524666.2| PREDICTED: Pan troglodytes similar to GluR7 (LO...
44
2.3
24 gb|CP000448.1| Syntrophomonas wolfei subsp. wolfei str. Goetting...
44
2.3
25 gb|CP000450.1| Nitrosomonas eutropha C71, complete genome
44
2.3
26 gb|AC099948.10| Mus musculus chromosome 10, clone RP23-19D21, co...
44
2.3
27 ref|NM_000831.2| Homo sapiens glutamate receptor, ionotropic, ka...
44
2.3
28 ref|XM_870934.1| PREDICTED: Bos taurus hypothetical protein LOC6...
44
2.3
29 gb|AY313154.1| Saccoglossus kowalevskii pax6 mRNA, complete cds
44
2.3
30 ref|NM_001004254.1| Rattus norvegicus mitochondrial translationa...
44
2.3
31 gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734...
44
2.3
32 gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, compl...
44
2.3
33 gb|BC111162.1| Bos taurus cDNA clone IMAGE:8056473
44
2.3
34 gb|AC153890.8| Mus musculus BAC RP23-403C13 (Roswell Park Cance...
44
2.3
35 emb|Z33371.1|MCABI M.capricolum DNA for CONTIG MCABI
44
2.3
36 dbj|AK116364.1| Ciona intestinalis cDNA, clone:citb036e06, full ...
44
2.3
37 gb|U16127.1|HSU16127 Human glutamate/kainate receptor subunit (E...
44
2.3
38 gb|AC192732.2| Pan troglodytes BAC clone CH251-477J23 from chrom...
42
9.1
39 emb|BX248583.1| Blochmannia floridanus complete genome
42
9.1
40 gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s...
42
9.1
41 gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome
42
9.1
42 gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete...
42
9.1
43 gb|AE002129.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect...
42
9.1
44 gb|AC003083.2| Homo sapiens BAC clone CTB-60N22 from 7, complete...
42
9.1
45 gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, comp...
42
9.1
46 gb|AC097351.2| Sus scrofa clone RP44-368D24, complete sequence
42
9.1
47 gb|AC091297.3| Sus scrofa clone RP44-52N13, complete sequence
42
9.1
48 dbj|AB206848.1| Prunus persica DNA, microsatellite marker MA053a
42
9.1
49 gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
42
9.1
50 gb|AC010711.5| Drosophila melanogaster 3L BAC RP98-22D12 (Roswel...
42
9.1
51 gb|AC091128.2| Drosophila melanogaster 3L BAC RP98-17O7 (Roswell...
42
9.1
52 gb|AC025268.8| Homo sapiens chromosome 10 clone RP11-411A19, com...
42
9.1
53 gb|AC087224.13| Homo sapiens chromosome 18, clone RP11-52C21, co...
42
9.1
54 gb|AC021036.6| Homo sapiens chromosome 10 clone RP11-420K10, com...
42
9.1
55 gb|AC009285.10| Homo sapiens chromosome 18, clone RP11-186J15, c...
42
9.1
56 gb|AC097661.3| Homo sapiens BAC clone RP11-553E15 from 4, comple...
42
9.1
57 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
9.1
58 emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 o...
42
9.1
59 emb|AL772363.15| Human DNA sequence from clone RP11-974F22 on ch...
42
9.1
60 emb|AL513282.10| Human DNA sequence from clone RP11-179G5 on chr...
42
9.1
61 emb|AL360001.33| Human DNA sequence from clone RP11-332O19 on ch...
42
9.1
62 emb|AL009050.9|HS191L6 Human DNA sequence from clone RP1-191L6 o...
42
9.1
63 emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome;...
42
9.1
64 emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...
42
9.1
65 emb|AL833369.1|HSM804682 Homo sapiens mRNA; cDNA DKFZp667F0714 (...
42
9.1
66 gb|AC068489.4| Homo sapiens BAC clone RP11-724C3 from 2, complet...
42
9.1
67 gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoieti...
42
9.1
68 dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss...
42
9.1
69 dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D...
42
9.1
70 emb|BX813315.3| Mouse DNA sequence from clone RP23-297P1 on chro...
42
9.1
71 gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q...
42
9.1
72 gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, comple...
42
9.1
73 gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s...
42
9.1
74 gb|AC000125.1|HSAC000125 Human Cosmid g1572c037 from 7q31.3, com...
42
9.1
>gb|AC098832.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 412 bits (208), Expect = e-111
Identities = 399/463 (86%), Gaps = 6/463 (1%)
Strand = Plus / Plus
Query: 1260 acaccagctggtccccgccgacgtatgccaaatgatggtcgatcagttgatgacgatgct 1319
|||||||||||||| |||||||| |||||||| ||| | | | ||||||||| ||| ||
Sbjct: 70397 acaccagctggtcctcgccgacgaatgccaaaaaatgatggtttagttgatgaggatact 70456
Query: 1320 ccagtgcgcaaaggaaggagatggagcaaggcaaaacgtagggctgccag------gcta 1373
|||||||||| || ||||||||||||||||||||||| || ||||| || |||
Sbjct: 70457 gcagtgcgcaaggggaggagatggagcaaggcaaaacgcagagctgcaagacttcagctt 70516
Query: 1374 gaggctttagaagctgaagagcctgttagggttgagatccttgaagttggtgaagaaggt 1433
||||||| | ||| ||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 70517 gaggcttcacaagttgaagagccagttagagtcgagatccttgaagttggtgaagaagga 70576
Query: 1434 atggatattgacgaattagcatatcaactggcagttggcgaatcagaaattctgcgtttt 1493
|||| ||||| ||||| ||||||||| ||||| ||| |||||||||||||||||| |||
Sbjct: 70577 atggtaattgaggaattggcatatcaattggcaattgacgaatcagaaattctgcgattt 70636
Query: 1494 ttatcagtgagaggagcaatgcttgacaatgttcagactcttgataaagatttggttaag 1553
||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 70637 ttatctgtgagaggagctatgcttgacaatgttcagacacttgataaagatctggttaag 70696
Query: 1554 atggtttgcatggaatatgaagttgaagtactggaaagtggtccagtgagagtggaagaa 1613
|||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 70697 atggtttgtatggaatatgatgtagaagtactggaaagtggtccagtgaaagtggaagag 70756
Query: 1614 atggcaaagaagaatgagttccttgatgatgaggatttggataaactggaaataaggcct 1673
|||||||||||||| || || ||||| || || |||||||| || ||||| || ||
Sbjct: 70757 atggcaaagaagaaggaatttcttgacgaggaagatttggacaagttggaagacagaccc 70816
Query: 1674 cccattgtaactatcatgggtcatgtcgatcatgggaaggtac 1716
|| ||||||||||||||||| |||||||||||||| |||||||
Sbjct: 70817 cctattgtaactatcatgggccatgtcgatcatggaaaggtac 70859
Score = 216 bits (109), Expect = 3e-52
Identities = 279/335 (83%), Gaps = 3/335 (0%)
Strand = Plus / Plus
Query: 899 gacaaaaacactaaagggtgtatggagaaaggggaaccctgtgcccactgtacataaggt 958
|||||||||||| ||| | |||||| ||||||| ||||||||| | ||||||||||||||
Sbjct: 70033 gacaaaaacacttaagagcgtatggcgaaagggaaaccctgtgtcaactgtacataaggt 70092
Query: 959 gattagagatcgtccacacactgaaactggggatcagtccatatctgctgctgaaccttc 1018
| | ||||||| ||||| | |||||| | || ||||||| | ||| | || |||||||
Sbjct: 70093 ggtcagagatcatccacgctctgaaagtaggaatcagtctagttctacagcaaaaccttc 70152
Query: 1019 agtgtcatctccatcaaaactagcacctcacctacaaacaagaccttc---tgtagcacc 1075
|| || ||||| |||||| || ||||| |||| ||||| |||||| ||||||||
Sbjct: 70153 tatgccagctccaacaaaaccagtacctcctctactaacaaaaccttcagtagtagcacc 70212
Query: 1076 accacctcgtcggcctgtcaaagctgacacatcaaaggagaaaaaaggacccatcctgat 1135
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 70213 accacctcgtcggcctgtcaaggctgatacatcaaaggagaaaaagggacccatcctgat 70272
Query: 1136 cgacaaatttgcttccaagagaccaatggttgatccagctgtagctgaggcactggtaga 1195
|| |||||||||||||| | |||||| || ||||||| |||||||| |||||| ||||
Sbjct: 70273 tgataaatttgcttccaataaaccaatagtggatccagttgtagctgcagcactgataga 70332
Query: 1196 ccctgtcaagctagtacgcggttcaccagcaaaag 1230
||||| |||| |||||| || ||||||||||||
Sbjct: 70333 acctgtaaagccagtacgaggcccaccagcaaaag 70367
Score = 194 bits (98), Expect = 1e-45
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1931 aggcgtttggtgcaatgagagctcgaggagcaaaggtaactgatatctgtatcattgttg 1990
|||| |||||||||||||||||||| || || | ||||||||||||||||||||||||||
Sbjct: 71689 aggcatttggtgcaatgagagctcggggtgctagggtaactgatatctgtatcattgttg 71748
Query: 1991 tctctgcggatgatggcgttcagccacaaacaaatgaggcaattgcgcatgcaaaggcag 2050
|||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 71749 tctctgcggatgatggtgttcgtccacaaacaaatgaggcaattgcacatgcaaaggcag 71808
Query: 2051 ccagagtccctattgtaatagctataaataaggt 2084
| ||||||||||||| ||||| ||||| |||||
Sbjct: 71809 ctggagtccctattgtgatagccataaacaaggt 71842
Score = 137 bits (69), Expect = 2e-28
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 1817 aggtggtggcatctgaagctggtggaataacgcaaggaattggagcatatcaggttcttg 1876
|||||||||||||||| ||||| |||||||| ||||| ||||| || ||||||||| |||
Sbjct: 71479 aggtggtggcatctgaggctggcggaataacacaagggattggtgcctatcaggttattg 71538
Query: 1877 tgccagttgatggaaaccctcaggcttgtgtttttcttgatactccagggcatgagg 1933
| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 71539 tacaggttgatggaaaccctcatgcttgtgtttttcttgatactccagggcacgagg 71595
Score = 105 bits (53), Expect = 7e-19
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 2084 tagacaaggagggtgctaatccagaacgagtcatgcaagaactttcccagattggactta 2143
|||||||||| || |||||| | ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 71929 tagacaaggaaggagctaatgctgaacgggtcatgcaagagctttcccaaattggactta 71988
Query: 2144 tgccagagatgtggggtggtgacaccccgatggttcaggttgtttattggcacactctgg 2203
|||||||| |||||||||||| | ||| ||| ||||||||||| ||| |||| |||||
Sbjct: 71989 tgccagaggcgtggggtggtgatatcccaatgattcaggttgttgattctcacaatctgg 72048
Query: 2204 a 2204
|
Sbjct: 72049 a 72049
Score = 79.8 bits (40), Expect = 4e-11
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2229 acttattacctattttgagctgatttagttgtgatatctgtcagataagtgctcttaagg 2288
|||| |||||||||| || ||||||||||||| || |||||||||||||||||||||| |
Sbjct: 72102 acttgttacctattt-gatctgatttagttgttatgtctgtcagataagtgctcttaatg 72160
Query: 2289 gagagaatgttgatgagctattagagac 2316
||||| ||| ||||| ||||| |||||
Sbjct: 72161 gagagggtgtagatgaactattggagac 72188
Score = 77.8 bits (39), Expect = 2e-10
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1774 ttctgtttgcagactactcttttggattatatacgcaagagcaaggt 1820
||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 70924 ttctgtttgcagactaccctgttggattatatacgcaagagcaaggt 70970
Score = 63.9 bits (32), Expect = 2e-06
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 602 tgatgacagcgatcttctttcgaagcccccgcagaggccagtccggctgaatgggccacc 661
|||||| ||||||||||||| |||||| ||||||| |||| ||||| ||||||||||||
Sbjct: 69757 tgatgatagcgatcttcttttgaagccaccgcagaagccaatccgggcgaatgggccacc 69816
Score = 58.0 bits (29), Expect = 2e-04
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 742 gggagtcattggatgaggtgttgcagaaggcagagaa 778
||||||||||||||||||||||| ||||||| |||||
Sbjct: 69882 gggagtcattggatgaggtgttggagaaggctgagaa 69918
Score = 52.0 bits (26), Expect = 0.009
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 375 cctgcttctgttaccaacctggggagcaacggaaggcc 412
|||||||||||| |||||||||||| |||||| |||||
Sbjct: 69545 cctgcttctgttgccaacctggggaccaacgggaggcc 69582
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
Length = 29737217
Score = 412 bits (208), Expect = e-111
Identities = 399/463 (86%), Gaps = 6/463 (1%)
Strand = Plus / Plus
Query: 1260 acaccagctggtccccgccgacgtatgccaaatgatggtcgatcagttgatgacgatgct 1319
|||||||||||||| |||||||| |||||||| ||| | | | ||||||||| ||| ||
Sbjct: 28435473 acaccagctggtcctcgccgacgaatgccaaaaaatgatggtttagttgatgaggatact 28435532
Query: 1320 ccagtgcgcaaaggaaggagatggagcaaggcaaaacgtagggctgccag------gcta 1373
|||||||||| || ||||||||||||||||||||||| || ||||| || |||
Sbjct: 28435533 gcagtgcgcaaggggaggagatggagcaaggcaaaacgcagagctgcaagacttcagctt 28435592
Query: 1374 gaggctttagaagctgaagagcctgttagggttgagatccttgaagttggtgaagaaggt 1433
||||||| | ||| ||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 28435593 gaggcttcacaagttgaagagccagttagagtcgagatccttgaagttggtgaagaagga 28435652
Query: 1434 atggatattgacgaattagcatatcaactggcagttggcgaatcagaaattctgcgtttt 1493
|||| ||||| ||||| ||||||||| ||||| ||| |||||||||||||||||| |||
Sbjct: 28435653 atggtaattgaggaattggcatatcaattggcaattgacgaatcagaaattctgcgattt 28435712
Query: 1494 ttatcagtgagaggagcaatgcttgacaatgttcagactcttgataaagatttggttaag 1553
||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 28435713 ttatctgtgagaggagctatgcttgacaatgttcagacacttgataaagatctggttaag 28435772
Query: 1554 atggtttgcatggaatatgaagttgaagtactggaaagtggtccagtgagagtggaagaa 1613
|||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 28435773 atggtttgtatggaatatgatgtagaagtactggaaagtggtccagtgaaagtggaagag 28435832
Query: 1614 atggcaaagaagaatgagttccttgatgatgaggatttggataaactggaaataaggcct 1673
|||||||||||||| || || ||||| || || |||||||| || ||||| || ||
Sbjct: 28435833 atggcaaagaagaaggaatttcttgacgaggaagatttggacaagttggaagacagaccc 28435892
Query: 1674 cccattgtaactatcatgggtcatgtcgatcatgggaaggtac 1716
|| ||||||||||||||||| |||||||||||||| |||||||
Sbjct: 28435893 cctattgtaactatcatgggccatgtcgatcatggaaaggtac 28435935
Score = 216 bits (109), Expect = 3e-52
Identities = 279/335 (83%), Gaps = 3/335 (0%)
Strand = Plus / Plus
Query: 899 gacaaaaacactaaagggtgtatggagaaaggggaaccctgtgcccactgtacataaggt 958
|||||||||||| ||| | |||||| ||||||| ||||||||| | ||||||||||||||
Sbjct: 28435109 gacaaaaacacttaagagcgtatggcgaaagggaaaccctgtgtcaactgtacataaggt 28435168
Query: 959 gattagagatcgtccacacactgaaactggggatcagtccatatctgctgctgaaccttc 1018
| | ||||||| ||||| | |||||| | || ||||||| | ||| | || |||||||
Sbjct: 28435169 ggtcagagatcatccacgctctgaaagtaggaatcagtctagttctacagcaaaaccttc 28435228
Query: 1019 agtgtcatctccatcaaaactagcacctcacctacaaacaagaccttc---tgtagcacc 1075
|| || ||||| |||||| || ||||| |||| ||||| |||||| ||||||||
Sbjct: 28435229 tatgccagctccaacaaaaccagtacctcctctactaacaaaaccttcagtagtagcacc 28435288
Query: 1076 accacctcgtcggcctgtcaaagctgacacatcaaaggagaaaaaaggacccatcctgat 1135
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 28435289 accacctcgtcggcctgtcaaggctgatacatcaaaggagaaaaagggacccatcctgat 28435348
Query: 1136 cgacaaatttgcttccaagagaccaatggttgatccagctgtagctgaggcactggtaga 1195
|| |||||||||||||| | |||||| || ||||||| |||||||| |||||| ||||
Sbjct: 28435349 tgataaatttgcttccaataaaccaatagtggatccagttgtagctgcagcactgataga 28435408
Query: 1196 ccctgtcaagctagtacgcggttcaccagcaaaag 1230
||||| |||| |||||| || ||||||||||||
Sbjct: 28435409 acctgtaaagccagtacgaggcccaccagcaaaag 28435443
Score = 194 bits (98), Expect = 1e-45
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1931 aggcgtttggtgcaatgagagctcgaggagcaaaggtaactgatatctgtatcattgttg 1990
|||| |||||||||||||||||||| || || | ||||||||||||||||||||||||||
Sbjct: 28436765 aggcatttggtgcaatgagagctcggggtgctagggtaactgatatctgtatcattgttg 28436824
Query: 1991 tctctgcggatgatggcgttcagccacaaacaaatgaggcaattgcgcatgcaaaggcag 2050
|||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 28436825 tctctgcggatgatggtgttcgtccacaaacaaatgaggcaattgcacatgcaaaggcag 28436884
Query: 2051 ccagagtccctattgtaatagctataaataaggt 2084
| ||||||||||||| ||||| ||||| |||||
Sbjct: 28436885 ctggagtccctattgtgatagccataaacaaggt 28436918
Score = 137 bits (69), Expect = 2e-28
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 1817 aggtggtggcatctgaagctggtggaataacgcaaggaattggagcatatcaggttcttg 1876
|||||||||||||||| ||||| |||||||| ||||| ||||| || ||||||||| |||
Sbjct: 28436555 aggtggtggcatctgaggctggcggaataacacaagggattggtgcctatcaggttattg 28436614
Query: 1877 tgccagttgatggaaaccctcaggcttgtgtttttcttgatactccagggcatgagg 1933
| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 28436615 tacaggttgatggaaaccctcatgcttgtgtttttcttgatactccagggcacgagg 28436671
Score = 105 bits (53), Expect = 7e-19
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 2084 tagacaaggagggtgctaatccagaacgagtcatgcaagaactttcccagattggactta 2143
|||||||||| || |||||| | ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 28437005 tagacaaggaaggagctaatgctgaacgggtcatgcaagagctttcccaaattggactta 28437064
Query: 2144 tgccagagatgtggggtggtgacaccccgatggttcaggttgtttattggcacactctgg 2203
|||||||| |||||||||||| | ||| ||| ||||||||||| ||| |||| |||||
Sbjct: 28437065 tgccagaggcgtggggtggtgatatcccaatgattcaggttgttgattctcacaatctgg 28437124
Query: 2204 a 2204
|
Sbjct: 28437125 a 28437125
Score = 79.8 bits (40), Expect = 4e-11
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2229 acttattacctattttgagctgatttagttgtgatatctgtcagataagtgctcttaagg 2288
|||| |||||||||| || ||||||||||||| || |||||||||||||||||||||| |
Sbjct: 28437178 acttgttacctattt-gatctgatttagttgttatgtctgtcagataagtgctcttaatg 28437236
Query: 2289 gagagaatgttgatgagctattagagac 2316
||||| ||| ||||| ||||| |||||
Sbjct: 28437237 gagagggtgtagatgaactattggagac 28437264
Score = 77.8 bits (39), Expect = 2e-10
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1774 ttctgtttgcagactactcttttggattatatacgcaagagcaaggt 1820
||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 28436000 ttctgtttgcagactaccctgttggattatatacgcaagagcaaggt 28436046
Score = 63.9 bits (32), Expect = 2e-06
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 602 tgatgacagcgatcttctttcgaagcccccgcagaggccagtccggctgaatgggccacc 661
|||||| ||||||||||||| |||||| ||||||| |||| ||||| ||||||||||||
Sbjct: 28434833 tgatgatagcgatcttcttttgaagccaccgcagaagccaatccgggcgaatgggccacc 28434892
Score = 58.0 bits (29), Expect = 2e-04
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 742 gggagtcattggatgaggtgttgcagaaggcagagaa 778
||||||||||||||||||||||| ||||||| |||||
Sbjct: 28434958 gggagtcattggatgaggtgttggagaaggctgagaa 28434994
Score = 52.0 bits (26), Expect = 0.009
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 375 cctgcttctgttaccaacctggggagcaacggaaggcc 412
|||||||||||| |||||||||||| |||||| |||||
Sbjct: 28434621 cctgcttctgttgccaacctggggaccaacgggaggcc 28434658
>dbj|AK068873.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013170P17, full
insert sequence
Length = 2059
Score = 404 bits (204), Expect = e-109
Identities = 392/455 (86%), Gaps = 6/455 (1%)
Strand = Plus / Plus
Query: 1260 acaccagctggtccccgccgacgtatgccaaatgatggtcgatcagttgatgacgatgct 1319
|||||||||||||| |||||||| |||||||| ||| | | | ||||||||| ||| ||
Sbjct: 1071 acaccagctggtcctcgccgacgaatgccaaaaaatgatggtttagttgatgaggatact 1130
Query: 1320 ccagtgcgcaaaggaaggagatggagcaaggcaaaacgtagggctgccag------gcta 1373
|||||||||| || ||||||||||||||||||||||| || ||||| || |||
Sbjct: 1131 gcagtgcgcaaggggaggagatggagcaaggcaaaacgcagagctgcaagacttcagctt 1190
Query: 1374 gaggctttagaagctgaagagcctgttagggttgagatccttgaagttggtgaagaaggt 1433
||||||| | ||| ||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 1191 gaggcttcacaagttgaagagccagttagagtcgagatccttgaagttggtgaagaagga 1250
Query: 1434 atggatattgacgaattagcatatcaactggcagttggcgaatcagaaattctgcgtttt 1493
|||| ||||| ||||| ||||||||| ||||| ||| |||||||||||||||||| |||
Sbjct: 1251 atggtaattgaggaattggcatatcaattggcaattgacgaatcagaaattctgcgattt 1310
Query: 1494 ttatcagtgagaggagcaatgcttgacaatgttcagactcttgataaagatttggttaag 1553
||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 1311 ttatctgtgagaggagctatgcttgacaatgttcagacacttgataaagatctggttaag 1370
Query: 1554 atggtttgcatggaatatgaagttgaagtactggaaagtggtccagtgagagtggaagaa 1613
|||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 1371 atggtttgtatggaatatgatgtagaagtactggaaagtggtccagtgaaagtggaagag 1430
Query: 1614 atggcaaagaagaatgagttccttgatgatgaggatttggataaactggaaataaggcct 1673
|||||||||||||| || || ||||| || || |||||||| || ||||| || ||
Sbjct: 1431 atggcaaagaagaaggaatttcttgacgaggaagatttggacaagttggaagacagaccc 1490
Query: 1674 cccattgtaactatcatgggtcatgtcgatcatgg 1708
|| ||||||||||||||||| ||||||||||||||
Sbjct: 1491 cctattgtaactatcatgggccatgtcgatcatgg 1525
Score = 216 bits (109), Expect = 3e-52
Identities = 279/335 (83%), Gaps = 3/335 (0%)
Strand = Plus / Plus
Query: 899 gacaaaaacactaaagggtgtatggagaaaggggaaccctgtgcccactgtacataaggt 958
|||||||||||| ||| | |||||| ||||||| ||||||||| | ||||||||||||||
Sbjct: 707 gacaaaaacacttaagagcgtatggcgaaagggaaaccctgtgtcaactgtacataaggt 766
Query: 959 gattagagatcgtccacacactgaaactggggatcagtccatatctgctgctgaaccttc 1018
| | ||||||| ||||| | |||||| | || ||||||| | ||| | || |||||||
Sbjct: 767 ggtcagagatcatccacgctctgaaagtaggaatcagtctagttctacagcaaaaccttc 826
Query: 1019 agtgtcatctccatcaaaactagcacctcacctacaaacaagaccttc---tgtagcacc 1075
|| || ||||| |||||| || ||||| |||| ||||| |||||| ||||||||
Sbjct: 827 tatgccagctccaacaaaaccagtacctcctctactaacaaaaccttcagtagtagcacc 886
Query: 1076 accacctcgtcggcctgtcaaagctgacacatcaaaggagaaaaaaggacccatcctgat 1135
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 887 accacctcgtcggcctgtcaaggctgatacatcaaaggagaaaaagggacccatcctgat 946
Query: 1136 cgacaaatttgcttccaagagaccaatggttgatccagctgtagctgaggcactggtaga 1195
|| |||||||||||||| | |||||| || ||||||| |||||||| |||||| ||||
Sbjct: 947 tgataaatttgcttccaataaaccaatagtggatccagttgtagctgcagcactgataga 1006
Query: 1196 ccctgtcaagctagtacgcggttcaccagcaaaag 1230
||||| |||| |||||| || ||||||||||||
Sbjct: 1007 acctgtaaagccagtacgaggcccaccagcaaaag 1041
Score = 188 bits (95), Expect = 6e-44
Identities = 137/151 (90%)
Strand = Plus / Plus
Query: 1784 agactactcttttggattatatacgcaagagcaaggtggtggcatctgaagctggtggaa 1843
||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1528 agactaccctgttggattatatacgcaagagcaaggtggtggcatctgaggctggcggaa 1587
Query: 1844 taacgcaaggaattggagcatatcaggttcttgtgccagttgatggaaaccctcaggctt 1903
|||| ||||| ||||| || ||||||||| |||| | ||||||||||||||||| ||||
Sbjct: 1588 taacacaagggattggtgcctatcaggttattgtacaggttgatggaaaccctcatgctt 1647
Query: 1904 gtgtttttcttgatactccagggcatgaggc 1934
||||||||||||||||||||||||| |||||
Sbjct: 1648 gtgtttttcttgatactccagggcacgaggc 1678
Score = 63.9 bits (32), Expect = 2e-06
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 602 tgatgacagcgatcttctttcgaagcccccgcagaggccagtccggctgaatgggccacc 661
|||||| ||||||||||||| |||||| ||||||| |||| ||||| ||||||||||||
Sbjct: 431 tgatgatagcgatcttcttttgaagccaccgcagaagccaatccgggcgaatgggccacc 490
Score = 58.0 bits (29), Expect = 2e-04
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 742 gggagtcattggatgaggtgttgcagaaggcagagaa 778
||||||||||||||||||||||| ||||||| |||||
Sbjct: 556 gggagtcattggatgaggtgttggagaaggctgagaa 592
Score = 52.0 bits (26), Expect = 0.009
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 375 cctgcttctgttaccaacctggggagcaacggaaggcc 412
|||||||||||| |||||||||||| |||||| |||||
Sbjct: 219 cctgcttctgttgccaacctggggaccaacgggaggcc 256
>emb|AL360001.33 | Human DNA sequence from clone RP11-332O19 on chromosome 10 Contains the
5' end of the NT5C2 gene for cytosolic 5'-nucleotidase
II, a ribosomal protrein S15A (RPS15A) pseudogene, a
MARCKS-like protein (MLP) pseudogene, a suppression of
tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
protein) (ST13) pseudogene, a
ribulose-5-phosphate-3-epimerase (RPE) pseudogene and two
CpG islands, complete sequence
Length = 142893
Score = 42.1 bits (21), Expect = 9.1
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1640 tgatgaggatttggataaactggaa 1664
||||||||||||||| |||||||||
Sbjct: 53850 tgatgaggatttggagaaactggaa 53874
>gb|AC005847.1 |AC005847 Drosophila melanogaster DNA sequence (P1s DS03179 (D226), DS06357 (D230),
DS03404 (D231), DS06962 (D232), and DS07291 (D240)),
complete sequence
Length = 268369
Score = 42.1 bits (21), Expect = 9.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1219 caccagcaaaagcgaaggata 1239
|||||||||||||||||||||
Sbjct: 257980 caccagcaaaagcgaaggata 257960
>gb|AC000125.1 |HSAC000125 Human Cosmid g1572c037 from 7q31.3, complete sequence
Length = 43104
Score = 42.1 bits (21), Expect = 9.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 360 attgtcatggcgtctcctgcttctgttac 388
|||| |||||| |||||||||||||||||
Sbjct: 12179 attggcatggcctctcctgcttctgttac 12151
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 405,607,485
Number of extensions: 21488962
Number of successful extensions: 111056
Number of sequences better than 10.0: 74
Number of HSP's gapped: 111045
Number of HSP's successfully gapped: 113
Length of query: 2383
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2360
Effective length of database: 18,503,978,556
Effective search space: 43669389392160
Effective search space used: 43669389392160
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)