ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf117i11 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g33830:12004.t03059:unspliced-genomic 16kDa membrane protein, putative, expressed| Length = 1077 Score = 138 bits (296), Expect(3) = 4e-63 Identities = 52/60 (86%), Positives = 57/60 (95%) Frame = +2 / +2 Query: 203 FPRDWLRRDLNVIGFGLIGWLAPSSIPLINGNSLTGLFFSSIGEELAHFPSPPALQSQFW 382 FP+DWLRRDLNVIGFGLIGW+APSS+P INGNSLTGLFFSSIG+EL+HFPSPPAL S FW Sbjct: 497 FPQDWLRRDLNVIGFGLIGWIAPSSVPAINGNSLTGLFFSSIGQELSHFPSPPALDSPFW 676 Score = 75.8 bits (159), Expect(3) = 4e-63 Identities = 29/32 (90%), Positives = 30/32 (93%) Frame = +2 / +1 Query: 383 LWLVTWHLGLFIALTFGQIGFKGRTEDYFQK* 478 LWLVTWHLGLF+ALTFGQIGFKGRTE YF K* Sbjct: 793 LWLVTWHLGLFLALTFGQIGFKGRTEGYFDK* 888 Score = 66.6 bits (139), Expect(3) = 4e-63 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = +2 / +2 Query: 107 FSTSFTSGGRVSARNPLMTRNLERNGRITCMT 202 F FT+G RVSARNPL+TRNLERNGRITCMT Sbjct: 293 FCAGFTTGARVSARNPLLTRNLERNGRITCMT 388 Score = 112 bits (240), Expect(3) = 2e-51 Identities = 48/61 (78%), Positives = 52/61 (85%) Frame = -1 / -1 Query: 381 QNCDWRAGGEGKWASSSPMLEKKSPVKLLPLISGMLDGASHPISPNPITFRSLRSQSRGN 202 QN + AGGEGKW SS PMLEKKSPV+LLPLI+G LDGA HPISPNPITFRSL SQS GN Sbjct: 675 QNGESSAGGEGKWESSWPMLEKKSPVRLLPLIAGTLDGAIHPISPNPITFRSLLSQSCGN 496 Query: 201 V 199 + Sbjct: 495 L 493 Score = 68.9 bits (144), Expect(3) = 2e-51 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -3 / -1 Query: 475 LLEVVLGPALEPDLAEGERDEQTQVPRHQPQP 380 L+EV LGPALEPDLAEGER EQ +VPRHQPQP Sbjct: 885 LVEVALGPALEPDLAEGERQEQPKVPRHQPQP 790 Score = 59.7 bits (124), Expect(3) = 2e-51 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = -1 / -1 Query: 201 VMQVILPFLSRFLVISGFLADTRPPLVKLVEK 106 VMQVILPFLSRFLV SGFLADTR P+VK +K Sbjct: 387 VMQVILPFLSRFLVSSGFLADTRAPVVKPAQK 292 Score = 67.0 bits (140), Expect(2) = 5e-20 Identities = 26/29 (89%), Positives = 26/29 (89%) Frame = -1 / -2 Query: 468 K*SSVLPLNPIWPKVSAMNRPRCHVTNHS 382 K* SVLPLNPIWPKVSA N PRCHVTNHS Sbjct: 878 K*PSVLPLNPIWPKVSARNSPRCHVTNHS 792 Score = 50.6 bits (104), Expect(2) = 5e-20 Identities = 21/25 (84%), Positives = 22/25 (88%) Frame = -3 / -3 Query: 382 PELRLESRGRGEVGELLADAGEEEP 308 PE R+E R RGEVGELLADAGEEEP Sbjct: 676 PERRVERRRRGEVGELLADAGEEEP 602 Score = 73.9 bits (155), Expect(2) = 8e-17 Identities = 36/60 (60%), Positives = 38/60 (63%) Frame = +1 / +1 Query: 202 VPTGLAAEGPEXXXXXXXXXXGAVEHPADQRQQLDGALLLQHRRGARPLPLAPGSPVAVL 381 V GLA EGPE AVE P DQRQQ GALLLQHR GA PLPLA G+ +AVL Sbjct: 496 VSAGLA*EGPERDRVRADRVDRAVERPGDQRQQPHGALLLQHRPGALPLPLAAGARLAVL 675 Score = 32.7 bits (65), Expect(2) = 8e-17 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 / +1 Query: 109 LYQLHEWRPGVXXXXXXXXXXXXXRQNHLHDV 204 L +LH+ RPGV RQ+HLHDV Sbjct: 295 LCRLHDGRPGVGEEPAADEEPGEERQDHLHDV 390 Score = 62.9 bits (131), Expect = 2e-09 Identities = 31/52 (59%), Positives = 36/52 (69%) Frame = +1 / +3 Query: 322 QHRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRPDRVQGQDRGLLPEV 477 Q R A L + G + + AVVGDVAP +V AHLRPDRVQGQDRGLL +V Sbjct: 732 QKRSVATCLIVHVGFVINLQAVVGDVAPWAVPGAHLRPDRVQGQDRGLLRQV 887
>LOC_Os05g32370:12005.t02833:unspliced-genomic pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16,| putative, expressed Length = 3583 Score = 39.1 bits (79), Expect = 0.033 Identities = 19/41 (46%), Positives = 20/41 (48%) Frame = +1 / -2 Query: 295 QQLDGALLLQHRRGARPLPLAPGSPVAVLAVVGDVAPGSVH 417 +QLDGALLL HRR LPL P V A VH Sbjct: 567 EQLDGALLLGHRRSLLHLPLVLADPGVVAAAAATAGHPPVH 445
>LOC_Os12g04840:12012.t00371:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5287 Score = 37.7 bits (76), Expect = 0.085 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = -1 / +1 Query: 450 PLNPIWPKVSAMNRPRCHVTNHSQNCDWRAGGEGKWASSSPMLEKKSPVKLLPLISGMLD 271 P++ P+ +A RP + QN R GG+G SSSP + P P + + Sbjct: 1651 PVSTTGPRTTAKTRPSSYDLEEIQN*PCRQGGDGCRRSSSPPQGVRRPTSKQPSTARSQE 1830 Query: 270 GASHPI 253 G P+ Sbjct: 1831 GLKRPL 1848 Score = 36.3 bits (73), Expect = 0.22 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = +2 / -3 Query: 257 GWLAPSSIPLINGNSLTGLFFSSIGEELAHFPSPPALQSQFWLWLVTWHLGLFIALTFGQ 436 G PS ++G L G G EL PSPP L QF + + LGL +A+ G Sbjct: 1844 GLFRPSCERAVDGCLLVGRRTPCGGLELLRQPSPPCLHGQF*ISSKS*ELGLVLAVVLGP 1665 Query: 437 I 439 + Sbjct: 1664 V 1662
>LOC_Os02g13100:12002.t01107:unspliced-genomic catalytic/ protein phosphatase type 2C, putative, expressed| Length = 3249 Score = 35.4 bits (71), Expect = 0.42 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 / +2 Query: 369 WRAGGEGKWASSSPMLEKKSPVKLL 295 WR GG G+W SSP +K+P + L Sbjct: 326 WRVGGLGRWPPSSPRGARKAPTRTL 400 Score = 33.1 bits (66), Expect = 2.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 / -1 Query: 302 LTGLFFSSIGEELAHFPSPPAL 367 L G F + +GEE H PSPP L Sbjct: 393 LVGAFLAPLGEEGGHLPSPPTL 328
>LOC_Os01g65260:12001.t05892:unspliced-genomic amidophosphoribosyltransferase, chloroplast precursor, putative,| expressed Length = 1948 Score = 35.4 bits (71), Expect = 0.42 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = +1 / +3 Query: 337 ARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRPDRVQGQDRG 462 ARP P+A P AV GD P +A R R QGQ+RG Sbjct: 1173 ARPHPVALQRPQLHPAVAGDPRPRRQAQARARARRHQGQERG 1298
>LOC_Os04g58560:12004.t05319:unspliced-genomic cysteine protease ATG4B, putative, expressed| Length = 3443 Score = 35.0 bits (70), Expect = 0.57 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 500 HACASSLLVLGYFCACVFNVKSVMPSGFVHACGF 601 +AC+ L+ GYFC+ F ++S++ S V GF Sbjct: 2415 YACSQRPLLSGYFCSIPFCLESILVSNLVEVDGF 2516
>LOC_Os05g08370:12005.t00717:unspliced-genomic CESA1 - cellulose synthase, expressed| Length = 6285 Score = 34.5 bits (69), Expect = 0.78 Identities = 13/49 (26%), Positives = 23/49 (46%) Frame = +2 / +1 Query: 302 LTGLFFSSIGEELAHFPSPPALQSQFWLWLVTWHLGLFIALTFGQIGFK 448 +T L ++ ++ FP PP L S +W W +H+ L G + + Sbjct: 5386 VTLLSYTCSSGPVSSFPRPPCLSSTWWAWWRVYHMPLTAVTNHGVLSLE 5532
>LOC_Os11g44860:12011.t04014:unspliced-genomic protein kinase domain containing protein, expressed| Length = 3889 Score = 34.5 bits (69), Expect = 0.79 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 / +2 Query: 328 RRGARPLPLAPGSPVAVLAVVGDVA 402 RRGA LPLAPG +A GD A Sbjct: 3305 RRGAAALPLAPGEAARAVAAAGDAA 3379
>LOC_Os08g33810:12008.t03122:unspliced-genomic lipoate protein ligase-like protein, putative, expressed| Length = 4754 Score = 34.5 bits (69), Expect = 0.79 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / -3 Query: 313 LLLQHRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAH 426 L++ R RP PLAP +P A+L GS+ AH Sbjct: 354 LMVTSRMSGRPAPLAPATPAAILVSEWAAHAGSLSVAH 241
>LOC_Os09g32250:12009.t02841:unspliced-genomic expressed protein| Length = 5410 Score = 34.1 bits (68), Expect = 1.1 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +1 / +3 Query: 523 CAGLLLRMCVQCKICHAFWFRACVWLRKPC 612 C L + + + C + RACVWL PC Sbjct: 5220 CMCLFILLVMSSSFCSCVFLRACVWLCNPC 5309
>LOC_Os12g23040:12012.t02039:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 7809 Score = 33.6 bits (67), Expect = 1.5 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -1 Query: 516 PYLCWATSAHVCSM*NLSCLLVSCMRVAS 602 P C + HVCS+ +CLL+SC V S Sbjct: 5880 PETCHSLQVHVCSVRLTACLLISCSGVIS 5794
>LOC_Os04g49410:12004.t04456:unspliced-genomic alpha-expansin 13 precursor, putative, expressed| Length = 4417 Score = 26.7 bits (52), Expect(2) = 1.5 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +1 / -1 Query: 601 RKPCDCCLLIAPLPC*AQN 657 +K C+C LL+ P P *++N Sbjct: 3193 KKICNCKLLLVPFPL*SRN 3137 Score = 24.0 bits (46), Expect(2) = 1.5 Identities = 6/17 (35%), Positives = 12/17 (70%) Frame = +3 / -2 Query: 486 TSFWIMHVRRPYLCWAT 536 + +++ H+ P+LCW T Sbjct: 3339 SKWYMPHL*APFLCWTT 3289
>LOC_Os04g49420:12004.t04457:unspliced-genomic histone H4, putative, expressed| Length = 1582 Score = 26.7 bits (52), Expect(2) = 1.6 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +1 / +1 Query: 601 RKPCDCCLLIAPLPC*AQN 657 +K C+C LL+ P P *++N Sbjct: 1225 KKICNCKLLLVPFPL*SRN 1281 Score = 24.0 bits (46), Expect(2) = 1.6 Identities = 6/17 (35%), Positives = 12/17 (70%) Frame = +3 / +2 Query: 486 TSFWIMHVRRPYLCWAT 536 + +++ H+ P+LCW T Sbjct: 1079 SKWYMPHL*APFLCWTT 1129
>LOC_Os11g32240:12011.t02821:unspliced-genomic cytochrome P450 51, putative, expressed| Length = 4570 Score = 33.1 bits (66), Expect = 2.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -3 / +2 Query: 445 EPDLAEGERDEQTQVPRHQPQPELRLESRGRGEVGELLADAGEEEP 308 +PD G R + ++ R PQP+ L R RG L + G +EP Sbjct: 1019 DPDDPGGVRPPRQRLHRPHPQPQDHLPHRPRGVGALLQGERGRDEP 1156
>LOC_Os09g30190:12009.t02697:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 3819 Score = 33.1 bits (66), Expect = 2.0 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -3 / +2 Query: 496 QKLVNPLLLEVVLGPALEPDLAEGERDEQTQVPRHQPQPELRLESRG 356 ++L PL P L D R E+ Q+PRHQ QP R + G Sbjct: 1460 RRLRQPLPSPAQRQPPLRHDPGGDRRPEEPQLPRHQRQPPRRRRAIG 1600
>LOC_Os07g28614:12007.t04694:unspliced-genomic expressed protein| Length = 774 Score = 33.1 bits (66), Expect = 2.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 / +3 Query: 325 HRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRP 435 H RPLP P P+ + A V ++P ++HR P Sbjct: 237 HLPAPRPLPRPPEPPLRLAAAVPALSPATLHRRRRHP 347
>LOC_Os05g46920:12005.t04175:unspliced-genomic expressed protein| Length = 3223 Score = 33.1 bits (66), Expect = 2.0 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 / +1 Query: 337 ARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRPDRVQGQDR 459 A + +AP P V AVV ++P HLRP R QG+ R Sbjct: 469 ATAVAVAPRVPGIVAAVVASLSP*RGGALHLRPRREQGRGR 591
>LOC_Os03g26500:12003.t02335:unspliced-genomic expressed protein| Length = 915 Score = 33.1 bits (66), Expect = 2.0 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +1 / -3 Query: 274 EHPADQRQQLDGALLLQHRRGARPLPLAP 360 EHP D+ LLL HR+ RP PL P Sbjct: 646 EHPRDEAAGAPDPLLLYHRK*PRPHPLRP 560
>LOC_Os01g52750:12001.t04701:unspliced-genomic subtilisin-like protease precursor, putative, expressed| Length = 4937 Score = 31.8 bits (63), Expect(2) = 2.4 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / +1 Query: 322 QHRRGARPLPLAPGSPVAVL 381 Q RR ARPLP PG P A + Sbjct: 4327 QRRRAARPLPPLPGDPAAAV 4386 Score = 23.1 bits (44), Expect(2) = 2.4 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 418 RAHLRPDRVQGQDRG 462 RAH R + VQ +DRG Sbjct: 4546 RAHRREEVVQDKDRG 4590
>LOC_Os09g13610:12009.t01150:unspliced-genomic PFT1, putative, expressed| Length = 11323 Score = 27.6 bits (54), Expect(2) = 2.5 Identities = 9/32 (28%), Positives = 11/32 (34%) Frame = +1 / -2 Query: 502 CMCVVLTCAGLLLRMCVQCKICHAFWFRACVW 597 C+C + C C C WF C W Sbjct: 10536 CVCSCMCCCSCCCCNCCCSWCCCCSWFCGCSW 10441 Score = 22.1 bits (42), Expect(2) = 2.5 Identities = 7/17 (41%), Positives = 8/17 (47%) Frame = +1 / -2 Query: 580 FRACVWLRKPCDCCLLI 630 F C W C+CC I Sbjct: 10422 FCCCSWFCCCCNCCCCI 10372
>LOC_Os09g12630:12009.t01052:unspliced-genomic expressed protein| Length = 855 Score = 32.7 bits (65), Expect = 2.8 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -3 / -3 Query: 460 LGPALEPDLAEGERDEQTQVPRHQPQPELRLESRGRGEVGELLADAGEE 314 LGP L+ DL + RH + + +ESR EL A G E Sbjct: 358 LGPRLDEDLGDARAAAGNAAARHHAELRVDVESRAERAADELHAGRGRE 212
>LOC_Os08g01830:12008.t00082:unspliced-genomic receptor protein kinase CRINKLY4 precursor, putative, expressed| Length = 3080 Score = 32.7 bits (65), Expect = 2.8 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 / +3 Query: 328 RRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLR 432 RR ARP P P+ + VVG APG R R Sbjct: 1770 RRAARPPPRPRRRPLPAVRVVGGAAPGGARRGARR 1874
>LOC_Os04g47350:12004.t04261:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2020 Score = 32.7 bits (65), Expect = 2.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 / +3 Query: 435 WPKVSAMNRPRCHVTNHSQNCDWRAGG 355 WP++ RPR HV H + R+GG Sbjct: 603 WPRLEGKGRPRRHVAPHERGSGPRSGG 683
>LOC_Os03g46980:12003.t04061:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3295 Score = 32.7 bits (65), Expect = 2.8 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +1 / +2 Query: 325 HRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRPDRVQGQ 453 HRR A L P V L + G+V PG + A R DR Q Sbjct: 2762 HRRFAGRARLVPAGEVEALRLAGEVGPGMLRDAVSRLDRAGRQ 2890
>LOC_Os06g30710:12006.t02774:unspliced-genomic DGCR14 protein, putative, expressed| Length = 4115 Score = 25.8 bits (50), Expect(2) = 3.6 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = +1 / +1 Query: 403 PGSVHRAHLRPDRVQGQDRGLLP 471 PG R HLR R GLLP Sbjct: 310 PGGARRGHLRRGRRADHRAGLLP 378 Score = 23.5 bits (45), Expect(2) = 3.6 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +1 / +1 Query: 322 QHRRGARPLPLAPGSPVAVLAVVGDV 399 +HRR R PLA P L V G V Sbjct: 127 RHRRRRRDAPLAGPLPAPPLPVPGAV 204
>LOC_Os04g51930:12004.t04669:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5683 Score = 29.0 bits (57), Expect(2) = 3.6 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = +2 / -2 Query: 269 PSSIPLINGNSLTGLFFSSIGEELAHFPSPPALQSQFWLWLVT 397 PS++ +NG+ L L + +G A P + W+W +T Sbjct: 2928 PSALLKLNGDELRSLVVADVGCATA*TPQGSHCADEAWIWGLT 2800 Score = 25.4 bits (49), Expect(2) = 3.6 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +2 / -1 Query: 206 PRDWLRRDLNVIGFGLIGWLAPSSIPL 286 P DWL+ VIG W SS+ L Sbjct: 5299 PLDWLQEHNGVIGINGCVWDGTSSVQL 5219
>LOC_Os12g03899:12012.t00280:unspliced-genomic carbohydrate transporter/ sugar porter/ transporter, putative,| expressed Length = 14773 Score = 32.2 bits (64), Expect = 3.9 Identities = 15/43 (34%), Positives = 17/43 (39%) Frame = -1 / -2 Query: 408 PRCHVTNHSQNCDWRAGGEGKWASSSPMLEKKSPVKLLPLISG 280 P CH C GGE L ++SPV LL I G Sbjct: 7806 PECHRLQKGGECSIHTGGEADHPEIEEFLVRQSPVDLLLAIVG 7678
>LOC_Os09g08170:12009.t00613:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2155 Score = 32.2 bits (64), Expect = 3.9 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 331 RGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRPDRVQGQDRG 462 R RPLPLA G+P ++A G V R + V G DRG Sbjct: 1753 REGRPLPLALGTPSGLVAQKGG*EQPPVSRGIQQHSVVLGTDRG 1884
>LOC_Os05g48750:12005.t04309:unspliced-genomic 3-deoxy-manno-octulosonate cytidylyltransferase, putative,| expressed Length = 3218 Score = 32.2 bits (64), Expect = 3.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 / +1 Query: 369 WRAGGEGKWASSSPMLEKKSPVKLLPLISGMLDGA 265 WR+ + +W S++P E+ LP + G+L GA Sbjct: 10 WRSQSQSQWGSAAPPCEEAGGDADLPAVVGILAGA 114
>LOC_Os02g20090:12002.t01801:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2174 Score = 32.2 bits (64), Expect = 3.9 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -1 / -2 Query: 456 VLPLNPIWPKVSAMNRPRCHVTNHS 382 +LPL +WPKV +++RP V + S Sbjct: 1162 LLPLGQVWPKVLSLSRPAAKVLSSS 1088
>LOC_Os08g41030:12008.t03833:unspliced-genomic ethylene-responsive transcription factor 3, putative, expressed| Length = 906 Score = 31.8 bits (63), Expect = 5.3 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -3 / -3 Query: 457 GPALEPDLAEGERDEQTQVPRHQPQPELRLESRGRGEVGELLADA 323 G A+ P A+ R Q H PQP++ R R GE++ DA Sbjct: 172 GRAVAPRHADLRRPPAPQPAPHPPQPQVLRRVRRRRHHGEVIGDA 38
>LOC_Os01g22070:12001.t01942:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 3186 Score = 31.8 bits (63), Expect = 5.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 / -1 Query: 516 PYLCWATSAHVCSM*NLSCLLVSCMRVAS 602 P C + HVCS+ +CL++SC V S Sbjct: 2454 PETCHSLKVHVCSVRLTACLIMSCSGVIS 2368
>LOC_Os03g19330:12003.t01699:unspliced-genomic glycosyltransferase 3, putative, expressed| Length = 1581 Score = 26.7 bits (52), Expect(2) = 5.3 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 / +3 Query: 394 DVAPGSVHRAHLRPDRVQGQDRG 462 +V VHR LRP RV G RG Sbjct: 969 EVGGQGVHRELLRPQRVLGGHRG 1037 Score = 25.4 bits (49), Expect(2) = 5.3 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 / +2 Query: 140 SARNPLMTRNLERNGRITCMTFPRDWLR 223 SA P + + +GR TC T R W R Sbjct: 770 SASTPAASSSATASGRSTCSTRGRPWGR 853
>LOC_Os06g40190:12006.t03715:unspliced-genomic phospholipase D alpha 2, putative, expressed| Length = 3671 Score = 31.8 bits (63), Expect = 5.3 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 304 DGALLLQHRRGARPLPLAP 360 DG LL +HRR RPLP P Sbjct: 1179 DGGLLPRHRRALRPLPAEP 1235
>LOC_Os01g57270:12001.t05133:unspliced-genomic disease resistance RPP13-like protein 1, putative, expressed| Length = 4743 Score = 31.8 bits (63), Expect = 5.3 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = +1 / +2 Query: 505 MCVVLTCAGLLLRMCVQCKICHAFWFRACVWLRKPCDCCLLIAPLP 642 + + L+C + + + +C +F F V+L+ DC LL+ LP Sbjct: 62 LSIPLSCKAVPCELSI*T*VCSSFIFATLVFLK*SVDCSLLVYHLP 199
>LOC_Os10g17810:12010.t01337:unspliced-genomic hypothetical protein| Length = 2911 Score = 29.9 bits (59), Expect(2) = 6.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -1 / -1 Query: 345 WASSSPMLEKKSPVKLLPLISGMLDGASHPISPNPITFRSLRS 217 WA P + LP +SG G +H P+P + RS R+ Sbjct: 625 WAGRRPRPSPAAQAAPLPPLSGSPTGGAHLSDPSPSSRRSRRA 497 Score = 22.6 bits (43), Expect(2) = 6.7 Identities = 9/21 (42%), Positives = 10/21 (47%) Frame = -3 / -1 Query: 565 RFYIEHTCAEVAQHK*GRRTC 503 RFY TC + K GR C Sbjct: 2644 RFYNYKTCVSASLEKTGRLRC 2582
>LOC_Os08g36320:12008.t03372:unspliced-genomic glutamate decarboxylase, putative, expressed| Length = 4276 Score = 31.3 bits (62), Expect = 7.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 / +3 Query: 185 RITCMTFPRDWLRRDLNVIGFGLIG 259 R C T PR WL ++ +GFG G Sbjct: 501 RYACETLPRCWLHAPISRLGFGQFG 575
>LOC_Os08g12680:12008.t01147:unspliced-genomic zinc finger domain, LSD1 subclass family protein, expressed| Length = 21865 Score = 31.3 bits (62), Expect = 7.2 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 / -1 Query: 661 LGFVLSMEEGQLTNSNHTACEATRMHETRRHDRFYIEH 548 L FVLS GQ +S + C+AT R+H+ + H Sbjct: 4201 LSFVLS*SRGQFIDSTNNGCKATLTLPYRQHNASHALH 4088
>LOC_Os06g47250:12006.t04411:unspliced-genomic expressed protein| Length = 4681 Score = 31.3 bits (62), Expect = 7.2 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +2 / +3 Query: 377 FWLWLVTWHLGLF 415 +WL +TWHLGLF Sbjct: 3009 YWLMFLTWHLGLF 3047
>LOC_Os02g40610:12002.t03697:unspliced-genomic hypothetical protein| Length = 2416 Score = 31.3 bits (62), Expect = 7.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 / -1 Query: 454 PALEPDLAEGERDEQTQVPRHQPQPELRLES 362 P L P ++ R Q V RH P P +RLE+ Sbjct: 2347 PQLMPVVSALRRHSQRDVERHSPAPRVRLEA 2255
>LOC_Os06g41700:12006.t03862:unspliced-genomic alpha-expansin 20 precursor, putative, expressed| Length = 4472 Score = 31.3 bits (62), Expect = 7.3 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -1 / -3 Query: 231 RSLRSQSRGNVMQVILPFLSRFLVI 157 R ++Q RG V++ +LPF SRF+ I Sbjct: 78 RGAQAQHRGRVVEGVLPFCSRFIGI 4
>LOC_Os01g08320:12001.t00710:unspliced-genomic OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed| Length = 2763 Score = 31.3 bits (62), Expect = 7.3 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +1 / -1 Query: 313 LLLQHRRGARPLPLAPGSPVAVLAVVGDVAPGSVHRAHLRP 435 L RRG+ P +A PVAVL +V VHR H P Sbjct: 843 LARNQRRGSLPGDVADEHPVAVLVLVRRHVLRPVHRVHQLP 721
>LOC_Os01g63630:12001.t05731:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7758 Score = 24.9 bits (48), Expect(2) = 8.2 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 / -2 Query: 347 FPSPPALQSQFWLWLVTWHLGLFIALTFGQ 436 FPSPPA S F L+L + L+ Q Sbjct: 1961 FPSPPAALSPF*LYLNPPRTSSVVVLSLAQ 1872 Score = 23.1 bits (44), Expect(2) = 8.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 / -3 Query: 301 LDGALLLQHRRGARPLPLAPGSP 369 LDGA+ R A LPL P SP Sbjct: 2002 LDGAIDGARERRAGFLPLRPPSP 1934
>LOC_Os05g50910:12005.t04521:unspliced-genomic expressed protein| Length = 6679 Score = 30.9 bits (61), Expect = 9.9 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +2 / -3 Query: 524 VLGYFCACVFNVKSVMPSGFVHA 592 VL Y+C C ++ V GF HA Sbjct: 5675 VLVYYCCCTLKLQEVQSKGFFHA 5607
>LOC_Os05g02400:12005.t00139:unspliced-genomic RNA binding protein, putative, expressed| Length = 2853 Score = 30.9 bits (61), Expect = 9.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 / +1 Query: 430 EGERDEQTQVPRHQPQPELRLESRGRGEVGELLADAGEEE 311 E R+E+ +V + + + +E+ GEVGE A+ EEE Sbjct: 217 ELRREERRKVKKEKRRIRRLMETEAAGEVGEAAAEEEEEE 336
>LOC_Os04g04330:12004.t00320:unspliced-genomic ATP binding protein, putative, expressed| Length = 4354 Score = 30.9 bits (61), Expect = 9.9 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -3 / +3 Query: 454 PALEPDLAEGERDEQTQVPRHQPQPELRLESR 359 PA D G RDE+ Q+PR + QP R R Sbjct: 1752 PARRDDPGGGGRDEEHQLPRPRQQPPRRRRPR 1847
>LOC_Os11g45850:12011.t04111:unspliced-genomic OsWRKY61 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 1234 Score = 30.9 bits (61), Expect = 10.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -1 / -2 Query: 411 RPRCHVTNHSQNCDWRAGGEGKWASSSP 328 R RC S +C+ R GG W+S SP Sbjct: 618 RRRCSSGRTSSSCNRRLGGRRPWSSPSP 535
>LOC_Os11g24230:12011.t02044:unspliced-genomic hypothetical protein| Length = 2938 Score = 30.9 bits (61), Expect = 10.0 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +1 / -2 Query: 535 LLRMCVQCKICHAFWFRACVWLRKPCDCC 621 L++ QC+ FW CVW K CC Sbjct: 606 LMKKVHQCENYPKFWSNICVWPAKQRACC 520
>LOC_Os10g31950:12010.t02517:unspliced-genomic 3-ketoacyl-CoA thiolase 2, peroxisomal precursor, putative,| expressed Length = 4424 Score = 30.9 bits (61), Expect = 10.0 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = -1 / +2 Query: 432 PKVSAMNRPRCHVTNHSQNCDWRAGGEGKWASSSPMLEKKSPVKLLPLISGMLDGASHPI 253 P S+ + P T+H + + + KWA SSP +K P P + + S I Sbjct: 83 PSSSSRHGPHGFFTSHISHSHRSSQLQLKWAPSSPTTPRKKPRSTRPPTT*LPSFLSLEI 262 Query: 252 SPNP 241 P+P Sbjct: 263 FPHP 274
>LOC_Os09g01600:12009.t00062:unspliced-genomic expressed protein| Length = 4756 Score = 30.9 bits (61), Expect = 10.0 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 547 CVQCKICHAFWFRACVWLRKPCDCCL 624 C+Q +C +RAC+W + C C L Sbjct: 950 CLQI*MCVCTVWRACIWTHRCCMCLL 1027
>LOC_Os07g03910:12007.t00280:unspliced-genomic hexose carrier protein HEX6, putative, expressed| Length = 1730 Score = 30.9 bits (61), Expect = 10.0 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -1 / +3 Query: 423 SAMNRPRCHVTNHSQNCDWRAGGEGKWASSSPMLEKKSPVKLLPLISGMLDGASH 259 S+ RPR ++ S +C G G +S +P ++ L+P+ S L +H Sbjct: 1395 SSCRRPRGCPSSRSGSCGRATGSGGGSSSPTPATARRKAEPLMPISSEQLISCAH 1559
>LOC_Os06g24150:12006.t02227:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1851 Score = 30.9 bits (61), Expect = 10.0 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 / +2 Query: 363 AGGEGKWASSSPMLEKKSPVKLLPLISGMLDGASHPISP 247 A G A +P+ + + P+ LLP + G +DG S +P Sbjct: 92 ASGHIVSAEVNPVADNRRPIILLPRLDGSVDGRSTAAAP 208
>LOC_Os06g10280:12006.t00906:unspliced-genomic AAPT1, putative, expressed| Length = 9337 Score = 30.9 bits (61), Expect = 10.0 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +1 / +3 Query: 463 LLPEVVD*LAFGSCMCVVLTCAGLLLRMCVQCKICHAFW 579 L+ +++ * A G+C+C++L+C + M + H W Sbjct: 234 LVRDLLG*CAVGTCVCLILSCGSVGSSMGEGIEFGHTIW 350
>LOC_Os05g40410:12005.t03580:unspliced-genomic expressed protein| Length = 4124 Score = 30.9 bits (61), Expect = 10.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 / +1 Query: 313 LLLQHRRGARPLPLAPGSPVAVLAV 387 LL + R GA P APGSP VLA+ Sbjct: 376 LLHERRAGALPQHTAPGSPARVLAL 450
>LOC_Os01g07570:12001.t00637:unspliced-genomic carboxyl-terminal proteinase, putative, expressed| Length = 5890 Score = 30.9 bits (61), Expect = 10.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 / +1 Query: 271 VEHPADQRQQLDGALLLQHRRGARPLPLAP 360 + HP + +L LLL+ R RPLPL P Sbjct: 5269 LRHPGRLQPRLGQLLLLRRPRAQRPLPLEP 5358 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 226,994,447 Number of extensions: 3687046 Number of successful extensions: 20225 Number of sequences better than 10.0: 55 Length of query: 232 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 183 Effective length of database: 52,856,264 Effective search space: 9672696312 Effective search space used: 9672696312 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
