| Clone Name | FLbaf117i11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ286564.1| Triticum aestivum putative membrane protein mRNA, complete cds Length = 659 Score = 971 bits (490), Expect = 0.0 Identities = 606/640 (94%), Gaps = 6/640 (0%) Strand = Plus / Plus Query: 19 gcatcgcagcacaccagcttagaccatggccaccgccacctccaccgtctacggcctcgc 78 |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct: 8 gcatcgcagcacaccagcttagac-atggccgccgccacctccaccgtctccggcctcgc 66 Query: 79 cggcgccgcactcgcccgccggccagccttctctaccagcttcacgagtggcggccgggt 138 ||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 67 cggcgccgcgctcacccgccggccagccttctctaccagcttcacgagtggtgcccgggt 126 Query: 139 gtcggcgaggaacccgctgatgacgaggaacctggagaggaacggcagaatcacctgcat 198 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 127 gtcggcgaggaacccgctgatgacgaggaacctggagaggaacggcaggatcacctgcat 186 Query: 199 gacgttcccacgggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgg 258 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 187 gacgttcccgcgggactggctgcggagggacctgaacgtgatcgggttcgggctgattgg 246 Query: 259 gtggctggcgccgtcgagcatcccgctgatcaacggcaacagcttgacggggctcttctt 318 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gtggctggcaccgtcgagcatcccgctgatcaacggcaacagcttgacggggctcttctt 306 Query: 319 ctccagcatcggcgaggagctcgcccacttcccctcgcccccggctctccagtcgcagtt 378 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 ctccagcatcggcgaggagctcgcccacttcccgtcgcccccggctctccagtcgcagtt 366 Query: 379 ctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagat 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagat 426 Query: 439 cgggttcaagggcaggaccgaggactacttccagaagtagtggattaactagcttttgga 498 |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||| Sbjct: 427 cgggttcaagggcaggaccgaggactacttccagaagtagcgaattaactagc-tttggt 485 Query: 499 tcatgcatgtgcgtcgtcctt--acttgtgctgggctacttctgcgcatgtgtgttcaat 556 || |||||||||||||||||| || | ||||| |||||||||||| ||||||||| Sbjct: 486 tcgtgcatgtgcgtcgtccttgggctgctcaagggctgcttctgcgcatgcgtgttcaat 545 Query: 557 gtaaaatctgtcatgccttctggtttcgtgcatgcgtgtggcttcgcaagccgtgtgatt 616 |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 546 gtaaaatctgccatgccttttggttttgtgcatgcgtgtggcttcgcaagccgtgtgatt 605 Query: 617 gctgtttgttaattgcccctcttccatgctaagcacaaaa 656 |||||||||||||| ||||||||||| ||||||||||| Sbjct: 606 gctgtttgttaatt--acctcttccatggtaagcacaaaa 643
>emb|CT830376.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA005F15, full insert sequence Length = 655 Score = 557 bits (281), Expect = e-155 Identities = 380/413 (92%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 116 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 68 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 127 Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 187 Query: 177 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 236 |||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 188 ggaacggcaggatcacctgcatgacgtttccgcgggactggcttaggagggacctgaacg 247 Query: 237 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 296 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 248 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 307 Query: 297 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 356 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 308 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 367 Query: 357 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 416 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 368 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 427 Query: 417 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 428 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 480
>ref|NM_001059290.1| Oryza sativa (japonica cultivar-group) Os04g0414700 (Os04g0414700) mRNA, complete cds Length = 645 Score = 541 bits (273), Expect = e-150 Identities = 378/413 (91%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 116 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 77 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 136 Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 137 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 196 Query: 177 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 236 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 197 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 256 Query: 237 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 296 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 257 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 316 Query: 297 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 356 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 317 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 376 Query: 357 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 416 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 377 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 436 Query: 417 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 437 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 489
>dbj|AK059990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A12, full insert sequence Length = 1192 Score = 541 bits (273), Expect = e-150 Identities = 378/413 (91%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 116 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 605 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 664 Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 665 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 724 Query: 177 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 236 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 725 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 784 Query: 237 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 296 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 785 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 844 Query: 297 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 356 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 845 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 904 Query: 357 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 416 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 905 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 964 Query: 417 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 965 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 1017
>dbj|AK058848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-G12, full insert sequence Length = 645 Score = 541 bits (273), Expect = e-150 Identities = 378/413 (91%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctctacca 116 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| ||| Sbjct: 77 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctccaccg 136 Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 137 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 196 Query: 177 ggaacggcagaatcacctgcatgacgttcccacgggactggctgcggagggacctgaacg 236 |||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||| Sbjct: 197 ggaacggcaggatcacctgcatgacgtttccgcaggactggcttaggagggacctgaacg 256 Query: 237 tgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggca 296 |||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 257 tgatcgggttcgggctgatcgggtggatcgcgccgtcgagcgtcccggcgatcaacggca 316 Query: 297 acagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcgc 356 ||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 317 acagcctcacggggctcttcttctccagcatcggccaggagctctcccacttcccctcgc 376 Query: 357 ccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttca 416 | ||||| ||| | |||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 377 cgccggcgctcgactcgccgttctggctgtggttggtgacgtggcaccttgggctgttcc 436 Query: 417 tcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 437 tggcgctcaccttcggccagatcgggttcaagggcaggaccgagggctacttc 489
>gb|DQ244345.1| Zea mays clone 5310 mRNA sequence Length = 745 Score = 448 bits (226), Expect = e-122 Identities = 382/434 (88%) Strand = Plus / Plus Query: 43 catggccaccgccacctccaccgtctacggcctcgccggcgccgcactcgcccgccggcc 102 ||||||| || || |||||||||||| |||||||||||||||| | || ||| |||| || Sbjct: 129 catggccgcctccgcctccaccgtctccggcctcgccggcgcctccctggccagccgccc 188 Query: 103 agccttctctaccagcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgac 162 || ||||| |||||||||||| | ||| |||||||||||||||||||||| ||||||| Sbjct: 189 ggcgttctccaccagcttcacgcggggcagccgggtgtcggcgaggaaccccctgatgag 248 Query: 163 gaggaacctggagaggaacggcagaatcacctgcatgacgttcccacgggactggctgcg 222 ||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| Sbjct: 249 caggaacctggagaggaatggcaggatcacctgcatgacgtttccccgggactggctgcg 308 Query: 223 gagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatccc 282 ||||||||||| ||| ||||| |||||||| ||||| ||| ||| |||||| ||| |||| Sbjct: 309 gagggacctgagcgtcatcggcttcgggctcatcggctggatggggccgtccagcgtccc 368 Query: 283 gctgatcaacggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgc 342 | ||||||||||||||| | ||||||||||||||||||||||||||| ||||||| || Sbjct: 369 ggccatcaacggcaacagcctcacggggctcttcttctccagcatcggccaggagctggc 428 Query: 343 ccacttcccctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggca 402 |||||||||| |||||||| | || || ||||||||||||||| | ||||||||||| Sbjct: 429 ccacttccccacgcccccgcccgtcacctcccagttctggctgtggctagtgacgtggca 488 Query: 403 cctgggtctgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgagga 462 |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 489 cctgggcctgttcatcgtgctcaccttcggccagatcggattcaagggcaggaccgagga 548 Query: 463 ctacttccagaagt 476 ||||||| |||||| Sbjct: 549 ctacttcgagaagt 562
>gb|AY105449.1| Zea mays PCO139896 mRNA sequence Length = 911 Score = 448 bits (226), Expect = e-122 Identities = 382/434 (88%) Strand = Plus / Plus Query: 43 catggccaccgccacctccaccgtctacggcctcgccggcgccgcactcgcccgccggcc 102 ||||||| || || |||||||||||| |||||||||||||||| | || ||| |||| || Sbjct: 276 catggccgcctccgcctccaccgtctccggcctcgccggcgcctccctggccagccgccc 335 Query: 103 agccttctctaccagcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgac 162 || ||||| |||||||||||| | ||| |||||||||||||||||||||| ||||||| Sbjct: 336 ggcgttctccaccagcttcacgcggggcagccgggtgtcggcgaggaaccccctgatgag 395 Query: 163 gaggaacctggagaggaacggcagaatcacctgcatgacgttcccacgggactggctgcg 222 ||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| Sbjct: 396 caggaacctggagaggaatggcaggatcacctgcatgacgtttccccgggactggctgcg 455 Query: 223 gagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatccc 282 ||||||||||| ||| ||||| |||||||| ||||| ||| ||| |||||| ||| |||| Sbjct: 456 gagggacctgagcgtcatcggcttcgggctcatcggctggatggggccgtccagcgtccc 515 Query: 283 gctgatcaacggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgc 342 | ||||||||||||||| | ||||||||||||||||||||||||||| ||||||| || Sbjct: 516 ggccatcaacggcaacagcctcacggggctcttcttctccagcatcggccaggagctggc 575 Query: 343 ccacttcccctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggca 402 |||||||||| |||||||| | || || ||||||||||||||| | ||||||||||| Sbjct: 576 ccacttccccacgcccccgcccgtcacctcccagttctggctgtggctagtgacgtggca 635 Query: 403 cctgggtctgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgagga 462 |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 636 cctgggcctgttcatcgtgctcaccttcggccagatcggattcaagggcaggaccgagga 695 Query: 463 ctacttccagaagt 476 ||||||| |||||| Sbjct: 696 ctacttcgagaagt 709
>emb|CR855098.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0622F05, complete sequence Length = 69925 Score = 218 bits (110), Expect = 2e-53 Identities = 158/174 (90%) Strand = Plus / Plus Query: 209 cgggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgggtggctggcg 268 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 29424 cgggactggcttaggagggacctgaacgtgatcgggttcgggctgatcgggtggatcgcg 29483 Query: 269 ccgtcgagcatcccgctgatcaacggcaacagcttgacggggctcttcttctccagcatc 328 ||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| Sbjct: 29484 ccgtcgagcgtcccggcgatcaacggcaacagcctcacggggctcttcttctccagcatc 29543 Query: 329 ggcgaggagctcgcccacttcccctcgcccccggctctccagtcgcagttctgg 382 ||| |||||||| |||||||||||||||| ||||| ||| | |||| ||||||| Sbjct: 29544 ggccaggagctctcccacttcccctcgccgccggcgctcgactcgccgttctgg 29597 Score = 141 bits (71), Expect = 4e-30 Identities = 83/87 (95%) Strand = Plus / Plus Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29224 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 29283 Query: 177 ggaacggcagaatcacctgcatgacgt 203 |||||||||| |||||||||||||||| Sbjct: 29284 ggaacggcaggatcacctgcatgacgt 29310 Score = 137 bits (69), Expect = 6e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 381 ggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagatcg 440 ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||| Sbjct: 29712 ggctgtggttggtgacgtggcaccttgggctgttcctggcgctcaccttcggccagatcg 29771 Query: 441 ggttcaagggcaggaccgaggactacttc 469 ||||||||||||||||||||| ||||||| Sbjct: 29772 ggttcaagggcaggaccgagggctacttc 29800 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctc 111 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| Sbjct: 29077 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctc 29131
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 214 bits (108), Expect = 3e-52 Identities = 156/172 (90%) Strand = Plus / Plus Query: 211 ggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgcc 270 ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 20505472 ggactggcttaggagggacctgaacgtgatcgggttcgggctgatcgggtggatcgcgcc 20505531 Query: 271 gtcgagcatcccgctgatcaacggcaacagcttgacggggctcttcttctccagcatcgg 330 ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 20505532 gtcgagcgtcccggcgatcaacggcaacagcctcacggggctcttcttctccagcatcgg 20505591 Query: 331 cgaggagctcgcccacttcccctcgcccccggctctccagtcgcagttctgg 382 | |||||||| |||||||||||||||| ||||| ||| | |||| ||||||| Sbjct: 20505592 ccaggagctctcccacttcccctcgccgccggcgctcgactcgccgttctgg 20505643 Score = 137 bits (69), Expect = 6e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 381 ggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagatcg 440 ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||| Sbjct: 20505758 ggctgtggttggtgacgtggcaccttgggctgttcctggcgctcaccttcggccagatcg 20505817 Query: 441 ggttcaagggcaggaccgaggactacttc 469 ||||||||||||||||||||| ||||||| Sbjct: 20505818 ggttcaagggcaggaccgagggctacttc 20505846 Score = 133 bits (67), Expect = 9e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 20505270 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 20505329 Query: 177 ggaacggcagaatcacctgcatgacgt 203 |||||||||| |||||||||||||||| Sbjct: 20505330 ggaacggcaggatcacctgcatgacgt 20505356 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctc 111 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| Sbjct: 20505123 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctc 20505177 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atggccaccgccacctccacc 64 ||||||||||||||||||||| Sbjct: 16136546 atggccaccgccacctccacc 16136566
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 214 bits (108), Expect = 3e-52 Identities = 156/172 (90%) Strand = Plus / Plus Query: 211 ggactggctgcggagggacctgaacgtgatcgggttcgggctgatcgggtggctggcgcc 270 ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 16100 ggactggcttaggagggacctgaacgtgatcgggttcgggctgatcgggtggatcgcgcc 16159 Query: 271 gtcgagcatcccgctgatcaacggcaacagcttgacggggctcttcttctccagcatcgg 330 ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 16160 gtcgagcgtcccggcgatcaacggcaacagcctcacggggctcttcttctccagcatcgg 16219 Query: 331 cgaggagctcgcccacttcccctcgcccccggctctccagtcgcagttctgg 382 | |||||||| |||||||||||||||| ||||| ||| | |||| ||||||| Sbjct: 16220 ccaggagctctcccacttcccctcgccgccggcgctcgactcgccgttctgg 16271 Score = 137 bits (69), Expect = 6e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 381 ggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccagatcg 440 ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||| Sbjct: 16386 ggctgtggttggtgacgtggcaccttgggctgttcctggcgctcaccttcggccagatcg 16445 Query: 441 ggttcaagggcaggaccgaggactacttc 469 ||||||||||||||||||||| ||||||| Sbjct: 16446 ggttcaagggcaggaccgagggctacttc 16474 Score = 133 bits (67), Expect = 9e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 117 gcttcacgagtggcggccgggtgtcggcgaggaacccgctgatgacgaggaacctggaga 176 ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 15898 gcttcacgacgggcgcccgggtgtcggcgaggaacccgctgctgacgaggaacctggaga 15957 Query: 177 ggaacggcagaatcacctgcatgacgt 203 |||||||||| |||||||||||||||| Sbjct: 15958 ggaacggcaggatcacctgcatgacgt 15984 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 57 cctccaccgtctacggcctcgccggcgccgcactcgcccgccggccagccttctc 111 |||||||||||| |||||||||||||||| | |||||||||||||| |||||||| Sbjct: 15751 cctccaccgtctccggcctcgccggcgccaccctcgcccgccggccggccttctc 15805
>emb|CT987698.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 896 Score = 91.7 bits (46), Expect = 3e-15 Identities = 187/234 (79%) Strand = Plus / Minus Query: 236 gtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggc 295 ||||| ||||||||||||||||||||||| || || || ||| | ||| |||| ||||| Sbjct: 517 gtgattgggttcgggctgatcgggtggctcgctccatccagcgttccggcgatcgacggc 458 Query: 296 aacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcg 355 || ||| ||||||||||||||||| ||||| || | |||||||| ||||||||| || Sbjct: 457 aagagcctgacggggctcttcttcgagagcattgggaacgagctcgctcacttccccacg 398 Query: 356 cccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttc 415 || || | ||| || | |||||| ||||| || | || |||||||||||||||||| Sbjct: 397 cctcccccgctcgcttccccattctggttgtggctgatcacatggcacctgggtctgttc 338 Query: 416 atcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||||||||||| || ||||| |||||||| |||||||| || |||||| Sbjct: 337 ttgtgcctcaccttcggtcaaatcggcttcaaggggaggaccgacgattacttc 284
>emb|CT984791.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 681 Score = 81.8 bits (41), Expect = 3e-12 Identities = 185/233 (79%) Strand = Plus / Minus Query: 236 gtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatcaacggc 295 ||||| ||||||||||||||||||||||| || || || ||| | ||| |||| ||||| Sbjct: 517 gtgattgggttcgggctgatcgggtggctcgctccatccagcgttccggcgatcgacggc 458 Query: 296 aacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcccctcg 355 || ||| ||||||||||||| ||| ||||| || | |||||||| ||||||||| || Sbjct: 457 aagagcctgacggggctcttgttcgagagcattgggaacgagctcgctcacttccccacg 398 Query: 356 cccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtctgttc 415 || || | ||| || | |||||| ||||| || | || |||||||||||||||||| Sbjct: 397 cctcccccgctcgcttccccattctggttgtggctgatcacatggcacctgggtctgttc 338 Query: 416 atcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactactt 468 | ||||||||||| || ||||| |||||||| |||||||| || ||||| Sbjct: 337 ttgtgcctcaccttcggtcaaatcggcttcaaggggaggaccgacgattactt 285
>gb|AY087368.1| Arabidopsis thaliana clone 34623 mRNA, complete sequence Length = 598 Score = 77.8 bits (39), Expect = 5e-11 Identities = 189/239 (79%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 271 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 330 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 331 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 390 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 391 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 450 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| ||||| |||||| Sbjct: 451 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaggattacttc 509
>ref|NM_100711.2| Arabidopsis thaliana unknown protein (AT1G08380) mRNA, complete cds Length = 655 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 271 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 330 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 331 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 390 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 391 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 450 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 451 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 509
>gb|BT000191.1| Arabidopsis thaliana expressed protein (At1g08380) mRNA, complete cds Length = 474 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 182 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 241 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 242 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 301 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 302 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 361 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 362 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 420
>gb|AY091345.1| Arabidopsis thaliana unknown protein (At1g08380) mRNA, complete cds Length = 454 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 182 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 241 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 242 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 301 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 302 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 361 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 362 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 420
>gb|AY050960.1| Arabidopsis thaliana unknown protein (At1g08380) mRNA, complete cds Length = 550 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 206 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 265 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 266 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 325 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 326 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 385 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 386 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 444
>gb|AY136345.1| Arabidopsis thaliana expressed protein (At1g08380) mRNA, complete cds Length = 534 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 206 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 265 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 266 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 325 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 326 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 385 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 386 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 444
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Minus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 22079 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 22020 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 22019 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 21960 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 21959 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 21900 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 21899 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 21841
>emb|BX818101.1|CNS0ADVW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 540 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 212 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 271 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 272 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 331 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 332 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 391 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 392 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 450
>emb|BX814418.1|CNS0AAQN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 522 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 194 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 253 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 254 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 313 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 314 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 373 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 374 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 432
>emb|BX841789.1|CNS09Y7L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 189 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 248 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 249 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 308 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 309 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 368 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 369 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 427
>emb|AJ493060.1|ATH493060 Arabidopsis thaliana mRNA for photosystem I subunit O (psaO gene) Length = 558 Score = 69.9 bits (35), Expect = 1e-08 Identities = 188/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 213 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 272 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 273 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 332 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 333 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 392 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 393 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 451
>emb|BX818690.1|CNS0ACKT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 67.9 bits (34), Expect = 5e-08 Identities = 178/226 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 187 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 246 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 247 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 306 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| | || | Sbjct: 307 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcacttaggcc 366 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggac 456 | ||| || ||||| ||||| || ||||| |||||||||||||| Sbjct: 367 tcttcctctgcctcactttcggacaaatcggattcaagggcaggac 412
>emb|BX814042.1|CNS0ADIH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 61.9 bits (31), Expect = 3e-06 Identities = 187/239 (78%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcatcccgctgatca 290 |||||||| | || || ||||||||||| ||||| || ||||||||||| || ||| | Sbjct: 213 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcattccagcgataa 272 Query: 291 acggcaacagcttgacggggctcttcttctccagcatcggcgaggagctcgcccacttcc 350 | || || ||| ||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 273 atgggaagagcctgacgggtctcttcttcgatagcatcggaactgagctcgctcacttcc 332 Query: 351 cctcgcccccggctctccagtcgcagttctggctgtggttggtgacgtggcacctgggtc 410 | | || || |||||| || ||||||||| |||||||||| ||||||||| || | Sbjct: 333 cgactcctccagctctcacttcacagttctggttgtggttggttacgtggcactaaggcc 392 Query: 411 tgttcatcgcgctcaccttcggccagatcgggttcaagggcaggaccgaggactacttc 469 | ||| || ||||| ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 393 tcttcctctgcctcactttcggacaaatcggattcaagggcaggactgaagattacttc 451
>emb|BX814740.1|CNS0ADI3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 531 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 374 cagttctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggc 433 ||||||||| |||||||||| ||||||||| || || ||| || | ||||| ||||| Sbjct: 348 cagttctggttgtggttggttacgtggcactgaggcctcttcctctccctcactttcgga 407 Query: 434 cagatcgggttcaagggcaggaccgaggactacttc 469 || ||||| |||||||||||||| || || |||||| Sbjct: 408 caaatcggattcaagggcaggactgaagattacttc 443 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcat 279 |||||||| | || || ||||||||||| ||||| || ||||||||||| Sbjct: 205 tgaacgtggtaggatttgggctgatcggatggctcgctccgtcgagcat 253
>gb|DQ099068.1| Arachis stenosperma clone AS2ML1G04 microsatellite sequence Length = 322 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 374 cagttctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggc 433 ||||| ||| ||||| |||| |||||||||||||| || ||| || |||||||| ||| Sbjct: 108 cagttttggttgtggctggttacgtggcacctgggcctcttcctctgcctcacctttggc 167 Query: 434 cagatcgggttcaagggcaggaccgaggactactt 468 || || || |||||||| ||||| || |||||||| Sbjct: 168 caaattggattcaagggaaggactgaagactactt 202
>ref|NM_001073892.1| Oryza sativa (japonica cultivar-group) Os12g0635700 (Os12g0635700) mRNA, complete cds Length = 1164 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 gaccatggccaccgccacctccaccg 65 |||||||||| ||||||||||||||| Sbjct: 35 gaccatggccgccgccacctccaccg 60
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 gaccatggccaccgccacctccaccg 65 |||||||||| ||||||||||||||| Sbjct: 27286983 gaccatggccgccgccacctccaccg 27286958
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ctcgccggcgccgcactcgcccgccg 99 ||||||| |||||||||||||||||| Sbjct: 6021608 ctcgccgccgccgcactcgcccgccg 6021633
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 caccgtctacggcctcgccggcgccg 86 |||||||||||| ||||||||||||| Sbjct: 8290558 caccgtctacgggctcgccggcgccg 8290533
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 tctacggcctcgccggcgccgc 87 |||||||||||||||||||||| Sbjct: 5005353 tctacggcctcgccggcgccgc 5005332
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ctcgccggcgccgcactcgcccgccg 99 ||||||| |||||||||||||||||| Sbjct: 26107 ctcgccgccgccgcactcgcccgccg 26132
>dbj|AB015862.1| Arabidopsis thaliana mRNA for phytochrome-regulated gene product, partial sequence Length = 240 Score = 44.1 bits (22), Expect = 0.66 Identities = 74/92 (80%) Strand = Plus / Plus Query: 378 tctggctgtggttggtgacgtggcacctgggtctgttcatcgcgctcaccttcggccaga 437 ||||| |||||||||| ||||||||| | || || ||| || || || ||||| || | Sbjct: 8 tctggttgtggttggttacgtggcacttaggcctcttcctctgcctmactttcggacaaa 67 Query: 438 tcgggttcaagggcaggaccgaggactacttc 469 |||| |||||||||||||| || || |||||| Sbjct: 68 tcggattcaagggcaggactgaagattacttc 99
>dbj|AK108161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G12, full insert sequence Length = 1164 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 gaccatggccaccgccacctccaccg 65 |||||||||| ||||||||||||||| Sbjct: 35 gaccatggccgccgccacctccaccg 60
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 gaccatggccaccgccacctccaccg 65 |||||||||| ||||||||||||||| Sbjct: 100015 gaccatggccgccgccacctccaccg 99990
>emb|CR855227.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159H11-OSIGBa0137A07, complete sequence Length = 144811 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atggccaccgccacctccacc 64 ||||||||||||||||||||| Sbjct: 49146 atggccaccgccacctccacc 49166
>ref|XM_001221056.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01836) mRNA, complete cds Length = 2142 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gccaccgccacctccaccgtc 67 ||||||||||||||||||||| Sbjct: 1192 gccaccgccacctccaccgtc 1212
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ggccaccgccacctccaccgt 66 ||||||||||||||||||||| Sbjct: 3460708 ggccaccgccacctccaccgt 3460688
>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence Length = 42022 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 cgccggcgccgcactcgcccgccgg 100 |||||||||||||| |||||||||| Sbjct: 34149 cgccggcgccgcacccgcccgccgg 34173
>ref|NM_105682.2| Arabidopsis thaliana ATFH8; actin binding / actin filament binding / profilin binding (ATFH8) mRNA, complete cds Length = 2465 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 accatggccaccgccacctccaccg 65 ||||| ||||||||||||||||||| Sbjct: 977 accatcgccaccgccacctccaccg 1001
>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence Length = 233077 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 accatggccaccgccacctcc 61 ||||||||||||||||||||| Sbjct: 121661 accatggccaccgccacctcc 121641
>ref|NM_136455.1| Drosophila melanogaster CG2093-RA (CG2093), mRNA Length = 9933 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ggccaccgccacctccaccgt 66 ||||||||||||||||||||| Sbjct: 3669 ggccaccgccacctccaccgt 3649
>gb|AY050956.2| Arabidopsis thaliana At1g70140 mRNA sequence Length = 2187 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 accatggccaccgccacctccaccg 65 ||||| ||||||||||||||||||| Sbjct: 977 accatcgccaccgccacctccaccg 1001
>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone BACR04H12, complete sequence Length = 175285 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ggccaccgccacctccaccgt 66 ||||||||||||||||||||| Sbjct: 66390 ggccaccgccacctccaccgt 66370
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atggccaccgccacctccacc 64 ||||||||||||||||||||| Sbjct: 97296 atggccaccgccacctccacc 97316
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ggccaccgccacctccaccgt 66 ||||||||||||||||||||| Sbjct: 166897 ggccaccgccacctccaccgt 166877
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 gtgatcgggttcgggctgatcgggtggct 264 ||||||||||||||| ||||||| ||||| Sbjct: 235 gtgatcgggttcgggttgatcggatggct 207
>emb|BX813728.1|CNS0ADHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 485 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 231 tgaacgtgatcgggttcgggctgatcgggtggctggcgccgtcgagcat 279 |||||||| | || || ||||||||||| ||||| || ||||||||||| Sbjct: 164 tgaacgtggtaggatttgggctgatcggatggctagctccgtcgagcat 212
>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete sequence Length = 114505 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 accatggccaccgccacctccaccg 65 ||||| ||||||||||||||||||| Sbjct: 48434 accatcgccaccgccacctccaccg 48458 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 95,894,913 Number of extensions: 5031678 Number of successful extensions: 115917 Number of sequences better than 10.0: 50 Number of HSP's gapped: 115900 Number of HSP's successfully gapped: 66 Length of query: 696 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 674 Effective length of database: 18,508,616,841 Effective search space: 12474807750834 Effective search space used: 12474807750834 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)