ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf127m01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK071545:Os01g0262500 323 1e-88
2AK103291:Os01g0768200 51 2e-06
3AK102064:Os05g0485300 38 0.014
4AK109102: 36 0.052
5AK074020:Os02g0141300 30 2.8
6AK067279:Os02g0141300 30 2.8
7AK121185:Os12g0595800 30 3.7

>AK071545:Os01g0262500 |
          Length = 221
 Score =  323 bits (828), Expect = 1e-88
 Identities = 161/207 (77%), Positives = 178/207 (85%)
 Frame = +2

Query: 113 VVTGLAFWSTAFLVMRALMPKRSYEFCNRAVSTMHAVAAVCMACLSVEDWSCPVCPLNAP 292
           VV+G+AFW TAFL+ R   PKRSY+FCNRAVS  HA AAV +ACLSV DWS P+ PL A 
Sbjct: 1   VVSGVAFWWTAFLLARGAFPKRSYDFCNRAVSAAHAAAAVSLACLSVADWSRPLSPLAAA 60

Query: 293 SSPRQMKSLAVTLSYMIYDAVCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMAC 472
           SSP QMK+LAVTLSYM+YDA C +LN DVR+DNTVHHLVSIVGI AGLAY+RCGTEM+A 
Sbjct: 61  SSPPQMKALAVTLSYMVYDAACCYLNDDVRVDNTVHHLVSIVGIAAGLAYRRCGTEMVAS 120

Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDILFAATFSVGRMVGGPYLTYVTLTTDYP 652
           +F+TEISSPLLHLRE+LKE GIKDTDLNLLVDILFA  FSV RM  GPYLTYVT+T D P
Sbjct: 121 LFVTEISSPLLHLREILKEFGIKDTDLNLLVDILFAVIFSVARMGFGPYLTYVTVTADNP 180

Query: 653 ILIKAMAAGLQLVSAYWFLRILRMVRY 733
           ILIKAMA GLQLVSAYWFLRILRMVR+
Sbjct: 181 ILIKAMATGLQLVSAYWFLRILRMVRH 207



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>AK103291:Os01g0768200 |
          Length = 275

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
 Frame = +2

Query: 185 EFCNRAVSTMHAVAAVCMACLSVEDWSCPVCPLNAPSSPRQMK----SLAVTLSYMIYDA 352
           E+ NR +ST+HA+    M+   V   +     L+ P + R       +L V+L Y I D 
Sbjct: 73  EWNNRGMSTVHAMFITLMSVYLVFFSNLFSDELDGPVTVRSSNLSNFTLGVSLGYFIADL 132

Query: 353 VC-----SHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMACMFITEISSPLLHLRE 517
                    L G   ++  +HHL+SI+ +   + Y   G      + I+E ++P ++LR 
Sbjct: 133 AMLSWAYPSLGG---MEYVLHHLLSIISLVYAI-YSEEGQLYTYMVLISETTTPGINLRW 188

Query: 518 MLKELGIKDTDLNLLVDILFAATFSVGRMVGGPYLTY---------VTLTTDYPILIKAM 670
            L  +G+K +   L+  +     + V R++   YL Y           + T   ILI A+
Sbjct: 189 FLDTVGMKRSKAYLVNGVTMFVAWLVARIILFIYLFYHIYFHIDQVKQMRTFSCILIFAV 248

Query: 671 AAGLQLVSAYWFLRILR 721
              L +++  WF++ILR
Sbjct: 249 PTILLVMNTVWFVKILR 265



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>AK102064:Os05g0485300 |
          Length = 263

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 16/195 (8%)
 Frame = +2

Query: 185 EFCNRAVSTMHAVAAVCMA--CLSVED-WSCPVCPLNAPSSPRQMKS--LAVTLSYMIYD 349
           E+ NR  ST HA+ A  ++   L + D +S  V           M      V+L Y + D
Sbjct: 52  EWNNRGFSTFHALVAAVVSFYLLVISDLFSKDVHGAIIIDRKSWMSDAMFGVSLGYFLTD 111

Query: 350 A--VCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMACMFITEISSPLLHLREML 523
              +  H       +  +HH +S+  I   L   + G   +  + ITE ++P ++LR  L
Sbjct: 112 LLMILWHFPSLGGKEYLLHHGLSMYAISLALLSGK-GHVYILMVLITEATTPFVNLRWYL 170

Query: 524 KELGIKDTDLNLLVDILFAATFSVGRMV------GGPYLTYVTLTTDYPILIKAMAA--- 676
              G KD+ L L   +   A + V R++         YL +  + T +P+   +M A   
Sbjct: 171 DLAGRKDSKLYLYNGVALFAGWLVARVILFVYFFAHVYLHFDQVRTVFPLGFYSMMAVPP 230

Query: 677 GLQLVSAYWFLRILR 721
            +  ++  WF +I +
Sbjct: 231 AMSAMNLLWFRKICK 245



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>AK109102: |
          Length = 320

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 24/59 (40%), Positives = 27/59 (45%)
 Frame = +1

Query: 19  PIDRPSIYIVQVRSPRWVGTYRNDGGLRAELRGDRAGLLVDGVPGDAGADAEALLRVLQ 195
           P   P  Y V V SP+W    R  GG+ A+LRG  A     G  GD G    A L V Q
Sbjct: 250 PQRAPFPYPVTVTSPQWTDAERA-GGIDAKLRGRAAASAAAGAAGDGGDAKAAELAVAQ 307



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>AK074020:Os02g0141300 |
          Length = 996

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +2

Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDIL 574
           +F TEISSP LH+R++L + G    D  L VD L
Sbjct: 67  VFTTEISSPNLHIRKVLLDCGAVQADA-LTVDRL 99



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>AK067279:Os02g0141300 |
          Length = 996

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +2

Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDIL 574
           +F TEISSP LH+R++L + G    D  L VD L
Sbjct: 67  VFTTEISSPNLHIRKVLLDCGAVQADA-LTVDRL 99



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>AK121185:Os12g0595800 |
          Length = 725

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 23/55 (41%), Positives = 29/55 (52%)
 Frame = +2

Query: 44  SSKSGLRAGWGRIETMEDFVLSYVVTGLAFWSTAFLVMRALMPKRSYEFCNRAVS 208
           S+ + LR   G   TME   LSY V G +F STA   + +L+P      CNR VS
Sbjct: 72  STAALLRPTNGTSTTMEP--LSYAVVGKSFNSTASTFVVSLLPS-----CNRTVS 119


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,062,152
Number of extensions: 545063
Number of successful extensions: 1665
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1665
Number of HSP's successfully gapped: 7
Length of query: 347
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 246
Effective length of database: 11,355,714
Effective search space: 2793505644
Effective search space used: 2793505644
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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