| Clone Name | FLbaf127m01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071545:Os01g0262500 | 323 | 1e-88 | 2 | AK103291:Os01g0768200 | 51 | 2e-06 | 3 | AK102064:Os05g0485300 | 38 | 0.014 | 4 | AK109102: | 36 | 0.052 | 5 | AK074020:Os02g0141300 | 30 | 2.8 | 6 | AK067279:Os02g0141300 | 30 | 2.8 | 7 | AK121185:Os12g0595800 | 30 | 3.7 |
|---|
>AK071545:Os01g0262500 | Length = 221 Score = 323 bits (828), Expect = 1e-88 Identities = 161/207 (77%), Positives = 178/207 (85%) Frame = +2 Query: 113 VVTGLAFWSTAFLVMRALMPKRSYEFCNRAVSTMHAVAAVCMACLSVEDWSCPVCPLNAP 292 VV+G+AFW TAFL+ R PKRSY+FCNRAVS HA AAV +ACLSV DWS P+ PL A Sbjct: 1 VVSGVAFWWTAFLLARGAFPKRSYDFCNRAVSAAHAAAAVSLACLSVADWSRPLSPLAAA 60 Query: 293 SSPRQMKSLAVTLSYMIYDAVCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMAC 472 SSP QMK+LAVTLSYM+YDA C +LN DVR+DNTVHHLVSIVGI AGLAY+RCGTEM+A Sbjct: 61 SSPPQMKALAVTLSYMVYDAACCYLNDDVRVDNTVHHLVSIVGIAAGLAYRRCGTEMVAS 120 Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDILFAATFSVGRMVGGPYLTYVTLTTDYP 652 +F+TEISSPLLHLRE+LKE GIKDTDLNLLVDILFA FSV RM GPYLTYVT+T D P Sbjct: 121 LFVTEISSPLLHLREILKEFGIKDTDLNLLVDILFAVIFSVARMGFGPYLTYVTVTADNP 180 Query: 653 ILIKAMAAGLQLVSAYWFLRILRMVRY 733 ILIKAMA GLQLVSAYWFLRILRMVR+ Sbjct: 181 ILIKAMATGLQLVSAYWFLRILRMVRH 207
>AK103291:Os01g0768200 | Length = 275 Score = 50.8 bits (120), Expect = 2e-06 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 18/197 (9%) Frame = +2 Query: 185 EFCNRAVSTMHAVAAVCMACLSVEDWSCPVCPLNAPSSPRQMK----SLAVTLSYMIYDA 352 E+ NR +ST+HA+ M+ V + L+ P + R +L V+L Y I D Sbjct: 73 EWNNRGMSTVHAMFITLMSVYLVFFSNLFSDELDGPVTVRSSNLSNFTLGVSLGYFIADL 132 Query: 353 VC-----SHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMACMFITEISSPLLHLRE 517 L G ++ +HHL+SI+ + + Y G + I+E ++P ++LR Sbjct: 133 AMLSWAYPSLGG---MEYVLHHLLSIISLVYAI-YSEEGQLYTYMVLISETTTPGINLRW 188 Query: 518 MLKELGIKDTDLNLLVDILFAATFSVGRMVGGPYLTY---------VTLTTDYPILIKAM 670 L +G+K + L+ + + V R++ YL Y + T ILI A+ Sbjct: 189 FLDTVGMKRSKAYLVNGVTMFVAWLVARIILFIYLFYHIYFHIDQVKQMRTFSCILIFAV 248 Query: 671 AAGLQLVSAYWFLRILR 721 L +++ WF++ILR Sbjct: 249 PTILLVMNTVWFVKILR 265
>AK102064:Os05g0485300 | Length = 263 Score = 37.7 bits (86), Expect = 0.014 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 16/195 (8%) Frame = +2 Query: 185 EFCNRAVSTMHAVAAVCMA--CLSVED-WSCPVCPLNAPSSPRQMKS--LAVTLSYMIYD 349 E+ NR ST HA+ A ++ L + D +S V M V+L Y + D Sbjct: 52 EWNNRGFSTFHALVAAVVSFYLLVISDLFSKDVHGAIIIDRKSWMSDAMFGVSLGYFLTD 111 Query: 350 A--VCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQRCGTEMMACMFITEISSPLLHLREML 523 + H + +HH +S+ I L + G + + ITE ++P ++LR L Sbjct: 112 LLMILWHFPSLGGKEYLLHHGLSMYAISLALLSGK-GHVYILMVLITEATTPFVNLRWYL 170 Query: 524 KELGIKDTDLNLLVDILFAATFSVGRMV------GGPYLTYVTLTTDYPILIKAMAA--- 676 G KD+ L L + A + V R++ YL + + T +P+ +M A Sbjct: 171 DLAGRKDSKLYLYNGVALFAGWLVARVILFVYFFAHVYLHFDQVRTVFPLGFYSMMAVPP 230 Query: 677 GLQLVSAYWFLRILR 721 + ++ WF +I + Sbjct: 231 AMSAMNLLWFRKICK 245
>AK109102: | Length = 320 Score = 35.8 bits (81), Expect = 0.052 Identities = 24/59 (40%), Positives = 27/59 (45%) Frame = +1 Query: 19 PIDRPSIYIVQVRSPRWVGTYRNDGGLRAELRGDRAGLLVDGVPGDAGADAEALLRVLQ 195 P P Y V V SP+W R GG+ A+LRG A G GD G A L V Q Sbjct: 250 PQRAPFPYPVTVTSPQWTDAERA-GGIDAKLRGRAAASAAAGAAGDGGDAKAAELAVAQ 307
>AK074020:Os02g0141300 | Length = 996 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDIL 574 +F TEISSP LH+R++L + G D L VD L Sbjct: 67 VFTTEISSPNLHIRKVLLDCGAVQADA-LTVDRL 99
>AK067279:Os02g0141300 | Length = 996 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 473 MFITEISSPLLHLREMLKELGIKDTDLNLLVDIL 574 +F TEISSP LH+R++L + G D L VD L Sbjct: 67 VFTTEISSPNLHIRKVLLDCGAVQADA-LTVDRL 99
>AK121185:Os12g0595800 | Length = 725 Score = 29.6 bits (65), Expect = 3.7 Identities = 23/55 (41%), Positives = 29/55 (52%) Frame = +2 Query: 44 SSKSGLRAGWGRIETMEDFVLSYVVTGLAFWSTAFLVMRALMPKRSYEFCNRAVS 208 S+ + LR G TME LSY V G +F STA + +L+P CNR VS Sbjct: 72 STAALLRPTNGTSTTMEP--LSYAVVGKSFNSTASTFVVSLLPS-----CNRTVS 119 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,062,152 Number of extensions: 545063 Number of successful extensions: 1665 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1665 Number of HSP's successfully gapped: 7 Length of query: 347 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 246 Effective length of database: 11,355,714 Effective search space: 2793505644 Effective search space used: 2793505644 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)