ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf127m01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os01g15770:12001.t01428:unspliced-genomic expressed protein 110 1e-85
2LOC_Os08g43190:12008.t04044:unspliced-genomic sorbitol dehyd... 37 0.19
3LOC_Os12g35060:12012.t03194:unspliced-genomic expressed protein 34 1.8
4LOC_Os07g36700:12007.t03339:unspliced-genomic CSLF1 - cellul... 34 1.8
5LOC_Os07g36690:12007.t03338:unspliced-genomic CSLF2 - cellul... 34 1.8
6LOC_Os06g05440:12006.t00432:unspliced-genomic expressed protein 34 2.4
7LOC_Os09g26340:12009.t02313:unspliced-genomic histone H4, pu... 30 2.7
8LOC_Os05g06940:12005.t00584:unspliced-genomic relA-SpoT like... 26 3.3
9LOC_Os06g38930:12006.t03591:unspliced-genomic leucine-rich r... 33 4.5
10LOC_Os02g44230:12002.t04015:unspliced-genomic expressed protein 33 4.5
11LOC_Os02g32460:12002.t02889:unspliced-genomic molybdenum cof... 33 4.5
12LOC_Os02g04840:12002.t00382:unspliced-genomic ARA1, putative... 33 4.5
13LOC_Os11g47760:12011.t04270:unspliced-genomic heat shock cog... 32 6.2
14LOC_Os06g36500:12006.t03346:unspliced-genomic retrotransposo... 32 6.2
15LOC_Os05g21230:12005.t01884:unspliced-genomic retrotransposo... 32 6.2
16LOC_Os04g32140:12004.t02893:unspliced-genomic microneme prot... 32 6.2
17LOC_Os01g71220:12001.t06418:unspliced-genomic RING zinc fing... 32 6.2
18LOC_Os01g52970:12001.t04723:unspliced-genomic ribosomal RNA ... 32 6.2
19LOC_Os11g26840:12011.t02298:unspliced-genomic hypothetical p... 32 8.6
20LOC_Os10g37850:12010.t03043:unspliced-genomic armadillo-repe... 32 8.6
21LOC_Os07g03690:12007.t00258:unspliced-genomic pathogenesis-r... 32 8.6
22LOC_Os07g02674:12007.t00158:unspliced-genomic expressed protein 32 8.6
23LOC_Os06g30110:12006.t02715:unspliced-genomic retrotransposo... 32 8.6
24LOC_Os06g12020:12006.t01079:unspliced-genomic NTGP5, putativ... 32 8.6
25LOC_Os01g34870:12001.t03044:unspliced-genomic condensin comp... 32 8.6

>LOC_Os01g15770:12001.t01428:unspliced-genomic expressed protein|
          Length = 2170
 Score =  110 bits (235), Expect(5) = 1e-85
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = +2 / +1

                                                                       
Query: 101 VLSYVVTGLAFWSTAFLVMRALMPKRSYEFCNRAVSTMHAVAAVCMACLSVEDWSCPVCP 280
           ++ +VV+G+AFW TAFL+ R   PKRSY+FCNRAVS  HA AAV +ACLSV DWS P+ P
Sbjct: 244 MVGWVVSGVAFWWTAFLLARGAFPKRSYDFCNRAVSAAHAAAAVSLACLSVADWSRPLSP 423

                      
Query: 281 LNAPSSPRQMK 313
           L A SSP Q++
Sbjct: 424 LAAASSPPQVR 456



 Score = 97.3 bits (206), Expect(5) = 1e-85
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2 / +1

                                                           
Query: 305 QMKSLAVTLSYMIYDAVCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQR 448
           QMK+LAVTLSYM+YDA C +LN DVR+DNTVHHLVSIVGI AGLAY+R
Sbjct: 553 QMKALAVTLSYMVYDAACCYLNDDVRVDNTVHHLVSIVGIAAGLAYRR 696



 Score = 86.8 bits (183), Expect(5) = 1e-85
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +2 / +1

                                                     
Query: 446 RCGTEMMACMFITEISSPLLHLREMLKELGIKDTDLNLLVDI 571
           +CGTEM+A +F+TEISSPLLHLRE+LKE GIKDTDLNLLVD+
Sbjct: 784 QCGTEMVASLFVTEISSPLLHLREILKEFGIKDTDLNLLVDV 909



 Score = 57.4 bits (119), Expect(5) = 1e-85
 Identities = 26/36 (72%), Positives = 27/36 (75%)
 Frame = +2 / +1

                                                
Query: 557  LLVDILFAATFSVGRMVGGPYLTYVTLTTDYPILIK 664
            L V ILFA  FSV RM  GPYLTYVT+T D PILIK
Sbjct: 1540 LHVQILFAVIFSVARMGFGPYLTYVTVTADNPILIK 1647



 Score = 53.8 bits (111), Expect(5) = 1e-85
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +2 / +3

                                    
Query: 662  KAMAAGLQLVSAYWFLRILRMVRY 733
            KAMA GLQLVSAYWFLRILRMVR+
Sbjct: 1836 KAMATGLQLVSAYWFLRILRMVRH 1907



 Score = 92.3 bits (195), Expect(5) = 2e-68
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = -3 / -3

                                                                       
Query: 306 WRGEEGALRGQTGQDQSSTERQAMQTAATACMVETARLQNS*ERFGISARITRNAVDQKA 127
           W GEE A RG+ G+DQS+TERQA +TAA A   ETARLQ S*ER G + R +RNAV Q A
Sbjct: 449 WGGEEAAARGERGRDQSATERQARETAAAAWAAETARLQKS*ERLGKAPRASRNAVHQNA 270

                
Query: 126 SPVTT 112
           +P TT
Sbjct: 269 TPDTT 255



 Score = 75.3 bits (158), Expect(5) = 2e-68
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -2 / -2

                                                    
Query: 571 NVDEEVEVRVLDAELLEHLPEVQQRAGDLRDEHARHHLRAA 449
           ++DEEVEV VLDAELLE+L E+QQRAGDLRDE A HHLR A
Sbjct: 909 HIDEEVEVGVLDAELLENLAEMQQRAGDLRDEQAGHHLRPA 787



 Score = 74.8 bits (157), Expect(5) = 2e-68
 Identities = 35/47 (74%), Positives = 36/47 (76%)
 Frame = -3 / -3

                                                          
Query: 447 LW*ARPAPMPTMLTRWCTVLSSRTSPLRWLHTAS*IMYDSVTARDFI 307
           L *ARPA MPTMLTRWCTVLS+ TS LR  H AS  MYDSVTA  FI
Sbjct: 695 LR*ARPAAMPTMLTRWCTVLSTLTSSLR*QHAASYTMYDSVTASAFI 555



 Score = 57.0 bits (118), Expect(5) = 2e-68
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -2 / -3

                                           
Query: 745  LPELVPDHPEDPQEPVGAYQLQTRSHRLDED 653
            LP+LVPDHP DPQEPVG +QLQ   HRL E+
Sbjct: 1919 LPQLVPDHP*DPQEPVGTHQLQACRHRLVEE 1827



 Score = 47.8 bits (98), Expect(5) = 2e-68
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -3 / -3

                                              
Query: 663  LMRMG*SVVKVT*VRYGPPTIRPTEKVAANRMST 562
            LMRMG S V VT VRYGP  IR TE + AN++ T
Sbjct: 1646 LMRMGLSAVTVTYVRYGPKPIRATENITANKICT 1545



 Score = 60.6 bits (126), Expect(5) = 7e-34
 Identities = 28/54 (51%), Positives = 30/54 (55%)
 Frame = -2 / -2

                                                                 
Query: 262 PVLHGEAGHADGSDGVHGGDGAVAELVGALXXXXXXXXXXXXPKGQPGHHVAQH 101
           PV  GEAG  DG  GV GGDGAVAE+VGAL            P+  PGHH   H
Sbjct: 405 PVGDGEAGEGDGGGGVGGGDGAVAEVVGALGEGAARQQERRPPERHPGHHPPHH 244



 Score = 55.6 bits (115), Expect(5) = 7e-34
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -3 / -1

                                         
Query: 741  PSLYLTILRILKNQ*ALTSCKPAAIALMR 655
            PSL LTILRIL+NQ*ALTSCKP AIAL++
Sbjct: 1915 PSLCLTILRILRNQ*ALTSCKPVAIALLK 1829



 Score = 48.3 bits (99), Expect(5) = 7e-34
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = -2 / -2

                                     
Query: 382 PDVTVEMAAHGVVDHVRQRHRQGLHL 305
           PDV VE+AA  VV HVRQRHRQ LHL
Sbjct: 630 PDVVVEVAARRVVHHVRQRHRQRLHL 553



 Score = 39.6 bits (80), Expect(5) = 7e-34
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2 / -2

                                                  
Query: 664  LDEDGVVCCQGDVGEVRSTNHPSHRKGRRK*NVDEEVE 551
            L+EDGVVC  GDV EV    H  HR+   +*N+  + E
Sbjct: 1647 LNEDGVVCRNGDVREVWPKTHSCHREYHGE*NLHMQSE 1534



 Score = 24.9 bits (48), Expect(5) = 7e-34
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -3 / -3

                          
Query: 492 EISVMNMHAIISVPH 448
           EISV N  A ISVPH
Sbjct: 830 EISVTNRLATISVPH 786



 Score = 51.5 bits (106), Expect(5) = 3e-19
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +1 / +3

                                        
Query: 583  DLFGGTDGWWTVPHLRHLDNRLPHPHQG 666
            D+ GGT+G+W +PH+RH   R PHPH G
Sbjct: 1566 DILGGTNGFWAIPHVRHRYGRQPHPH*G 1649



 Score = 38.2 bits (77), Expect(5) = 3e-19
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +1 / +3

                                       
Query: 115 GDRAGLLVDGVPGDAGADAEALLRVLQP 198
           G R G+LVDGVP  A    +ALLR+LQP
Sbjct: 258 GVRGGVLVDGVPAGARRLPQALLRLLQP 341



 Score = 33.1 bits (66), Expect(5) = 3e-19
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1 / +3

                       
Query: 532 RHQGHGPQPPRR 567
           RHQGH PQPPRR
Sbjct: 870 RHQGHRPQPPRR 905



 Score = 30.4 bits (60), Expect(5) = 3e-19
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1 / +2

                                 
Query: 661  QGDGCGFATGKRLLVLEDPQD 723
            QGDG   A G+ LLV EDP+D
Sbjct: 1835 QGDGDRLAAGECLLVPEDPKD 1897



 Score = 24.9 bits (48), Expect(5) = 3e-19
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1 / +3

                        
Query: 301 APDEVPGGDAVVH 339
           A DE  GGDAVVH
Sbjct: 549 AADEGAGGDAVVH 587



 Score = 36.8 bits (74), Expect = 0.26
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = -1 / -1

                                            
Query: 665  P**GWGSLLSR*RR*GTVHQPSVPPKRSPQIE 570
            P**GWG L  R*R *G    P VPP+ S +I+
Sbjct: 1648 P**GWGCLP*R*RT*GMAQNPFVPPRISRRIK 1553



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>LOC_Os08g43190:12008.t04044:unspliced-genomic sorbitol dehydrogenase, putative, expressed|
          Length = 2551

 Score = 37.3 bits (75), Expect = 0.19
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -2 / -3

                                                 
Query: 736  LVPDHPEDPQEPVGAYQLQTRSHRLDEDGVVCCQGDV 626
            LV  HP++   P  A +LQ R HRL E G V    DV
Sbjct: 1919 LVVPHPDEAHLPAAARRLQRRRHRLAEPGAVQAHVDV 1809



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>LOC_Os12g35060:12012.t03194:unspliced-genomic expressed protein|
          Length = 6909

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2 / -1

                                                                    
Query: 709  QEPVGAYQLQTRSHRLDEDGVVCCQGDVGEVRSTNHPSHRKGRRK*NVDEEVEVRV 542
            +E    + L+  +H L +  +V     V  V S  HP HR G  + N D+ V+ R+
Sbjct: 1995 EEITAIHGLEEDTHHLHQVNLVHVHQKVACVGSVQHPYHRSGHLQKNRDKYVQSRI 1828



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>LOC_Os07g36700:12007.t03339:unspliced-genomic CSLF1 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase|
          Length = 2674

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2 / -1

                                
Query: 127  QPGHHVAQHEVLHRFDTSPP 68
            +PGHHV + +V+H  D SPP
Sbjct: 1753 EPGHHVLRRDVVHPPDVSPP 1694



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>LOC_Os07g36690:12007.t03338:unspliced-genomic CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan|
            synthase, expressed
          Length = 3096

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2 / -1

                                
Query: 127  QPGHHVAQHEVLHRFDTSPP 68
            +PGHHV + +V+H  D SPP
Sbjct: 1923 EPGHHVLRRDVVHPPDVSPP 1864



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>LOC_Os06g05440:12006.t00432:unspliced-genomic expressed protein|
          Length = 892

 Score = 33.6 bits (67), Expect = 2.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1 / -3

                                             
Query: 73  GTYRNDGGLRAELRGDRAGLLVDGVPGDAGADAE 174
           G     GG+RAE  GDR  +    V G+AG D E
Sbjct: 398 GEEEEQGGVRAEDEGDRGCVPPGAVDGEAGVDGE 297



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>LOC_Os09g26340:12009.t02313:unspliced-genomic histone H4, putative, expressed|
          Length = 1022

 Score = 29.9 bits (59), Expect(2) = 2.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2 / -1

                                     
Query: 256 LHGEAGHADGSDGVHGGDGAVAELVG 179
           + G A   +G D VHGGDG  A ++G
Sbjct: 353 VEGAALALEGVDDVHGGDGLAAGVLG 276



 Score = 24.0 bits (46), Expect(2) = 2.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3 / -2

                            
Query: 69 PARRPDLDDIDRGTIDWR 16
          P  RPD+DD   G   WR
Sbjct: 76 PLPRPDIDDDGIGDFWWR 23



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>LOC_Os05g06940:12005.t00584:unspliced-genomic relA-SpoT like protein RSH4, putative, expressed|
          Length = 2103

 Score = 26.3 bits (51), Expect(2) = 3.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2 / +3

                             
Query: 250  GEAGHADGSDGVHGGDG 200
            GE   ADG  G H GDG
Sbjct: 1176 GEEEAADGDPGAHQGDG 1226



 Score = 24.0 bits (46), Expect(2) = 3.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3 / +3

                           
Query: 303  RGEEGALRGQTGQDQ 259
            RG++G + G+ G+DQ
Sbjct: 1053 RGDQGHVEGRAGEDQ 1097



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>LOC_Os06g38930:12006.t03591:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,|
            expressed
          Length = 3507

 Score = 32.7 bits (65), Expect = 4.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2 / -3

                                        
Query: 314  SLAVTLSYMIYDAVCSHLNGDVRLDNTV 397
            S++V L Y++   VCSHLN  V+ ++ V
Sbjct: 1036 SMSVALEYVLSSLVCSHLNNSVKGEDKV 953



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>LOC_Os02g44230:12002.t04015:unspliced-genomic expressed protein|
          Length = 4031

 Score = 32.7 bits (65), Expect = 4.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3 / +3

                                                 
Query: 405  RWCTVLSSRTSPLRWLHTAS*IMYDSVTARDFIWRGE 295
            RWC    +R SP +W      I+  S  A   IWRG+
Sbjct: 1755 RWCQ*AQNRGSPCQWTA*CHEILVTSQEAECSIWRGQ 1865



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>LOC_Os02g32460:12002.t02889:unspliced-genomic molybdenum cofactor synthesis protein 3, putative, expressed|
          Length = 4628

 Score = 32.7 bits (65), Expect = 4.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3 / +2

                                         
Query: 1041 IFFFFFCTRMKLNCYSVYVYASFVEKMLV 955
            +F FFFCT+ K+N  S  ++  F+ +  +
Sbjct: 3293 LFLFFFCTKYKVNSVSFTLFMKFITETYI 3379



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>LOC_Os02g04840:12002.t00382:unspliced-genomic ARA1, putative, expressed|
          Length = 8874

 Score = 32.7 bits (65), Expect = 4.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2 / +2

                                     
Query: 473 MFITEISSPLLHLREMLKELGIKDTD 550
           +F TEISSP LH+R++L + G    D
Sbjct: 761 VFTTEISSPNLHIRKVLLDCGAVQAD 838



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>LOC_Os11g47760:12011.t04270:unspliced-genomic heat shock cognate 70 kDa protein 2, putative, expressed|
          Length = 4303

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -2 / +1

                            
Query: 508  VQQRAGDLRDEHARHH 461
            VQ+RAG+LR +HA+HH
Sbjct: 3622 VQERAGELRLQHAQHH 3669



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>LOC_Os06g36500:12006.t03346:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 6083

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3 / -2

                                              
Query: 921  IIHVAYLLLFH*QASFQQRMHIHIRCSNSISFLC 1022
            ++H+ +    +  AS  QR H+H  CS  ++++C
Sbjct: 1603 LLHIFWFSCLYPVASNTQRYHVHFSCSVCMTYIC 1502



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>LOC_Os05g21230:12005.t01884:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2395

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -2 / -2

                                         
Query: 865  RSISSRQKASNLLKVACKICIYMDRSLCI 779
            RSIS  Q+AS+   VAC I I++D  LC+
Sbjct: 1125 RSISIGQRASSK*GVACHI*IFLDLMLCL 1039



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>LOC_Os04g32140:12004.t02893:unspliced-genomic microneme protein Sm70, putative|
          Length = 1116

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2 / -3

                                          
Query: 215 HAVAAVCMACLSVEDWSCPVCPLNAPSSPRQ 307
           H  AA C  C +   W   +CP++APS  R+
Sbjct: 985 HRQAAQCHPCAAPPSWRRCLCPVSAPSCGRR 893



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>LOC_Os01g71220:12001.t06418:unspliced-genomic RING zinc finger protein, putative, expressed|
          Length = 4866

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2 / +3

                                                   
Query: 617  YLTYVTLTTDYPILIKAMAAGLQLVSAYWFLRILRMVRY 733
            Y++++T  +D  ILI+ +   LQLV + W   I  +V Y
Sbjct: 1695 YISFITSQSDV*ILIQVVVNSLQLVGSNWTNVIFSIVPY 1811



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>LOC_Os01g52970:12001.t04723:unspliced-genomic ribosomal RNA apurinic site specific lyase, putative, expressed|
          Length = 1785

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2 / -1

                                
Query: 241 GHADGSDGVHGGDGAVAELVG 179
           G   G DGVHGGD   AE VG
Sbjct: 297 GGVRGEDGVHGGDDVAAEGVG 235



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>LOC_Os11g26840:12011.t02298:unspliced-genomic hypothetical protein|
          Length = 737

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3 / -1

                                             
Query: 153 TRNAVDQKASPVTT*LSTKSSIVSIRPHPARRPD 52
           T + +  +  P +   S  SS  S RPHPAR PD
Sbjct: 332 TSSCIRHRPPPPSRAPSPASSATSRRPHPARHPD 231



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>LOC_Os10g37850:12010.t03043:unspliced-genomic armadillo-repeat containing protein, putative, expressed|
          Length = 2402

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1 / +2

                                                     
Query: 73  GTYRNDGGLRAELRGDRAGLLVDGVPGDAGADAEALLRVLQP 198
           G     GG     RGDR    V+G  G+AG  A   +R +QP
Sbjct: 533 GAVAGAGGAGRGARGDRLRRPVEGYRGEAGEGAAVPVRPVQP 658



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>LOC_Os07g03690:12007.t00258:unspliced-genomic pathogenesis-related protein PRB1-2 precursor, putative|
          Length = 519

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +1 / +3

                                      
Query: 73  GTYRNDGGLRAELRGDRAGLLVDGVPG 153
           G  R+ GG+RAELRG  AG L  G  G
Sbjct: 153 GVERHGGGVRAELRGAAAGRLQAGPLG 233



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>LOC_Os07g02674:12007.t00158:unspliced-genomic expressed protein|
          Length = 5982

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -3 / +3

                                                   
Query: 1041 IFFFFFCTRMKLNCYSVYVYASFVEKMLVNGTTVDMLHE 925
            +FFF     ++LN Y+ +VYA  ++ + VN   +++ ++
Sbjct: 3399 LFFF*KKCHIELNDYNTFVYAKLIKSLQVNSDEIEIANK 3515



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>LOC_Os06g30110:12006.t02715:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5338

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3 / +1

                                                          
Query: 324  TARDFIWRGEEGALRGQTGQDQSSTERQAMQTAATACMVETARLQN 187
            T R   W G    L  +TGQD     RQ ++ AA++     A++++
Sbjct: 1240 TRRGAAWCGARARLMRRTGQDSGRAARQRLEGAASSVQTG*AQIEH 1377



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>LOC_Os06g12020:12006.t01079:unspliced-genomic NTGP5, putative, expressed|
          Length = 3996

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2 / -3

                                               
Query: 215 HAVAAVCMACLSVEDWSCPVCPLNAPSSPRQMKSLA 322
           H      ++ ++V  WSC + P++ PSS R + S A
Sbjct: 409 HRARTNSLSAVTVVAWSCMLGPMSEPSSSRNLTSTA 302



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>LOC_Os01g34870:12001.t03044:unspliced-genomic condensin complex subunit 2, putative, expressed|
          Length = 4511

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3 / -3

                                      
Query: 306  WRGEEGALRGQTGQDQSSTERQAMQT 229
            W+GEEGA RG+ G+ +   ER+   T
Sbjct: 1422 WKGEEGAGRGRRGRKRRGEERKESLT 1345


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 341,119,195
Number of extensions: 5143472
Number of successful extensions: 24943
Number of sequences better than 10.0: 25
Length of query: 347
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 297
Effective length of database: 52,799,986
Effective search space: 15681595842
Effective search space used: 15681595842
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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