>LOC_Os01g15770:12001.t01428:unspliced-genomic expressed protein|
Length = 2170
Score = 110 bits (235), Expect(5) = 1e-85
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2 / +1
Query: 101 VLSYVVTGLAFWSTAFLVMRALMPKRSYEFCNRAVSTMHAVAAVCMACLSVEDWSCPVCP 280
++ +VV+G+AFW TAFL+ R PKRSY+FCNRAVS HA AAV +ACLSV DWS P+ P
Sbjct: 244 MVGWVVSGVAFWWTAFLLARGAFPKRSYDFCNRAVSAAHAAAAVSLACLSVADWSRPLSP 423
Query: 281 LNAPSSPRQMK 313
L A SSP Q++
Sbjct: 424 LAAASSPPQVR 456
Score = 97.3 bits (206), Expect(5) = 1e-85
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +2 / +1
Query: 305 QMKSLAVTLSYMIYDAVCSHLNGDVRLDNTVHHLVSIVGIGAGLAYQR 448
QMK+LAVTLSYM+YDA C +LN DVR+DNTVHHLVSIVGI AGLAY+R
Sbjct: 553 QMKALAVTLSYMVYDAACCYLNDDVRVDNTVHHLVSIVGIAAGLAYRR 696
Score = 86.8 bits (183), Expect(5) = 1e-85
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +2 / +1
Query: 446 RCGTEMMACMFITEISSPLLHLREMLKELGIKDTDLNLLVDI 571
+CGTEM+A +F+TEISSPLLHLRE+LKE GIKDTDLNLLVD+
Sbjct: 784 QCGTEMVASLFVTEISSPLLHLREILKEFGIKDTDLNLLVDV 909
Score = 57.4 bits (119), Expect(5) = 1e-85
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = +2 / +1
Query: 557 LLVDILFAATFSVGRMVGGPYLTYVTLTTDYPILIK 664
L V ILFA FSV RM GPYLTYVT+T D PILIK
Sbjct: 1540 LHVQILFAVIFSVARMGFGPYLTYVTVTADNPILIK 1647
Score = 53.8 bits (111), Expect(5) = 1e-85
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2 / +3
Query: 662 KAMAAGLQLVSAYWFLRILRMVRY 733
KAMA GLQLVSAYWFLRILRMVR+
Sbjct: 1836 KAMATGLQLVSAYWFLRILRMVRH 1907
Score = 92.3 bits (195), Expect(5) = 2e-68
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = -3 / -3
Query: 306 WRGEEGALRGQTGQDQSSTERQAMQTAATACMVETARLQNS*ERFGISARITRNAVDQKA 127
W GEE A RG+ G+DQS+TERQA +TAA A ETARLQ S*ER G + R +RNAV Q A
Sbjct: 449 WGGEEAAARGERGRDQSATERQARETAAAAWAAETARLQKS*ERLGKAPRASRNAVHQNA 270
Query: 126 SPVTT 112
+P TT
Sbjct: 269 TPDTT 255
Score = 75.3 bits (158), Expect(5) = 2e-68
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2 / -2
Query: 571 NVDEEVEVRVLDAELLEHLPEVQQRAGDLRDEHARHHLRAA 449
++DEEVEV VLDAELLE+L E+QQRAGDLRDE A HHLR A
Sbjct: 909 HIDEEVEVGVLDAELLENLAEMQQRAGDLRDEQAGHHLRPA 787
Score = 74.8 bits (157), Expect(5) = 2e-68
Identities = 35/47 (74%), Positives = 36/47 (76%)
Frame = -3 / -3
Query: 447 LW*ARPAPMPTMLTRWCTVLSSRTSPLRWLHTAS*IMYDSVTARDFI 307
L *ARPA MPTMLTRWCTVLS+ TS LR H AS MYDSVTA FI
Sbjct: 695 LR*ARPAAMPTMLTRWCTVLSTLTSSLR*QHAASYTMYDSVTASAFI 555
Score = 57.0 bits (118), Expect(5) = 2e-68
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2 / -3
Query: 745 LPELVPDHPEDPQEPVGAYQLQTRSHRLDED 653
LP+LVPDHP DPQEPVG +QLQ HRL E+
Sbjct: 1919 LPQLVPDHP*DPQEPVGTHQLQACRHRLVEE 1827
Score = 47.8 bits (98), Expect(5) = 2e-68
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 663 LMRMG*SVVKVT*VRYGPPTIRPTEKVAANRMST 562
LMRMG S V VT VRYGP IR TE + AN++ T
Sbjct: 1646 LMRMGLSAVTVTYVRYGPKPIRATENITANKICT 1545
Score = 60.6 bits (126), Expect(5) = 7e-34
Identities = 28/54 (51%), Positives = 30/54 (55%)
Frame = -2 / -2
Query: 262 PVLHGEAGHADGSDGVHGGDGAVAELVGALXXXXXXXXXXXXPKGQPGHHVAQH 101
PV GEAG DG GV GGDGAVAE+VGAL P+ PGHH H
Sbjct: 405 PVGDGEAGEGDGGGGVGGGDGAVAEVVGALGEGAARQQERRPPERHPGHHPPHH 244
Score = 55.6 bits (115), Expect(5) = 7e-34
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -3 / -1
Query: 741 PSLYLTILRILKNQ*ALTSCKPAAIALMR 655
PSL LTILRIL+NQ*ALTSCKP AIAL++
Sbjct: 1915 PSLCLTILRILRNQ*ALTSCKPVAIALLK 1829
Score = 48.3 bits (99), Expect(5) = 7e-34
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 382 PDVTVEMAAHGVVDHVRQRHRQGLHL 305
PDV VE+AA VV HVRQRHRQ LHL
Sbjct: 630 PDVVVEVAARRVVHHVRQRHRQRLHL 553
Score = 39.6 bits (80), Expect(5) = 7e-34
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 664 LDEDGVVCCQGDVGEVRSTNHPSHRKGRRK*NVDEEVE 551
L+EDGVVC GDV EV H HR+ +*N+ + E
Sbjct: 1647 LNEDGVVCRNGDVREVWPKTHSCHREYHGE*NLHMQSE 1534
Score = 24.9 bits (48), Expect(5) = 7e-34
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 492 EISVMNMHAIISVPH 448
EISV N A ISVPH
Sbjct: 830 EISVTNRLATISVPH 786
Score = 51.5 bits (106), Expect(5) = 3e-19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1 / +3
Query: 583 DLFGGTDGWWTVPHLRHLDNRLPHPHQG 666
D+ GGT+G+W +PH+RH R PHPH G
Sbjct: 1566 DILGGTNGFWAIPHVRHRYGRQPHPH*G 1649
Score = 38.2 bits (77), Expect(5) = 3e-19
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 115 GDRAGLLVDGVPGDAGADAEALLRVLQP 198
G R G+LVDGVP A +ALLR+LQP
Sbjct: 258 GVRGGVLVDGVPAGARRLPQALLRLLQP 341
Score = 33.1 bits (66), Expect(5) = 3e-19
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 532 RHQGHGPQPPRR 567
RHQGH PQPPRR
Sbjct: 870 RHQGHRPQPPRR 905
Score = 30.4 bits (60), Expect(5) = 3e-19
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 661 QGDGCGFATGKRLLVLEDPQD 723
QGDG A G+ LLV EDP+D
Sbjct: 1835 QGDGDRLAAGECLLVPEDPKD 1897
Score = 24.9 bits (48), Expect(5) = 3e-19
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 301 APDEVPGGDAVVH 339
A DE GGDAVVH
Sbjct: 549 AADEGAGGDAVVH 587
Score = 36.8 bits (74), Expect = 0.26
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -1 / -1
Query: 665 P**GWGSLLSR*RR*GTVHQPSVPPKRSPQIE 570
P**GWG L R*R *G P VPP+ S +I+
Sbjct: 1648 P**GWGCLP*R*RT*GMAQNPFVPPRISRRIK 1553
>LOC_Os09g26340:12009.t02313:unspliced-genomic histone H4, putative, expressed|
Length = 1022
Score = 29.9 bits (59), Expect(2) = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2 / -1
Query: 256 LHGEAGHADGSDGVHGGDGAVAELVG 179
+ G A +G D VHGGDG A ++G
Sbjct: 353 VEGAALALEGVDDVHGGDGLAAGVLG 276
Score = 24.0 bits (46), Expect(2) = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / -2
Query: 69 PARRPDLDDIDRGTIDWR 16
P RPD+DD G WR
Sbjct: 76 PLPRPDIDDDGIGDFWWR 23
>LOC_Os05g06940:12005.t00584:unspliced-genomic relA-SpoT like protein RSH4, putative, expressed|
Length = 2103
Score = 26.3 bits (51), Expect(2) = 3.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2 / +3
Query: 250 GEAGHADGSDGVHGGDG 200
GE ADG G H GDG
Sbjct: 1176 GEEEAADGDPGAHQGDG 1226
Score = 24.0 bits (46), Expect(2) = 3.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 303 RGEEGALRGQTGQDQ 259
RG++G + G+ G+DQ
Sbjct: 1053 RGDQGHVEGRAGEDQ 1097
>LOC_Os01g34870:12001.t03044:unspliced-genomic condensin complex subunit 2, putative, expressed|
Length = 4511
Score = 31.8 bits (63), Expect = 8.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 306 WRGEEGALRGQTGQDQSSTERQAMQT 229
W+GEEGA RG+ G+ + ER+ T
Sbjct: 1422 WKGEEGAGRGRRGRKRRGEERKESLT 1345
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 341,119,195
Number of extensions: 5143472
Number of successful extensions: 24943
Number of sequences better than 10.0: 25
Length of query: 347
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 297
Effective length of database: 52,799,986
Effective search space: 15681595842
Effective search space used: 15681595842
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)