ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf127l23 |
|---|---|
| Clone Library Name | barley_pub |
>P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmodium lophurae| Length = 351 Score = 47.4 bits (111), Expect = 2e-04 Identities = 32/120 (26%), Positives = 39/120 (32%), Gaps = 3/120 (2%) Frame = -1 Query: 840 EEHHPAHPASQR--WEHYPQF*-ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGA 670 EEHH H A+ W H+ H P H P H HHH H H Sbjct: 146 EEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPH 205 Query: 669 HSFSEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCH 490 H + H H G+HH + HG H HH+ G H + H Sbjct: 206 HHHHHHHAPHHHHHHHHGHHHHHHHHHG--------------HHHHHHHHHGHHHHHHHH 251 Score = 46.2 bits (108), Expect = 4e-04 Identities = 32/125 (25%), Positives = 40/125 (32%), Gaps = 6/125 (4%) Frame = -1 Query: 840 EEHHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSH--GLHHHVSSPGHDQSHCGAH 667 EEHH HP H+ + H P H H G HHH H H H Sbjct: 75 EEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHH 134 Query: 666 SFSEAVSQSRHQTHC----CGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYS 499 A H+ H +HH + H +G H HH+ P H + Sbjct: 135 HHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYH----HHHAPHHHHHHHHAPHHHHH- 189 Query: 498 RCHSH 484 H H Sbjct: 190 --HHH 192 Score = 45.8 bits (107), Expect = 5e-04 Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 11/130 (8%) Frame = -1 Query: 840 EEHHPAHPASQRW----EHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCG 673 EEHH HP EH+ E H P + H P H HHH P H H G Sbjct: 59 EEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPH--HHHHHHPPHHHHHLG 116 Query: 672 AHSFSEAVS-----QSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHP--HHNLPG 514 H + + H H +HH + H HP HH+ G Sbjct: 117 HHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHH---------HHHHAAHHHPWFHHHHLG 167 Query: 513 SHSYSRCHSH 484 H + H H Sbjct: 168 YHHHHAPHHH 177 Score = 40.0 bits (92), Expect = 0.028 Identities = 27/115 (23%), Positives = 32/115 (27%) Frame = -1 Query: 834 HHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSE 655 HH H A H+ H P H P H HHH H H H Sbjct: 177 HHHHHHAPHHHHHH------HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHH 230 Query: 654 AVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCH 490 H H G+HH + H H HH+ H + H Sbjct: 231 HHGHHHHHHHHHGHHHHHHHHH-------------DAHHHHHHHHDAHHHHHHHH 272 Score = 38.9 bits (89), Expect = 0.063 Identities = 30/122 (24%), Positives = 36/122 (29%) Frame = -1 Query: 840 EEHHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSF 661 EEHH H A+ H H H W G HHH + H H H Sbjct: 131 EEHHHHHHAAHHHHHEEHH---HHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPH-- 185 Query: 660 SEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCHSHG 481 H H HH + H +P PHH+ H + H H Sbjct: 186 -------HHHHHHHAPHHHHHHHH-------APHHHHHHHHAPHHHHHHHHGHHHHHHHH 231 Query: 480 SG 475 G Sbjct: 232 HG 233 Score = 38.1 bits (87), Expect = 0.11 Identities = 28/122 (22%), Positives = 36/122 (29%), Gaps = 6/122 (4%) Frame = -1 Query: 831 HPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGL------HHHVSSPGHDQSHCGA 670 HP H + H+P E H P + H P H HHH P H H Sbjct: 53 HPEHLHEEHHHHHP---EEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPP 109 Query: 669 HSFSEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCH 490 H + H H +HH + H HH+ H + H Sbjct: 110 HHHHH-LGHHHHHHHAAHHHH-------------------HEEHHHHHHAAHHHHHEEHH 149 Query: 489 SH 484 H Sbjct: 150 HH 151 Score = 34.3 bits (77), Expect = 1.5 Identities = 24/115 (20%), Positives = 30/115 (26%) Frame = -1 Query: 834 HHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSE 655 HH H H H H + H HHH + H H AH Sbjct: 240 HHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH 299 Query: 654 AVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCH 490 + H H HH + H H HH+ H + H Sbjct: 300 HHHDAHHHHHHHDAHHHHHHHH-------------DAHHHHHHHHDAHHHHHHHH 341 Score = 32.0 bits (71), Expect = 7.7 Identities = 25/115 (21%), Positives = 32/115 (27%) Frame = -1 Query: 834 HHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSE 655 HH H H+ H D H H HHH + H H AH Sbjct: 227 HHHHHHGHHHHHHHHHGHHHHHHHHHDAH-------HHHHHHHDAHHHHHHHHDAHHHHH 279 Query: 654 AVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCH 490 + H H +HH H + H HH+ H + H Sbjct: 280 HHHDAHHHHH---HHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHH 331
>O67825:IF2_AQUAE Translation initiation factor IF-2 - Aquifex aeolicus| Length = 805 Score = 40.4 bits (93), Expect = 0.022 Identities = 32/133 (24%), Positives = 55/133 (41%) Frame = +3 Query: 747 DEGLAQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXX 926 DE + +A I++ E EQ AP EE K ++ Sbjct: 46 DEQALEMIYDAFGIKEEEEKEEVVTEQAQAPAEVEEKKEEEK--------------KEEV 91 Query: 927 XYEKIREEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTE 1106 E++ EE++ ++ + EE+K E +K + S ++ EI K +KEKKK E Sbjct: 92 IVEEVVEEKKPEVIVEEIEEKKEEEEKKEEEKPKKSVEELIKEILEKKEKEKEKKKVEKE 151 Query: 1107 RDERAKKSLSINE 1145 R E + + + + Sbjct: 152 RKEEKVRVVEVKK 164 Score = 35.4 bits (80), Expect = 0.69 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = +3 Query: 933 EKIREEQRKALLALKTEERKVEV--DKDLQSLQPLSTKKANDEIFIKL--GSDKEKKKES 1100 EK R+E++ ++ +K EERK E +K + + K EI KL +KEKKK+ Sbjct: 149 EKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKKQE 208 Query: 1101 TERDERAKK 1127 E+ KK Sbjct: 209 KREKEKKKK 217
>Q6AXS5:PAIRB_RAT Plasminogen activator inhibitor 1 RNA-binding protein - Rattus| norvegicus (Rat) Length = 407 Score = 38.9 bits (89), Expect = 0.063 Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 14/190 (7%) Frame = +3 Query: 633 GDDSERPPRRNYERHSGTGRGQ-----GMK----RDGAGRGNWGSSTDEGLAQETDEALK 785 GD + +R ++RHSG+ R G+K R G+G NWG+ DE + Sbjct: 182 GDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQ 241 Query: 786 IEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKAL 965 I N E+ ++ P E + E+++EE K Sbjct: 242 ISYNCSDLEQSNVTEETPEGEEHPVADTENKEN--------------EVEEVKEEGPK-- 285 Query: 966 LALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKK-----ESTERDERAKKS 1130 + +E K +KD ++ + +K N+ G+D + KK +S + A+ S Sbjct: 286 -EMTLDEWKAIQNKDRAKVE-FNIRKPNE------GADGQWKKGFVLHKSKSEEAHAEDS 337 Query: 1131 LSINEFLKPA 1160 + + F KPA Sbjct: 338 VMDHHFRKPA 347
>Q9CY58:PAIRB_MOUSE Plasminogen activator inhibitor 1 RNA-binding protein - Mus musculus| (Mouse) Length = 407 Score = 37.7 bits (86), Expect = 0.14 Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 14/190 (7%) Frame = +3 Query: 633 GDDSERPPRRNYERHSGTGRGQ-----GMK----RDGAGRGNWGSSTDEGLAQETDEALK 785 GD + +R ++RHSG+ R G+K R G+G NWG+ DE + Sbjct: 182 GDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQ 241 Query: 786 IEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKAL 965 I N ++ ++ P E + E+++EE K Sbjct: 242 ISYNCSDLDQSNVTEETPEGEEHPVADTENKEN--------------EVEEVKEEGPK-- 285 Query: 966 LALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKK-----ESTERDERAKKS 1130 + +E K +KD ++ + +K N+ G+D + KK +S + A+ S Sbjct: 286 -EMTLDEWKAIQNKDRAKVE-FNIRKPNE------GADGQWKKGFVLHKSKSEEAHAEDS 337 Query: 1131 LSINEFLKPA 1160 + + F KPA Sbjct: 338 VMDHHFRKPA 347
>P36044:MNN4_YEAST Protein MNN4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1178 Score = 37.4 bits (85), Expect = 0.18 Identities = 27/120 (22%), Positives = 52/120 (43%) Frame = +3 Query: 786 IEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKAL 965 +E+ +K+ E+++ EE K +K+ K +K EE++K Sbjct: 1034 LEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKK- 1092 Query: 966 LALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAKKSLSINE 1145 + EE K + +++ + Q K N++ K D+EKKK E ++ ++ NE Sbjct: 1093 ---QEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNE 1149
>Q8NC51:PAIRB_HUMAN Plasminogen activator inhibitor 1 RNA-binding protein - Homo sapiens| (Human) Length = 408 Score = 37.0 bits (84), Expect = 0.24 Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 14/190 (7%) Frame = +3 Query: 633 GDDSERPPRRNYERHSGTGRGQ-----GMK----RDGAGRGNWGSSTDEGLAQETDEALK 785 GD + +R ++RHSG+ R G+K R G+G NWG+ DE L + K Sbjct: 182 GDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDE-LTESPKYIQK 240 Query: 786 IEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKAL 965 S Q + P EE+ D K E+++EE K Sbjct: 241 QISYNYSDLDQSNVTEETPEGEEHHPVADTENK------------ENEVEEVKEEGPK-- 286 Query: 966 LALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKK-----ESTERDERAKKS 1130 + +E K +KD ++ + +K N+ G+D + KK +S + A+ S Sbjct: 287 -EMTLDEWKAIQNKDRAKVE-FNIRKPNE------GADGQWKKGFVLHKSKSEEAHAEDS 338 Query: 1131 LSINEFLKPA 1160 + + F KPA Sbjct: 339 VMDHHFRKPA 348
>Q14004:CD2L5_HUMAN Cell division cycle 2-like protein kinase 5 - Homo sapiens (Human)| Length = 1512 Score = 36.6 bits (83), Expect = 0.31 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%) Frame = +3 Query: 633 GDDSERPPRRNYERHSGTGRG-----QGMKRDGAGRGNWGSSTDEGLAQETDEALKIEDN 797 G+ SER PRR +R S +GR + +RDG G+ S + + +E ++ + Sbjct: 191 GEGSERRPRR--DRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKS 248 Query: 798 APSAEKQGEQDDAPPTTEENKGQKDGAAK 884 S+ G + A T+ + +KD +K Sbjct: 249 GSSSSSGGRRKSASATSSSSSSRKDRDSK 277
>Q62598:DSPP_RAT Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein - Rattus norvegicus (Rat) Length = 687 Score = 36.2 bits (82), Expect = 0.41 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Frame = +3 Query: 669 ERHSGT----GRGQGMKRDGAGRGNWGSSTDEGLAQETDEALKIEDNAPSAEKQG-EQDD 833 E H GT G+ G D G+G+ + D+ QE + DN S+E+ G E+ D Sbjct: 266 ESHDGTEGHEGQSSGGNNDNRGQGSVSTEDDDSKEQEGSPNGRGGDNTSSSEETGIEEGD 325 Query: 834 APPTTEENK 860 TT++N+ Sbjct: 326 GTQTTQDNQ 334
>P26377:STP2_BOVIN Nuclear transition protein 2 - Bos taurus (Bovine)| Length = 132 Score = 35.8 bits (81), Expect = 0.53 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 11/116 (9%) Frame = -1 Query: 756 DLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSEAVSQSRHQTHCCGNHHVYLRLHG--- 586 D +P++H H S P QSH H QSR ++ C + R Sbjct: 2 DTKTQSLPNTHAQPHSNSRP---QSHACHHCSCSQHCQSRSRSRSCRSRSSSRRPRSHRS 58 Query: 585 -MGVEGLSPRPRLQLQRHPH----HNLPGSHSYSRCHSHGSGR---TGRLLCRGQV 442 G +G SP P L+RH H H P C SH R G+++ R QV Sbjct: 59 PTGRQGQSPGPSPPLRRHRHTMHSHQCPSRPVTHSC-SHSKNRKNLEGKVIKRKQV 113
>Q09437:YP62_CAEEL Putative serine/threonine-protein kinase B0495.2 - Caenorhabditis| elegans Length = 719 Score = 35.0 bits (79), Expect = 0.91 Identities = 29/128 (22%), Positives = 51/128 (39%) Frame = +3 Query: 735 GSSTDEGLAQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXX 914 GSS DEG ++ D + ++ D P + NKG + Sbjct: 6 GSSHDEG---------ELSDESHKKSQRASSSDEPNPAKSNKGLES-------------- 42 Query: 915 XXXXXYEKIREEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKK 1094 K+RE L K E + + S+QP + +KA ++ + +++KK+ Sbjct: 43 -------KMRESILSRLSKRKNSESDDDTTEQRFSIQPKNAQKAKEDRY--RDKERDKKR 93 Query: 1095 ESTERDER 1118 E +RD+R Sbjct: 94 EKDKRDDR 101
>P08116:PVA_PLAFA Processed variable antigen - Plasmodium falciparum| Length = 224 Score = 35.0 bits (79), Expect = 0.91 Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 2/159 (1%) Frame = +3 Query: 672 RHSGTGRGQGMKRDGAGRGNWGSSTDEGLAQETDEALKIEDNAPSAEKQ--GEQDDAPPT 845 + +G + G ++ G S + G ++ET E+ + ++ + E + GE + + Sbjct: 24 KETGESKETGESKETGESKETGESKETGESKETGESKETGESKETGESKETGESKETGES 83 Query: 846 TEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKALLALKTEERKVEVDKDLQSLQ 1025 E + ++ G +K Y KI E R+ TEE K D++ + Sbjct: 84 KETGESKETGESKETGESKETRIYEETKYNKITSEFRETENVKITEESK---DREGNKVS 140 Query: 1026 PLSTKKANDEIFIKLGSDKEKKKESTERDERAKKSLSIN 1142 N + S+ E+ K+ E++E + L N Sbjct: 141 GPYENSENSNV----TSESEETKKLAEKEENEGEKLGEN 175
>P12839:NFM_RAT Neurofilament medium polypeptide - Rattus norvegicus (Rat)| Length = 846 Score = 35.0 bits (79), Expect = 0.91 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%) Frame = +3 Query: 747 DEGLAQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXX 926 DEG+ + E E S + +GEQ++ T E +G++ A Sbjct: 532 DEGVKSDQAEEGGSEKEGSSEKDEGEQEEEGETEAEGEGEEAEAK--------------- 576 Query: 927 XYEKIREEQRKALLALKTEERKVEVDKDLQSLQPLS-TKKANDEIFIKLGSDKEKKKEST 1103 E+ + E + +A+K EE KVE + +S P S ++ + K G D++K++E Sbjct: 577 --EEKKTEGKVEEMAIK-EEIKVEKPEKAKSPVPKSPVEEVKPKPEAKAGKDEQKEEEKV 633 Query: 1104 -ERDERAKKS 1130 E+ E AK+S Sbjct: 634 EEKKEVAKES 643
>Q5F2E7:NUFP2_MOUSE Nuclear fragile X mental retardation-interacting protein 2 - Mus| musculus (Mouse) Length = 692 Score = 35.0 bits (79), Expect = 0.91 Identities = 20/66 (30%), Positives = 25/66 (37%) Frame = -1 Query: 732 SSHGLHHHVSSPGHDQSHCGAHSFSEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPR 553 S H HHH QSH H + S + H H H YL+ G P+P Sbjct: 15 SHHHPHHHPQQQQQQQSHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPL 74 Query: 552 LQLQRH 535 Q+H Sbjct: 75 KHEQKH 80
>Q5HWW3:SYT_CAMJR Threonyl-tRNA synthetase - Campylobacter jejuni (strain RM1221)| Length = 602 Score = 34.7 bits (78), Expect = 1.2 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +3 Query: 945 EEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAK 1124 +E +K LL L + E ++ L ++ K+ I + LG D+ K+ RD RAK Sbjct: 521 KEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILV-LGDDEVAKRSVALRDRRAK 579 Query: 1125 --KSLSINEFLK 1154 K+LS++EF+K Sbjct: 580 EQKNLSLDEFIK 591
>Q9PIS3:SYT_CAMJE Threonyl-tRNA synthetase - Campylobacter jejuni| Length = 602 Score = 34.7 bits (78), Expect = 1.2 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +3 Query: 945 EEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAK 1124 +E +K LL L + E ++ L ++ K+ I + LG D+ K+ RD RAK Sbjct: 521 KEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILV-LGDDEVAKRSVALRDRRAK 579 Query: 1125 --KSLSINEFLK 1154 K+LS++EF+K Sbjct: 580 EQKNLSLDEFIK 591
>A1A5I1:F133_DANRE Protein FAM133 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 259 Score = 34.7 bits (78), Expect = 1.2 Identities = 30/166 (18%), Positives = 64/166 (38%) Frame = +3 Query: 639 DSERPPRRNYERHSGTGRGQGMKRDGAGRGNWGSSTDEGLAQETDEALKIEDNAPSAEKQ 818 + ++ ++ RHS + D + + + D+ ++ + K + S K Sbjct: 101 EKKKKEKKKSSRHSSSSSSSSSSSDSSSSSSLDAEDDD---EKKNLKKKKKRKRSSTRKA 157 Query: 819 GEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKALLALKTEERKVE 998 ++ D+ T+ + K K EK ++RKA + + + Sbjct: 158 SDETDSESETDSRESFKKKRKKTDGEKDKD--------EKDSRKKRKAERSQSESSDESD 209 Query: 999 VDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAKKSLS 1136 VDKD S + + + ++I K K+KKK ++ +K+ S Sbjct: 210 VDKDADSKKKKHSSEEKEKITDKSKKKKKKKKHKKHSKKKKRKTSS 255
>P09085:CAD_DROME Homeotic protein caudal - Drosophila melanogaster (Fruit fly)| Length = 427 Score = 34.7 bits (78), Expect = 1.2 Identities = 29/120 (24%), Positives = 45/120 (37%) Frame = -1 Query: 825 AHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSEAVS 646 A A Q W P + H P + SSH HH ++ H + H F A + Sbjct: 23 ASAAGQPWNWTPNY---HHTPPNHQFLGDVDSSHAAHH--AAAAHQMYYNSHHMFHSAAA 77 Query: 645 QSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCHSHGSGRTG 466 S + H + V+ + +Q+H HH+ +H+ S S GS +G Sbjct: 78 ASAGEWHSPASSTA-----DNFVQNVPTSAHQLMQQHHHHH---AHASSSSASSGSSSSG 129
>Q17851:YAVK_CAEEL Uncharacterized protein C09B9.3 - Caenorhabditis elegans| Length = 884 Score = 34.3 bits (77), Expect = 1.5 Identities = 24/83 (28%), Positives = 39/83 (46%) Frame = +3 Query: 759 AQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEK 938 AQE E +K+ED S EK E D +++ G+++ K Y + Sbjct: 454 AQEKKEIIKLEDRTDSVEK--ESDKNTKNKKKSSGEQNKTVKSGAENMKILKPDAVKYVE 511 Query: 939 IREEQRKALLALKTEERKVEVDK 1007 ++E K L A K EE ++E++K Sbjct: 512 KQKELEK-LNAAKKEEERMELEK 533
>Q55709:SECA_SYNY3 Preprotein translocase subunit secA - Synechocystis sp. (strain PCC| 6803) Length = 932 Score = 34.3 bits (77), Expect = 1.5 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 10/136 (7%) Frame = +3 Query: 681 GTGRGQGMKRDGAGRGNWGSSTDEGLAQETDEALKIEDN----------APSAEKQGEQD 830 GT R + + D RG G D G T L +EDN A ++ Sbjct: 651 GTERHESRRVDNQLRGRAGRQGDPG---STRFFLSLEDNLLRIFGGDRVAGLMNMFRVEE 707 Query: 831 DAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKALLALKTEERKVEVDKD 1010 D P ++ G +GA K Y+++ QRKA+ A E R+V D Sbjct: 708 DMPIESKMLTGSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAIYA---ERRRVLEGLD 764 Query: 1011 LQSLQPLSTKKANDEI 1058 L+ + +K DEI Sbjct: 765 LKEQVLVYAEKTMDEI 780
>Q8N5F7:NKAP_HUMAN NF-kappa-B-activating protein - Homo sapiens (Human)| Length = 415 Score = 34.3 bits (77), Expect = 1.5 Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 4/171 (2%) Frame = +3 Query: 630 FGDDSERPPRRNYERHSGTGRGQGMKRDGAGRGN----WGSSTDEGLAQETDEALKIEDN 797 +G D P + ER + + +R+ G WG S + ++DE +ED Sbjct: 108 YGSDKPWPSLLDKEREESLRQKRLSERERIGELGAPEVWGLSP-KNPEPDSDEHTPVEDE 166 Query: 798 APSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKALLALK 977 P + + T+EE K +K +K R ++R+ + K Sbjct: 167 EPK-----KSTTSASTSEEEKKKKSSRSKE------------------RSKKRRKKKSSK 203 Query: 978 TEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAKKS 1130 + +K D D S + +++ K KEKKK+ + + K+S Sbjct: 204 RKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRS 254
>Q9CQU1:MFAP1_MOUSE Microfibrillar-associated protein 1 - Mus musculus (Mouse)| Length = 439 Score = 34.3 bits (77), Expect = 1.5 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Frame = +3 Query: 933 EKIREEQRKALLALKTEERKVEVDKD---LQSLQPLSTKKANDEIFIKLGSDKEKKKEST 1103 +++ EE+RK L + EE K E++++ L +L L+T NDE + +E K+ Sbjct: 230 KRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKR 289 Query: 1104 ERDER 1118 ER++R Sbjct: 290 EREDR 294
>P55080:MFAP1_CHICK Microfibrillar-associated protein 1 - Gallus gallus (Chicken)| Length = 442 Score = 34.3 bits (77), Expect = 1.5 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 933 EKIREEQRKALLALKTEERKVEVDKD---LQSLQPLSTKKANDEIFIKLGSDKEKKKEST 1103 +++ EE+RK L + EE K E++++ L +L L T NDE + +E K+ Sbjct: 233 KRLAEERRKYTLKIVEEEAKKELEENKRSLAALDALDTDDENDEEEYEAWKVRELKRIKR 292 Query: 1104 ERDER 1118 +R+ER Sbjct: 293 DREER 297
>Q96M91:CCD11_HUMAN Coiled-coil domain-containing protein 11 - Homo sapiens (Human)| Length = 514 Score = 34.3 bits (77), Expect = 1.5 Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Frame = +3 Query: 933 EKIREEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFI--KLGSDKEKKKESTE 1106 EK +E++ +L ++ E DK+L+ L+ + ++ DE+ KL ++ ++E+ E Sbjct: 353 EKAQEKEFDRILEEDKAKKLAEKDKELR-LEKEARRQLVDEVMCTRKLQVQEKLQREAKE 411 Query: 1107 RDERAKKSLSINEFLK 1154 ++ERA + INE LK Sbjct: 412 QEERAMEQKHINESLK 427
>Q8NI27:THOC2_HUMAN THO complex subunit 2 - Homo sapiens (Human)| Length = 1478 Score = 33.9 bits (76), Expect = 2.0 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 3/134 (2%) Frame = +3 Query: 735 GSSTDEGLAQETDEALKIEDNAPSAEKQGEQDDAPPTT--EENKGQKDGAAKXXXXXXXX 908 G+S++ +++A+K D EK+ E+ + P T E KDG Sbjct: 1136 GNSSNGNSGSNSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGK---------- 1185 Query: 909 XXXXXXXYEKIREEQ-RKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKE 1085 EK +EE+ K A +T+ER + DK+ + + +KA DE F + E Sbjct: 1186 --------EKPKEERPNKDEKARETKERTPKSDKEKEKFK--KEEKAKDEKFKTTVPNAE 1235 Query: 1086 KKKESTERDERAKK 1127 K ST+ ER K+ Sbjct: 1236 SK--STQEREREKE 1247
>Q8K1L0:CREB5_MOUSE cAMP response element-binding protein 5 - Mus musculus (Mouse)| Length = 357 Score = 33.9 bits (76), Expect = 2.0 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -1 Query: 636 HQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCHSH 484 HQ HH Y H P+P Q Q HPHH HS+S H+H Sbjct: 128 HQHQTLPPHHPYPHQHQHPAHHPHPQPHHQ-QNHPHH-----HSHSHLHAH 172
>Q02930:CREB5_HUMAN cAMP response element-binding protein 5 - Homo sapiens (Human)| Length = 508 Score = 33.9 bits (76), Expect = 2.0 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -1 Query: 636 HQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCHSH 484 HQ HH Y H P+P Q Q HPHH HS+S H+H Sbjct: 279 HQHQTLPPHHPYPHQHQHPAHHPHPQPHHQ-QNHPHH-----HSHSHLHAH 323
>Q8CXB7:TIG_OCEIH Trigger factor - Oceanobacillus iheyensis| Length = 428 Score = 33.5 bits (75), Expect = 2.6 Identities = 30/107 (28%), Positives = 51/107 (47%) Frame = +3 Query: 810 EKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYEKIREEQRKALLALKTEER 989 +K GE+ + T E +D A K KI E + K L L E Sbjct: 207 KKAGEETEVTVTFPEEYHAEDLAGKEAVFNV-----------KINEVKAKELPELDDEFA 255 Query: 990 KVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAKKS 1130 K +VD++++SL L KK N+ L ++K+++ E+ +R+E +K+ Sbjct: 256 K-DVDEEVESLDELKKKKRNE-----LETNKKQEVENKKREELIQKA 296
>P09741:TNNT2_RABIT Troponin T, cardiac muscle - Oryctolagus cuniculus (Rabbit)| Length = 301 Score = 33.1 bits (74), Expect = 3.4 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%) Frame = +3 Query: 696 QGMKRDGAGRGNWGSSTDEGLAQETDEALK-IEDNAPSAEKQGEQDDAPPTTEENKGQKD 872 Q + A +W DE A E +EA E A + E Q E+D EE+K +D Sbjct: 15 QEAEEAAAEEEDWREDEDEQEAGEEEEAGGGREAEAETEETQAEEDGQE---EEDKEDED 71 Query: 873 GAA-----KXXXXXXXXXXXXXXXYEKI------REEQRKALLALKT------EERKVEV 1001 G K E++ R+ K L L+T E RK E Sbjct: 72 GPVEESKPKPRPFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQTLIEAHFENRKKE- 130 Query: 1002 DKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDERAKK 1127 +++L SL+ K+ D +++ +++EK++++ +ERA++ Sbjct: 131 EEELVSLKDRIEKRRADAEQLRIRAEREKERQNRLAEERARR 172
>A2AJT4:SFR18_MOUSE Splicing factor, arginine/serine-rich 130 - Mus musculus (Mouse)| Length = 805 Score = 33.1 bits (74), Expect = 3.4 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = -2 Query: 1493 EANPDDQLRYTKSSNDTLKEKKNTLFVPINRDTIIQRRAKFKGKSRQRGWRSGQHST 1323 E N L +++ D + +KK T P ++++ + + KGK ++RG RSG S+ Sbjct: 462 EQNSLSLLEASEADRDAVNDKKRT---PNEAPSVLEPKREHKGKEKERGSRSGSSSS 515
>Q6C8C5:CWC22_YARLI Pre-mRNA-splicing factor CWC22 - Yarrowia lipolytica (Candida| lipolytica) Length = 954 Score = 33.1 bits (74), Expect = 3.4 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 16/164 (9%) Frame = +3 Query: 648 RPPRRNYERHSGTGRGQGMKRDGAGR---GNWGSSTDEGLAQETDEALKIEDNAPSAEKQ 818 R PRR RH + R + +R+G GR G G LA E + ++ + +K+ Sbjct: 63 RSPRRKRRRHRTSRRSRRSRREGDGRRKDGPRGHDDRSPLAPREVEDVTVKREDSTNDKE 122 Query: 819 GEQDDAPPTTEEN----KGQKDGAAKXXXXXXXXXXXXXXXYEKIRE---------EQRK 959 D +E + +KD + +K++ E+ K Sbjct: 123 STHDKESTNDKERNVSMEDRKDTSEDVVEDVEEGDPSEEALEKKVKNPEDDLEAAAEELK 182 Query: 960 ALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKK 1091 L+ LK+ R V K +++LQ L + + F K+ D KK Sbjct: 183 KLMELKSGGRYVPPAK-IRALQKLLVQDKTSKEFQKIQFDNLKK 225
>Q62565:SRY_MUSSI Sex-determining region Y protein - Mus spicilegus (Steppe mouse)| Length = 311 Score = 33.1 bits (74), Expect = 3.4 Identities = 26/107 (24%), Positives = 35/107 (32%), Gaps = 3/107 (2%) Frame = -1 Query: 837 EHHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSP---GHDQSHCGAH 667 +HH Q +H+ Q + H HQ + H HHH H Q H Sbjct: 163 DHHQQQQQQQFHDHHQQKQQFHD------HQQQQQQFHDHHHHQQQQQFHDHQQQQQQLH 216 Query: 666 SFSEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHH 526 + Q + Q H H + RP+ Q Q H HH Sbjct: 217 NHHH---QQQQQFHDYPQQQQQFHDHPQQKQQFHDRPQQQQQFHDHH 260
>P58002:IF2_LACLA Translation initiation factor IF-2 - Lactococcus lactis subsp.| lactis (Streptococcus lactis) Length = 944 Score = 32.7 bits (73), Expect = 4.5 Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 6/71 (8%) Frame = +3 Query: 672 RHSGTGRGQGMKRDGAGRGNWGSSTD------EGLAQETDEALKIEDNAPSAEKQGEQDD 833 R SG G+ QG KRD +TD G D K DN K G + Sbjct: 250 RSSGQGQNQGQKRDKFASSGSAPATDSFTPATSGKTSRRDRDRKKSDNNRDNTKDGNRKG 309 Query: 834 APPTTEENKGQ 866 P +N+ Q Sbjct: 310 GPLRVNDNRNQ 320
>Q05738:SRY_MOUSE Sex-determining region Y protein - Mus musculus (Mouse)| Length = 395 Score = 32.7 bits (73), Expect = 4.5 Identities = 24/105 (22%), Positives = 33/105 (31%) Frame = -1 Query: 837 EHHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFS 658 +HH H Q +H+ Q + H Q Q + HH HD H Sbjct: 204 DHHHHHQEQQFHDHHQQQQQFHDHQQQQQQQQQ--QQFHDHHQQKQQFHDHHHHQQQQQF 261 Query: 657 EAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHN 523 Q + Q H H + P+ Q Q H HH+ Sbjct: 262 HDHQQQQQQFHDHQQQQHQFHDHPQQKQQFHDHPQQQQQFHDHHH 306
>P29776:ETS6_DROME DNA-binding protein D-ETS-6 - Drosophila melanogaster (Fruit fly)| Length = 475 Score = 32.7 bits (73), Expect = 4.5 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = -1 Query: 834 HHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSE 655 +H A A Q H P LH P ++ H LH H SSP + S G S S Sbjct: 361 NHHAGGAMQLGRHPPP---LHHHPQHSHPHHQLGQPHFLHPHHSSPASNSSSLGFPSSST 417 Query: 654 AVSQS 640 A SQ+ Sbjct: 418 ASSQA 422
>P62134:RAD50_METMP DNA double-strand break repair rad50 ATPase - Methanococcus| maripaludis Length = 993 Score = 32.3 bits (72), Expect = 5.9 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 10/84 (11%) Frame = +3 Query: 933 EKIREEQ--RKALLALKTEERKVEV--------DKDLQSLQPLSTKKANDEIFIKLGSDK 1082 EKI+E + K + +K ++ VE D +++ + L TKK + E +K D Sbjct: 362 EKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFDL 421 Query: 1083 EKKKESTERDERAKKSLSINEFLK 1154 EKK ++ E DE+ K + +F K Sbjct: 422 EKKLQN-ETDEKTKLISELTDFEK 444
>Q6PDH0:PHLB1_MOUSE Pleckstrin homology-like domain family B member 1 - Mus musculus| (Mouse) Length = 1371 Score = 32.3 bits (72), Expect = 5.9 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 7/143 (4%) Frame = +3 Query: 699 GMKRDGAGRGNWGS---STDEGLAQE---TDEALKIEDNAPSAEKQGEQDDAPPTTEENK 860 G + GA + W S S +E L +E T+ + ++AP A+ QGE EE + Sbjct: 670 GEESGGASQRLWESMERSDEENLKEECSSTESTQQEHEDAPGAKHQGEV----LAVEEER 725 Query: 861 GQKDGAAKXXXXXXXXXXXXXXXYEKIRE-EQRKALLALKTEERKVEVDKDLQSLQPLST 1037 Q G + E RE E +ALL + E + + K+ +++ L Sbjct: 726 AQVLGRVEQLKIRVKELEQQLQ--EAAREAEMERALLQGEREAERASLQKEQRAVDQLQE 783 Query: 1038 KKANDEIFIKLGSDKEKKKESTE 1106 K E I+ DKE TE Sbjct: 784 KLVALETGIQKDRDKEADALETE 806
>P29374:ARI4A_HUMAN AT-rich interactive domain-containing protein 4A - Homo sapiens| (Human) Length = 1257 Score = 32.3 bits (72), Expect = 5.9 Identities = 27/125 (21%), Positives = 59/125 (47%) Frame = +3 Query: 756 LAQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKDGAAKXXXXXXXXXXXXXXXYE 935 L + +EALK++ P E + E ++ + E++ +++ K + Sbjct: 424 LEESMEEALKLDQEMPLTEVKSEPEENIDSNSESE-REEIELKSPRGRRRIARDVNSIKK 482 Query: 936 KIREEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDE 1115 +I EE+ + L E K +VD D ++ + KK N+ + + + K+K+K+ ++++ Sbjct: 483 EIEEEKTEDKLKDNDTENK-DVDDDYETAE----KKENELLLGRKNTPKQKEKKIKKQED 537 Query: 1116 RAKKS 1130 K S Sbjct: 538 SDKDS 542
>P15205:MAP1B_RAT Microtubule-associated protein 1B - Rattus norvegicus (Rat)| Length = 2459 Score = 32.0 bits (71), Expect = 7.7 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = +3 Query: 942 REEQRKALLALKTEERKVEVDKDLQSLQPLSTKKAN---DEIFIKLGSDKEKKKESTERD 1112 +EE +K + +E K E+ K+++ PL K DE +KE KKE + Sbjct: 674 KEEAKKEIKKEIKKEEKKELKKEVKKETPLKDAKKEVKKDEKKEVKKEEKEPKKEIKKIS 733 Query: 1113 ERAKKSLSINEFLKPA 1160 + KKS +++ KPA Sbjct: 734 KDIKKSTPLSDTKKPA 749
>Q99PT9:KIF19_MOUSE Kinesin-like protein KIF19 - Mus musculus (Mouse)| Length = 997 Score = 32.0 bits (71), Expect = 7.7 Identities = 16/64 (25%), Positives = 31/64 (48%) Frame = +3 Query: 936 KIREEQRKALLALKTEERKVEVDKDLQSLQPLSTKKANDEIFIKLGSDKEKKKESTERDE 1115 K REE+RK + E+ + + +L+P A + I +G K+ +KE ++ Sbjct: 474 KWREERRKESYTKEDSEKDSDTGDEPDNLEPPEVASARENIAALVGEQKKLRKEKLALEQ 533 Query: 1116 RAKK 1127 R ++ Sbjct: 534 RCRE 537
>Q6CI62:ASF1_YARLI Histone chaperone ASF1 - Yarrowia lipolytica (Candida lipolytica)| Length = 265 Score = 32.0 bits (71), Expect = 7.7 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +3 Query: 711 DGAGRGNWGSSTDEGLAQETDEALKIEDNAPSAEKQGEQDDAPPTTEENKGQKD 872 +G G G+ G DE L + +DE +++ D+ E +GE D +E+K KD Sbjct: 213 EGDGDGD-GDGEDEDLEEASDEEMEVVDDEVGEESEGEDD------KEDKDDKD 259
>P05227:HRP1_PLAFA Histidine-rich protein precursor - Plasmodium falciparum| Length = 332 Score = 32.0 bits (71), Expect = 7.7 Identities = 26/140 (18%), Positives = 38/140 (27%) Frame = -1 Query: 840 EEHHPAHPASQRWEHYPQF*ELHQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSF 661 + HH H A H H D H + HH + H AH Sbjct: 56 DAHHAHHVADAHHAH-------HAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHA 108 Query: 660 SEAVSQSRHQTHCCGNHHVYLRLHGMGVEGLSPRPRLQLQRHPHHNLPGSHSYSRCHSHG 481 A + + H H HH + + H HH H++ ++H Sbjct: 109 HHA-ADAHHAHHAADAHHAHHAADAHHAHHAADA------HHAHHAADAHHAHHAAYAHH 161 Query: 480 SGRTGRLLCRGQVHHGQILH 421 + HH H Sbjct: 162 AHHASDAHHAADAHHAAYAH 181
>P33293:BAF1_KLUMA Transcription factor BAF1 - Kluyveromyces marxianus (Yeast)| (Candida kefyr) Length = 496 Score = 32.0 bits (71), Expect = 7.7 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -1 Query: 774 HQFPVQDLHQWKIPSSHGLHHHVSSPGHDQSHCGAHSFSEAVSQSRHQTHCCGNHHVYL- 598 HQ D HQ ++ H H H H H S+ Q++HQ H ++HVY Sbjct: 283 HQISGADQHQHQLQHQHQHQHQ-----HQHQHQHQHQ-SQDQHQNQHQQHVGNDNHVYQD 336 Query: 597 RLH 589 R+H Sbjct: 337 RIH 339 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 205,671,198 Number of extensions: 3886797 Number of successful extensions: 14884 Number of sequences better than 10.0: 43 Number of HSP's gapped: 14664 Number of HSP's successfully gapped: 52 Length of query: 540 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 422 Effective length of database: 68,319,629 Effective search space: 28830883438 Effective search space used: 28830883438 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
