ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf127l23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT834047.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA030K03, full insert sequence Length = 1504 Score = 315 bits (159), Expect = 3e-82 Identities = 291/335 (86%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 926 aaggagggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgag 985 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 |||| |||||| ||||||||||| |||||||||| || || || || ||| ||||||| Sbjct: 986 gagtttgagaaattaagggaggaaaagcggaaagctcttcttgctttcaaggctgaagag 1045 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || |||||||| ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1046 aggaaggttgaggttgataaggacctgcagtctatgcagccactttctaccaagaaagga 1105 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| ||||||||||| |||||||||||||||| ||||||||||||| | | ||| Sbjct: 1106 aatgatgaaattttcattaagctgggttctgacaaggataagaagaaggaaaatgctgag 1165 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 |||||||| ||||||||||||||| | |||||||| |||||||| |||||||| || ||| Sbjct: 1166 cgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaagga 1225 Query: 1167 gagcggtactacggcggccgtgggcgtgggagggg 1201 | ||||||| ||||||||||| ||||| ||||| Sbjct: 1226 taaaggtactatggcggccgtggtcgtggaagggg 1260 Score = 170 bits (86), Expect = 1e-38 Identities = 203/242 (83%) Strand = Plus / Plus Query: 597 ggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccgcct 656 |||||||| |||||||| ||||| || |||| | ||| || || |||||||| ||||| Sbjct: 665 ggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccc 724 Query: 657 cggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggt 716 |||||||| ||||||||||||||||| ||||| ||||| | | |||||| ||||||||| Sbjct: 725 cggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggt 784 Query: 717 gcaggccgtgggaactggggatcttccactgatgaaggtcttgcacaggaaactgatgaa 776 ||||| ||||||||||||||| || | |||||||| | |||||||||||| ||||| ||| Sbjct: 785 gcagggcgtgggaactggggaactgctactgatgaggctcttgcacaggagactgaggaa 844 Query: 777 gctctcaaaattgaggataatgctcccagcgctgagaagcagggtgagcaggatgatgct 836 || | || ||||||| | |||||| | |||||||| ||||||||||||||||||||| Sbjct: 845 gccttgaaggttgaggagagtgctcctattgctgagaaacagggtgagcaggatgatgct 904 Query: 837 cc 838 || Sbjct: 905 cc 906 Score = 83.8 bits (42), Expect = 2e-12 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagcc---aagttgccgaccaaaccc 368 ||||| |||||||||||||||||| ||| | |||| ||| ||||| || ||||| ||| Sbjct: 368 gcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagccc 427 Query: 369 gctcccccgggacaggctgcgagggatgcgaggaacggaggcccaccatcacgtggagga 428 |||||||| ||||||||| |||| || || || || ||||||||||||||||| Sbjct: 428 gctccccccacccaggctgcgcgggaggcacggggtggtggtgcaccatcacgtggagga 487 Query: 429 tttggccgtggtgaacctggccgcggcagaggaggcggccggtacggccagaaccgtgac 488 |||||||||||||| | |||||| |||||||| || | | || |||||||||||||| Sbjct: 488 tttggccgtggtgagcgtggccgtggcagaggtggacggggatatggccagaaccgtgat 547 Query: 489 tatggcagcgagaatacgaatggctaccagggaggttatggtgg 532 | ||| | || ||| | |||||||||||||| ||||| ||||| Sbjct: 548 tttggtggagacaatgccaatggctaccagggtggttacggtgg 591 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 1425 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 1482 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 188 cgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacgacgatccctc 247 ||||||| || |||||||| |||||| |||| || || |||||||||||||| ||||| Sbjct: 238 cgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctc 297 Query: 248 gcagctgcttgctgcggcgcaggccgcggcg 278 ||||||||| || ||||| |||||||||| Sbjct: 298 gcagctgctggccgcggccgcggccgcggcg 328
>ref|NM_001050633.1| Oryza sativa (japonica cultivar-group) Os01g0721900 (Os01g0721900) mRNA, complete cds Length = 1609 Score = 315 bits (159), Expect = 3e-82 Identities = 291/335 (86%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 920 aaggagggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgag 979 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 |||| |||||| ||||||||||| |||||||||| || || || || ||| ||||||| Sbjct: 980 gagtttgagaaattaagggaggaaaagcggaaagctcttcttgctttcaaggctgaagag 1039 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || |||||||| || || ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1040 aggaaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaagga 1099 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| ||||||||||| |||||||||||||||| ||||||||||||| | | ||| Sbjct: 1100 aatgatgaaattttcattaagctgggttctgacaaggataagaagaaggaaaatgctgag 1159 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 |||||||| ||||||||||||||| | |||||||| |||||||| |||||||| || ||| Sbjct: 1160 cgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaagga 1219 Query: 1167 gagcggtactacggcggccgtgggcgtgggagggg 1201 || ||||||| ||||||||||| ||||| ||||| Sbjct: 1220 gaaaggtactatggcggccgtggtcgtggaagggg 1254 Score = 170 bits (86), Expect = 1e-38 Identities = 203/242 (83%) Strand = Plus / Plus Query: 597 ggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccgcct 656 |||||||| |||||||| ||||| || |||| | ||| || || |||||||| ||||| Sbjct: 659 ggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccc 718 Query: 657 cggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggt 716 |||||||| ||||||||||||||||| ||||| ||||| | | |||||| ||||||||| Sbjct: 719 cggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggt 778 Query: 717 gcaggccgtgggaactggggatcttccactgatgaaggtcttgcacaggaaactgatgaa 776 ||||| ||||||||||||||| || | |||||||| | |||||||||||| ||||| ||| Sbjct: 779 gcagggcgtgggaactggggaactgctactgatgaggctcttgcacaggagactgaggaa 838 Query: 777 gctctcaaaattgaggataatgctcccagcgctgagaagcagggtgagcaggatgatgct 836 || | || ||||||| | |||||| | |||||||| ||||||||||||||||||||| Sbjct: 839 gccttgaaggttgaggagagtgctcctattgctgagaaacagggtgagcaggatgatgct 898 Query: 837 cc 838 || Sbjct: 899 cc 900 Score = 83.8 bits (42), Expect = 2e-12 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagcc---aagttgccgaccaaaccc 368 ||||| |||||||||||||||||| ||| | |||| ||| ||||| || ||||| ||| Sbjct: 362 gcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagccc 421 Query: 369 gctcccccgggacaggctgcgagggatgcgaggaacggaggcccaccatcacgtggagga 428 |||||||| ||||||||| |||| || || || || ||||||||||||||||| Sbjct: 422 gctccccccacccaggctgcgcgggaggcacggggtggtggtgcaccatcacgtggagga 481 Query: 429 tttggccgtggtgaacctggccgcggcagaggaggcggccggtacggccagaaccgtgac 488 |||||||||||||| | |||||| |||||||| || | | || |||||||||||||| Sbjct: 482 tttggccgtggtgagcgtggccgtggcagaggtggacggggatatggccagaaccgtgat 541 Query: 489 tatggcagcgagaatacgaatggctaccagggaggttatggtgg 532 | ||| | || ||| | |||||||||||||| ||||| ||||| Sbjct: 542 tttggtggagacaatgccaatggctaccagggtggttacggtgg 585 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 1419 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 1476 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 188 cgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacgacgatccctc 247 ||||||| || |||||||| |||||| |||| || || |||||||||||||| ||||| Sbjct: 232 cgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctc 291 Query: 248 gcagctgcttgctgcggcgcaggccgcggcg 278 ||||||||| || ||||| |||||||||| Sbjct: 292 gcagctgctggccgcggccgcggccgcggcg 322 Score = 46.1 bits (23), Expect = 0.40 Identities = 51/60 (85%), Gaps = 4/60 (6%) Strand = Plus / Plus Query: 1459 tttgtataccggagttgatcgtcgggattagcctctagctagttttgtaggctagctttt 1518 ||||||||||||||||| | ||| | ||||||||||| |||||||||||||||||| Sbjct: 1516 tttgtataccggagttgcttgtcagaattagcctctaa----ttttgtaggctagctttt 1571
>dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044L15, full insert sequence Length = 1611 Score = 307 bits (155), Expect = 7e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 921 aaggagggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgag 980 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 |||| |||||| ||||||||||| |||||||||| || || || || ||| ||||||| Sbjct: 981 gagtttgagaaattaagggaggaaaagcggaaagctcttcttgctttcaaggctgaagag 1040 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || |||||||| || || ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1041 aggaaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaagga 1100 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| ||||||||||| |||||||||||||||| ||||||| ||||| | | ||| Sbjct: 1101 aatgatgaaattttcattaagctgggttctgacaaggataagaagagggaaaatgctgag 1160 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 |||||||| ||||||||||||||| | |||||||| |||||||| |||||||| || ||| Sbjct: 1161 cgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaagga 1220 Query: 1167 gagcggtactacggcggccgtgggcgtgggagggg 1201 || ||||||| ||||||||||| ||||| ||||| Sbjct: 1221 gaaaggtactatggcggccgtggtcgtggaagggg 1255 Score = 170 bits (86), Expect = 1e-38 Identities = 203/242 (83%) Strand = Plus / Plus Query: 597 ggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccgcct 656 |||||||| |||||||| ||||| || |||| | ||| || || |||||||| ||||| Sbjct: 660 ggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccc 719 Query: 657 cggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggt 716 |||||||| ||||||||||||||||| ||||| ||||| | | |||||| ||||||||| Sbjct: 720 cggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggt 779 Query: 717 gcaggccgtgggaactggggatcttccactgatgaaggtcttgcacaggaaactgatgaa 776 ||||| ||||||||||||||| || | |||||||| | |||||||||||| ||||| ||| Sbjct: 780 gcagggcgtgggaactggggaactgctactgatgaggctcttgcacaggagactgaggaa 839 Query: 777 gctctcaaaattgaggataatgctcccagcgctgagaagcagggtgagcaggatgatgct 836 || | || ||||||| | |||||| | |||||||| ||||||||||||||||||||| Sbjct: 840 gccttgaaggttgaggagagtgctcctattgctgagaaacagggtgagcaggatgatgct 899 Query: 837 cc 838 || Sbjct: 900 cc 901 Score = 83.8 bits (42), Expect = 2e-12 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagcc---aagttgccgaccaaaccc 368 ||||| |||||||||||||||||| ||| | |||| ||| ||||| || ||||| ||| Sbjct: 363 gcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagccc 422 Query: 369 gctcccccgggacaggctgcgagggatgcgaggaacggaggcccaccatcacgtggagga 428 |||||||| ||||||||| |||| || || || || ||||||||||||||||| Sbjct: 423 gctccccccacccaggctgcgcgggaggcacggggtggtggtgcaccatcacgtggagga 482 Query: 429 tttggccgtggtgaacctggccgcggcagaggaggcggccggtacggccagaaccgtgac 488 |||||||||||||| | |||||| |||||||| || | | || |||||||||||||| Sbjct: 483 tttggccgtggtgagcgtggccgtggcagaggtggacggggatatggccagaaccgtgat 542 Query: 489 tatggcagcgagaatacgaatggctaccagggaggttatggtgg 532 | ||| | || ||| | |||||||||||||| ||||| ||||| Sbjct: 543 tttggtggagacaatgccaatggctaccagggtggttacggtgg 586 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 1420 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 1477 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 188 cgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacgacgatccctc 247 ||||||| || |||||||| |||||| |||| || || |||||||||||||| ||||| Sbjct: 233 cgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctc 292 Query: 248 gcagctgcttgctgcggcgcaggccgcggcg 278 ||||||||| || ||||| |||||||||| Sbjct: 293 gcagctgctggccgcggccgcggccgcggcg 323 Score = 46.1 bits (23), Expect = 0.40 Identities = 51/60 (85%), Gaps = 4/60 (6%) Strand = Plus / Plus Query: 1459 tttgtataccggagttgatcgtcgggattagcctctagctagttttgtaggctagctttt 1518 ||||||||||||||||| | ||| | ||||||||||| |||||||||||||||||| Sbjct: 1517 tttgtataccggagttgcttgtcagaattagcctctaa----ttttgtaggctagctttt 1572
>gb|BT016648.1| Zea mays clone Contig481 mRNA sequence Length = 1556 Score = 281 bits (142), Expect = 4e-72 Identities = 289/338 (85%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||||| | ||||||| |||||||| || || |||||||| |||||||||||||| ||| Sbjct: 870 aaggatgctactgcaaatgaggaggaagaaaaggaagaggacaaggagatgactctggag 929 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 || | ||||||||||| ||||| || ||||||||||||| ||||||||| |||| || Sbjct: 930 gaatttgagaaaataagagaggagaagaggaaagcactacttgcattgaaggctgaggag 989 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || || ||||||||||||||||| ||||||||||||||||||| || | |||||||| Sbjct: 990 aggaaagttgaagttgacaaggatttgcagtctctgcagccactttcaaacaagaaagaa 1049 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| |||||||||| |||||||||||||||| ||||||||||||| | | ||| Sbjct: 1050 aatgatgaagttttcattaagctgggttctgacaaggataagaagaaggaaaatgctgag 1109 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 || ||||| |||||||||||||| | ||||||||||||||||| || ||||| || ||| Sbjct: 1110 cgtgatgagcgtgccaagaagtcggtgagcatcaacgagttcctgaaacctgctgaagga 1169 Query: 1167 gagcggtactacggcggccgtgggcgtgggaggggccg 1204 || ||||||||||||||||||| ||||| |||||||| Sbjct: 1170 gaaaggtactacggcggccgtggccgtggaaggggccg 1207 Score = 133 bits (67), Expect = 2e-27 Identities = 136/159 (85%) Strand = Plus / Plus Query: 594 ggcggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccg 653 |||||||| ||||||||||||||| | || |||||||| ||| ||||||||||| || Sbjct: 600 ggcggaggcagacgtggtggttacaggaatgttgagtttgctgatgactctgagaggcca 659 Query: 654 cctcggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgat 713 || ||||||||||||||||||||||| |||||||| | |||| | | |||||| |||||| Sbjct: 660 ccacggagaaactatgagcgccacagcgggactggccatggctatgagatgaagcgtgat 719 Query: 714 ggtgcaggccgtgggaactggggatcttccactgatgaa 752 || ||||| |||||||||||||| || ||||||||||| Sbjct: 720 ggcgcagggcgtgggaactggggcactgccactgatgaa 758 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacga 238 ||||||||| |||||| | ||||||||| ||||| ||||| || |||||||||||||| Sbjct: 173 cgccgccgctgccatggccaccctcaaccctttcgaactcctcggcgccgacgacaacga 232 Query: 239 cgatccctcgcagctgcttgctgcggcg 266 ||| || |||||||| |||| |||||| Sbjct: 233 cgacccgacgcagctgattgcggcggcg 260 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 420 cgtggaggatttggccgtggtgaacctggccgcggcagagg 460 |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 411 cgtggaggctttggccgtggtgaacgtggccgtggcagagg 451 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagccaagttgccgaccaaacccgct 371 ||||||||||||||||| |||||| | | |||| | ||||||| |||||||| |||||| Sbjct: 303 gcgcctgctgggaaggctgcccagcctgcggcgaccaccaagttcccgaccaagcccgct 362 Query: 372 cc 373 || Sbjct: 363 cc 364 Score = 42.1 bits (21), Expect = 6.2 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 1368 tttaaattttgcccgacgttggattattgtgtcacgg-ttaatcggaacaaataatg 1423 ||||||||||| |||||||| ||| |||| ||||| |||| |||||||||||||| Sbjct: 1376 tttaaattttgtccgacgttaaatttctgtgccacggtttaaacggaacaaataatg 1432
>gb|AY103606.1| Zea mays PCO150737 mRNA sequence Length = 1811 Score = 281 bits (142), Expect = 4e-72 Identities = 289/338 (85%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||||| | ||||||| |||||||| || || |||||||| |||||||||||||| ||| Sbjct: 1107 aaggatgctactgcaaatgaggaggaagaaaaggaagaggacaaggagatgactctggag 1166 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 || | ||||||||||| ||||| || ||||||||||||| ||||||||| |||| || Sbjct: 1167 gaatttgagaaaataagagaggagaagaggaaagcactacttgcattgaaggctgaggag 1226 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || || ||||||||||||||||| ||||||||||||||||||| || | |||||||| Sbjct: 1227 aggaaagttgaagttgacaaggatttgcagtctctgcagccactttcaaacaagaaagaa 1286 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| |||||||||| |||||||||||||||| ||||||||||||| | | ||| Sbjct: 1287 aatgatgaagttttcattaagctgggttctgacaaggataagaagaaggaaaatgctgag 1346 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 || ||||| |||||||||||||| | ||||||||||||||||| || ||||| || ||| Sbjct: 1347 cgtgatgagcgtgccaagaagtcggtgagcatcaacgagttcctgaaacctgctgaagga 1406 Query: 1167 gagcggtactacggcggccgtgggcgtgggaggggccg 1204 || ||||||||||||||||||| ||||| |||||||| Sbjct: 1407 gaaaggtactacggcggccgtggccgtggaaggggccg 1444 Score = 133 bits (67), Expect = 2e-27 Identities = 136/159 (85%) Strand = Plus / Plus Query: 594 ggcggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccg 653 |||||||| ||||||||||||||| | || |||||||| ||| ||||||||||| || Sbjct: 837 ggcggaggcagacgtggtggttacaggaatgttgagtttgctgatgactctgagaggcca 896 Query: 654 cctcggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgat 713 || ||||||||||||||||||||||| |||||||| | |||| | | |||||| |||||| Sbjct: 897 ccacggagaaactatgagcgccacagcgggactggccatggctatgagatgaagcgtgat 956 Query: 714 ggtgcaggccgtgggaactggggatcttccactgatgaa 752 || ||||| |||||||||||||| || ||||||||||| Sbjct: 957 ggcgcagggcgtgggaactggggcactgccactgatgaa 995 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacga 238 ||||||||| |||||| | ||||||||| ||||| ||||| || |||||||||||||| Sbjct: 410 cgccgccgctgccatggccaccctcaaccctttcgaactcctcggcgccgacgacaacga 469 Query: 239 cgatccctcgcagctgcttgctgcggcg 266 ||| || |||||||| |||| |||||| Sbjct: 470 cgacccgacgcagctgattgcggcggcg 497 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 420 cgtggaggatttggccgtggtgaacctggccgcggcagagg 460 |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 648 cgtggaggctttggccgtggtgaacgtggccgtggcagagg 688 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagccaagttgccgaccaaacccgct 371 ||||||||||||||||| |||||| | | |||| | ||||||| |||||||| |||||| Sbjct: 540 gcgcctgctgggaaggctgcccagcctgcggcgaccaccaagttcccgaccaagcccgct 599 Query: 372 cc 373 || Sbjct: 600 cc 601 Score = 42.1 bits (21), Expect = 6.2 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 1368 tttaaattttgcccgacgttggattattgtgtcacgg-ttaatcggaacaaataatg 1423 ||||||||||| |||||||| ||| |||| ||||| |||| |||||||||||||| Sbjct: 1613 tttaaattttgtccgacgttacatttctgtgccacggtttaaacggaacaaataatg 1669
>gb|AF113521.1|AF113521 Zea mays putative transcription factor mRNA sequence Length = 1212 Score = 268 bits (135), Expect = 6e-68 Identities = 289/339 (85%), Gaps = 1/339 (0%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||||| | ||||||| |||||||| || || |||||||| |||||||||||||| ||| Sbjct: 576 aaggatgctactgcaaatgaggaggaagaaaaggaagaggacaaggagatgactctggag 635 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 || | ||||||||||| ||||| || ||||||||||||| ||||||||| |||| || Sbjct: 636 gaatttgagaaaataagagaggagaagaggaaagcactacttgcattgaaggctgaggag 695 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || || ||||||||||||||||| ||||||||||||||||||| || | |||||||| Sbjct: 696 aggaaagttgaagttgacaaggatttgcagtctctgcagccactttcaaacaagaaagaa 755 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtac-cga 1105 |||||||| |||||||||| |||||||||||||||| ||||||||||||| | | || Sbjct: 756 aatgatgaagttttcattaagctgggttctgacaaggataagaagaaggaaaatgcttga 815 Query: 1106 gcgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggg 1165 ||| ||||| |||||||||||||| | ||||||||||||||||| || ||||| || || Sbjct: 816 gcgtgatgagcgtgccaagaagtcggtgagcatcaacgagttcctgaaacctgctgaagg 875 Query: 1166 agagcggtactacggcggccgtgggcgtgggaggggccg 1204 ||| ||||||||||||||||||| ||||| |||||||| Sbjct: 876 agaaaggtactacggcggccgtggccgtggaaggggccg 914 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacga 238 ||||||||| |||||| | ||||||||| ||||| ||||| || |||||||||||||| Sbjct: 185 cgccgccgctgccatggccaccctcaaccctttcgaactcctcggcgccgacgacaacga 244 Query: 239 cgatccctcgcagctgcttgctgcggcg 266 ||| || |||||||| |||| |||||| Sbjct: 245 cgacccgacgcagctgattgcggcggcg 272 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 420 cgtggaggatttggccgtggtgaacctggccgcggcagagg 460 |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 423 cgtggaggctttggccgtggtgaacgtggccgtggcagagg 463 Score = 52.0 bits (26), Expect = 0.006 Identities = 53/62 (85%) Strand = Plus / Plus Query: 312 gcgcctgctgggaaggcggcccagaccggggcggcagccaagttgccgaccaaacccgct 371 ||||||||||||||||| |||||| | | |||| | ||||||| |||||||| |||||| Sbjct: 315 gcgcctgctgggaaggctgcccagcctgcggcgaccaccaagttcccgaccaagcccgct 374 Query: 372 cc 373 || Sbjct: 375 cc 376 Score = 42.1 bits (21), Expect = 6.2 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 1368 tttaaattttgcccgacgttggattattgtgtcacgg-ttaatcggaacaaataatg 1423 ||||||||||| |||||||| ||| |||| ||||| |||| |||||||||||||| Sbjct: 1083 tttaaattttgtccgacgttaaatttctgtgccacggtttaaacggaacaaataatg 1139
>gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence Length = 869 Score = 258 bits (130), Expect = 6e-65 Identities = 286/338 (84%) Strand = Plus / Plus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataaggagatgactctagag 926 ||||||| | ||||||| |||||||| || || |||||||| ||||||||| |||| ||| Sbjct: 206 aaggatgctactgcaaatgaggaggaagaaaaggaagaggacaaggagatgcctctggag 265 Query: 927 gagtacgagaaaataagggaggaacagcggaaagcactactagcattgaagactgaagaa 986 || | ||||||||||| ||||| || ||||||||||||| || |||||| |||| || Sbjct: 266 gaatttgagaaaataagagaggagaagaggaaagcactacttgcgttgaaggctgaggag 325 Query: 987 agaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctaccaagaaagcc 1046 || || ||||||||||||||||| |||| |||||||||||||| || | |||||||| Sbjct: 326 aggaaagttgaagttgacaaggatctgcgttctctgcagccactttcaaacaagaaagaa 385 Query: 1047 aatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaagtaccgag 1106 |||||||| |||||||||| |||||||||||||||| ||||||||||||| | | ||| Sbjct: 386 aatgatgaagttttcattaagctgggttctgacaaggataagaagaaggaaaatgctgag 445 Query: 1107 cgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggga 1166 || ||||| |||||||||||||| | ||||||||||||||||| || ||||| || ||| Sbjct: 446 cgtgatgagcgtgccaagaagtcggtgagcatcaacgagttcctgaaacctgctgaagga 505 Query: 1167 gagcggtactacggcggccgtgggcgtgggaggggccg 1204 || ||||||||||||||||||| ||||| |||||||| Sbjct: 506 gaaaggtactacggcggccgtggccgtggaaggggccg 543 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 659 gagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgc 718 ||||||||||||||||||||| |||||||| | |||| | | |||||| |||||||| || Sbjct: 1 gagaaactatgagcgccacagcgggactggccatggctatgagatgaagcgtgatggcgc 60 Query: 719 aggccgtgggaactggggatcttccactgatga 751 ||| |||||||||||||| || |||||||||| Sbjct: 61 agggcgtgggaactggggcactgccactgatga 93
>dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B03, full insert sequence Length = 501 Score = 220 bits (111), Expect = 1e-53 Identities = 195/223 (87%) Strand = Plus / Plus Query: 979 ctgaagaaagaaaggttgaagttgacaaggacctgcagtctctgcagccactgtctacca 1038 ||||||| || |||||||| || || ||||||||||||||| |||||||||| ||||||| Sbjct: 13 ctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccactttctacca 72 Query: 1039 agaaagccaatgatgagattttcattaaattgggttctgacaaggagaagaagaaggaaa 1098 |||||| |||||||| ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 73 agaaaggaaatgatgaaattttcattaagctgggttctgacaaggataagaagaaggaaa 132 Query: 1099 gtaccgagcgcgatgaacgtgccaagaagtctcttagcatcaacgagttcctcaagcctg 1158 | | ||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||| Sbjct: 133 atgctgagcgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctg 192 Query: 1159 ccgagggagagcggtactacggcggccgtgggcgtgggagggg 1201 | || ||||| ||||||| ||||||||||| ||||| ||||| Sbjct: 193 cggaaggagaaaggtactatggcggccgtggtcgtggaagggg 235 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 400 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 457
>ref|NM_001062674.1| Oryza sativa (japonica cultivar-group) Os05g0533100 (Os05g0533100) mRNA, partial cds Length = 1090 Score = 180 bits (91), Expect = 1e-41 Identities = 258/314 (82%), Gaps = 6/314 (1%) Strand = Plus / Plus Query: 900 gaagaggataaggagatgactctagaggagtacgagaaaataagggaggaacagcggaaa 959 |||||||||||||| |||||||| ||||||| |||||| |||||||||| || ||||| Sbjct: 441 gaagaggataaggaaatgactcttgaggagtttgagaaattaagggaggagaagaggaaa 500 Query: 960 gcactactagcattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtct 1019 ||||| || | |||||||||||||| || ||||||||| |||||||||| || ||||| Sbjct: 501 gcacttctttctttgaagactgaagagaggaaggttgaaattgacaaggatttgaagtct 560 Query: 1020 ctgcagccactgtctaccaagaaagccaatgatgagattttcattaaattgggttctgac 1079 |||| ||||| || | ||||||| |||||||| ||||||| ||| |||| |||||| Sbjct: 561 atgcaaccactttccaataagaaagaaaatgatgaagttttcatcaaactgggatctgac 620 Query: 1080 aagga------gaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaagtctctt 1133 ||||| ||||||||| |||| | | || || ||||| ||||| ||||||||| | Sbjct: 621 aaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgctaagaagtctgtg 680 Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 ||||||||||||||||| || || || || |||||| ||||||| ||||||||||| ||| Sbjct: 681 agcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggccgtggtcgt 740 Query: 1194 gggaggggccgcgg 1207 || ||||||||||| Sbjct: 741 ggcaggggccgcgg 754 Score = 60.0 bits (30), Expect = 3e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 ||||||||||| || || ||||| ||||| | | |||||| ||||| ||| | || ||| Sbjct: 213 tatgagcgccatagcggcactggccgtgggtatgagatgaagcgtgagggttcggggcgt 272 Query: 726 gggaactggggatcttccactgatgaaggtcttgcacaggaaactg 771 |||||||||||| || ||||||||||| ||| || |||||||||| Sbjct: 273 gggaactggggaactaccactgatgaaattctcgcccaggaaactg 318
>dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G19, full insert sequence Length = 1091 Score = 172 bits (87), Expect = 3e-39 Identities = 257/314 (81%), Gaps = 6/314 (1%) Strand = Plus / Plus Query: 900 gaagaggataaggagatgactctagaggagtacgagaaaataagggaggaacagcggaaa 959 |||||||||||||| |||||||| ||||||| |||||| |||||||||| || ||||| Sbjct: 442 gaagaggataaggaaatgactcttgaggagtttgagaaattaagggaggagaagaggaaa 501 Query: 960 gcactactagcattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtct 1019 ||||| || | |||||||||||||| || ||||||||| ||||||| || || ||||| Sbjct: 502 gcacttctttctttgaagactgaagagaggaaggttgaaattgacaaagatttgaagtct 561 Query: 1020 ctgcagccactgtctaccaagaaagccaatgatgagattttcattaaattgggttctgac 1079 |||| ||||| || | ||||||| |||||||| ||||||| ||| |||| |||||| Sbjct: 562 atgcaaccactttccaataagaaagaaaatgatgaagttttcatcaaactgggatctgac 621 Query: 1080 aagga------gaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaagtctctt 1133 ||||| ||||||||| |||| | | || || ||||| ||||| ||||||||| | Sbjct: 622 aaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgctaagaagtctgtg 681 Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 ||||||||||||||||| || || || || |||||| ||||||| ||||||||||| ||| Sbjct: 682 agcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggccgtggtcgt 741 Query: 1194 gggaggggccgcgg 1207 || ||||||||||| Sbjct: 742 ggcaggggccgcgg 755 Score = 60.0 bits (30), Expect = 3e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 ||||||||||| || || ||||| ||||| | | |||||| ||||| ||| | || ||| Sbjct: 214 tatgagcgccatagcggcactggccgtgggtatgagatgaagcgtgagggttcggggcgt 273 Query: 726 gggaactggggatcttccactgatgaaggtcttgcacaggaaactg 771 |||||||||||| || ||||||||||| ||| || |||||||||| Sbjct: 274 gggaactggggaactaccactgatgaaattctcgcccaggaaactg 319
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 145 bits (73), Expect = 6e-31 Identities = 136/157 (86%) Strand = Plus / Minus Query: 910 aggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagcactactag 969 ||||||||||||| ||||||| |||||| ||||||||||| |||||||||| || || | Sbjct: 30089723 aggagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttg 30089664 Query: 970 cattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtctctgcagccac 1029 | || ||| ||||||| || |||||||| || || ||||||||||||||| ||||||||| Sbjct: 30089663 ctttcaaggctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccac 30089604 Query: 1030 tgtctaccaagaaagccaatgatgagattttcattaa 1066 | ||||||||||||| |||||||| ||||||||||| Sbjct: 30089603 tttctaccaagaaaggaaatgatgaaattttcattaa 30089567 Score = 127 bits (64), Expect = 1e-25 Identities = 142/168 (84%) Strand = Plus / Minus Query: 597 ggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccgcct 656 |||||||| |||||||| ||||| || |||| | ||| || || |||||||| ||||| Sbjct: 30091029 ggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccc 30090970 Query: 657 cggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggt 716 |||||||| ||||||||||||||||| ||||| ||||| | | |||||| ||||||||| Sbjct: 30090969 cggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggt 30090910 Query: 717 gcaggccgtgggaactggggatcttccactgatgaaggtcttgcacag 764 ||||| ||||||||||||||| || | |||||||| | |||||||||| Sbjct: 30090909 gcagggcgtgggaactggggaactgctactgatgaggctcttgcacag 30090862 Score = 81.8 bits (41), Expect = 7e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 412 caccatcacgtggaggatttggccgtggtgaacctggccgcggcagaggaggcggccggt 471 ||||||||||||||||||||||||||||||| | |||||| |||||||| || | | | Sbjct: 30091223 caccatcacgtggaggatttggccgtggtgagcgtggccgtggcagaggtggacggggat 30091164 Query: 472 acggccagaaccgtgactatggcagcgagaatacgaatggctaccagggaggttatggtg 531 | |||||||||||||| | ||| | || ||| | |||||||||||||| ||||| |||| Sbjct: 30091163 atggccagaaccgtgattttggtggagacaatgccaatggctaccagggtggttacggtg 30091104 Query: 532 g 532 | Sbjct: 30091103 g 30091103 Score = 75.8 bits (38), Expect = 4e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 1070 gggttctgacaaggagaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaag 1127 ||||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||| Sbjct: 30089478 gggttctgacaaggataagaagaaggaaaatgctgagcgcgatgagcgtgccaagaag 30089421 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 30088869 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 30088812 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 |||||||| |||||||| |||||||| || ||||| ||||||| ||||||||||| ||| Sbjct: 30089101 agcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggccgtggtcgt 30089042 Query: 1194 gggagggg 1201 || ||||| Sbjct: 30089041 ggaagggg 30089034 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 188 cgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacgacgatccctc 247 ||||||| || |||||||| |||||| |||| || || |||||||||||||| ||||| Sbjct: 30091820 cgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctc 30091761 Query: 248 gcagctgcttgctgcggcgcaggccgcggcg 278 ||||||||| || ||||| |||||||||| Sbjct: 30091760 gcagctgctggccgcggccgcggccgcggcg 30091730 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 807 gctgagaagcagggtgagcaggatgatgctcc 838 |||||||| ||||||||||||||||||||||| Sbjct: 30090734 gctgagaaacagggtgagcaggatgatgctcc 30090703 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 699 gggatgaaacgtgatggtgcaggccgtgggaactgggga 737 |||||||||||||| || ||||||||||| ||||||||| Sbjct: 23739789 gggatgaaacgtgaaggcgcaggccgtggtaactgggga 23739751 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataagg 912 ||||| ||||||||||| ||||| || ||||| ||||||||||||| Sbjct: 30090683 aaggagggtgctgcaaatgaggaagaagagaaggaagaggataagg 30090638 Score = 46.1 bits (23), Expect = 0.40 Identities = 51/60 (85%), Gaps = 4/60 (6%) Strand = Plus / Minus Query: 1459 tttgtataccggagttgatcgtcgggattagcctctagctagttttgtaggctagctttt 1518 ||||||||||||||||| | ||| | ||||||||||| |||||||||||||||||| Sbjct: 30088772 tttgtataccggagttgcttgtcagaattagcctctaa----ttttgtaggctagctttt 30088717 Score = 44.1 bits (22), Expect = 1.6 Identities = 57/68 (83%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 312 gcgcctgctgggaaggcggcccagaccg---gggcggcagccaagttgccgaccaaaccc 368 ||||| |||||||||||||||||| ||| ||| || |||||||| || ||||| ||| Sbjct: 30091690 gcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagccc 30091631 Query: 369 gctccccc 376 |||||||| Sbjct: 30091630 gctccccc 30091623
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 145 bits (73), Expect = 6e-31 Identities = 136/157 (86%) Strand = Plus / Minus Query: 910 aggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagcactactag 969 ||||||||||||| ||||||| |||||| ||||||||||| |||||||||| || || | Sbjct: 85713 aggagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttg 85654 Query: 970 cattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtctctgcagccac 1029 | || ||| ||||||| || |||||||| || || ||||||||||||||| ||||||||| Sbjct: 85653 ctttcaaggctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccac 85594 Query: 1030 tgtctaccaagaaagccaatgatgagattttcattaa 1066 | ||||||||||||| |||||||| ||||||||||| Sbjct: 85593 tttctaccaagaaaggaaatgatgaaattttcattaa 85557 Score = 127 bits (64), Expect = 1e-25 Identities = 142/168 (84%) Strand = Plus / Minus Query: 597 ggaggtagacgtggtggttaccgcaacagtgagtttggtgacgactctgagagaccgcct 656 |||||||| |||||||| ||||| || |||| | ||| || || |||||||| ||||| Sbjct: 87019 ggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccc 86960 Query: 657 cggagaaactatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggt 716 |||||||| ||||||||||||||||| ||||| ||||| | | |||||| ||||||||| Sbjct: 86959 cggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggt 86900 Query: 717 gcaggccgtgggaactggggatcttccactgatgaaggtcttgcacag 764 ||||| ||||||||||||||| || | |||||||| | |||||||||| Sbjct: 86899 gcagggcgtgggaactggggaactgctactgatgaggctcttgcacag 86852 Score = 81.8 bits (41), Expect = 7e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 412 caccatcacgtggaggatttggccgtggtgaacctggccgcggcagaggaggcggccggt 471 ||||||||||||||||||||||||||||||| | |||||| |||||||| || | | | Sbjct: 87213 caccatcacgtggaggatttggccgtggtgagcgtggccgtggcagaggtggacggggat 87154 Query: 472 acggccagaaccgtgactatggcagcgagaatacgaatggctaccagggaggttatggtg 531 | |||||||||||||| | ||| | || ||| | |||||||||||||| ||||| |||| Sbjct: 87153 atggccagaaccgtgattttggtggagacaatgccaatggctaccagggtggttacggtg 87094 Query: 532 g 532 | Sbjct: 87093 g 87093 Score = 75.8 bits (38), Expect = 4e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 1070 gggttctgacaaggagaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaag 1127 ||||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||| Sbjct: 85468 gggttctgacaaggataagaagaaggaaaatgctgagcgcgatgagcgtgccaagaag 85411 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1366 cctttaaattttgcccgacgttggattattgtgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||| |||| || || ||||||||||||||||||||||||||| Sbjct: 84859 cctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatg 84802 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 |||||||| |||||||| |||||||| || ||||| ||||||| ||||||||||| ||| Sbjct: 85091 agcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggccgtggtcgt 85032 Query: 1194 gggagggg 1201 || ||||| Sbjct: 85031 ggaagggg 85024 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 188 cgccatgtcgtccctcaaccagttcgatctccttggagccgacgacaacgacgatccctc 247 ||||||| || |||||||| |||||| |||| || || |||||||||||||| ||||| Sbjct: 87810 cgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctc 87751 Query: 248 gcagctgcttgctgcggcgcaggccgcggcg 278 ||||||||| || ||||| |||||||||| Sbjct: 87750 gcagctgctggccgcggccgcggccgcggcg 87720 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 807 gctgagaagcagggtgagcaggatgatgctcc 838 |||||||| ||||||||||||||||||||||| Sbjct: 86724 gctgagaaacagggtgagcaggatgatgctcc 86693 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 867 aaggatggtgctgcaaaggaggaggaggagaatgaagaggataagg 912 ||||| ||||||||||| ||||| || ||||| ||||||||||||| Sbjct: 86673 aaggagggtgctgcaaatgaggaagaagagaaggaagaggataagg 86628 Score = 46.1 bits (23), Expect = 0.40 Identities = 51/60 (85%), Gaps = 4/60 (6%) Strand = Plus / Minus Query: 1459 tttgtataccggagttgatcgtcgggattagcctctagctagttttgtaggctagctttt 1518 ||||||||||||||||| | ||| | ||||||||||| |||||||||||||||||| Sbjct: 84762 tttgtataccggagttgcttgtcagaattagcctctaa----ttttgtaggctagctttt 84707 Score = 44.1 bits (22), Expect = 1.6 Identities = 57/68 (83%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 312 gcgcctgctgggaaggcggcccagaccg---gggcggcagccaagttgccgaccaaaccc 368 ||||| |||||||||||||||||| ||| ||| || |||||||| || ||||| ||| Sbjct: 87680 gcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagccc 87621 Query: 369 gctccccc 376 |||||||| Sbjct: 87620 gctccccc 87613
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 83.8 bits (42), Expect = 2e-12 Identities = 126/154 (81%) Strand = Plus / Plus Query: 910 aggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagcactactag 969 |||| |||||||| ||||||| |||||| |||||||||| || |||||||||| || Sbjct: 110402 aggaaatgactcttgaggagtttgagaaattaagggaggagaagaggaaagcacttcttt 110461 Query: 970 cattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtctctgcagccac 1029 | |||||||||||||| || ||||||||| |||||||||| || ||||| |||| |||| Sbjct: 110462 ctttgaagactgaagagaggaaggttgaaattgacaaggatttgaagtctatgcaaccac 110521 Query: 1030 tgtctaccaagaaagccaatgatgagattttcat 1063 | || | ||||||| |||||||| ||||||| Sbjct: 110522 tttccaataagaaagaaaatgatgaagttttcat 110555 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 ||||||||||||||||| || || || || |||||| ||||||| ||||||||||| ||| Sbjct: 111046 agcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggccgtggtcgt 111105 Query: 1194 gggaggggccgcgg 1207 || ||||||||||| Sbjct: 111106 ggcaggggccgcgg 111119 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 ||||||||||| || || ||||| ||||| | | |||||| ||||| ||| | || ||| Sbjct: 109387 tatgagcgccatagcggcactggccgtgggtatgagatgaagcgtgagggttcggggcgt 109446 Query: 726 gggaactggggatcttccactgatgaa 752 |||||||||||| || ||||||||||| Sbjct: 109447 gggaactggggaactaccactgatgaa 109473 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 cgacgacaacgacgatccctcgcagctgct 256 ||||||||||||||| ||| |||||||||| Sbjct: 108670 cgacgacaacgacgaccccgcgcagctgct 108699
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 83.8 bits (42), Expect = 2e-12 Identities = 126/154 (81%) Strand = Plus / Plus Query: 910 aggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagcactactag 969 |||| |||||||| ||||||| |||||| |||||||||| || |||||||||| || Sbjct: 26259354 aggaaatgactcttgaggagtttgagaaattaagggaggagaagaggaaagcacttcttt 26259413 Query: 970 cattgaagactgaagaaagaaaggttgaagttgacaaggacctgcagtctctgcagccac 1029 | |||||||||||||| || ||||||||| |||||||||| || ||||| |||| |||| Sbjct: 26259414 ctttgaagactgaagagaggaaggttgaaattgacaaggatttgaagtctatgcaaccac 26259473 Query: 1030 tgtctaccaagaaagccaatgatgagattttcat 1063 | || | ||||||| |||||||| ||||||| Sbjct: 26259474 tttccaataagaaagaaaatgatgaagttttcat 26259507 Score = 75.8 bits (38), Expect = 4e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1134 agcatcaacgagttcctcaagcctgccgagggagagcggtactacggcggccgtgggcgt 1193 ||||||||||||||||| || || || || |||||| ||||||| ||||||||||| ||| Sbjct: 26259998 agcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggccgtggtcgt 26260057 Query: 1194 gggaggggccgcgg 1207 || ||||||||||| Sbjct: 26260058 ggcaggggccgcgg 26260071 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 ||||||||||| || || ||||| ||||| | | |||||| ||||| ||| | || ||| Sbjct: 26258339 tatgagcgccatagcggcactggccgtgggtatgagatgaagcgtgagggttcggggcgt 26258398 Query: 726 gggaactggggatcttccactgatgaa 752 |||||||||||| || ||||||||||| Sbjct: 26258399 gggaactggggaactaccactgatgaa 26258425 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 cgacgacaacgacgatccctcgcagctgct 256 ||||||||||||||| ||| |||||||||| Sbjct: 26257622 cgacgacaacgacgaccccgcgcagctgct 26257651 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgccgccgccatgtcgtc 199 ||||||||||||||||||||| Sbjct: 23264916 cgccgccgccgccatgtcgtc 23264896 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 gccccccatcctcgccgccgc 187 ||||||||||||||||||||| Sbjct: 28603851 gccccccatcctcgccgccgc 28603871
>gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA, partial cds Length = 890 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1057 ttttcattaaattgggttctgacaaggagaagaagaaggaa 1097 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 503 ttttcattaaattgggttctgacaaggataagaagaaggaa 543 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 909 aaggagatgactctagaggagtacgagaaa 938 |||||||||||||| || |||||||||||| Sbjct: 355 aaggagatgactcttgaagagtacgagaaa 384
>gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA, partial cds Length = 925 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 1057 ttttcattaaattgggttctgacaaggagaagaagaaggaa 1097 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 471 ttttcattaaattgggttctgacaaggataagaagaaggaa 511 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 909 aaggagatgactctagaggagtacgagaaa 938 |||||||||||||| || |||||||||||| Sbjct: 323 aaggagatgactcttgaagagtacgagaaa 352
>emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene) Length = 1300 Score = 65.9 bits (33), Expect = 4e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1057 ttttcattaaattgggttctgacaaggagaagaagaaggaa 1097 ||||||| |||||||||||||||||||| |||||||||||| Sbjct: 877 ttttcatcaaattgggttctgacaaggataagaagaaggaa 917
>dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N19, full insert sequence Length = 1556 Score = 60.0 bits (30), Expect = 3e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 678 agtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgtgggaactgggga 737 ||||| || ||||| || || |||||||||||||| || ||||||||||| ||||||||| Sbjct: 721 agtggcacaggtcgagggcatgggatgaaacgtgaaggcgcaggccgtggtaactgggga 780 Query: 738 tcttccactgatgaaggtcttgcacaggaa 767 || |||||||||| ||||| |||||| Sbjct: 781 actgtgactgatgaagcccttgcccaggaa 810 Score = 48.1 bits (24), Expect = 0.10 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1069 tgggttctgacaaggagaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaagt 1128 |||||||||||||||| || ||||| |||| | || | |||||||| ||| ||||| Sbjct: 1109 tgggttctgacaaggacaaaaagaaagaaaatgttgaaagagatgaacgcaccaggaagt 1168 Query: 1129 ctcttagcatcaacgagttcctcaagcc 1156 ||||||||||||| || ||||| ||||| Sbjct: 1169 ctcttagcatcaatgaattcctgaagcc 1196
>gb|AY104818.1| Zea mays PCO063451 mRNA sequence Length = 1163 Score = 60.0 bits (30), Expect = 3e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 |||||||||||||| || || || |||||| | |||||||| ||||| || || || ||| Sbjct: 153 tatgagcgccacagcggcacaggccgtggctacgggatgaagcgtgaaggggctgggcgt 212 Query: 726 gggaactggggatcttccactgatgaaggtcttgcacaggaaactg 771 || || |||||| || | ||||||||||| |||| |||||| |||| Sbjct: 213 ggaaattggggaactgcaactgatgaaggccttgaacaggacactg 258
>ref|NM_001050037.1| Oryza sativa (japonica cultivar-group) Os01g0603000 (Os01g0603000) mRNA, complete cds Length = 1555 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 699 gggatgaaacgtgatggtgcaggccgtgggaactggggatcttccactgatgaaggtctt 758 |||||||||||||| || ||||||||||| ||||||||| || |||||||||| ||| Sbjct: 741 gggatgaaacgtgaaggcgcaggccgtggtaactggggaactgtgactgatgaagccctt 800 Query: 759 gcacaggaa 767 || |||||| Sbjct: 801 gcccaggaa 809 Score = 48.1 bits (24), Expect = 0.10 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1069 tgggttctgacaaggagaagaagaaggaaagtaccgagcgcgatgaacgtgccaagaagt 1128 |||||||||||||||| || ||||| |||| | || | |||||||| ||| ||||| Sbjct: 1108 tgggttctgacaaggacaaaaagaaagaaaatgttgaaagagatgaacgcaccaggaagt 1167 Query: 1129 ctcttagcatcaacgagttcctcaagcc 1156 ||||||||||||| || ||||| ||||| Sbjct: 1168 ctcttagcatcaatgaattcctgaagcc 1195
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 699 gggatgaaacgtgatggtgcaggccgtgggaactgggga 737 |||||||||||||| || ||||||||||| ||||||||| Sbjct: 117493 gggatgaaacgtgaaggcgcaggccgtggtaactgggga 117455
>dbj|D17786.1|RICKN6922 Oryza sativa KN69 mRNA for ubiquitin-conjugating enzyme, partial CDS Length = 311 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 1397 tgtcacggttaatcggaacaaataatg 1423 ||||||||||||||||||||||||||| Sbjct: 64 tgtcacggttaatcggaacaaataatg 38
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Minus Query: 699 gggatgaaacgtgatggtgcaggccgtgggaactgggga 737 |||||||||||||| || ||||||||||| ||||||||| Sbjct: 20374 gggatgaaacgtgaaggcgcaggccgtggtaactgggga 20336
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 169 cccccatcctcgccgccgccgccatg 194 |||||||||||||||||||||||||| Sbjct: 4447810 cccccatcctcgccgccgccgccatg 4447835 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 ccccatcctcgccgccgccgccatg 194 |||||||| |||||||||||||||| Sbjct: 2134002 ccccatccccgccgccgccgccatg 2134026
>gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, complete sequence Length = 209808 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||||| |||||||| |||||| Sbjct: 157780 aaaggaggaggaggagaaagaagaggagaaggag 157813
>gb|AC114533.17| Mus musculus chromosome 1, clone RP24-255G23, complete sequence Length = 147505 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 |||||||||||||||||||||||||| Sbjct: 53276 aaggaggaggaggagaatgaagagga 53251
>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence Length = 214419 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 |||||||||||||||||||||||||| Sbjct: 77414 aaggaggaggaggagaatgaagagga 77439
>ref|XR_013039.1| PREDICTED: Macaca mulatta similar to POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) (LOC706835), mRNA Length = 4474 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||| ||||||||||| |||||| Sbjct: 1673 aggaggaggaggaggatgaagaggatgaggaga 1641
>gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, complete sequence Length = 173914 Score = 50.1 bits (25), Expect = 0.025 Identities = 34/37 (91%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggagatgac 919 |||||||||||||||| |||||||| |||||||||| Sbjct: 79981 aggaggaggaggagaaggaagaggaggaggagatgac 79945
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||| |||||||| ||||||| Sbjct: 79331 aggaggaggaggagaaggaagaggagaaggaga 79363
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||| |||||||| ||||||| Sbjct: 120946 aggaggaggaggagaaggaagaggagaaggaga 120978
>gb|AF110228.1| Spinacia oleracea nuclear RNA binding protein A (RggA) mRNA, complete cds Length = 1464 Score = 50.1 bits (25), Expect = 0.025 Identities = 40/45 (88%) Strand = Plus / Plus Query: 966 ctagcattgaagactgaagaaagaaaggttgaagttgacaaggac 1010 |||||||||||| |||| ||||| |||||||| || ||||||||| Sbjct: 897 ctagcattgaaggctgaggaaaggaaggttgatgtggacaaggac 941
>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence Length = 248953 Score = 50.1 bits (25), Expect = 0.025 Identities = 31/33 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||| | |||||||||||||||| Sbjct: 26205 aggaggaggaggaggaggaagaggataaggaga 26237
>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete sequence Length = 178544 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 ||||||||||||||||||||||||| Sbjct: 167913 aggaggaggaggagaatgaagagga 167937
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 255 cttgctgcggcgcaggccgcggcg 278 |||||||||||||||||||||||| Sbjct: 2416778 cttgctgcggcgcaggccgcggcg 2416801
>emb|CT030163.13| Mouse DNA sequence from clone RP23-438L8 on chromosome 13, complete sequence Length = 157248 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 132639 aggaggaggaggagaaggaagaggagaaggag 132608 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 132711 aggaggaggaggagaaggaagaggagaaggag 132680
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagaggataaggagat 916 ||||||||||||||||||||||| ||| |||| Sbjct: 45960 gaggaggaggagaatgaagaggagaagaagat 45991
>gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosome 12, complete sequence Length = 168895 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 103887 aggaggaggaggagaaggaagaggagaaggag 103856 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 104015 aggaggaggaggagaaggaagaggagaaggag 103984
>gb|AY560385.1| Tagetes minuta thermoinhibition-associated THB-4 protein mRNA, partial cds Length = 345 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 975 aagactgaagaaagaaaggttgaagttgacaa 1006 ||||||||||||||||| || ||||||||||| Sbjct: 109 aagactgaagaaagaaaagtggaagttgacaa 140
>ref|XM_858640.1| PREDICTED: Canis familiaris hypothetical protein LOC609143 (LOC609143), mRNA Length = 258 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 131 aggaggaggaggagaaggaagaggagaaggag 162
>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence Length = 184288 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 873 ggtgctgcaaaggaggaggaggag 896 |||||||||||||||||||||||| Sbjct: 25664 ggtgctgcaaaggaggaggaggag 25641
>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence Length = 117628 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 547 ctggaggcggggacggggagagag 570 |||||||||||||||||||||||| Sbjct: 111889 ctggaggcggggacggggagagag 111866
>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a novel gene and a CpG island, complete sequence Length = 129950 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 108955 aggaggaggaggagaaggaagaggagaaggag 108986
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||| | ||||||||||||||| Sbjct: 75873 aggaggaggaggaggaagaagaggataaggag 75904
>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence Length = 164201 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| |||||||| |||||| Sbjct: 50036 aggaggaggaggagaaggaagaggagaaggag 50005 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaaga 904 |||||||||||||||||||||| Sbjct: 49928 aggaggaggaggagaatgaaga 49907
>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence Length = 176888 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 873 ggtgctgcaaaggaggaggaggag 896 |||||||||||||||||||||||| Sbjct: 172617 ggtgctgcaaaggaggaggaggag 172594
>ref|NM_133966.2| Mus musculus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf5l), mRNA Length = 2893 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 1087 ggaggaggaggagaatgaagaagataa 1113
>ref|XM_001210274.1| Aspergillus terreus NIH2624 predicted protein (ATEG_00188) mRNA, complete cds Length = 5313 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 171 cccatcctcgccgccgccgccat 193 ||||||||||||||||||||||| Sbjct: 450 cccatcctcgccgccgccgccat 428
>ref|NM_001063018.1| Oryza sativa (japonica cultivar-group) Os05g0589600 (Os05g0589600) mRNA, complete cds Length = 1696 Score = 46.1 bits (23), Expect = 0.40 Identities = 86/107 (80%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagca 962 |||||||||||||||||| | ||||| || |||||| | |||||| |||||||||| Sbjct: 949 gaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagct 1008 Query: 963 ctactagcattgaagactgaagaaagaaaggttgaagttgacaagga 1009 | || ||| ||||| |||| || || || |||||||| |||||||| Sbjct: 1009 ttgcttgcactgaaggctgaggagaggaaagttgaagtcgacaagga 1055 Score = 44.1 bits (22), Expect = 1.6 Identities = 82/102 (80%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 |||||||||||||| || ||||| |||||| | | | |||| ||||| || | ||||| Sbjct: 715 tatgagcgccacagcggcactggccgtggctatgagttgaagcgtgaggggtctggccgc 774 Query: 726 gggaactggggatcttccactgatgaaggtcttgcacaggaa 767 || || |||||| || ||| |||||||| |||||||||||| Sbjct: 775 ggcaattggggaactgtcaccgatgaaggccttgcacaggaa 816
>gb|BT028975.1| Arabidopsis thaliana unknown protein (At2g43960) mRNA, complete cds Length = 1329 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagagga 907 ||||||||||||||||||||||| Sbjct: 253 gaggaggaggagaatgaagagga 231
>emb|CU075719.1| Xenopus tropicalis finished cDNA, clone TNeu059i19 Length = 1126 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 878 tgcaaaggaggaggaggagaatgaagaggat 908 |||| |||||||||||||| ||||||||||| Sbjct: 454 tgcagaggaggaggaggaggatgaagaggat 484
>gb|AC080157.26| Rattus norvegicus NOVECTOR RP32-475K22 () complete sequence Length = 167705 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 3104 aaaggaggaggaggagaaggaagagga 3130
>ref|XM_001071212.1| PREDICTED: Rattus norvegicus similar to Discs large homolog 5 (Placenta and prostate DLG) (Discs large protein P-dlg) (LOC684605), mRNA Length = 666 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 570 aaaggaggaggaggagaaagaagagga 596
>ref|XM_001079633.1| PREDICTED: Rattus norvegicus similar to Discs large homolog 5 (Placenta and prostate DLG) (Discs large protein P-dlg) (LOC691788), mRNA Length = 666 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 570 aaaggaggaggaggagaaagaagagga 596
>ref|XR_009421.1| PREDICTED: Rattus norvegicus hypothetical protein LOC688026 (LOC688026), mRNA Length = 366 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || ||||| ||||||| Sbjct: 12 aaaggaggaggaggagaaggaggaggagaaggaga 46
>ref|XM_001068516.1| PREDICTED: Rattus norvegicus hypothetical protein LOC688837 (LOC688837), mRNA Length = 963 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || ||||| ||||||| Sbjct: 54 aaaggaggaggaggagaaggaggaggagaaggaga 88
>ref|XM_001068568.1| PREDICTED: Rattus norvegicus similar to X transporter protein 3 similar 1 (LOC684022), mRNA Length = 402 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggagatg 917 ||||||| ||||||||||||||||| |||||||| Sbjct: 359 aggaggacgaggagaatgaagaggaggaggagatg 393
>ref|XM_001072201.1| PREDICTED: Rattus norvegicus similar to X transporter protein 3 similar 1 (LOC689833), mRNA Length = 402 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataaggagatg 917 ||||||| ||||||||||||||||| |||||||| Sbjct: 359 aggaggacgaggagaatgaagaggaggaggagatg 393
>gb|AC186761.1| Pongo pygmaeus abelii chromosome UNK clone CH276-23H12, complete sequence Length = 194996 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 38687 aaaggaggaggaggagaaggaagagga 38713
>ref|NM_117785.2| Arabidopsis thaliana RNA binding (AT4G16830) mRNA, complete cds Length = 1536 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 846 gaggataaggaaatgactcttgatgagtatgagaaaata 884
>ref|NM_129958.2| Arabidopsis thaliana RNA binding (AT2G43960) mRNA, complete cds Length = 1481 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagagga 907 ||||||||||||||||||||||| Sbjct: 258 gaggaggaggagaatgaagagga 236
>gb|BC013550.1| Mus musculus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone MGC:19341 IMAGE:4222283), complete cds Length = 2900 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 1087 ggaggaggaggagaatgaagaagataa 1113
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagaggataaggaga 915 |||||||||||||| |||||||| ||||||| Sbjct: 141081 gaggaggaggagaaggaagaggagaaggaga 141051
>gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosome 18, complete sequence Length = 204727 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||| |||||||| |||||| Sbjct: 36586 ggaggaggaggagaaggaagaggagaaggag 36616
>gb|AC144732.3| Mus musculus BAC clone RP24-244I18 from chromosome 15, complete sequence Length = 151944 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggata 909 |||||||||||||||| |||||||||| Sbjct: 37094 aggaggaggaggagaaagaagaggata 37120
>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence Length = 166966 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 150637 aaaggaggaggaggagaaggaagagga 150611
>gb|AC125398.4| Mus musculus BAC clone RP24-217G23 from chromosome 18, complete sequence Length = 166948 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 884 ggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||| |||||||| |||||| Sbjct: 26494 ggaggaggaggagaaggaagaggagaaggag 26464
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || ||||| ||||||| Sbjct: 12521 aaaggaggaggaggagaaggaggaggagaaggaga 12555
>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence Length = 187995 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 74680 aaaggaggaggaggagaaggaagagga 74706
>gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, complete sequence Length = 208101 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 171049 aaaggaggaggaggagaaagaagagga 171075
>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence Length = 203014 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || |||||| |||||| Sbjct: 177661 aaaggaggaggaggagaaagaggaggatgaggaga 177627
>gb|AC159140.10| Mus musculus chromosome 7, clone RP24-84I4, complete sequence Length = 202318 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 130631 aaaggaggaggaggagaaggaagagga 130657
>dbj|AB229924.1| Aspergillus oryzae cDNA, contig sequence: AoEST6810 Length = 274 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1419 taatgtgtttttcttttctttcagtgt 1445 |||||| |||||||||||||||||||| Sbjct: 83 taatgtctttttcttttctttcagtgt 109
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1419 taatgtgtttttcttttctttcagtgt 1445 |||||| |||||||||||||||||||| Sbjct: 1052646 taatgtctttttcttttctttcagtgt 1052620
>gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog (At4g16830/dl4440w) mRNA, complete cds Length = 1068 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 664 gaggataaggaaatgactcttgatgagtatgagaaaata 702
>gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207222 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || ||||| ||||||| Sbjct: 169392 aaaggaggaggaggagaaggaggaggagaaggaga 169426
>gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-like protein (At4g16830) mRNA, complete cds Length = 1099 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 664 gaggataaggaaatgactcttgatgagtatgagaaaata 702
>gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen homolog (At4g16830) mRNA, complete cds Length = 1443 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 820 gaggataaggaaatgactcttgatgagtatgagaaaata 858
>dbj|AK154832.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630108G12 product:TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, full insert sequence Length = 1884 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 1167 ggaggaggaggagaatgaagaagataa 1193
>gb|AC159897.2| Mus musculus BAC clone RP23-191E14 from chromosome 12, complete sequence Length = 216485 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 12537 aaaggaggaggaggagaaagaagagga 12563
>gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, complete cds Length = 1431 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 827 gaggataaggaaatgactcttgatgagtatgagaaaata 865
>dbj|AK003477.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110005N04 product:similar to 3' of PCAF ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION FACTOR) [Homo sapiens], full insert sequence Length = 2010 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 213 ggaggaggaggagaatgaagaagataa 239
>emb|X97907.1|VFPTF1 V.faba mRNA for putative transciption factor (1556bp) Length = 1556 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 975 aagactgaagaaagaaaggttga 997 ||||||||||||||||||||||| Sbjct: 974 aagactgaagaaagaaaggttga 996
>dbj|AK012596.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700091C21 product:similar to PUTATIVE RNA BINDING PROTEIN [Homo sapiens], full insert sequence Length = 1276 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 179 cgccgccgccgccatgtcgtccctcaaccag 209 ||||||||||||| |||||||||||| |||| Sbjct: 47 cgccgccgccgccctgtcgtccctcagccag 17
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagagga 907 ||||||||||||||||||||||| Sbjct: 34802 gaggaggaggagaatgaagagga 34824
>dbj|AK033477.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030217F08 product:PCAF ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION FACTOR) homolog [Homo sapiens], full insert sequence Length = 2913 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 1115 ggaggaggaggagaatgaagaagataa 1141
>dbj|AK089463.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730035H20 product:PCAF ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION FACTOR) homolog [Homo sapiens], full insert sequence Length = 1884 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 884 ggaggaggaggagaatgaagaggataa 910 ||||||||||||||||||||| ||||| Sbjct: 1167 ggaggaggaggagaatgaagaagataa 1193
>emb|CR705362.2|CNS0G77I Tetraodon nigroviridis full-length cDNA Length = 698 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1077 gacaaggagaagaagaaggaaag 1099 ||||||||||||||||||||||| Sbjct: 430 gacaaggagaagaagaaggaaag 452
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 166 agccccccatcctcgccgccgccgcca 192 |||||||||||| |||||||||||||| Sbjct: 20118501 agccccccatccccgccgccgccgcca 20118475 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 23315554 tcctcgccgccgccgccatgtc 23315533 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1419 taatgtgtttttcttttcttt 1439 ||||||||||||||||||||| Sbjct: 9804421 taatgtgtttttcttttcttt 9804401 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1419 taatgtgtttttcttttcttt 1439 ||||||||||||||||||||| Sbjct: 19952546 taatgtgtttttcttttcttt 19952566
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagag 905 ||||||||||||||||||||||| Sbjct: 34241342 aggaggaggaggagaatgaagag 34241320
>ref|XM_690507.1| PREDICTED: Danio rerio similar to Protein kinase C-binding protein NELL2 precursor (NEL-like protein 2) (Nel-related protein 2) (LOC567216), partial mRNA Length = 2585 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1323 tgtgctgtgctgtcctgaacgccatcctcgt 1353 ||||||||||||||||||| || |||||||| Sbjct: 1784 tgtgctgtgctgtcctgaatgcgatcctcgt 1814
>emb|AL035659.22|HS979N1 Human DNA sequence from clone RP5-979N1 on chromosome 22q13.1-13.32, complete sequence Length = 102151 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1195 ggaggggccgcggcgagggccgtggag 1221 |||||||||||||||||||||| |||| Sbjct: 5835 ggaggggccgcggcgagggccggggag 5861
>emb|CR786571.6| Zebrafish DNA sequence from clone DKEY-234L24 in linkage group 4, complete sequence Length = 182259 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1323 tgtgctgtgctgtcctgaacgccatcctcgt 1353 ||||||||||||||||||| || |||||||| Sbjct: 122155 tgtgctgtgctgtcctgaatgcgatcctcgt 122125
>gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete sequence Length = 1474 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 823 gaggataaggaaatgactcttgatgagtatgagaaaata 861
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || ||||| ||||||| Sbjct: 95458 aaaggaggaggaggagaaggaggaggagaaggaga 95424
>gb|AC159025.3| Pan troglodytes BAC clone CH251-489N6 from chromosome unknown, complete sequence Length = 181817 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 31429 aaaggaggaggaggagaaagaagagga 31403
>gb|AC167140.1| Mus musculus BAC clone RP24-482O17 from chromosome 14, complete sequence Length = 143541 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggataagga 913 ||||||||||||| || |||||||||||||| Sbjct: 31527 aggaggaggaggataaggaagaggataagga 31557
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagag 905 ||||||||||||||||||||||| Sbjct: 114682 aggaggaggaggagaatgaagag 114660
>gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y, complete sequence Length = 174420 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || |||||| |||||| Sbjct: 74940 aaaggaggaggaggagaaagaggaggatgaggaga 74906
>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences Length = 198405 Score = 46.1 bits (23), Expect = 0.40 Identities = 32/35 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggaga 915 |||||||||||||||||| || |||||| |||||| Sbjct: 166977 aaaggaggaggaggagaaagaggaggatgaggaga 166943
>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 Length = 88398 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 910 aggagatgactctagaggagtacgagaaaat 940 |||||||||||||||| ||||| |||||||| Sbjct: 18121 aggagatgactctagaagagtatgagaaaat 18091
>dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L01, full insert sequence Length = 1699 Score = 46.1 bits (23), Expect = 0.40 Identities = 86/107 (80%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaataagggaggaacagcggaaagca 962 |||||||||||||||||| | ||||| || |||||| | |||||| |||||||||| Sbjct: 951 gaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagct 1010 Query: 963 ctactagcattgaagactgaagaaagaaaggttgaagttgacaagga 1009 | || ||| ||||| |||| || || || |||||||| |||||||| Sbjct: 1011 ttgcttgcactgaaggctgaggagaggaaagttgaagtcgacaagga 1057 Score = 44.1 bits (22), Expect = 1.6 Identities = 82/102 (80%) Strand = Plus / Plus Query: 666 tatgagcgccacagtgggactggtcgtggccaggggatgaaacgtgatggtgcaggccgt 725 |||||||||||||| || ||||| |||||| | | | |||| ||||| || | ||||| Sbjct: 717 tatgagcgccacagcggcactggccgtggctatgagttgaagcgtgaggggtctggccgc 776 Query: 726 gggaactggggatcttccactgatgaaggtcttgcacaggaa 767 || || |||||| || ||| |||||||| |||||||||||| Sbjct: 777 ggcaattggggaactgtcaccgatgaaggccttgcacaggaa 818
>emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 46.1 bits (23), Expect = 0.40 Identities = 35/39 (89%) Strand = Plus / Plus Query: 903 gaggataaggagatgactctagaggagtacgagaaaata 941 ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 662 gaggataaggaaatgactcttgatgagtatgagaaaata 700
>gb|AY954837.1| Arabidopsis thaliana hypothetical protein (At2g43960) gene, complete cds Length = 1329 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagagga 907 ||||||||||||||||||||||| Sbjct: 253 gaggaggaggagaatgaagagga 231
>gb|AC138309.4| Mus musculus BAC clone RP23-250M10 from 13, complete sequence Length = 180449 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagaggataaggaga 915 |||||||||||||| |||||||| ||||||| Sbjct: 77870 gaggaggaggagaaggaagaggagaaggaga 77840
>emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chromosome 13, complete sequence Length = 120944 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataagg 912 ||||||||||||||||| |||||||| |||| Sbjct: 105777 aaggaggaggaggagaaggaagaggagaagg 105807
>emb|BX005042.5| Zebrafish DNA sequence from clone CH211-119F9 in linkage group 2, complete sequence Length = 173926 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 88583 aaaggaggaggaggagaaggaagagga 88557
>emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chromosome 2, complete sequence Length = 227422 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 45722 aaaggaggaggaggagaaggaagagga 45696
>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence Length = 187385 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 103191 aaaggaggaggaggagaaggaagagga 103165
>gb|AC121792.3| Mus musculus BAC clone RP23-404J7 from 3, complete sequence Length = 191723 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagagga 907 ||||||||||||||||||||||| Sbjct: 94255 gaggaggaggagaatgaagagga 94277
>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete sequence Length = 174286 Score = 46.1 bits (23), Expect = 0.40 Identities = 29/31 (93%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataagga 913 ||||||||||||| || |||||||||||||| Sbjct: 47543 aggaggaggaggataaggaagaggataagga 47513
>gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosome 9, complete sequence Length = 216396 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagagga 907 |||||||||||||||||| |||||||| Sbjct: 186740 aaaggaggaggaggagaaggaagagga 186766
>emb|CT829365.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA127G03, full insert sequence Length = 1415 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 94 cgccgccgccgccatgtcgtcc 115
>emb|CT831676.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA031E06, full insert sequence Length = 746 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 cctcgccgccgccgccatgtcg 197 |||||||||||||||||||||| Sbjct: 68 cctcgccgccgccgccatgtcg 89
>emb|CT831588.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA037D17, full insert sequence Length = 1329 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 228 cgccgccgccgccatgtcgtcc 249
>ref|NM_001074823.1| Oryza sativa (japonica cultivar-group) Os11g0620000 (Os11g0620000) mRNA, complete cds Length = 1054 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 32 tcctcgccgccgccgccatgtc 53
>ref|NM_001066782.1| Oryza sativa (japonica cultivar-group) Os07g0609000 (Os07g0609000) mRNA, complete cds Length = 1305 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 81 cgccgccgccgccatgtcgtcc 102
>ref|NM_001066781.1| Oryza sativa (japonica cultivar-group) Os07g0608900 (Os07g0608900) mRNA, complete cds Length = 1341 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 99 cgccgccgccgccatgtcgtcc 120
>ref|NM_001063225.1| Oryza sativa (japonica cultivar-group) Os06g0130500 (Os06g0130500) mRNA, complete cds Length = 726 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 cctcgccgccgccgccatgtcg 197 |||||||||||||||||||||| Sbjct: 66 cctcgccgccgccgccatgtcg 87
>gb|AC189886.3| Rhesus Macaque BAC CH250-65H9 () complete sequence Length = 177699 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 123621 aaggaggaggaggagaaagaagagga 123596
>dbj|AK226441.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-12-G22 Length = 1461 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 ggagatgactctagaggagtacgagaaaat 940 ||||||||||||||| ||||| |||||||| Sbjct: 880 ggagatgactctagaagagtatgagaaaat 909
>gb|AC188114.1| Pongo pygmaeus abelii chromosome UNK clone CH276-85H12, complete sequence Length = 221188 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaaga 904 |||||||||||||||||||||| Sbjct: 198163 aggaggaggaggagaatgaaga 198184
>gb|AC163705.3| Gallus gallus BAC clone CH261-115D21 from chromosome ul, complete sequence Length = 196638 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggat 908 |||||||||||||| ||||||||||| Sbjct: 49524 aggaggaggaggaggatgaagaggat 49499 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 100284 aggaggaggaggaggatgaagagga 100308
>gb|BC118114.1| Bos taurus junction plakoglobin, mRNA (cDNA clone MGC:137835 IMAGE:8082644), complete cds Length = 3285 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1411 ggaacaaataatgtgtttttcttttctttc 1440 |||||||| |||| |||||||||||||||| Sbjct: 111 ggaacaaagaatgagtttttcttttctttc 82
>emb|CT027591.10| Zebrafish DNA sequence from clone CH73-117F7 in linkage group 2, complete sequence Length = 72596 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||| |||||||||| Sbjct: 46758 aaggaggaggaggaggatgaagagga 46783
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 7987 aaggaggaggaggagaaggaagagga 8012
>ref|XM_485681.4| PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA Length = 3869 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 235 aaggaggaggaggagaaggaggaggagaaggaga 268 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||||| || ||||| |||||| Sbjct: 343 aaggaggaggaggagaaggaggaggagaaggag 375
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 gcggcgcaggccgcggcggcaa 282 |||||||||||||||||||||| Sbjct: 4717316 gcggcgcaggccgcggcggcaa 4717295
>ref|XM_359648.1| Magnaporthe grisea 70-15 hypothetical protein (MG05129.4) partial mRNA Length = 6036 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1077 gacaaggagaagaagaaggaaa 1098 |||||||||||||||||||||| Sbjct: 2749 gacaaggagaagaagaaggaaa 2770
>ref|NM_124092.2| Arabidopsis thaliana RNA binding (AT5G47210) mRNA, complete cds Length = 1481 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 ggagatgactctagaggagtacgagaaaat 940 ||||||||||||||| ||||| |||||||| Sbjct: 894 ggagatgactctagaagagtatgagaaaat 923
>gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosome 7, complete sequence Length = 163916 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 56369 aaggaggaggaggagaaggaagagga 56344
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||| |||||||||| Sbjct: 79095 aaggaggaggaggaggatgaagagga 79070
>gb|AC154520.3| Mus musculus BAC clone RP23-471P16 from chromosome 14, complete sequence Length = 199186 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||| |||||||||| Sbjct: 120262 aaggaggaggaggaggatgaagagga 120287
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence Length = 258544 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| | |||||||| |||||| Sbjct: 78141 aaaggaggaggaggaggaggaagaggagaaggag 78108
>gb|AC163337.2| Mus musculus chromosome 5, clone RP23-297I15, complete sequence Length = 154578 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 69044 aaggaggaggaggagaaggaggaggagaaggaga 69011 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||||| || ||||| |||||| Sbjct: 68936 aaggaggaggaggagaaggaggaggagaaggag 68904
>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence Length = 167235 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 120317 aaggaggaggaggagaaggaagagga 120292
>gb|AC102354.14| Mus musculus chromosome 17, clone RP23-80J17, complete sequence Length = 117703 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 101041 aaggaggaggaggagaaggaagagga 101066
>ref|XM_580440.2| PREDICTED: Bos taurus similar to zinc finger protein 297 (LOC538456), mRNA Length = 2761 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggat 908 |||||||||||||| ||||||||||| Sbjct: 1570 aggaggaggaggaggatgaagaggat 1545
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 |||||||||||||||| ||||||||| Sbjct: 158413 aaggaggaggaggagagtgaagagga 158388
>gb|AC139755.3| Mus musculus BAC clone RP24-96N20 from chromosome 6, complete sequence Length = 192869 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 80670 aaggaggaggaggagaaggaggaggagaaggaga 80703
>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence Length = 189145 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 886 aggaggaggagaatgaagaggataaggaga 915 ||||||||||||| |||||||| ||||||| Sbjct: 167566 aggaggaggagaaggaagaggaaaaggaga 167537
>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence Length = 193386 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| |||||| | ||||||| Sbjct: 103287 aaggaggaggaggagaaagaagagaagaaggaga 103320 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagagga 907 ||||| ||||||||||||||||||| Sbjct: 60307 aggagaaggaggagaatgaagagga 60283
>gb|AC140196.3| Mus musculus BAC clone RP24-267C3 from chromosome 7, complete sequence Length = 183537 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 888 gaggaggagaatgaagaggataagga 913 ||||||||| |||||||||||||||| Sbjct: 180971 gaggaggaggatgaagaggataagga 180996
>gb|AC123838.4| Mus musculus BAC clone RP23-385N1 from chromosome 8, complete sequence Length = 219477 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 25669 aaggaggaggaggagaaggaagagga 25644
>ref|NM_174694.1| Bos taurus cysteine and histidine-rich 1 (CYHR1), transcript variant 2, mRNA Length = 1895 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1180 gcggccgtgggcgtgggaggggccgc 1205 ||||||||||||||||| |||||||| Sbjct: 986 gcggccgtgggcgtgggcggggccgc 961
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 123920 aaggaggaggaggagaaggaagagga 123945
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 8724 aaggaggaggaggagaaggaggaggagaaggaga 8757 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||||| || ||||| |||||| Sbjct: 8832 aaggaggaggaggagaaggaggaggagaaggag 8864
>gb|AC005166.1| Homo sapiens PAC clone RP5-905M6 from 7, complete sequence Length = 108245 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 51519 aaggaggaggaggagaaagaagagga 51494
>gb|AC118012.9| Mus musculus chromosome 8, clone RP23-454D11, complete sequence Length = 192971 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 118227 aaggaggaggaggagaaggaagagga 118252
>gb|AC117690.10| Mus musculus chromosome 16, clone RP23-446I8, complete sequence Length = 189033 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 37605 aaggaggaggaggagaaagaagagga 37580
>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence Length = 245390 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 |||||||||||||||||||| ||||| Sbjct: 143451 aaggaggaggaggagaatgaggagga 143426
>gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome 18, complete sequence Length = 216358 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 13308 aaggaggaggaggagaaagaagagga 13283 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||||| |||||||| Sbjct: 13286 aggaggaggaggagaaagaagagga 13262
>gb|AC146237.2| Pan troglodytes BAC clone RP43-31L18 from 7, complete sequence Length = 167875 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 78538 aaggaggaggaggagaaagaagagga 78513
>gb|AY184809.1| Oryza sativa (japonica cultivar-group) seed protein mRNA, complete cds Length = 813 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 96 cgccgccgccgccatgtcgtcc 117
>gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosome 6, complete sequence Length = 178174 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 55741 aaggaggaggaggagaaggaagagga 55716
>gb|AC098726.2| Mus musculus BAC clone RP23-3E20 from 17, complete sequence Length = 195690 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 157543 aaggaggaggaggagaaggaagagga 157568
>gb|AC112262.3| Mus musculus BAC clone RP23-363E22 from 7, complete sequence Length = 150399 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 888 gaggaggagaatgaagaggataagga 913 ||||||||| |||||||||||||||| Sbjct: 28194 gaggaggaggatgaagaggataagga 28219
>gb|AC013391.12| Homo sapiens chromosome 15, clone RP11-429B14, complete sequence Length = 210797 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 46876 aaggaggaggaggagaaggaggaggagaaggaga 46909
>gb|AC099603.15| Mus musculus chromosome 12, clone RP23-333M19, complete sequence Length = 206836 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaaga 904 |||||||||||||||||||||| Sbjct: 79177 aggaggaggaggagaatgaaga 79156
>gb|AC114403.15| Mus musculus chromosome 1, clone RP23-197H1, complete sequence Length = 221305 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 886 aggaggaggagaatgaagagga 907 |||||||||||||||||||||| Sbjct: 181273 aggaggaggagaatgaagagga 181252 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 886 aggaggaggagaatgaagagga 907 |||||||||||||||||||||| Sbjct: 181355 aggaggaggagaatgaagagga 181334 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 181123 aggaggaggaggaggatgaagagga 181099
>gb|AC159973.2| Mus musculus chromosome 1, clone RP24-207D15, complete sequence Length = 136567 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 30455 aaggaggaggaggagaaggaagagga 30430
>gb|BT010371.1| Arabidopsis thaliana At5g47210 mRNA, complete cds Length = 1074 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 ggagatgactctagaggagtacgagaaaat 940 ||||||||||||||| ||||| |||||||| Sbjct: 687 ggagatgactctagaagagtatgagaaaat 716
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 71421 tcctcgccgccgccgccatgtc 71442
>gb|AY129504.1|AY129503S2 Bos taurus cysteine and histidine-rich cytoplasmic protein (CYHR1) gene, exon 3 and complete cds Length = 1375 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1180 gcggccgtgggcgtgggaggggccgc 1205 ||||||||||||||||| |||||||| Sbjct: 466 gcggccgtgggcgtgggcggggccgc 441
>gb|DQ298254.1| Chlamydomonas reinhardtii radial spoke protein 1 (RSP1) mRNA, complete cds Length = 3103 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagaggataaggag 914 |||||||||||||| |||||||| |||||| Sbjct: 1161 gaggaggaggagaaagaagaggagaaggag 1190
>gb|AC159091.2| Mus musculus chromosome 15, clone RP24-283J18, complete sequence Length = 65063 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 24984 aaggaggaggaggagaaagaagagga 24959
>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence Length = 196977 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 65133 aaggaggaggaggagaaggaagagga 65108 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagaggataaggag 914 |||||||||||||| |||||||| |||||| Sbjct: 68289 gaggaggaggagaaggaagaggagaaggag 68318
>gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, complete sequence Length = 191833 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 886 aggaggaggagaatgaagaggataaggaga 915 ||||||||||||| |||||||| ||||||| Sbjct: 12982 aggaggaggagaaggaagaggaaaaggaga 12953
>gb|AY140040.1| Arabidopsis thaliana putative protein (At5g47210) mRNA, complete cds Length = 1415 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 ggagatgactctagaggagtacgagaaaat 940 ||||||||||||||| ||||| |||||||| Sbjct: 879 ggagatgactctagaagagtatgagaaaat 908
>gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166452 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 141086 aaggaggaggaggagaaggaagagga 141111
>gb|AC013787.15| Homo sapiens chromosome 15, clone RP11-531E13, complete sequence Length = 176304 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 22212 aaggaggaggaggagaaggaggaggagaaggaga 22179
>gb|AC148708.1| Macaca mulatta Major Histocompatibility Complex BAC MMU387P10, complete sequence Length = 176807 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 138216 aaggaggaggaggagaaagaagagga 138191
>gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex BAC MMU118H05, complete sequence Length = 155090 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 886 aaggaggaggaggagaaagaagagga 861
>gb|AC148671.1| Macaca mulatta Major Histocompatibility Complex BAC MMU065H09, complete sequence Length = 177726 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 123635 aaggaggaggaggagaaagaagagga 123610
>gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex BAC MMU038L02, complete sequence Length = 168263 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 35051 aaggaggaggaggagaaagaagagga 35026
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 24991871 cgccgccgccgccatgtcgtcc 24991892 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 24996069 cgccgccgccgccatgtcgtcc 24996090 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtccctc 203 |||||||||||||||||| |||||| Sbjct: 19085939 cgccgccgccgccatgtcctccctc 19085963
>gb|AC020551.5| Homo sapiens BAC clone RP11-404J23 from 4, complete sequence Length = 120038 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 71854 aaggaggaggaggagaaggaagagga 71829
>emb|AL583804.5| Human DNA sequence from clone RP11-276E17 on chromosome 1 Contains the 5' end of a novel gene, a novel gene and a pseudogene similar to flavin-containing monooxygenase proteins, complete sequence Length = 168837 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 878 tgcaaaggaggaggaggagaatgaagagga 907 ||||||||||||||||||| | |||||||| Sbjct: 1778 tgcaaaggaggaggaggaggaggaagagga 1749
>emb|AL390115.18| Human DNA sequence from clone RP11-479J7 on chromosome 1 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 102533 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 878 tgcaaaggaggaggaggagaatgaagagga 907 ||||||||||||||||||| | |||||||| Sbjct: 102311 tgcaaaggaggaggaggaggaggaagagga 102282
>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201259 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 136740 aaggaggaggaggagaaggaagagga 136765
>gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete sequence Length = 1399 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 704 gaaacgtgatggtgcaggccgtgggaactgggga 737 |||||||||||| || ||||||| |||||||||| Sbjct: 586 gaaacgtgatggagctggccgtgcgaactgggga 619
>gb|AY085859.1| Arabidopsis thaliana clone 19104 mRNA, complete sequence Length = 1437 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 ggagatgactctagaggagtacgagaaaat 940 ||||||||||||||| ||||| |||||||| Sbjct: 887 ggagatgactctagaagagtatgagaaaat 916
>gb|AC023608.3| Mus musculus chromosome 18 clone CT7-402J1, complete sequence Length = 138710 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 885 gaggaggaggagaatgaagaggataaggag 914 |||||||||||||| |||||||| |||||| Sbjct: 103235 gaggaggaggagaaggaagaggaaaaggag 103206
>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5' end of a novel gene, the Sfrs1 gene for arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1 gene for vascular endothelial zinc finger 1, a novel gene (2210416O15Rik), the gene for the likely ortholog of H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the Mrps23 gene for mitochondrial ribosomal protein S23 and two CpG islands, complete sequence Length = 223276 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 |||| ||||||||||| | ||||||||||||||| Sbjct: 117669 aaagaaggaggaggaggaggaagaggataaggag 117636
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 93084 cgccgccgccgccatgtcgtcc 93063 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 97282 cgccgccgccgccatgtcgtcc 97261
>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 203827 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagaggataaggag 914 |||||||||||||| |||||||| |||||| Sbjct: 110057 gaggaggaggagaaggaagaggagaaggag 110086
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||| | |||||||| ||||||| Sbjct: 66072 aaggaggaggaggaggaggaagaggagaaggaga 66039
>emb|AL607146.6| Mouse DNA sequence from clone RP23-312G6 on chromosome 11 Contains the 5' end of a novel gene, complete sequence Length = 191046 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 885 gaggaggaggagaatgaagaggataaggag 914 |||||||||||||| |||||||| |||||| Sbjct: 45991 gaggaggaggagaaggaagaggaaaaggag 46020
>gb|AC156024.2| Mus musculus BAC clone RP23-89J1 from chromosome 16, complete sequence Length = 240451 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 34239 aaggaggaggaggagaaagaagagga 34264
>gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H21, complete sequence Length = 186609 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 ||||||||||||||||||||| | ||| |||||| Sbjct: 69730 aaaggaggaggaggagaatgagggggagaaggag 69763
>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence Length = 181497 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 139420 aaggaggaggaggagaaggaagagga 139395
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaaga 904 |||||||||||||||||||||| Sbjct: 28459 aggaggaggaggagaatgaaga 28480
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 gcttgctgcggcgcaggccgcg 275 |||||||||||||||||||||| Sbjct: 1592224 gcttgctgcggcgcaggccgcg 1592245
>gb|AC016961.28| Homo sapiens 3 BAC RP11-394J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98945 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||||| || ||||| ||||||| Sbjct: 47621 aaggaggaggaggagaaggaggaggagaaggaga 47654
>gb|AC128693.8| Homo sapiens 3 BAC RP13-563D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143617 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||||| || ||||| |||||| Sbjct: 76721 aaaggaggaggaggagaaggaggaggagaaggag 76688
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 32551 cgccgccgccgccatgtcgtcc 32572 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 36749 cgccgccgccgccatgtcgtcc 36770
>dbj|AP006666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46L11, TM0365, complete sequence Length = 122449 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1416 aaataatgtgtttttcttttct 1437 |||||||||||||||||||||| Sbjct: 65067 aaataatgtgtttttcttttct 65046
>gb|AC026591.15| Homo sapiens chromosome 17, clone RP11-655D3, complete sequence Length = 153472 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 130564 aaggaggaggaggagaaggaagagga 130589
>dbj|AK106677.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A11, full insert sequence Length = 1055 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 33 tcctcgccgccgccgccatgtc 54
>dbj|AK106125.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F03, full insert sequence Length = 1305 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 81 cgccgccgccgccatgtcgtcc 102
>dbj|AK105360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D02, full insert sequence Length = 726 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 cctcgccgccgccgccatgtcg 197 |||||||||||||||||||||| Sbjct: 66 cctcgccgccgccgccatgtcg 87
>dbj|AK104937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B09, full insert sequence Length = 866 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 81 cgccgccgccgccatgtcgtcc 102
>dbj|AK104406.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D12, full insert sequence Length = 1017 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 21 cgccgccgccgccatgtcgtcc 42
>dbj|AK104294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H07, full insert sequence Length = 1060 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 84 cgccgccgccgccatgtcgtcc 105
>dbj|AK068639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155J08, full insert sequence Length = 1342 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 100 cgccgccgccgccatgtcgtcc 121
>dbj|AK067330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101E17, full insert sequence Length = 1058 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtcc 200 |||||||||||||||||||||| Sbjct: 82 cgccgccgccgccatgtcgtcc 103
>gb|AC015592.6|AC015592 Homo sapiens, clone RP11-44O2, complete sequence Length = 156961 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1424 tgtttttcttttctttcagtgt 1445 |||||||||||||||||||||| Sbjct: 27277 tgtttttcttttctttcagtgt 27256
>emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene) Length = 1071 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1120 ccaagaagtctcttagcatcaacgagttcctcaagcctgccgaggg 1165 ||||||||||| | |||||||| || || || |||||||||||||| Sbjct: 890 ccaagaagtctgtgagcatcaatgaatttcttaagcctgccgaggg 935
>emb|AL929392.11| Zebrafish DNA sequence from clone CH211-79L17, complete sequence Length = 172427 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 58330 aaggaggaggaggagaaggaagagga 58305
>dbj|AK122276.1| Mus musculus mRNA for mKIAA0411 protein Length = 7165 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggagat 916 |||||||||||||| | |||||||| |||||||| Sbjct: 3930 aggaggaggaggaggaggaagaggagaaggagat 3897
>dbj|AP000811.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-777F6, complete sequences Length = 176953 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 37840 aaggaggaggaggagaaggaagagga 37815
>dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete sequence Length = 176713 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1424 tgtttttcttttctttcagtgt 1445 |||||||||||||||||||||| Sbjct: 140682 tgtttttcttttctttcagtgt 140661
>gb|AC156390.3| Mus musculus 10 BAC RP24-280O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158038 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 139418 aaggaggaggaggagaaggaagagga 139393
>gb|AC153591.4| Mus musculus 6 BAC RP23-301O22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211061 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagaggataaggagat 916 |||||||||||||| | |||||||| |||||||| Sbjct: 88334 aggaggaggaggaggaggaagaggagaaggagat 88301
>gb|AC155287.6| Mus musculus 6 BAC RP23-103G18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221335 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 181420 aaggaggaggaggagaaggaagagga 181445
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 64321 tcctcgccgccgccgccatgtc 64342
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tcctcgccgccgccgccatgtc 196 |||||||||||||||||||||| Sbjct: 56871 tcctcgccgccgccgccatgtc 56892
>emb|CT009740.17| Mouse DNA sequence from clone RP23-9N14 on chromosome 12, complete sequence Length = 143996 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaaga 904 |||||||||||||||||||||| Sbjct: 140734 aggaggaggaggagaatgaaga 140755
>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228194 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 176072 aaggaggaggaggagaaggaagagga 176097
>emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chromosome 13, complete sequence Length = 192075 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 80931 aaggaggaggaggagaaggaagagga 80956 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 80994 aaggaggaggaggagaaggaagagga 81019 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 141626 aaggaggaggaggagaaggaagagga 141601
>emb|CT027991.8| Mouse DNA sequence from clone RP23-418N2 on chromosome 16, complete sequence Length = 186296 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 164 gcagccccccatcctcgccgccgccgccat 193 |||||||||||||||| || |||||||||| Sbjct: 131565 gcagccccccatcctcccccccgccgccat 131536
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence Length = 236514 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 886 aggaggaggagaatgaagaggataaggaga 915 ||||||||||||| |||||||| ||||||| Sbjct: 39736 aggaggaggagaaggaagaggacaaggaga 39765
>gb|AC003664.1|AC003664 Homo sapiens chromosome 17, clone hCIT54K19, complete sequence Length = 202233 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 75436 aaggaggaggaggagaaggaagagga 75411
>emb|CT010501.6| Mouse DNA sequence from clone RP23-333D13 on chromosome 17, complete sequence Length = 207346 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 49669 aaggaggaggaggagaaggaagagga 49694
>emb|CT027693.11| Mouse DNA sequence from clone RP24-120H1 on chromosome 16, complete sequence Length = 186376 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagaggataaggaga 915 ||||||||||||||| | |||||||| ||||||| Sbjct: 49547 aaggaggaggaggaggaggaagaggagaaggaga 49580
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagaggat 908 |||||||||||||||| ||||||||| Sbjct: 80792 aggaggaggaggagaaggaagaggat 80817
>emb|AL928728.9| Zebrafish DNA sequence from clone CH211-212E24, complete sequence Length = 206513 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1422 tgtgtttttcttttctttcagtgtgt 1447 ||||||||| |||||||||||||||| Sbjct: 67360 tgtgttttttttttctttcagtgtgt 67385
>emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on chromosome 2, complete sequence Length = 209967 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 64923 aaggaggaggaggagaaggaagagga 64948
>emb|AL805937.11| Mouse DNA sequence from clone RP23-139B4 on chromosome X, complete sequence Length = 178671 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggag 914 |||||||||||||||| | |||||||| |||||| Sbjct: 110638 aaaggaggaggaggaggaggaagaggagaaggag 110671
>emb|AL844519.9| Mouse DNA sequence from clone RP23-250M11 on chromosome 2, complete sequence Length = 183051 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaag 903 |||||||||||||||||||||| Sbjct: 91568 aaggaggaggaggagaatgaag 91547
>gb|AC153910.6| Mus musculus 6 BAC RP23-337M7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214838 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 23490 aaggaggaggaggagaaggaagagga 23515
>gb|AC115893.10| Mus musculus chromosome 1, clone RP24-442I13, complete sequence Length = 153053 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 882 aaggaggaggaggagaatgaagagga 907 |||||||||||||| ||||||||||| Sbjct: 98982 aaggaggaggaggacaatgaagagga 99007 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 98958 aggaggaggaggaggatgaagagga 98982
>gb|AC162179.2| Mus musculus BAC clone RP23-197K11 from chromosome 9, complete sequence Length = 210741 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 882 aaggaggaggaggagaatgaagagga 907 ||||||||||||||||| |||||||| Sbjct: 166451 aaggaggaggaggagaaggaagagga 166426
>dbj|AP000747.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21F7, complete sequence Length = 103023 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1424 tgtttttcttttctttcagtgt 1445 |||||||||||||||||||||| Sbjct: 12913 tgtttttcttttctttcagtgt 12892
>gb|AC190152.2| Gallus gallus BAC clone CH261-171P12 from chromosome z, complete sequence Length = 287458 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||||| |||||||| Sbjct: 2423 aggaggaggaggagaaggaagagga 2399
>gb|AC158603.7| Mus musculus 10 BAC RP24-466C12 () complete sequence Length = 49501 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 881 aaaggaggaggaggagaatgaagaggataagga 913 |||||| ||||||||||| |||||||| ||||| Sbjct: 17028 aaaggaagaggaggagaaggaagaggaaaagga 16996
>gb|AC188539.6| Canis Familiaris chromosome 17, clone XX-365L15, complete sequence Length = 182148 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||||| |||||||| Sbjct: 139053 aggaggaggaggagaaggaagagga 139077
>ref|XM_414952.2| PREDICTED: Gallus gallus hypothetical LOC416655 (LOC416655), mRNA Length = 826 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 204 aggaggaggaggaggatgaagagga 228
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 260 tgcggcgcaggccgcggcggcaaagaaggccct 292 |||| |||||| |||||||||||||||||||| Sbjct: 1233234 tgcgccgcaggtggcggcggcaaagaaggccct 1233266
>gb|AC118003.22| Mus musculus chromosome 5, clone RP23-146G20, complete sequence Length = 176114 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||||| |||||||| Sbjct: 108892 aggaggaggaggagaaggaagagga 108916
>gb|AC192341.2| Pan troglodytes BAC clone CH251-427L16 from chromosome 7, complete sequence Length = 172779 Score = 42.1 bits (21), Expect = 6.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 881 aaaggaggaggaggagaatgaagaggataaggagatg 917 |||||||||||||||| | || ||||| ||||||||| Sbjct: 150067 aaaggaggaggaggaggaggaggaggaaaaggagatg 150103
>dbj|AK243224.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100043O17, full insert sequence Length = 1731 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 cctcgccgccgccgccatgtc 196 ||||||||||||||||||||| Sbjct: 550 cctcgccgccgccgccatgtc 570
>ref|XM_795323.2| PREDICTED: Strongylocentrotus purpuratus similar to mKIAA0819 protein (LOC586871), partial mRNA Length = 3658 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 38 aggaggaggaggagtatgaagagga 62
>ref|XM_001181030.1| PREDICTED: Strongylocentrotus purpuratus similar to mKIAA0819 protein (LOC586871), partial mRNA Length = 3658 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 |||||||||||||| |||||||||| Sbjct: 38 aggaggaggaggagtatgaagagga 62
>dbj|AK236729.1| Sus scrofa mRNA, clone:OVRM10221E03, expressed in ovary Length = 3243 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 883 aggaggaggaggagaatgaagagga 907 ||||||||||||||||||| ||||| Sbjct: 933 aggaggaggaggagaatgaggagga 957
>ref|NM_001069029.1| Oryza sativa (japonica cultivar-group) Os08g0558400 (Os08g0558400) mRNA, partial cds Length = 3708 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtc 199 ||||||||||||||||||||| Sbjct: 35 cgccgccgccgccatgtcgtc 55
>ref|NM_001065177.1| Oryza sativa (japonica cultivar-group) Os06g0728300 (Os06g0728300) mRNA, complete cds Length = 2694 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 cgtctgcttcccgaacagcttgttg 156 ||||| ||||||||||||||||||| Sbjct: 1581 cgtcttcttcccgaacagcttgttg 1605
>ref|NM_001065176.1| Oryza sativa (japonica cultivar-group) Os06g0728200 (Os06g0728200) mRNA, complete cds Length = 2781 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 cgtctgcttcccgaacagcttgttg 156 ||||| ||||||||||||||||||| Sbjct: 1812 cgtcttcttcccgaacagcttgttg 1788
>ref|NM_001062951.1| Oryza sativa (japonica cultivar-group) Os05g0579000 (Os05g0579000) mRNA, complete cds Length = 1944 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 gccccccatcctcgccgccgc 187 ||||||||||||||||||||| Sbjct: 153 gccccccatcctcgccgccgc 133
>ref|NM_001062368.1| Oryza sativa (japonica cultivar-group) Os05g0476000 (Os05g0476000) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgccgccgccatgtcgtc 199 ||||||||||||||||||||| Sbjct: 368 cgccgccgccgccatgtcgtc 388 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 270,731,925 Number of extensions: 18607309 Number of successful extensions: 905744 Number of sequences better than 10.0: 744 Number of HSP's gapped: 905664 Number of HSP's successfully gapped: 879 Length of query: 1620 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1597 Effective length of database: 18,503,978,556 Effective search space: 29550853753932 Effective search space used: 29550853753932 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
