ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf124p23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK109327:Os07g0530300 189 3e-48
2AK105411:Os11g0124900 32 0.57
3Os09g0542500:Os09g0542500 29 4.8
4AK120811:Os05g0587300 29 6.3
5AK111030:Os12g0122400 29 6.4
6AK105493:Os01g0675800 29 6.4
7AK102188:Os02g0575900 28 8.3

>AK109327:Os07g0530300 |
          Length = 144
 Score =  189 bits (480), Expect = 3e-48
 Identities = 94/135 (69%), Positives = 108/135 (80%)
 Frame = +3

Query: 231 DFLEPMVALDETHXXXXXXXXXXXXLVSGKEEGRQVGLKMGFQVGEELGFYQGCLDVWMS 410
           DFLEP V LDETH            LVSGKEEGRQVGLK GFQVGEELGFYQGCLDVW S
Sbjct: 10  DFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEELGFYQGCLDVWTS 69

Query: 411 IIRLDQDAFSARVRKHMEQLAALLSNYPLSDPENNQLQDMMKDIRLKFRVIMGSLRAKFG 590
           ++ +DQDAFSARVRK++EQLAALL +YPLS+PE+ Q+QD+M+ IRLKFRVI  SL  K  
Sbjct: 70  LVSIDQDAFSARVRKNIEQLAALLRSYPLSNPEDEQVQDIMEKIRLKFRVITASLGTKLE 129

Query: 591 YEGRPTSSEQDFEDI 635
           Y+GRPTSS+QD ED+
Sbjct: 130 YQGRPTSSKQDVEDL 144



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>AK105411:Os11g0124900 |
          Length = 642

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -1

Query: 378 ILALHLPGNPSLNRPAFLLPSQIPSHRHNHLCNR-----LDNVSRLRLP 247
           +L LH PG+ S  R A ++ +++   +H HL  R     L +VSR ++P
Sbjct: 39  LLGLHRPGHGSEERAAVVISTELGFSKHKHLDGRMKHKLLKDVSRKKIP 87



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>Os09g0542500:Os09g0542500 |
          Length = 722

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 121 SVVLERRRLCSTAPSLRSGIAGGAAAFAQPLRSGIADA 8
           +V  +R+RL   A   R  +AG  AA+A  LRS +ADA
Sbjct: 23  AVCRDRKRLIKAAADRRFALAGAHAAYAAALRS-VADA 59



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>AK120811:Os05g0587300 |
          Length = 555

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 32  RLSKGGGAACDSRSEARSG*AKAAALEDYGAG 127
           RL  GG AA  S S + +G AK+ AL + GAG
Sbjct: 44  RLRPGGAAATPSSSSSSAGSAKSPALCNAGAG 75



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>AK111030:Os12g0122400 |
          Length = 97

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 378 ILALHLPGNPSLNRPAFLLPSQIPSHRHNHLCNRL 274
           +L LH PG+ S  R A ++ +++   +H HL  R+
Sbjct: 42  LLGLHRPGHGSEERAAVVISTEMGFSKHKHLDGRM 76



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>AK105493:Os01g0675800 |
          Length = 290

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 93  AQPLRASDRESQAAPPPLLNRSDRESQTP 7
           A P  A+  +S AAPPP   +S  E  TP
Sbjct: 168 APPAAAAANKSMAAPPPTATKSKTEEATP 196



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>AK102188:Os02g0575900 |
          Length = 700

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 75  RLGAVEQRRRRSRTTEPANRSSKAVSSPLIKNPKVSWNYILLQTE*SLDVTMDFLEPMVA 254
           R+    Q RRR R  +  +R    V    I  P VSW  +    E  LD+ +D +E  + 
Sbjct: 87  RIKRSHQARRRQRYEDQEDRVHGNVHFASICPPPVSWLELKHNMEVKLDLNLDDIEKSIV 146

Query: 255 L 257
           +
Sbjct: 147 I 147


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,649,344
Number of extensions: 669607
Number of successful extensions: 1904
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1901
Number of HSP's successfully gapped: 7
Length of query: 351
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 249
Effective length of database: 11,315,673
Effective search space: 2817602577
Effective search space used: 2817602577
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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