ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf124p23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 157 bits (79), Expect = 1e-34 Identities = 97/103 (94%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 250 atgtatatagacatactttagagtgtagattcactcattttgctccgtatgtagtctata 191 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||||||||||||||||||||| ||||||| ||| ||||||||| Sbjct: 190 gttgaatctcttaaaagacttgtatttaggaacggagggagta 148 Score = 79.8 bits (40), Expect = 2e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1695 atgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtc 1640 Score = 77.8 bits (39), Expect = 7e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 824 gacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 217281 gacatattttagagtatagattcactcattttgcttcgtatgtagtc 217235 Score = 71.9 bits (36), Expect = 4e-09 Identities = 88/104 (84%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 |||||||||||||||||||| | || | ||||| |||||||||||||||||||| | | Sbjct: 194397 atgtatatagacatactttaaaatgaatattcaatcattttgcttcgtatgtagacatct 194456 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| |||| |||||||||||| ||||||| ||| |||| |||| Sbjct: 194457 agtgaaatcgcttaaaagacttatatttaggaacggaggaagta 194500 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag 868 |||||||||||| |||||||||| |||||| |||| ||||||| ||||||||| Sbjct: 143280 atgtatatagacgtactttagagcatagatttactcgttttgctccgtatgtag 143227 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||| ||||| |||||||||||| || ||| |||||||||| | ||||||||||| Sbjct: 142750 atgtacatagatatactttagagtataaattaactcattttgttccgtatgtagtc 142805 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 866 tagtccgtagttgaatctcttaaaagacttttatttagtaaccgagggagtatt 919 ||||| ||||| ||| ||||||||||||| ||||||| ||| ||||||||||| Sbjct: 258 tagtctgtagtgaaatttcttaaaagacttatatttaggaacggagggagtatt 311
>gb|DQ245074.1| Zea mays clone 12713 mRNA sequence Length = 609 Score = 155 bits (78), Expect = 4e-34 Identities = 270/334 (80%) Strand = Plus / Plus Query: 231 gattttcttgaaccaatggtagccttagacgagacacattatcaagacggttacaaagat 290 |||||||||||||||| ||| |||||| ||||||||||| || || || |||| | || Sbjct: 32 gattttcttgaaccaactgtactcttagatgagacacattaccaggaggggtacagaaat 91 Query: 291 ggttatgacgatggcttggtatctgggaaggaagaaggaaggcaggtcggtttaaagatg 350 || || | ||||| |||| |||||| |||||||| || |||||||| |||||||||||| Sbjct: 92 ggctacaatgatggtttggcatctggaaaggaagaggggaggcaggttggtttaaagatg 151 Query: 351 ggtttccaggtaggtgaagagctaggattctaccagggctgcttggatgtgtggatgtca 410 ||||||||||| |||||||| || || |||| || ||||| |||||||||||| ||| Sbjct: 152 ggtttccaggtcggtgaagaactgggtttctttcacggctgtctggatgtgtggacgtct 211 Query: 411 ataattcgccttgatcaagatgcattctcagctcgggttaggaaacacatggagcaatta 470 ||||| | ||||||| |||| ||| |||||||||| ||||| | || |||||| | Sbjct: 212 gcaattctcattgatcagaatgccttcacagctcgggtcaggaagaatattgagcaactg 271 Query: 471 gctgcacttctaagcaactatcctttgtccgatccagagaataatcagcttcaagacatg 530 |||||||| | ||| |||||| |||||||||| |||||| | || |||||||| || Sbjct: 272 gctgcactggtgggcagctatccgctgtccgatccggagaatgaacaaattcaagacgtg 331 Query: 531 atgaaggatataaggctgaaattcagggttatca 564 ||| || | |||||||||||||||||||| |||| Sbjct: 332 atggagaagataaggctgaaattcagggtcatca 365
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 125 bits (63), Expect = 3e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 7472 atgtatatagacatactttagagtgtagatgcactcattttgctttgtatgtagtccata 7531 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagta 917 || ||||||| ||||||||| ||||||| ||| ||| ||||| Sbjct: 7532 gtgtaatctctaaaaagacttatatttaggaacggagtgagta 7574 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 860 cgtatgtagtccgtagttgaatctcttaaaagacttttatttagtaaccgagggagtatt 919 |||||||||| |||||| |||||||| ||||||| | ||||||| || ||||||||||| Sbjct: 7470 cgtatgtagttcgtagtggaatctctaaaaagacctatatttaggaatggagggagtatt 7411
>emb|CT831320.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI023G17, full insert sequence Length = 1011 Score = 121 bits (61), Expect = 5e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 254 cttagacgagacacattatcaagacggttacaaagatggttatgacgatggcttggtatc 313 |||||| |||||||| |||||| |||| ||| |||||||| || |||||||| || Sbjct: 373 cttagatgagacacactatcaaacgggtttcaagaatggttatagtgagggcttggtgtc 432 Query: 314 tgggaaggaagaaggaaggcaggtcggtttaaagatgggtttccaggtaggtgaagagct 373 ||| || ||||| ||||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 433 tggaaaagaagagggaaggcaggttggtttaaagaatggttttcaggtaggtgaagaact 492 Query: 374 aggattctaccagggctgcttggatgtgtggatgtcaataattcgccttgatcaagatgc 433 ||| || || ||||| || ||||||| |||| ||| | || ||||||||||||| Sbjct: 493 aggtttttatcagggatgtctggatgtttggacgtcgttggtttcaattgatcaagatgc 552 Query: 434 attctcagctcgggttaggaaacacatggagcaattagctgcact 478 ||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 553 attctcagctcgggtcaggaaaaacattgagcaactagctgcact 597
>ref|NM_001066381.1| Oryza sativa (japonica cultivar-group) Os07g0530300 (Os07g0530300) mRNA, complete cds Length = 1043 Score = 121 bits (61), Expect = 5e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 254 cttagacgagacacattatcaagacggttacaaagatggttatgacgatggcttggtatc 313 |||||| |||||||| |||||| |||| ||| |||||||| || |||||||| || Sbjct: 439 cttagatgagacacactatcaaacgggtttcaagaatggttatagtgagggcttggtgtc 498 Query: 314 tgggaaggaagaaggaaggcaggtcggtttaaagatgggtttccaggtaggtgaagagct 373 ||| || ||||| ||||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 499 tggaaaagaagagggaaggcaggttggtttaaagaatggttttcaggtaggtgaagaact 558 Query: 374 aggattctaccagggctgcttggatgtgtggatgtcaataattcgccttgatcaagatgc 433 ||| || || ||||| || ||||||| |||| ||| | || ||||||||||||| Sbjct: 559 aggtttttatcagggatgtctggatgtttggacgtcgttggtttcaattgatcaagatgc 618 Query: 434 attctcagctcgggttaggaaacacatggagcaattagctgcact 478 ||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 619 attctcagctcgggtcaggaaaaacattgagcaactagctgcact 663
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 121 bits (61), Expect = 5e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 254 cttagacgagacacattatcaagacggttacaaagatggttatgacgatggcttggtatc 313 |||||| |||||||| |||||| |||| ||| |||||||| || |||||||| || Sbjct: 20697543 cttagatgagacacactatcaaacgggtttcaagaatggttatagtgagggcttggtgtc 20697602 Query: 314 tgggaaggaagaaggaaggcaggtcggtttaaagatgggtttccaggtaggtgaagagct 373 ||| || ||||| ||||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 20697603 tggaaaagaagagggaaggcaggttggtttaaagaatggttttcaggtaggtgaagaact 20697662 Query: 374 aggattctaccagggctgcttggatgtgtggatgtcaataattcgccttgatcaagatgc 433 ||| || || ||||| || ||||||| |||| ||| | || ||||||||||||| Sbjct: 20697663 aggtttttatcagggatgtctggatgtttggacgtcgttggtttcaattgatcaagatgc 20697722 Query: 434 attctcagctcgggttaggaaacacatggagcaattagctgcact 478 ||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 20697723 attctcagctcgggtcaggaaaaacattgagcaactagctgcact 20697767
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 121 bits (61), Expect = 5e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 254 cttagacgagacacattatcaagacggttacaaagatggttatgacgatggcttggtatc 313 |||||| |||||||| |||||| |||| ||| |||||||| || |||||||| || Sbjct: 50293 cttagatgagacacactatcaaacgggtttcaagaatggttatagtgagggcttggtgtc 50352 Query: 314 tgggaaggaagaaggaaggcaggtcggtttaaagatgggtttccaggtaggtgaagagct 373 ||| || ||||| ||||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 50353 tggaaaagaagagggaaggcaggttggtttaaagaatggttttcaggtaggtgaagaact 50412 Query: 374 aggattctaccagggctgcttggatgtgtggatgtcaataattcgccttgatcaagatgc 433 ||| || || ||||| || ||||||| |||| ||| | || ||||||||||||| Sbjct: 50413 aggtttttatcagggatgtctggatgtttggacgtcgttggtttcaattgatcaagatgc 50472 Query: 434 attctcagctcgggttaggaaacacatggagcaattagctgcact 478 ||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 50473 attctcagctcgggtcaggaaaaacattgagcaactagctgcact 50517
>dbj|AK109327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H10, full insert sequence Length = 1043 Score = 121 bits (61), Expect = 5e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 254 cttagacgagacacattatcaagacggttacaaagatggttatgacgatggcttggtatc 313 |||||| |||||||| |||||| |||| ||| |||||||| || |||||||| || Sbjct: 439 cttagatgagacacactatcaaacgggtttcaagaatggttatagtgagggcttggtgtc 498 Query: 314 tgggaaggaagaaggaaggcaggtcggtttaaagatgggtttccaggtaggtgaagagct 373 ||| || ||||| ||||||||||| |||||||||| ||||| |||||||||||||| || Sbjct: 499 tggaaaagaagagggaaggcaggttggtttaaagaatggttttcaggtaggtgaagaact 558 Query: 374 aggattctaccagggctgcttggatgtgtggatgtcaataattcgccttgatcaagatgc 433 ||| || || ||||| || ||||||| |||| ||| | || ||||||||||||| Sbjct: 559 aggtttttatcagggatgtctggatgtttggacgtcgttggtttcaattgatcaagatgc 618 Query: 434 attctcagctcgggttaggaaacacatggagcaattagctgcact 478 ||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct: 619 attctcagctcgggtcaggaaaaacattgagcaactagctgcact 663
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 117 bits (59), Expect = 8e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagttg 878 |||||||| || |||||||||||||||||||||||||||| |||||||||||| || | | Sbjct: 1279 atatagacgtattttagagtgtagattcactcattttgctccgtatgtagtccatattag 1338 Query: 879 aatctcttaaaagacttttatttagtaaccgagggagta 917 ||||||| ||||||||| ||||||| ||| ||||||||| Sbjct: 1339 aatctctaaaaagacttatatttaggaacagagggagta 1377 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 860 cgtatgtagtccgtagttgaatctcttaaaagacttttatttagtaaccgagggagtat 918 |||||||||||| || | ||||||| ||||||||| ||||||| ||| |||||||||| Sbjct: 1273 cgtatgtagtccatattcaaatctctaaaaagacttatatttaggaacggagggagtat 1215
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 111 bits (56), Expect = 5e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | | Sbjct: 12772 atgtatatagacatattttaaagtgtagattcactcattttgctccgtatgtagtctctt 12713 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| |||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 12712 agtgaaatcgcttaaaagacttatatttaggaacggagggagta 12669
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 111 bits (56), Expect = 5e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt-ccgt 873 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | || | Sbjct: 93832 atgtatatagacatactttagagtgtagattcactcattttgctctgtatgtaatccctt 93773 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| |||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 93772 agtgaaatcgcttaaaagacttatatttaggaacggagggagta 93729 Score = 87.7 bits (44), Expect = 7e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||| |||||| ||||||||||| ||||||||||| || ||||||||| | || Sbjct: 4835 atgtatatatacataccttagagtgtaggctcactcatttttctccgtatgtagcctcta 4776 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagtat 918 || |||||||| ||||||||| ||||||| ||| || ||||||| Sbjct: 4775 gtagaatctctaaaaagacttatatttaggaacggatggagtat 4732 Score = 83.8 bits (42), Expect = 1e-12 Identities = 51/54 (94%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag 868 ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 67888 atgtatatagacatattttagagtgtacattcaatcattttgcttcgtatgtag 67835 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgt 866 |||||||||||||||||||| | | |||||||| ||||||| || ||||||| Sbjct: 55661 atgtatatagacatactttaaaatatagattcattcattttactccgtatgt 55610 Score = 46.1 bits (23), Expect = 0.25 Identities = 38/43 (88%) Strand = Plus / Plus Query: 860 cgtatgtagtccgtagttgaatctcttaaaagacttttattta 902 ||||||||||||||||| ||| |||| |||||||| |||||| Sbjct: 4837 cgtatgtagtccgtagtggaacctctacaaagacttatattta 4879
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 111 bits (56), Expect = 5e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 85295 atgtatatagacatactttagagtgtagatttactcattttgcttcgtatgtagactcct 85354 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagtat 918 | | ||| ||||||||||||| ||||||| ||| |||||||||| Sbjct: 85355 ggtaaatatcttaaaagacttatatttaggaacagagggagtat 85398 Score = 95.6 bits (48), Expect = 3e-16 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 |||||| ||||||||||||| | | || ||||||||||||||||| |||||||||| | | Sbjct: 91741 atgtatttagacatactttaaaatatatattcactcattttgctttgtatgtagtctctt 91800 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagtatttg 921 ||| ||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 91801 agtgaaatttcttaaaagacttatatttaggaacggagggagtatttg 91848
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 111 bits (56), Expect = 5e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt-ccgt 873 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | || | Sbjct: 2077 atgtatatagacatactttagagtgtagattcactcattttgctctgtatgtaatccctt 2136 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| |||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 2137 agtgaaatcgcttaaaagacttatatttaggaacggagggagta 2180
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagttg 878 |||||||| || |||||||||||||||||||||||||||| |||||||||||| || | | Sbjct: 1285 atatagacgtattttagagtgtagattcactcattttgctccgtatgtagtccatattag 1344 Query: 879 aatctcttaaaagacttttatttagtaaccgaggg 913 ||||||| ||||||||| ||||||| ||| ||||| Sbjct: 1345 aatctctaaaaagacttatatttaggaacagaggg 1379
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 103 bits (52), Expect = 1e-18 Identities = 92/104 (88%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgt- 873 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||| || | Sbjct: 47383 atgtatatagacatactttaaagtgttgattcactcattttacttcgtatgtaaaccctt 47324 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| ||||||||||||||||| ||||||| ||| ||||||||| Sbjct: 47323 agtgaaatctcttaaaagacttatatttaggaacggagggagta 47280 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 |||||| ||| |||| ||||| ||||||||||||||||||||| ||||| |||| Sbjct: 61068 atgtatgtagtcatattttaggatgtagattcactcattttgctccgtatctagt 61122
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgt 873 |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | Sbjct: 2300 aatgtatatagacatattttagagtgtagattcactcattttgctccgtatgtagtcact 2359 Query: 874 agttgaatctct 885 ||||||||||| Sbjct: 2360 tgttgaatctct 2371
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 101 bits (51), Expect = 5e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | | Sbjct: 8637 tttagagtgtagattcactcattttgcttcgtatgtagtccatagtgaaatctctacaga 8696 Query: 891 gacttttatttagtaaccgagggagta 917 ||||| ||||||| ||| ||||||||| Sbjct: 8697 gacttatatttaggaacggagggagta 8723
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 99.6 bits (50), Expect = 2e-17 Identities = 90/102 (88%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 818 tatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgtagt 876 ||||||||||||||||| |||| ||||||| |||||||||||||||||||| | | | || Sbjct: 351 tatatagacatactttaaagtgcagattcattcattttgcttcgtatgtagactcttggt 292 Query: 877 tgaatctcttaaaagacttttatttagtaaccgagggagtat 918 ||||||||||||||||| ||||||| ||| |||||||||| Sbjct: 291 gaaatctcttaaaagacttatatttagaaacggagggagtat 250 Score = 46.1 bits (23), Expect = 0.25 Identities = 56/67 (83%) Strand = Plus / Minus Query: 817 gtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagt 876 ||||||||||||| |||| |||||| || ||| |||||||| ||||| |||| ||| | Sbjct: 253 gtatatagacataatttaaagtgtaagttaacttattttgctccgtatatagttggtaat 194 Query: 877 tgaatct 883 ||||||| Sbjct: 193 tgaatct 187
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 97.6 bits (49), Expect = 8e-17 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccgt 873 |||||||||||||||||||||||| |||||||| |||||||||| | ||||||| || | Sbjct: 89246 atgtatatagacatactttagagtatagattcaatcattttgctccatatgtagaccctt 89187 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagtat 918 ||| |||| |||||||||||| ||||||| ||| |||||||||| Sbjct: 89186 agtgaaatcgcttaaaagacttatatttaggaacggagggagtat 89142 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtcc-gt 873 |||||||||||||||||||||||| |||||||| |||||||||| ||||||||| || | Sbjct: 14550 atgtatatagacatactttagagtatagattcaatcattttgctccgtatgtagaccttt 14609 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| ||| |||||||||||| ||||||| ||| |||| |||| Sbjct: 14610 agtgaaattgcttaaaagacttatatttaggaacggaggaagta 14653 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtcc 871 |||||| |||||||| | ||||||||||||||||||||||| || |||||| ||||| Sbjct: 83525 atgtatgtagacatattctagagtgtagattcactcattttactccgtatgcagtcc 83581 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Plus Query: 838 tgtagattcactcattttgcttcgtatgtagtc 870 |||| |||||||||||||||| ||||||||||| Sbjct: 66688 tgtaaattcactcattttgctccgtatgtagtc 66720
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 97.6 bits (49), Expect = 8e-17 Identities = 89/101 (88%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | | | Sbjct: 50528 atgtatatagacatattttaaagtgtagattcactcattttgcttcgtatgtagactcct 50587 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgaggga 914 ||| ||| ||||||||||||| ||| ||| ||| |||||| Sbjct: 50588 agtgaaatatcttaaaagacttatatctaggaacggaggga 50628
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 95.6 bits (48), Expect = 3e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 811 acaaatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 32275 acaaatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtc 32216 Score = 58.0 bits (29), Expect = 7e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 818 tatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||| || |||| ||||| ||||| |||||||||||||||||||||| Sbjct: 17019 tatatagacgtattttaaagtgtgtattcattcattttgcttcgtatgtagtc 17071
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 95.6 bits (48), Expect = 3e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 70014 atgtatatagacatattttagagtgtagattcactcattttgctccgtatgtagtc 70069
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 95.6 bits (48), Expect = 3e-16 Identities = 91/104 (87%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 |||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||| | Sbjct: 1720 atgtatgtagacatactttagagtgtatattcactcattttgctttgtatttagtcatct 1779 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| ||| ||||||||||||| ||||||| ||| ||||||||| Sbjct: 1780 agtgaaatatcttaaaagacttatatttaggaacggagggagta 1823
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 93.7 bits (47), Expect = 1e-15 Identities = 89/103 (86%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 7504 atgtatataaccatactttagaatgtagattaactcattttgcttcgtatgtagtctata 7445 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagta 917 || ||||| | ||| ||||| ||||||| ||| ||||||||| Sbjct: 7444 gtgaaatctttaaaaggacttgtatttaggaacggagggagta 7402 Score = 46.1 bits (23), Expect = 0.25 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 861 gtatgtagtccgtagttgaatctc-ttaaaagacttttatttagtaaccgagggagtat 918 ||||||||||| |||| ||||||| ||||||||| ||||||| ||| |||||||||| Sbjct: 7507 gtatgtagtccatagtggaatctcaaaaaaagacttatatttaggaacggagggagtat 7565
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 89.7 bits (45), Expect = 2e-14 Identities = 89/103 (86%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||| || Sbjct: 3661 atgtatatagacatactt---agtgtaggttcactcattttgctccgtatatagtccata 3605 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagta 917 || |||||||| ||| |||| |||| || ||||||||||||| Sbjct: 3604 gtggaatctctagaaatacttatattaaggaaccgagggagta 3562 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 860 cgtatgtagtccgtagttgaatctcttaaaagacttttatttagtaaccgagggagta 917 |||||||||||| |||| |||| || ||||||||| ||||||| ||| ||||||||| Sbjct: 3663 cgtatgtagtccatagtggaatgtcgaaaaagacttgtatttaggaacggagggagta 3720
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 87.7 bits (44), Expect = 7e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| Sbjct: 172957 atgtatatagacatattttagagtgtagattcactcattttgttccgtatgtagtc 172902 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 823 agacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||| ||||||||||||||||||| |||||||| |||||||||| Sbjct: 154845 agacatagtttagagtgtagattcacttattttgctccgtatgtagt 154891 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 837 gtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaagacttt 896 ||||||||||||||||||| || ||||||| ||| |||| ||||||| |||||||| Sbjct: 152168 gtgtagattcactcatttttctccgtatgtggtctatagtgaaatctctccaaagactta 152109 Query: 897 tatttagtaaccgagggagta 917 ||||||| ||| ||||||||| Sbjct: 152108 tatttaggaacggagggagta 152088
>gb|DQ995511.1| Hordeum vulgare clone 509d02_c-84 genomic sequence Length = 13774 Score = 87.7 bits (44), Expect = 7e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||| |||||| ||| |||||| ||||||||||| ||||||||||| || Sbjct: 11087 atgtatatagacataatttagaatgtggattcattcattttgctttgtatgtagtccata 11146 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagtat 918 | |||||||| ||||||| |||||| ||| |||||||||| Sbjct: 11147 gccgaatctctaaaaagacaaatatttaagaacggagggagtat 11190 Score = 71.9 bits (36), Expect = 4e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattt 854 ||||||||||||||||||||||||||| |||||||||||| Sbjct: 9151 atgtatatagacatactttagagtgtatattcactcattt 9112
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 87.7 bits (44), Expect = 7e-14 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccgtagtt 877 ||||||||||| ||||||||||||||||| |||||||||| ||||||||| | | |||| Sbjct: 29898 atatagacatattttagagtgtagattcaatcattttgctccgtatgtagattcttagta 29957 Query: 878 gaatctcttaaaagacttttatttagtaaccgagggagta 917 |||| |||||||||||| ||||||| ||| || |||||| Sbjct: 29958 aaatcgcttaaaagacttatatttagaaacggatggagta 29997 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 ||||||||||||||| |||||| | ||||||||||||||||||| ||||||||||| | Sbjct: 76872 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 76931 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 || ||||||| ||||||||| ||||||| ||| ||||||||| Sbjct: 76932 agcgaaatctctaaaaagacttatatttaggaacggagggagta 76975
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 87.7 bits (44), Expect = 7e-14 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccgtagtt 877 |||||||||||||||||||| |||||||| |||||||||| || |||||| || |||| Sbjct: 73965 atatagacatactttagagtatagattcaatcattttgctccgaatgtagacccttagtg 73906 Query: 878 gaatctcttaaaagacttttatttagtaaccgagggagta 917 |||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 73905 aaatcgcttaaaagacttatatttaggaacggagggagta 73866 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtcc 871 ||||||||||||||| |||| || || ||||||||||||||||||||||||||||| Sbjct: 71794 atgtatatagacatattttaaagcgtgaattcactcattttgcttcgtatgtagtcc 71738
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1021 atgtatgtagacatgttttagagtgtagattcactcattttgctccgtatgtagtcactt 962 Query: 875 gttga-atctcttaaaagacttttatttagtaaccgagggagta 917 ||||| |||||| |||||| |||||||| ||| ||||||||| Sbjct: 961 gttgagatctctagaaagacaattatttaggaacggagggagta 918
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1021 atgtatgtagacatgttttagagtgtagattcactcattttgctccgtatgtagtcactt 962 Query: 875 gttga-atctcttaaaagacttttatttagtaaccgagggagta 917 ||||| |||||| |||||| |||||||| ||| ||||||||| Sbjct: 961 gttgagatctctagaaagacaattatttaggaacggagggagta 918
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccgt 873 ||||||||||||||| |||||||||||||||||||||||||| | ||||||||| | | | Sbjct: 8425 atgtatatagacatattttagagtgtagattcactcattttggtccgtatgtagattctt 8484 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 ||| ||| |||| |||||||| ||||||| ||| || |||||| Sbjct: 8485 agtgaaatatctttaaagacttatatttaggaacggatggagta 8528 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 811 acaaatgtatatagacatactttagagtgtagattcactcattt 854 ||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 8288 acaaatgtatatagacatattttagagtgtagattcactaattt 8331 Score = 42.1 bits (21), Expect = 4.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 879 aatctcttaaaagacttttatttagtaaccgagggagtatt 919 ||||||| ||||| ||| ||||||| ||| ||||||||||| Sbjct: 308 aatctctaaaaagtcttatatttaggaacggagggagtatt 348
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 87.7 bits (44), Expect = 7e-14 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccgtagtt 877 |||||||||||||||||||| |||||||| |||||||||| || |||||| || |||| Sbjct: 916 atatagacatactttagagtatagattcaatcattttgctccgaatgtagacccttagtg 857 Query: 878 gaatctcttaaaagacttttatttagtaaccgagggagta 917 |||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 856 aaatcgcttaaaagacttatatttaggaacggagggagta 817
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 87.7 bits (44), Expect = 7e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| Sbjct: 7764 atgtatatagacacattttagagtgtagattcactcattttgctccgtatgtagtc 7819
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 87.7 bits (44), Expect = 7e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 5425 atgtacatagacatattttagagtatagattcactcattttgcttcgtatgtagtc 5480 Score = 60.0 bits (30), Expect = 2e-05 Identities = 88/106 (83%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 |||||||| |||||||||| || || | ||||| |||||| || ||||||||||| | | Sbjct: 21917 atgtatatggacatactttggaatgcacattcatgcattttactacgtatgtagtcactt 21976 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagtatt 919 ||| ||||||| ||||||||| ||||||| | | ||||||||||| Sbjct: 21977 agtgaaatctctaaaaagacttatatttaggatcggagggagtatt 22022
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 87.7 bits (44), Expect = 7e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| Sbjct: 977 atgtatatagacatattttagagtgtagattaactcattttacttcgtatgtagtc 1032
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 87.7 bits (44), Expect = 7e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||||||||| || |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 486 atgtatatagacgtattttagagtgtagattcactcattttgctccgtatatagtcactt 427 Query: 875 gttg-aatctcttaaaagacttttatttagtaaccgagggagta 917 |||| ||||||| |||||| | ||||||| ||| ||||||||| Sbjct: 426 gttgaaatctctacaaagacctatatttaggaacggagggagta 383
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 87.7 bits (44), Expect = 7e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgt 873 |||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2239 aatgtatatagatgtattttagagtgtagattcactcattttgcttcttatgtagtccgc 2298 Query: 874 agttgaatctct 885 | ||| |||||| Sbjct: 2299 atttggatctct 2310
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 85.7 bits (43), Expect = 3e-13 Identities = 71/79 (89%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt-ccgt 873 |||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||| || | Sbjct: 17184 atgtatatagacatgctttaaagtatagattcactcactttgcttcgtatgtagtcccct 17125 Query: 874 agttgaatctcttaaaaga 892 ||| |||||||| |||||| Sbjct: 17124 agtggaatctctaaaaaga 17106
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 85.7 bits (43), Expect = 3e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||||||||||| |||||||||||||||||||||||||| | |||||||||| Sbjct: 173021 atgtatatagacataatttagagtgtagattcactcattttgttccgtatgtagt 172967
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Minus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 |||||||||||||||||||||||||||| |||||||||||| || ||| |||| |||| Sbjct: 56864 tttagagtgtagattcactcattttgctccgtatgtagtccatatcggaaactctgaaaa 56805 Query: 891 gacttttatttagtaaccgagggagt 916 | ||| ||||||| ||| |||||||| Sbjct: 56804 ggcttatatttaggaacggagggagt 56779 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgct 858 |||||||||||||||| |||||||| || |||||||||| ||||| Sbjct: 59945 aatgtatatagacataatttagagtataaattcactcatgttgct 59989 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcat 852 ||||||||| ||||| |||| ||| ||||||||||||| Sbjct: 49475 atgtatataaacatattttaaagtatagattcactcat 49512
>gb|DQ995510.1| Hordeum vulgare clone 509d02_c-83 genomic sequence Length = 10179 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||| Sbjct: 8268 aatgtatatagacatattttagagtatagattcactcgttttgctccgtatgtagtc 8324 Score = 79.8 bits (40), Expect = 2e-11 Identities = 89/104 (85%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgt 873 ||||||||||||||| ||||||||||||||||| ||||||| || ||||||||| | | | Sbjct: 8105 atgtatatagacatattttagagtgtagattcattcattttactccgtatgtagactcct 8046 Query: 874 agttgaatctcttaaaagacttttatttagtaaccgagggagta 917 | | ||| ||||||||||||| |||||| ||| ||||||||| Sbjct: 8045 aatgaaatatcttaaaagacttatatttaaaaacggagggagta 8002 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Minus Query: 814 aatgtatatagacatactttagagtgtagattcactcatttt 855 |||||||||||| ||| ||||||||||||| ||| ||||||| Sbjct: 9373 aatgtatatagatatattttagagtgtagaatcattcatttt 9332
>emb|CT009735.1| Triticum aestivum Length = 187340 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 822 tagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 76297 tagacatattttagagtgtagattcactcattttgctccgtatgtagtc 76345
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 81.8 bits (41), Expect = 5e-12 Identities = 84/97 (86%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 822 tagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagtt-gaa 880 |||||||| |||||||||||||| ||||||||||||| ||||||||||| | ||| ||| Sbjct: 1309 tagacatattttagagtgtagatacactcattttgctccgtatgtagtcacttgttggaa 1250 Query: 881 tctcttaaaagacttttatttagtaaccgagggagta 917 ||||| |||||||| ||||| | ||| ||||||||| Sbjct: 1249 tctctagaaagacttatatttgggaacagagggagta 1213
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 822 tagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 49980 tagacatattttagagtgtagattcactcattttgctccgtatgtagtc 50028
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 81.8 bits (41), Expect = 5e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag-tccg 872 |||||||||| ||||| |||||| ||||||||||||||||||||| |||||||| || Sbjct: 23378 aatgtatataaacatattttagaatgtagattcactcattttgctctgtatgtagatcat 23319 Query: 873 tagttgaatctcttaaaagacttttatttagtaaccgagggagta 917 |||| ||| |||||||||||| ||||||| ||| ||||||||| Sbjct: 23318 tagtgaaattccttaaaagacttatatttaggaacggagggagta 23274
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 81.8 bits (41), Expect = 5e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cg 872 |||||||||||||||| ||||||||||| ||||| |||||||| | ||||||||| | || Sbjct: 30333 aatgtatatagacatattttagagtgtatattcaatcattttgttccgtatgtagacacg 30392 Query: 873 tagttgaatctcttaaaagacttttatttagtaaccgagggagta 917 |||| |||| ||||||| |||| ||||| | ||| ||||||||| Sbjct: 30393 tagtaaaatcgcttaaaaaacttatatttcggaacggagggagta 30437 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 879 aatctcttaaaagacttttatttagtaaccgagggagta 917 ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 143693 aatctcttaaaagacttatatttagtaacggagggagta 143731 Score = 60.0 bits (30), Expect = 2e-05 Identities = 87/106 (82%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||||||||||| || ||||| | ||||| ||||||||| | || | Sbjct: 197594 atgtatatagacatactttagagcatacattcaattattttatttcgtatgttgaccctt 197535 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagtattt 920 | |||| |||||||||||| ||||||| || |||||||||||| Sbjct: 197534 agtaaatcgcttaaaagacttatatttagggacggagggagtattt 197489 Score = 60.0 bits (30), Expect = 2e-05 Identities = 85/102 (83%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 818 tatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgtagt 876 |||||||||||| |||||| | || ||||| | ||||| ||||||||||||| | |||| Sbjct: 208403 tatatagacatattttagaatatacattcatttattttatttcgtatgtagtcacttagt 208462 Query: 877 tgaatctcttaaaagacttttatttagtaaccgagggagtat 918 ||||||| |||||| || ||||||| ||| |||||||||| Sbjct: 208463 aaaatctctaaaaagatttatatttagaaacggagggagtat 208504
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 81.8 bits (41), Expect = 5e-12 Identities = 90/105 (85%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||||||||||||||||||||| || ||||| || ||||||||| | Sbjct: 6258 atgtatatagacatactttagagtgtagattcattctttttgttttgtatgtagtttctt 6317 Query: 875 gttg-aatctcttaaaagacttttatttagtaaccgagggagtat 918 | || |||| |||||||||||| |||||| ||| |||||||||| Sbjct: 6318 gatgaaatcgcttaaaagacttatatttaagaacagagggagtat 6362
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 81.8 bits (41), Expect = 5e-12 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgtagtt 877 |||||||||||||||| | |||||||| |||||||||||| ||||||||| | |||| Sbjct: 488 atatagacatactttacaatgtagattaactcattttgctccgtatgtagacttctagtg 429 Query: 878 gaatctcttaaaagacttttatttagtaaccgagggagtat 918 ||| ||||||||||||| ||||||| ||| |||||||||| Sbjct: 428 aaatatcttaaaagacttatatttagaaacggagggagtat 388
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 81.8 bits (41), Expect = 5e-12 Identities = 88/103 (85%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 |||||||||||||||||| ||||||| ||||||||||||||| ||||| | |||| || Sbjct: 3601 atgtatatagacatactt---agtgtaggttcactcattttgctccgtatatggtccata 3545 Query: 875 gttgaatctcttaaaagacttttatttagtaaccgagggagta 917 || |||||||| ||| |||| |||| || ||||||||||||| Sbjct: 3544 gtggaatctctagaaatacttatattaaggaaccgagggagta 3502 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 860 cgtatgtagtccgtagttgaatctcttaaaagacttttatttagtaaccgagggagta 917 |||||||||||| |||| |||| || ||||||||| ||||||| ||| ||||||||| Sbjct: 3603 cgtatgtagtccatagtggaatgtcgaaaaagacttatatttaggaacggagggagta 3660
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 79.8 bits (40), Expect = 2e-11 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 817 gtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccg-tag 875 |||| |||||||||||||||||||| ||| | ||||||| |||||||||||| || ||| Sbjct: 69696 gtatgtagacatactttagagtgtaaatttattcattttatttcgtatgtagttcgctag 69755 Query: 876 ttgaatctcttaaaagacttttatttagtaaccgagggag 915 | ||||||||||||||| ||||||||| ||| ||||||| Sbjct: 69756 taaaatctcttaaaagac-tttatttagaaacggagggag 69794 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagt 838 |||||||||||||||||||||||| Sbjct: 52414 atgtatatagacatactttagagt 52391
>dbj|AB272098.1| Triticum aestivum DNA, waxy gene related sequence Length = 1852 Score = 77.8 bits (39), Expect = 7e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 |||||||||||||||||||||||||||| | |||||||| | || | |||||||| |||| Sbjct: 954 tttagagtgtagattcactcattttgctccatatgtagttcctattggaatctctaaaaa 895 Query: 891 gacttttatttagtaaccgagggagta 917 |||| ||||||| ||| |||||||| Sbjct: 894 tacttatatttaggaacgaagggagta 868
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||| ||||||||||||| |||||| ||||||||| | | ||||||||||||||| Sbjct: 2267 atgtatataaacatactttagagagtagatccactcatttggatccgtatgtagtccgta 2326 Query: 875 gt 876 || Sbjct: 2327 gt 2328
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 73.8 bits (37), Expect = 1e-09 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||| | Sbjct: 109241 atgtatatagacatattttagagtgtagattcattcatttttttccgtatgtagtcactt 109182 Query: 875 gttg-aatctcttaaaagacttttatttagtaaccgagggagtat 918 |||| ||||||| |||||| ||||||| ||| |||||||||| Sbjct: 109181 gttgaaatctctagaaagacaaatatttaggaacggagggagtat 109137 Score = 71.9 bits (36), Expect = 4e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 |||||||||||||||||||||||||||| | |||||||||| | || |||||| | ||| Sbjct: 40503 tttagagtgtagattcactcattttgctccatatgtagtccatggtggaatctatacaaa 40562 Query: 891 gacttttatttagtaaccgagggagtat 918 ||||| ||| ||| ||| ||| |||||| Sbjct: 40563 gacttgtatgtaggaacggagagagtat 40590
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 73.8 bits (37), Expect = 1e-09 Identities = 89/105 (84%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||| | Sbjct: 75542 atgtatatagacatattttagagtgtagattcattcatttttttccgtatgtagtcactt 75483 Query: 875 gttg-aatctcttaaaagacttttatttagtaaccgagggagtat 918 |||| ||||||| |||||| ||||||| ||| |||||||||| Sbjct: 75482 gttgaaatctctagaaagacaaatatttaggaacggagggagtat 75438 Score = 69.9 bits (35), Expect = 2e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 |||||||||||||||||||||||||||| | |||||||||| | || |||||| | ||| Sbjct: 6806 tttagagtgtagattcactcattttgctccatatgtagtccatggtggaatctatacaaa 6865 Query: 891 gacttttatttagtaaccgagggagta 917 ||||| ||| ||| ||| ||| ||||| Sbjct: 6866 gacttgtatgtaggaacggagagagta 6892
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 73.8 bits (37), Expect = 1e-09 Identities = 86/101 (85%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc-cgtagtt 877 |||||||||||||||| | |||||||| |||||||||||| ||||||||| | || | Sbjct: 187 atatagacatactttacaatgtagattaactcattttgctccgtatgtagacttctactg 128 Query: 878 gaatctcttaaaagacttttatttagtaaccgagggagtat 918 ||| ||||||||||||| ||||||| ||| |||||||||| Sbjct: 127 aaatatcttaaaagacttatatttagaaacggagggagtat 87
>gb|DQ995512.1| Hordeum vulgare clone 604d05_c-100 genomic sequence Length = 16633 Score = 71.9 bits (36), Expect = 4e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgt 866 |||||||||||||||||||| | | |||||||||| |||||||||||||||| Sbjct: 11913 atgtatatagacatactttaaactatagattcacttattttgcttcgtatgt 11964
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| |||| ||||||| |||| |||||||||||||||| ||||| Sbjct: 27540 atgtatatagacataatttaaagtgtaggttcattcattttgcttcgtatatagtc 27485
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| |||| |||||||||| |||||||||||| |||||||||| Sbjct: 44798 atgtatatagacatattttacagtgtagatttactcattttgctctgtatgtagtc 44743 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||||| |||| |||||||||| |||||||||||| |||||||||| Sbjct: 198552 atgtatatagacatattttacagtgtagatttactcattttgctctgtatgtagtc 198497
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||| |||||||| | ||||||||||| ||| |||||||||||||||||||||||| Sbjct: 11752 atgtttatagacacaatttagagtgtaaatttactcattttgcttcgtatgtagtc 11697 Score = 58.0 bits (29), Expect = 7e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 825 acatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctc 884 ||||| |||| ||| |||||||| | ||||| ||| |||||| || |||||| |||||| Sbjct: 11472 acatattttaaagtatagattcatttattttactttgtatgttgttcgtagtaaaatctc 11531 Query: 885 ttaaaagacttttatttagtaaccgagggagta 917 | |||||||| |||||| ||||||||||||| Sbjct: 11532 taaaaagactaacatttaggaaccgagggagta 11564
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||| |||||||| | |||||| ||||||||||||||||||| ||||||||||| Sbjct: 24813 atgtatgtagacatattctagagtctagattcactcattttgctccgtatgtagtc 24758
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||| ||||||||| |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 5743 atgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtc 5688
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||| ||||||||| | || ||||||||||||||||||||||| ||||||||||| Sbjct: 10446 atgtacatagacatattctaaagtgtagattcactcattttgctccgtatgtagtc 10501
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 820 tatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagttga 879 ||||||| || | |||||||| ||||||||||||||||| |||||||||| |||| | || Sbjct: 300 tatagacgtattctagagtgtggattcactcattttgctccgtatgtagttcgtattaga 359 Query: 880 atctcttaaaa 890 |||||| |||| Sbjct: 360 atctctaaaaa 370
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 67.9 bits (34), Expect = 7e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtat 864 ||||||||||||| | |||||||| ||||||||||||||||||| ||||| Sbjct: 1091 atgtatatagacacattttagagtatagattcactcattttgctccgtat 1140 Score = 48.1 bits (24), Expect = 0.065 Identities = 48/56 (85%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||||| |||| |||| | | || |||||||||||||| | ||||||||||| Sbjct: 1278 atgtatatagtcatattttaaaatatacattcactcattttgttccgtatgtagtc 1333
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 63.9 bits (32), Expect = 1e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 838 tgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaagactttt 897 |||||||||||||||||||||||||| ||||| |||| ||||||| ||| | ||| | Sbjct: 782 tgtagattcactcattttgcttcgtacctagtctatagtgtaatctctaaaaggtcttat 723 Query: 898 atttagtaaccgagggagta 917 |||||| ||| ||||||||| Sbjct: 722 atttaggaacggagggagta 703
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 |||||||||||||||| ||||| ||||| ||||| |||||||| | |||||||||| Sbjct: 427 aatgtatatagacatattttagcgtgtacattcattcattttgttccgtatgtagt 482
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 63.9 bits (32), Expect = 1e-06 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 839 gtagattcactcattttgcttcgtatgtag-tccgtagttgaatctcttaaaagactttt 897 ||||||||| |||||||||| | ||||||| ||| |||| |||| |||||||||||| | Sbjct: 5235 gtagattcaatcattttgctccctatgtagatccttagtgaaatcgcttaaaagacttat 5176 Query: 898 atttagtaaccgagggagta 917 |||||| ||| ||||||||| Sbjct: 5175 atttaggaacggagggagta 5156 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatg 865 |||||||||||||||| ||| |||||||| |||||||||| |||||| Sbjct: 5297 atatagacatactttaaagtatagattcattcattttgctccgtatg 5343
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 63.9 bits (32), Expect = 1e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag 868 ||||||||||||| | ||||||| ||||||||||||||||| | ||||||||| Sbjct: 3945 atgtatatagacacatbttagagtatagattcactcattttgttccgtatgtag 3892
>emb|X58564.1|HVPRP1A H.vulgare mRNA for a pathogenesis-related protein (Hv-1a) Length = 809 Score = 61.9 bits (31), Expect = 4e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtcc-gt 873 |||| |||||| |||||||||||| || ||||||| |||||| ||||||||| |||| | Sbjct: 775 atgtttatagatatactttagagtatacattcacttattttgtttcgtatgttgtccatt 716 Query: 874 agttgaatctcttaaaaga 892 ||| |||||||||||||| Sbjct: 715 agtaaaatctcttaaaaga 697
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 61.9 bits (31), Expect = 4e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 819 atatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||||||| ||||||||||||||||| |||||||| | ||||| |||| Sbjct: 15117 atatagacatattttagagtgtagattcattcattttgttccgtatatagt 15167
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 818 tatatagacatactttagagtgtagattcactcattttg 856 |||||||||||||||||||||||| ||||| |||||||| Sbjct: 1507 tatatagacatactttagagtgtacattcattcattttg 1545
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtag 868 ||||||||||||||| |||| ||| ||| |||| |||||||||| ||||||||| Sbjct: 2295 atgtatatagacatattttaaagtataggttcattcattttgctccgtatgtag 2242
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 840 tagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaagacttttat 899 ||||||||||||||||||| | ||||| ||| || | ||||| ||| |||||||| ||| Sbjct: 23189 tagattcactcattttgctccttatgtggtctataatggaatcacttcaaagacttatat 23130 Query: 900 ttagtaaccgagggagta 917 |||| ||| ||||||||| Sbjct: 23129 ttaggaacggagggagta 23112
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 826 catactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||| ||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 74729 catattttagagtgtagatttactcattttacttcgtacgtagtc 74685
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 826 catactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||| ||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 45488 catattttagagtgtagatttactcattttacttcgtacgtagtc 45444
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||| |||||||| |||| | |||||||||| |||||||| | ||||||||||| Sbjct: 355612 aatgtatgtagacatattttaaaatgtagattcattcattttgttccgtatgtagtc 355556 Score = 42.1 bits (21), Expect = 4.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 887 aaaagacttttatttagtaaccgagggagtatt 919 |||| |||| ||||||||||| ||||||||||| Sbjct: 336094 aaaatacttatatttagtaacagagggagtatt 336062
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 58.0 bits (29), Expect = 7e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtccgtagttgaatctcttaaaa 890 |||||||| ||| |||||||||||| || ||||||| |||| || | ||||| | ||| Sbjct: 2860 tttagagtataggttcactcattttactccgtatgtggtccataatgaaatctgtccaaa 2919 Query: 891 gacttttatttagtaaccgagggagtatt 919 ||||| ||||||| ||| ||||||||||| Sbjct: 2920 gacttatatttaggaacggagggagtatt 2948
>gb|DQ995508.1| Hordeum vulgare clone 509d02_c-18 genomic sequence Length = 17493 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 830 ctttagagtgtagattcactcattttgcttcg 861 ||||||||||||||||||||||||||| |||| Sbjct: 14492 ctttagagtgtagattcactcattttgtttcg 14461
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattt 854 ||||||||||||||| |||||||||||||| || |||||| Sbjct: 902 atgtatatagacatattttagagtgtagatacattcattt 941
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 56.0 bits (28), Expect = 3e-04 Identities = 50/56 (89%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||||||||||| |||| | | |||||||||||||||||||| ||||||||| Sbjct: 178082 aatgtatatagacatcttttaaa-tatagattcactcattttgctttgtatgtagt 178028
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||||||||||| |||| ||| || ||||||| ||||| |||||||||||| Sbjct: 30804 atgtatatagacatattttaaagtatatattcacttgttttgtttcgtatgtagt 30750
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 |||||||||| |||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 483 atgtatatagtcatattttatgatgtagattcactcattttgctctgtatgtagt 537
>emb|X58565.1|HVPRP1C H.vulgare mRNA for a pathogenesis-related protein (Hv-1c) Length = 748 Score = 52.0 bits (26), Expect = 0.004 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 828 tactttagagtgtagattcactcattttgcttcgtatgtagtcc-gtagttgaatctctt 886 ||||||| ||| || ||||||| |||||| |||||||||||||| |||| |||||||| Sbjct: 723 tactttaaagtatacattcacttattttgtttcgtatgtagtccactagtaaaatctctt 664 Query: 887 aaaaga 892 |||||| Sbjct: 663 aaaaga 658
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtat 864 ||||||||||||||| |||| ||| |||||||| | |||||| ||||||| Sbjct: 3808 atgtatatagacatattttaaagtatagattcatttattttgtttcgtat 3857
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 50.1 bits (25), Expect = 0.016 Identities = 73/89 (82%), Gaps = 5/89 (5%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgta 874 ||||||||||||||| | || |||||| ||||| |||||| |||||||||| | || Sbjct: 17265 atgtatatagacatattctaaagtgtacattca-----tttgctccgtatgtagttcata 17211 Query: 875 gttgaatctcttaaaagacttttatttag 903 | |||||||| ||||||||| ||||||| Sbjct: 17210 ttggaatctctaaaaagacttatatttag 17182
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattca 847 ||||||||||||||| |||||| |||||||||| Sbjct: 2096 atgtatatagacatattttagattgtagattca 2064
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 50.1 bits (25), Expect = 0.016 Identities = 52/61 (85%) Strand = Plus / Plus Query: 817 gtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtccgtagt 876 ||||||||||||| |||||| || | ||| || ||||||| ||||||||||||||||| Sbjct: 4028 gtatatagacataatttagaatgcaagttccttcgttttgctccgtatgtagtccgtagt 4087 Query: 877 t 877 | Sbjct: 4088 t 4088
>emb|CT009693.5| Pig DNA sequence from clone PigE-201H15 on chromosome 7, complete sequence Length = 82411 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 27617 tttttattgtgtgtatatatatat 27594
>gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, complete sequence Length = 199385 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 179858 tttttattgtgtgtatatatatat 179835
>emb|BX855604.5| Zebrafish DNA sequence from clone CH211-284P4, complete sequence Length = 152761 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 88796 tttttattgtgtgtatatatatat 88773
>gb|AC125020.7| Mus musculus chromosome 12, clone RP24-181E5, complete sequence Length = 200586 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 178762 tttttattgtgtgtatatatatat 178739
>emb|AL691499.8| Mouse DNA sequence from clone RP23-45O6 on chromosome X, complete sequence Length = 179370 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Plus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 157699 tttttattgtgtgtatatatatat 157722
>emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chromosome 7, complete sequence Length = 222099 Score = 48.1 bits (24), Expect = 0.065 Identities = 24/24 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatat 971 |||||||||||||||||||||||| Sbjct: 201926 tttttattgtgtgtatatatatat 201903
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 48.1 bits (24), Expect = 0.065 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 ||||||||||||| |||||| | | || ||||| |||||||||||||||||||||| Sbjct: 1300 atgtatatagacacactttaaattata-attca-tcattttgcttcgtatgtagtc 1247
>gb|AC026672.44| Homo sapiens 12 BAC RP11-876K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 230392 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatat 971 ||||||||||||||||||||||| Sbjct: 50008 ttttattgtgtgtatatatatat 49986
>emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chromosome 1, complete sequence Length = 181535 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 947 ctttttattgtgtgtatatatat 969 ||||||||||||||||||||||| Sbjct: 26410 ctttttattgtgtgtatatatat 26388
>emb|BX908776.14| Zebrafish DNA sequence from clone DKEY-88E12 in linkage group 3, complete sequence Length = 249946 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatatat 971 ||||||||||||||||||||||| Sbjct: 196302 ttttattgtgtgtatatatatat 196324
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence Length = 150102 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 953 attgtgtgtatatatatatggacaatg 979 |||||||||||||||||||| |||||| Sbjct: 71300 attgtgtgtatatatatatgtacaatg 71326
>emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 in linkage group 13, complete sequence Length = 171465 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatatat 971 ||||||||||||||||||||||| Sbjct: 124893 ttttattgtgtgtatatatatat 124915
>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete sequence Length = 184355 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatat 971 ||||||||||||||||||||||| Sbjct: 90682 ttttattgtgtgtatatatatat 90660
>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete sequence Length = 172149 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatatat 971 ||||||||||||||||||||||| Sbjct: 92112 ttttattgtgtgtatatatatat 92134
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 961 tatatatatatggacaatgagcatata 987 ||||||||||| ||||||||||||||| Sbjct: 91619 tatatatatatagacaatgagcatata 91645
>dbj|D50641.1| Hordeum vulgare Ids1 gene for metallothionein-like protein, complete cds Length = 1819 Score = 46.1 bits (23), Expect = 0.25 Identities = 47/55 (85%) Strand = Plus / Minus Query: 815 atgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagt 869 ||||||||||||||| |||| || || | ||| |||||||||||| |||||||| Sbjct: 420 atgtatatagacatattttaatgtataaaatcaatcattttgcttcatatgtagt 366
>emb|CR933860.7| Zebrafish DNA sequence from clone DKEY-60G10 in linkage group 6, complete sequence Length = 180682 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 179125 tttattgtgtgtatatatatat 179146
>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence Length = 151417 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 21893 tttattgtgtgtatatatatat 21914
>gb|AC004981.2| Homo sapiens PAC clone RP5-1159C10 from 7, complete sequence Length = 149687 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 30151 tgtgtgtatatatatatggaca 30172
>gb|AC157499.2| Pan troglodytes BAC clone CH251-379O4 from chromosome unknown, complete sequence Length = 156656 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 947 ctttttattgtgtgtatatatatatg 972 |||||| ||||||||||||||||||| Sbjct: 128345 cttttttttgtgtgtatatatatatg 128320
>gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, complete sequence Length = 197483 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 148823 tgtgtgtatatatatatggaca 148802
>emb|AL157893.16| Human DNA sequence from clone RP11-322M19 on chromosome 10 Contains the gene for a novel protein highly similar to KIAA2020, two novel genes and a CpG island, complete sequence Length = 162286 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 116937 tttattgtgtgtatatatatat 116958
>emb|CR394554.6| Zebrafish DNA sequence from clone CH211-113B13 in linkage group 25, complete sequence Length = 168993 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 443 tttattgtgtgtatatatatat 464
>gb|AC153940.3| Mus musculus 10 BAC RP24-422N15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142278 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 54572 tgtgtgtatatatatatggaca 54551
>gb|AC155710.5| Mus musculus 10 BAC RP24-141K13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183533 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 155443 tgtgtgtatatatatatggaca 155422
>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the complete sequence Length = 303688 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 16336 tgtgtgtatatatatatggaca 16357
>emb|BX469885.9| Zebrafish DNA sequence from clone DKEY-164N2 in linkage group 19, complete sequence Length = 87215 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 50467 tttattgtgtgtatatatatat 50446
>gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B sequence Length = 110434 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggaca 976 |||||||||||||||||||||| Sbjct: 42996 tgtgtgtatatatatatggaca 43017
>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete sequence Length = 186276 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 950 tttattgtgtgtatatatatat 971 |||||||||||||||||||||| Sbjct: 70218 tttattgtgtgtatatatatat 70197
>emb|CT827959.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0303G06, complete sequence Length = 108846 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 81533 tttttttgtgtgtatatatatatgg 81509
>ref|NM_001060501.1| Oryza sativa (japonica cultivar-group) Os04g0629300 (Os04g0629300) mRNA, complete cds Length = 3800 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 3737 tttttttgtgtgtatatatatatgg 3761
>gb|AC185137.2| Pan troglodytes BAC clone CH251-316O19 from chromosome 9, complete sequence Length = 195242 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 116793 ttattgtgtgtatatatatat 116773
>gb|AC189732.2| Canis Familiaris, clone XX-68P11, complete sequence Length = 218325 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 65452 ttattgtgtgtatatatatat 65472
>gb|AC187623.2| Pan troglodytes BAC clone CH251-430E18 from chromosome 7, complete sequence Length = 179436 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 167598 ggaaggaagaaggaaggcagg 167578
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 26893 tttttttgtgtgtatatatatatgg 26869
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 42.1 bits (21), Expect = 4.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 814 aatgtatatagacatactttagagtgtagattcactcattttgcttcgtatgtagtc 870 |||||||||||||||| |||| | | |||||||| | |||| |||| |||| ||||| Sbjct: 148666 aatgtatatagacatagtttaaattatagattcatttatttcgctttgtatatagtc 148610
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 57029 ggaaggaagaaggaaggcagg 57009
>gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete sequence Length = 131025 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 953 attgtgtgtatatatatatgg 973 ||||||||||||||||||||| Sbjct: 30204 attgtgtgtatatatatatgg 30224
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence Length = 168986 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 74953 ggaaggaagaaggaaggcagg 74933
>gb|AF165140.3| Homo sapiens chromosome 8 clone CTA-398G7 map p12, complete sequence Length = 114898 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 ||||| ||||||||||||||||||| Sbjct: 96325 ttttttttgtgtgtatatatatatg 96301
>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence Length = 134901 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 953 attgtgtgtatatatatatgg 973 ||||||||||||||||||||| Sbjct: 127695 attgtgtgtatatatatatgg 127675
>gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosome 12, complete sequence Length = 203150 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 ||||||||||||||||||| ||||| Sbjct: 149610 tttttattgtgtgtatataaatatg 149586
>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence Length = 168983 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 954 ttgtgtgtatatatatatgga 974 ||||||||||||||||||||| Sbjct: 113527 ttgtgtgtatatatatatgga 113507
>gb|AC124572.4| Mus musculus BAC clone RP23-159A20 from 12, complete sequence Length = 170191 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 ||||||||||||||||||| ||||| Sbjct: 820 tttttattgtgtgtatataaatatg 796
>gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, complete sequence Length = 167484 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 90367 ggaaggaagaaggaaggcagg 90347
>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence Length = 179810 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 153660 tattgtgtgtatatatatatg 153640
>gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complete sequence Length = 159044 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 83882 ggaaggaagaaggaaggcagg 83862
>gb|AC004885.2| Homo sapiens PAC clone RP4-781A18 from 7, complete sequence Length = 190842 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 ||||| ||||||||||||||||||| Sbjct: 177705 ttttttttgtgtgtatatatatatg 177681
>gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, complete sequence Length = 187150 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 698 actgttatttggtgtctatat 718 ||||||||||||||||||||| Sbjct: 111053 actgttatttggtgtctatat 111033
>gb|AC110014.4| Homo sapiens chromosome 18, clone CTC-782O7, complete sequence Length = 148075 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatat 969 ||||||||||||||||||||| Sbjct: 89624 ttttattgtgtgtatatatat 89644
>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160943 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 123499 tattgtgtgtatatatatatg 123479
>gb|AC108688.5| Homo sapiens 3 BAC RP11-775J23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183336 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 955 tgtgtgtatatatatatggac 975 ||||||||||||||||||||| Sbjct: 150002 tgtgtgtatatatatatggac 149982
>gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, complete sequence Length = 170940 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 5022 tattgtgtgtatatatatatg 5002
>gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, complete sequence Length = 181694 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 58221 tattgtgtgtatatatatatg 58201
>gb|AC091554.5| Homo sapiens chromosome 8, clone RP11-155P23, complete sequence Length = 149318 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 2287 tattgtgtgtatatatatatg 2307
>gb|AC073683.3| Mus musculus chromosome 17 clone RP23-124G7, complete sequence Length = 213137 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gaaggaagaaggaaggcaggt 337 ||||||||||||||||||||| Sbjct: 84980 gaaggaagaaggaaggcaggt 84960
>gb|AC113420.2| Homo sapiens chromosome 5 clone RP11-586E1, complete sequence Length = 176267 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 14947 tattgtgtgtatatatatatg 14967
>gb|AC093601.4| Homo sapiens BAC clone RP11-338P22 from 4, complete sequence Length = 118129 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 gggaaggaagaaggaaggcag 335 ||||||||||||||||||||| Sbjct: 1012 gggaaggaagaaggaaggcag 1032
>gb|AC096750.3| Homo sapiens BAC clone RP11-426F15 from 4, complete sequence Length = 159618 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 11602 ttattgtgtgtatatatatat 11582
>gb|AC098862.3| Homo sapiens BAC clone RP11-339D20 from 4, complete sequence Length = 122969 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 6381 tattgtgtgtatatatatatg 6401
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 32043519 tttttttgtgtgtatatatatatgg 32043495
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10, complete sequence Length = 121560 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatat 969 ||||||||||||||||||||| Sbjct: 56204 ttttattgtgtgtatatatat 56184
>gb|AC068280.7| Homo sapiens BAC clone RP11-171H18 from 2, complete sequence Length = 92487 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 446 ggaaggaagaaggaaggcagg 426
>emb|AL772260.3| Human DNA sequence from clone RP11-191G24 on chromosome 1 Contains the 3' end of a novel gene, a calreticulin pseudogene and the 5' end of the OSBPL9 gene for oxysterol binding protein-like 9, complete sequence Length = 95982 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 40134 tattgtgtgtatatatatatg 40114
>emb|AL662924.24| Human DNA sequence from clone RP11-108J9 on chromosome 1 Contains the 3' end of the CLIC4 gene for chloride intracellular channel 4 and three CpG islands, complete sequence Length = 82931 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 25787 ggaaggaagaaggaaggcagg 25807
>emb|AL391989.9| Human DNA sequence from clone RP11-388E20 on chromosome 13 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 167496 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 35549 ttattgtgtgtatatatatat 35529
>emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on chromosome 10 Contains part of the CACNB2 gene for calcium channel voltage-dependent beta 2 subunit and a novel gene, complete sequence Length = 177656 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 60306 ttattgtgtgtatatatatat 60286
>emb|AL356787.11| Human DNA sequence from clone RP11-398I24 on chromosome 6, complete sequence Length = 44801 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 1163 tattgtgtgtatatatatatg 1143
>gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence Length = 155926 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 ||||| ||||||||||||||||||| Sbjct: 120419 ttttttttgtgtgtatatatatatg 120395
>emb|AL161419.15| Human DNA sequence from clone RP11-149J12 on chromosome 13, complete sequence Length = 95734 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 62721 ttattgtgtgtatatatatat 62701
>emb|AL136358.13| Human DNA sequence from clone RP11-183L8 on chromosome 13 Contains the 5' end of the LHFP gene for lipoma HMGIC fusion partner and a CpG island, complete sequence Length = 120507 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 54678 ttattgtgtgtatatatatat 54698
>emb|AL109654.22|HSG278N14 Human DNA sequence from clone GS1-278N14 on chromosome Xq27.3-28, complete sequence Length = 182150 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 137927 tattgtgtgtatatatatatg 137907
>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence Length = 133085 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 948 tttttattgtgtgtatatatatatg 972 ||||| ||||||||||||||||||| Sbjct: 62973 ttttttttgtgtgtatatatatatg 62997
>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence Length = 210112 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 85148 ttattgtgtgtatatatatat 85128
>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence Length = 184635 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 141081 tattgtgtgtatatatatatg 141101
>emb|BX088686.5| Zebrafish DNA sequence from clone CH211-157M21 in linkage group 20, complete sequence Length = 102917 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatatatatg 972 |||||| |||||||||||||||||| Sbjct: 86109 tttttagtgtgtgtatatatatatg 86085
>gb|AF015720.2|AF015720 Homo sapiens chromosome 21 clone PAC clone P169K17 map 21q22.2, complete sequence Length = 179544 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 67349 ggaaggaagaaggaaggcagg 67369
>gb|AC112996.16| Mus musculus chromosome 3, clone RP24-482I9, complete sequence Length = 157999 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 770 gagctgcaaggaaatgtgctg 790 ||||||||||||||||||||| Sbjct: 133250 gagctgcaaggaaatgtgctg 133270
>gb|AC131943.1| Homo sapiens BAC clone CTD-2242C10 from 4, complete sequence Length = 135585 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 gggaaggaagaaggaaggcag 335 ||||||||||||||||||||| Sbjct: 134597 gggaaggaagaaggaaggcag 134617
>gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, complete sequence Length = 160763 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 140357 ttattgtgtgtatatatatat 140337
>gb|AC012594.7| Homo sapiens BAC clone RP11-519L16 from 2, complete sequence Length = 166702 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 165148 ggaaggaagaaggaaggcagg 165128
>gb|AC073928.5| Homo sapiens BAC clone RP11-745P9 from 2, complete sequence Length = 138943 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 947 ctttttattgtgtgtatatatatat 971 |||||| |||||||||||||||||| Sbjct: 95251 cttttttttgtgtgtatatatatat 95227
>dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N23, TM0490, complete sequence Length = 110636 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 896 ttatttagtaaccgagggagtatttggtt 924 |||||||| ||| |||||||||||||||| Sbjct: 42251 ttatttaggaacggagggagtatttggtt 42223
>gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete sequence Length = 56862 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 41986 ggaaggaagaaggaaggcagg 42006
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 42.1 bits (21), Expect = 4.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 831 tttagagtgtagattcactcattttgcttcgtatgtagtcc 871 |||||| |||| |||||||||||||| | | |||||||||| Sbjct: 54202 tttagattgtaaattcactcattttgttccatatgtagtcc 54242
>dbj|AK102284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089H07, full insert sequence Length = 3801 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 3738 tttttttgtgtgtatatatatatgg 3762
>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20, complete sequence Length = 165089 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggac 975 ||||||||||||||||||||| Sbjct: 120296 tgtgtgtatatatatatggac 120316
>emb|BX324175.6| Zebrafish DNA sequence from clone DKEY-237M7 in linkage group 22, complete sequence Length = 222879 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggac 975 ||||||||||||||||||||| Sbjct: 140736 tgtgtgtatatatatatggac 140756
>emb|BX649526.2| Mouse DNA sequence from clone RP23-227O6 on chromosome 2, complete sequence Length = 35131 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 947 ctttttattgtgtgtatatatatat 971 ||||||||||||||| ||||||||| Sbjct: 31714 ctttttattgtgtgtgtatatatat 31690
>gb|AC005233.2|AC005233 Homo sapiens PAC clone RP5-1198O21 from Ch22, complete sequence Length = 64359 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 50740 ggaaggaagaaggaaggcagg 50720
>emb|AJ229041.1|HS229041 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22; segment 1/3 Length = 323000 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 241892 ggaaggaagaaggaaggcagg 241872
>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 Length = 340000 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ggaaggaagaaggaaggcagg 336 ||||||||||||||||||||| Sbjct: 280135 ggaaggaagaaggaaggcagg 280155
>emb|BX324180.4| Zebrafish DNA sequence from clone CH211-134O13 in linkage group 22, complete sequence Length = 136724 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 tgtgtgtatatatatatggac 975 ||||||||||||||||||||| Sbjct: 38681 tgtgtgtatatatatatggac 38701
>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208222 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 agagctaggattctaccagggctgc 392 ||||| ||||||||||||||||||| Sbjct: 150435 agagccaggattctaccagggctgc 150459
>emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on chromosome 2, complete sequence Length = 197191 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 107993 tattgtgtgtatatatatatg 107973
>emb|AL845354.13| Mouse DNA sequence from clone RP23-318L10 on chromosome 2, complete sequence Length = 178468 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 954 ttgtgtgtatatatatatgga 974 ||||||||||||||||||||| Sbjct: 161178 ttgtgtgtatatatatatgga 161198
>gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, complete sequence Length = 160757 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 50107 ttattgtgtgtatatatatat 50127
>gb|AC140226.6| Mus musculus BAC clone RP24-487E24 from 3, complete sequence Length = 206882 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 957 tgtgtatatatatatggacaa 977 ||||||||||||||||||||| Sbjct: 181284 tgtgtatatatatatggacaa 181264
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 ttttattgtgtgtatatatatatgg 973 |||| |||||||||||||||||||| Sbjct: 64226 tttttttgtgtgtatatatatatgg 64202
>gb|AC112265.5| Mus musculus BAC clone RP23-421N20 from 10, complete sequence Length = 203204 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 tattgtgtgtatatatatatg 972 ||||||||||||||||||||| Sbjct: 58271 tattgtgtgtatatatatatg 58291
>gb|AC159253.3| Mus musculus BAC clone RP24-110K11 from chromosome 3, complete sequence Length = 197735 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 957 tgtgtatatatatatggacaa 977 ||||||||||||||||||||| Sbjct: 149075 tgtgtatatatatatggacaa 149095
>emb|AL935188.7| Zebrafish DNA sequence from clone CH211-243G6, complete sequence Length = 160946 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 948 tttttattgtgtgtatatata 968 ||||||||||||||||||||| Sbjct: 125953 tttttattgtgtgtatatata 125933
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 954 ttgtgtgtatatatatatggacaat 978 ||||||||||||||||||| ||||| Sbjct: 5973 ttgtgtgtatatatatatgcacaat 5997
>gb|AC139326.5| Mus musculus BAC clone RP24-341F20 from chromosome 3, complete sequence Length = 141290 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 770 gagctgcaaggaaatgtgctg 790 ||||||||||||||||||||| Sbjct: 13260 gagctgcaaggaaatgtgctg 13280
>gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, complete sequence Length = 188552 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 951 ttattgtgtgtatatatatat 971 ||||||||||||||||||||| Sbjct: 112445 ttattgtgtgtatatatatat 112425 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 215,541,252 Number of extensions: 20974504 Number of successful extensions: 428204 Number of sequences better than 10.0: 193 Number of HSP's gapped: 428182 Number of HSP's successfully gapped: 254 Length of query: 1053 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1030 Effective length of database: 18,503,978,556 Effective search space: 19059097912680 Effective search space used: 19059097912680 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
