ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf117e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054960.1| Oryza sativa (japonica cultivar-group) Os02g0803300 (Os02g0803300) mRNA, complete cds Length = 2175 Score = 412 bits (208), Expect = e-111 Identities = 774/964 (80%), Gaps = 9/964 (0%) Strand = Plus / Plus Query: 312 agcatcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtg 371 ||||||||||||||||| || ||||| |||||| | || ||||| ||||| || |||||| Sbjct: 190 agcatcaggaagtatgttggagccctaaaggacacaacaaccgtaagcatagcaaaagtg 249 Query: 372 aacagcgactacaagcaactggacatcgccatcgtcaaggccaccaaccatgtggagcgg 431 |||||||| || ||| | |||| || || || || |||||||| |||||||| ||| Sbjct: 250 aacagcgattataaggatttggatattgctattgtgaaggccacaaaccatgtcgagaat 309 Query: 432 cctgcaaaggagaagtacatcagagatatcttcatgcatctcaattccgggagggctcgc 491 | |||||||||||||||| ||||||||||| |||||| | | || |||||||| Sbjct: 310 ctaccaaaggagaagtacataagagatatcttttatcatctctctgctggaagggctcga 369 Query: 492 gcggacgtggcctactgcatccgcgccctcgccagacgcctctccaagacgcgcaactgg 551 || || || || ||||||||||| || || | || || || || ||||| ||||||||| Sbjct: 370 gcagatgtagcatactgcatccgtgctcttggtaggcgtctttcaaagacacgcaactgg 429 Query: 552 gcggttgcactcaagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttct 611 ||||||||||| ||||| |||| || |||||||||||||| || || || || || || Sbjct: 430 gcggttgcacttaagaccttaatcgtcatacaccgtgccctacgggaagttgatcccact 489 Query: 612 ttccgtgatgagctcatcagttacggaagatctagcggccaaatgctacacatgtcctat 671 ||||||||||||||||| || || |||||||| || || ||||| || ||||||| Sbjct: 490 ttccgtgatgagctcattagctatggaagatccagtacacatatgcttcatttgtcctac 549 Query: 672 ttcaaagatgactccagccctgatgcttgggatcactccgcgtgggtgcgcaattacgct 731 || || ||||| || || | || ||||||||| | || || ||||| |||||||| || Sbjct: 550 tttaaggatgattcaagtgcagaagcttgggattattctgcatgggttcgcaattatgca 609 Query: 732 ttgtttttggaagagaggctcgaatctttccgtgtgctgaattatgacgtcgaactggat 791 |||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||| Sbjct: 610 ttgtacttagaagagagactagaatctttccgtgtactgaaatatgacgttgaaaaagat 669 Query: 792 ccattgggaacacgagatgttgatacaactggtttgcttgcacaactgccggcattgtcg 851 ||| | |||| ||||| | || || ||||||||||| ||||||||| ||| | | Sbjct: 670 ccaccgagaactcgagacctcgacacggttggtttgcttgaacaactgccagcactacag 729 Query: 852 cagcttctttttcggctaatcagttgtcagccgcatgggtcgtcatcttataacaccata 911 |||||||||||||||||| || |||| ||||| || ||||| ||||||||||||| |||| Sbjct: 730 cagcttctttttcggctactcggttgccagccacaagggtcatcatcttataacaacata 789 Query: 912 atccagcatgcccttgcaatggttgctacggagagtattaggatccagacagccatcaat 971 ||||||||||| ||| ||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 790 atccagcatgcactttcaatggttgctctagagagtgttaggatccatacagctatcaac 849 Query: 972 gatggcatactcaatctagttgacaagttcttcgatatgcaaagggacgacgctattagg 1031 ||||| ||||| ||||| |||||||||||||| || ||||||||||| || ||| |||| Sbjct: 850 gatgggatactgaatctggttgacaagttctttgagatgcaaagggatgatgctcttaga 909 Query: 1032 gcccttgatatatacaaaaaagcacttaagcaggcagggcaactttctggattttacgag 1091 |||||||| ||| ||||| |||| |||| ||||| || |||||||||| |||||| || Sbjct: 910 gcccttgacttattcaaaagagcaattaaccaggcgggacaactttctgaattttatgaa 969 Query: 1092 acgtgtagaaccatacatattgggcggggtgagaagctgttaacaatcgaacagcctcct 1151 | ||||| |||||||||||||||||| || |||| | | |||| ||| |||| |||||| Sbjct: 970 atgtgtaaaaccatacatattgggcgtggcgagaggttcttaaaaattgaactgcctccg 1029 Query: 1152 gcgtcattcttgcaagccatggaagattatgtgagagatgctcctcttgcttcaaaa--- 1208 | |||||| ||||||| ||||| || |||||||||||||| || |||||||||| | Sbjct: 1030 acctcattcctgcaagctatggaggagtatgtgagagatgcaccccttgcttcaataaac 1089 Query: 1209 ------aatcaggctgtactggcaatagagtacaacagaaaaccagaagaggaagaagca 1262 |||||||||||||| |||||||||||||| ||||||||||| || |||||| || Sbjct: 1090 caaagaaatcaggctgtactagcaatagagtacaaaagaaaaccagaggatgaagaatca 1149 Query: 1263 tcaa 1266 |||| Sbjct: 1150 tcaa 1153 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1564 tggacctgctcacactcgacagcctctacgacgacgcgcaccagcacgcgcagcagaacg 1623 ||||| ||||||| || |||||||| ||| |||| ||||||| || ||||| ||||||| Sbjct: 1463 tggacttgctcacccttgacagcctatacaacgaggcgcaccgacaagcgcaacagaacg 1522 Query: 1624 caagctacaacccctgggag 1643 |||||||||||||||||||| Sbjct: 1523 caagctacaacccctgggag 1542 Score = 44.1 bits (22), Expect = 2.2 Identities = 70/86 (81%) Strand = Plus / Plus Query: 1359 gatttgctggggatggatgaaccgatccctgacatgacagcgcttgatcaaaagaatgct 1418 ||||||||||| ||| ||||||||| ||||||| || || | || ||||||||| || Sbjct: 1255 gatttgctgggaatgaatgaaccgacccctgacgtgtcaaaaatcgaccaaaagaattct 1314 Query: 1419 ttggcgctggcaattgttgaaccaga 1444 ||||| | ||||||||| ||||||| Sbjct: 1315 ttggctttagcaattgttcaaccaga 1340
>dbj|AK101538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048F22, full insert sequence Length = 2176 Score = 412 bits (208), Expect = e-111 Identities = 774/964 (80%), Gaps = 9/964 (0%) Strand = Plus / Plus Query: 312 agcatcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtg 371 ||||||||||||||||| || ||||| |||||| | || ||||| ||||| || |||||| Sbjct: 191 agcatcaggaagtatgttggagccctaaaggacacaacaaccgtaagcatagcaaaagtg 250 Query: 372 aacagcgactacaagcaactggacatcgccatcgtcaaggccaccaaccatgtggagcgg 431 |||||||| || ||| | |||| || || || || |||||||| |||||||| ||| Sbjct: 251 aacagcgattataaggatttggatattgctattgtgaaggccacaaaccatgtcgagaat 310 Query: 432 cctgcaaaggagaagtacatcagagatatcttcatgcatctcaattccgggagggctcgc 491 | |||||||||||||||| ||||||||||| |||||| | | || |||||||| Sbjct: 311 ctaccaaaggagaagtacataagagatatcttttatcatctctctgctggaagggctcga 370 Query: 492 gcggacgtggcctactgcatccgcgccctcgccagacgcctctccaagacgcgcaactgg 551 || || || || ||||||||||| || || | || || || || ||||| ||||||||| Sbjct: 371 gcagatgtagcatactgcatccgtgctcttggtaggcgtctttcaaagacacgcaactgg 430 Query: 552 gcggttgcactcaagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttct 611 ||||||||||| ||||| |||| || |||||||||||||| || || || || || || Sbjct: 431 gcggttgcacttaagaccttaatcgtcatacaccgtgccctacgggaagttgatcccact 490 Query: 612 ttccgtgatgagctcatcagttacggaagatctagcggccaaatgctacacatgtcctat 671 ||||||||||||||||| || || |||||||| || || ||||| || ||||||| Sbjct: 491 ttccgtgatgagctcattagctatggaagatccagtacacatatgcttcatttgtcctac 550 Query: 672 ttcaaagatgactccagccctgatgcttgggatcactccgcgtgggtgcgcaattacgct 731 || || ||||| || || | || ||||||||| | || || ||||| |||||||| || Sbjct: 551 tttaaggatgattcaagtgcagaagcttgggattattctgcatgggttcgcaattatgca 610 Query: 732 ttgtttttggaagagaggctcgaatctttccgtgtgctgaattatgacgtcgaactggat 791 |||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||| Sbjct: 611 ttgtacttagaagagagactagaatctttccgtgtactgaaatatgacgttgaaaaagat 670 Query: 792 ccattgggaacacgagatgttgatacaactggtttgcttgcacaactgccggcattgtcg 851 ||| | |||| ||||| | || || ||||||||||| ||||||||| ||| | | Sbjct: 671 ccaccgagaactcgagacctcgacacggttggtttgcttgaacaactgccagcactacag 730 Query: 852 cagcttctttttcggctaatcagttgtcagccgcatgggtcgtcatcttataacaccata 911 |||||||||||||||||| || |||| ||||| || ||||| ||||||||||||| |||| Sbjct: 731 cagcttctttttcggctactcggttgccagccacaagggtcatcatcttataacaacata 790 Query: 912 atccagcatgcccttgcaatggttgctacggagagtattaggatccagacagccatcaat 971 ||||||||||| ||| ||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 791 atccagcatgcactttcaatggttgctctagagagtgttaggatccatacagctatcaac 850 Query: 972 gatggcatactcaatctagttgacaagttcttcgatatgcaaagggacgacgctattagg 1031 ||||| ||||| ||||| |||||||||||||| || ||||||||||| || ||| |||| Sbjct: 851 gatgggatactgaatctggttgacaagttctttgagatgcaaagggatgatgctcttaga 910 Query: 1032 gcccttgatatatacaaaaaagcacttaagcaggcagggcaactttctggattttacgag 1091 |||||||| ||| ||||| |||| |||| ||||| || |||||||||| |||||| || Sbjct: 911 gcccttgacttattcaaaagagcaattaaccaggcgggacaactttctgaattttatgaa 970 Query: 1092 acgtgtagaaccatacatattgggcggggtgagaagctgttaacaatcgaacagcctcct 1151 | ||||| |||||||||||||||||| || |||| | | |||| ||| |||| |||||| Sbjct: 971 atgtgtaaaaccatacatattgggcgtggcgagaggttcttaaaaattgaactgcctccg 1030 Query: 1152 gcgtcattcttgcaagccatggaagattatgtgagagatgctcctcttgcttcaaaa--- 1208 | |||||| ||||||| ||||| || |||||||||||||| || |||||||||| | Sbjct: 1031 acctcattcctgcaagctatggaggagtatgtgagagatgcaccccttgcttcaataaac 1090 Query: 1209 ------aatcaggctgtactggcaatagagtacaacagaaaaccagaagaggaagaagca 1262 |||||||||||||| |||||||||||||| ||||||||||| || |||||| || Sbjct: 1091 caaagaaatcaggctgtactagcaatagagtacaaaagaaaaccagaggatgaagaatca 1150 Query: 1263 tcaa 1266 |||| Sbjct: 1151 tcaa 1154 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1564 tggacctgctcacactcgacagcctctacgacgacgcgcaccagcacgcgcagcagaacg 1623 ||||| ||||||| || |||||||| ||| |||| ||||||| || ||||| ||||||| Sbjct: 1464 tggacttgctcacccttgacagcctatacaacgaggcgcaccgacaagcgcaacagaacg 1523 Query: 1624 caagctacaacccctgggag 1643 |||||||||||||||||||| Sbjct: 1524 caagctacaacccctgggag 1543 Score = 44.1 bits (22), Expect = 2.2 Identities = 70/86 (81%) Strand = Plus / Plus Query: 1359 gatttgctggggatggatgaaccgatccctgacatgacagcgcttgatcaaaagaatgct 1418 ||||||||||| ||| ||||||||| ||||||| || || | || ||||||||| || Sbjct: 1256 gatttgctgggaatgaatgaaccgacccctgacgtgtcaaaaatcgaccaaaagaattct 1315 Query: 1419 ttggcgctggcaattgttgaaccaga 1444 ||||| | ||||||||| ||||||| Sbjct: 1316 ttggctttagcaattgttcaaccaga 1341
>ref|NM_001063485.1| Oryza sativa (japonica cultivar-group) Os06g0175500 (Os06g0175500) mRNA, complete cds Length = 2155 Score = 85.7 bits (43), Expect = 7e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 504 tactgcatccgcgccctcgccagacgcctctccaagacgcgcaactgggcggttgcactc 563 |||||||||| ||||| || ||||| || |||||||| ||||| |||||||||||| | Sbjct: 348 tactgcatccatgcccttgcaagacgtctttccaagacacgcaattgggcggttgcattg 407 Query: 564 aagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttctttccgtgatgag 623 ||||| ||||||| ||||| || |||||||| |||||||| || |||| ||||| ||| Sbjct: 408 aagacattaattgtcatacatcgcgcccttcgagaggtcgatcccacttttcgtgaagag 467 Query: 624 ctcatcagttacggaagatctag 646 || |||| ||| || |||||||| Sbjct: 468 cttatcaattatggcagatctag 490 Score = 67.9 bits (34), Expect = 2e-07 Identities = 115/142 (80%) Strand = Plus / Plus Query: 316 tcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaaca 375 ||||||||||| | || |||||||||||| |||| || || ||| | || |||||||||| Sbjct: 160 tcaggaagtatcttggagccctcaaggacaccacaactgtgagcttggcaaaagtgaaca 219 Query: 376 gcgactacaagcaactggacatcgccatcgtcaaggccaccaaccatgtggagcggcctg 435 | || || ||| || |||| || || || || ||||| || |||||||| ||||| || Sbjct: 220 gtgattataaggaattggatattgcaattgtgaaggctacaaaccatgttgagcgtccat 279 Query: 436 caaaggagaagtacatcagaga 457 |||||||||||||||| ||||| Sbjct: 280 caaaggagaagtacataagaga 301 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 1094 gtgtagaaccatacatattgggcggggtgagaagctgttaacaatcgaacagcctcctgc 1153 ||||| ||| ||||| |||||||| ||||||||| | |||| ||||||||||||||| || Sbjct: 938 gtgtaaaacgatacacattgggcgtggtgagaagttcttaaaaatcgaacagcctccagc 997 Query: 1154 gtcattcttgcaagccatggaagattatgtgagagatgctcc 1195 |||||||| | ||||||| || ||||||| ||| ||||| Sbjct: 998 ttcattcttagtaaccatggaggaatatgtgacagaagctcc 1039 Score = 63.9 bits (32), Expect = 2e-06 Identities = 119/148 (80%) Strand = Plus / Plus Query: 908 cataatccagcatgcccttgcaatggttgctacggagagtattaggatccagacagccat 967 |||||||||||| || ||| ||||||||||| ||| ||| ||| |||| | || || || Sbjct: 752 cataatccagcacgcactttcaatggttgctctggaaagtgttaagatctacactgctat 811 Query: 968 caatgatggcatactcaatctagttgacaagttcttcgatatgcaaagggacgacgctat 1027 | |||||| | | | ||||| |||||||||||||| || |||||||| || ||| | Sbjct: 812 tagtgatggtacaattaatctggttgacaagttctttgagatgcaaagaagtgatgctgt 871 Query: 1028 tagggcccttgatatatacaaaaaagca 1055 |||||| |||||||||||||||| |||| Sbjct: 872 tagggcacttgatatatacaaaagagca 899 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1552 tggccggtggaatggacctgctcacactcgacagcctctacgacgacgcg 1601 |||| |||||| ||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1399 tggctggtggactggacttgctcacgctcgacagcctgtacgacgacgcg 1448
>dbj|AK100481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096B16, full insert sequence Length = 2156 Score = 85.7 bits (43), Expect = 7e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 504 tactgcatccgcgccctcgccagacgcctctccaagacgcgcaactgggcggttgcactc 563 |||||||||| ||||| || ||||| || |||||||| ||||| |||||||||||| | Sbjct: 349 tactgcatccatgcccttgcaagacgtctttccaagacacgcaattgggcggttgcattg 408 Query: 564 aagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttctttccgtgatgag 623 ||||| ||||||| ||||| || |||||||| |||||||| || |||| ||||| ||| Sbjct: 409 aagacattaattgtcatacatcgcgcccttcgagaggtcgatcccacttttcgtgaagag 468 Query: 624 ctcatcagttacggaagatctag 646 || |||| ||| || |||||||| Sbjct: 469 cttatcaattatggcagatctag 491 Score = 67.9 bits (34), Expect = 2e-07 Identities = 115/142 (80%) Strand = Plus / Plus Query: 316 tcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaaca 375 ||||||||||| | || |||||||||||| |||| || || ||| | || |||||||||| Sbjct: 161 tcaggaagtatcttggagccctcaaggacaccacaactgtgagcttggcaaaagtgaaca 220 Query: 376 gcgactacaagcaactggacatcgccatcgtcaaggccaccaaccatgtggagcggcctg 435 | || || ||| || |||| || || || || ||||| || |||||||| ||||| || Sbjct: 221 gtgattataaggaattggatattgcaattgtgaaggctacaaaccatgttgagcgtccat 280 Query: 436 caaaggagaagtacatcagaga 457 |||||||||||||||| ||||| Sbjct: 281 caaaggagaagtacataagaga 302 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 1094 gtgtagaaccatacatattgggcggggtgagaagctgttaacaatcgaacagcctcctgc 1153 ||||| ||| ||||| |||||||| ||||||||| | |||| ||||||||||||||| || Sbjct: 939 gtgtaaaacgatacacattgggcgtggtgagaagttcttaaaaatcgaacagcctccagc 998 Query: 1154 gtcattcttgcaagccatggaagattatgtgagagatgctcc 1195 |||||||| | ||||||| || ||||||| ||| ||||| Sbjct: 999 ttcattcttagtaaccatggaggaatatgtgacagaagctcc 1040 Score = 63.9 bits (32), Expect = 2e-06 Identities = 119/148 (80%) Strand = Plus / Plus Query: 908 cataatccagcatgcccttgcaatggttgctacggagagtattaggatccagacagccat 967 |||||||||||| || ||| ||||||||||| ||| ||| ||| |||| | || || || Sbjct: 753 cataatccagcacgcactttcaatggttgctctggaaagtgttaagatctacactgctat 812 Query: 968 caatgatggcatactcaatctagttgacaagttcttcgatatgcaaagggacgacgctat 1027 | |||||| | | | ||||| |||||||||||||| || |||||||| || ||| | Sbjct: 813 tagtgatggtacaattaatctggttgacaagttctttgagatgcaaagaagtgatgctgt 872 Query: 1028 tagggcccttgatatatacaaaaaagca 1055 |||||| |||||||||||||||| |||| Sbjct: 873 tagggcacttgatatatacaaaagagca 900 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1552 tggccggtggaatggacctgctcacactcgacagcctctacgacgacgcg 1601 |||| |||||| ||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1400 tggctggtggactggacttgctcacgctcgacagcctgtacgacgacgcg 1449
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1564 tggacctgctcacactcgacagcctctacgacgacgcgcaccagcacgcgcagcagaacg 1623 ||||| ||||||| || |||||||| ||| |||| ||||||| || ||||| ||||||| Sbjct: 34278333 tggacttgctcacccttgacagcctatacaacgaggcgcaccgacaagcgcaacagaacg 34278392 Query: 1624 caagctacaacccctgggag 1643 |||||||||||||||||||| Sbjct: 34278393 caagctacaacccctgggag 34278412 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1213 aggctgtactggcaatagagtacaacagaaaaccagaagaggaagaagcatcaa 1266 |||||||||| |||||||||||||| ||||||||||| || |||||| |||||| Sbjct: 34277685 aggctgtactagcaatagagtacaaaagaaaaccagaggatgaagaatcatcaa 34277738 Score = 65.9 bits (33), Expect = 6e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 878 tcagccgcatgggtcgtcatcttataacaccataatccagcatgcccttgcaatggt 934 |||||| || ||||| ||||||||||||| ||||||||||||||| ||| ||||||| Sbjct: 34276810 tcagccacaagggtcatcatcttataacaacataatccagcatgcactttcaatggt 34276866 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 312 agcatcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtg 371 ||||||||||||||||| || ||||| |||||| | || ||||| ||||| || |||||| Sbjct: 34275290 agcatcaggaagtatgttggagccctaaaggacacaacaaccgtaagcatagcaaaagtg 34275349 Query: 372 aacagcga 379 |||||||| Sbjct: 34275350 aacagcga 34275357 Score = 60.0 bits (30), Expect = 4e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 554 ggttgcactcaagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttcttt 613 ||||||||| ||||| |||| || |||||||||||||| || || || || || |||| Sbjct: 34276011 ggttgcacttaagaccttaatcgtcatacaccgtgccctacgggaagttgatcccacttt 34276070 Query: 614 ccgtgatgagctcatcagttacggaagatc 643 ||||||||||||||| || || |||||||| Sbjct: 34276071 ccgtgatgagctcattagctatggaagatc 34276100 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 696 gcttgggatcactccgcgtgggtgcgcaattacgctttgtttttggaagagaggctcgaa 755 ||||||||| | || || ||||| |||||||| || |||| || |||||||| || ||| Sbjct: 34276260 gcttgggattattctgcatgggttcgcaattatgcattgtacttagaagagagactagaa 34276319 Query: 756 tctttccgtgtgctgaattatgacgt 781 ||||||||||| ||||| |||||||| Sbjct: 34276320 tctttccgtgtactgaaatatgacgt 34276345 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaag 386 |||||||||||||||||||||| ||| || ||||||| || |||||||||| |||| Sbjct: 4140250 ggcgccctcaaggactccaccaaggtcggcctcgccaaggtcaacagcgacttcaag 4140194 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1142 acagcctcctgcgtcattcttgcaagccatggaagattatgtgagagatgctcctcttgc 1201 ||||||||| | |||||| ||||||| ||||| || |||||||||||||| || ||||| Sbjct: 34277485 acagcctccgacctcattcctgcaagctatggaggagtatgtgagagatgcaccccttgc 34277544 Query: 1202 ttcaa 1206 ||||| Sbjct: 34277545 ttcaa 34277549 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1062 caggcagggcaactttctggattttacgagacgtgtagaaccatacatattgggcg 1117 ||||| || |||||||||| |||||| || | ||||| |||||||||||||||||| Sbjct: 34277321 caggcgggacaactttctgaattttatgaaatgtgtaaaaccatacatattgggcg 34277376 Score = 50.1 bits (25), Expect = 0.036 Identities = 43/49 (87%) Strand = Plus / Plus Query: 821 tggtttgcttgcacaactgccggcattgtcgcagcttctttttcggcta 869 ||||||||||| ||||||||| ||| | ||||||||||||||||||| Sbjct: 34276656 tggtttgcttgaacaactgccagcactacagcagcttctttttcggcta 34276704 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 35223706 actccaccacctcctcctcctc 35223727 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgctgctactgctactgctac 27 ||||||||||||||||||||| Sbjct: 1192246 tgctgctactgctactgctac 1192226 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 30218277 ctccaccacctcctcctcctc 30218257 Score = 42.1 bits (21), Expect = 8.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 997 agttcttcgatatgcaaagggacgacgctattagggcccttgatatatacaaaaaagcac 1056 ||||||| || ||||||||||| || ||| |||| |||||||| ||| ||||| |||| Sbjct: 34277100 agttctttgagatgcaaagggatgatgctcttagagcccttgacttattcaaaagagcaa 34277159 Query: 1057 ttaagcagg 1065 |||| |||| Sbjct: 34277160 ttaaccagg 34277168
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 79.8 bits (40), Expect = 4e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 1564 tggacctgctcacactcgacagcctctacgacgacgcgcaccagcacgcgcagcagaacg 1623 ||||| ||||||| || |||||||| ||| |||| ||||||| || ||||| ||||||| Sbjct: 113606 tggacttgctcacccttgacagcctatacaacgaggcgcaccgacaagcgcaacagaacg 113665 Query: 1624 caagctacaacccctgggag 1643 |||||||||||||||||||| Sbjct: 113666 caagctacaacccctgggag 113685 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1213 aggctgtactggcaatagagtacaacagaaaaccagaagaggaagaagcatcaa 1266 |||||||||| |||||||||||||| ||||||||||| || |||||| |||||| Sbjct: 112958 aggctgtactagcaatagagtacaaaagaaaaccagaggatgaagaatcatcaa 113011 Score = 65.9 bits (33), Expect = 6e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 878 tcagccgcatgggtcgtcatcttataacaccataatccagcatgcccttgcaatggt 934 |||||| || ||||| ||||||||||||| ||||||||||||||| ||| ||||||| Sbjct: 112083 tcagccacaagggtcatcatcttataacaacataatccagcatgcactttcaatggt 112139 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 312 agcatcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtg 371 ||||||||||||||||| || ||||| |||||| | || ||||| ||||| || |||||| Sbjct: 110563 agcatcaggaagtatgttggagccctaaaggacacaacaaccgtaagcatagcaaaagtg 110622 Query: 372 aacagcga 379 |||||||| Sbjct: 110623 aacagcga 110630 Score = 60.0 bits (30), Expect = 4e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 554 ggttgcactcaagacgctaattgtgatacaccgtgcccttcgcgaggtcgacccttcttt 613 ||||||||| ||||| |||| || |||||||||||||| || || || || || |||| Sbjct: 111284 ggttgcacttaagaccttaatcgtcatacaccgtgccctacgggaagttgatcccacttt 111343 Query: 614 ccgtgatgagctcatcagttacggaagatc 643 ||||||||||||||| || || |||||||| Sbjct: 111344 ccgtgatgagctcattagctatggaagatc 111373 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 696 gcttgggatcactccgcgtgggtgcgcaattacgctttgtttttggaagagaggctcgaa 755 ||||||||| | || || ||||| |||||||| || |||| || |||||||| || ||| Sbjct: 111533 gcttgggattattctgcatgggttcgcaattatgcattgtacttagaagagagactagaa 111592 Query: 756 tctttccgtgtgctgaattatgacgt 781 ||||||||||| ||||| |||||||| Sbjct: 111593 tctttccgtgtactgaaatatgacgt 111618 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1142 acagcctcctgcgtcattcttgcaagccatggaagattatgtgagagatgctcctcttgc 1201 ||||||||| | |||||| ||||||| ||||| || |||||||||||||| || ||||| Sbjct: 112758 acagcctccgacctcattcctgcaagctatggaggagtatgtgagagatgcaccccttgc 112817 Query: 1202 ttcaa 1206 ||||| Sbjct: 112818 ttcaa 112822 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1062 caggcagggcaactttctggattttacgagacgtgtagaaccatacatattgggcg 1117 ||||| || |||||||||| |||||| || | ||||| |||||||||||||||||| Sbjct: 112594 caggcgggacaactttctgaattttatgaaatgtgtaaaaccatacatattgggcg 112649 Score = 50.1 bits (25), Expect = 0.036 Identities = 43/49 (87%) Strand = Plus / Plus Query: 821 tggtttgcttgcacaactgccggcattgtcgcagcttctttttcggcta 869 ||||||||||| ||||||||| ||| | ||||||||||||||||||| Sbjct: 111929 tggtttgcttgaacaactgccagcactacagcagcttctttttcggcta 111977 Score = 42.1 bits (21), Expect = 8.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 997 agttcttcgatatgcaaagggacgacgctattagggcccttgatatatacaaaaaagcac 1056 ||||||| || ||||||||||| || ||| |||| |||||||| ||| ||||| |||| Sbjct: 112373 agttctttgagatgcaaagggatgatgctcttagagcccttgacttattcaaaagagcaa 112432 Query: 1057 ttaagcagg 1065 |||| |||| Sbjct: 112433 ttaaccagg 112441
>ref|NM_001052592.1| Oryza sativa (japonica cultivar-group) Os02g0175700 (Os02g0175700) mRNA, complete cds Length = 2074 Score = 69.9 bits (35), Expect = 4e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaagcaa 389 |||||||||||||||||||||| ||| || ||||||| || |||||||||| |||| | Sbjct: 130 ggcgccctcaaggactccaccaaggtcggcctcgccaaggtcaacagcgacttcaaggag 189 Query: 390 ctggacatcgccatcgtcaaggccaccaaccatgt 424 |||| || || || || ||||||||||||||||| Sbjct: 190 ttggatattgcaattgtgaaggccaccaaccatgt 224
>dbj|AK069542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023L17, full insert sequence Length = 2075 Score = 69.9 bits (35), Expect = 4e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaagcaa 389 |||||||||||||||||||||| ||| || ||||||| || |||||||||| |||| | Sbjct: 131 ggcgccctcaaggactccaccaaggtcggcctcgccaaggtcaacagcgacttcaaggag 190 Query: 390 ctggacatcgccatcgtcaaggccaccaaccatgt 424 |||| || || || || ||||||||||||||||| Sbjct: 191 ttggatattgcaattgtgaaggccaccaaccatgt 225
>dbj|AK058599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H06, full insert sequence Length = 1372 Score = 67.9 bits (34), Expect = 2e-07 Identities = 85/102 (83%) Strand = Plus / Plus Query: 1094 gtgtagaaccatacatattgggcggggtgagaagctgttaacaatcgaacagcctcctgc 1153 ||||| ||| ||||| |||||||| ||||||||| | |||| ||||||||||||||| || Sbjct: 123 gtgtaaaacgatacacattgggcgtggtgagaagttcttaaaaatcgaacagcctccagc 182 Query: 1154 gtcattcttgcaagccatggaagattatgtgagagatgctcc 1195 |||||||| | ||||||| || ||||||| ||| ||||| Sbjct: 183 ttcattcttagtaaccatggaggaatatgtgacagaagctcc 224 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1552 tggccggtggaatggacctgctcacactcgacagcctctacgacgacgcg 1601 |||| |||||| ||||| ||||||| ||||||||||| |||||||||||| Sbjct: 584 tggctggtggactggacttgctcacgctcgacagcctgtacgacgacgcg 633 Score = 56.0 bits (28), Expect = 6e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 984 aatctagttgacaagttcttcgatatgcaaagggacgacgctattagggcccttgatata 1043 ||||| |||||||||||||| || |||||||| || ||| ||||||| ||||||||| Sbjct: 13 aatctggttgacaagttctttgagatgcaaagaagtgatgctgttagggcacttgatata 72 Query: 1044 tacaaaaaagca 1055 ||||||| |||| Sbjct: 73 tacaaaagagca 84
>ref|NM_001062767.1| Oryza sativa (japonica cultivar-group) Os05g0549000 (Os05g0549000) mRNA, complete cds Length = 2163 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 140 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 177
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 28203 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 28166
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 54044 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 54007
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 495 gacgtggcctactgcatccgcgccctcgccagacgcctctccaagacgcgcaactggg 552 |||||| |||||||| ||| |||||||||| | || ||||||||||||| |||||||| Sbjct: 28904263 gacgtgtcctactgcgtccacgccctcgcccgccgtctctccaagacgcacaactggg 28904320 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 1557 ggtggaatggacctgctcacactcgacagcctctacgacgacgcg 1601 |||||| ||||| ||||||| ||||||||||| |||||||||||| Sbjct: 3801015 ggtggactggacttgctcacgctcgacagcctgtacgacgacgcg 3800971 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 397 tcgccatcgtcaaggccaccaaccatgtggagcg 430 ||||| ||||||||||||||||||| || ||||| Sbjct: 28904064 tcgccgtcgtcaaggccaccaaccacgtcgagcg 28904097 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1027 ttagggcccttgatatatacaaaaaagca 1055 ||||||| |||||||||||||||| |||| Sbjct: 3802973 ttagggcacttgatatatacaaaagagca 3802945 Score = 42.1 bits (21), Expect = 8.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 408 aaggccaccaaccatgtggagcggcctgcaaaggagaagtacatcagag 456 ||||| || |||||||| ||||| || |||||||||||||||| |||| Sbjct: 3805242 aaggctacaaaccatgttgagcgtccatcaaaggagaagtacataagag 3805194 Score = 42.1 bits (21), Expect = 8.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 316 tcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaaca 375 ||||||||||| | || |||||||||||| |||| || || ||| | || |||||||||| Sbjct: 3805446 tcaggaagtatcttggagccctcaaggacaccacaactgtgagcttggcaaaagtgaaca 3805387 Query: 376 g 376 | Sbjct: 3805386 g 3805386 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 12168523 ctccaccacctcctcctcctc 12168543 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 23618905 ctccaccacctcctcctcctc 23618925 Score = 42.1 bits (21), Expect = 8.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaag 386 ||||| |||||||||||||||| ||| || ||||||| | |||||||| |||||| Sbjct: 26873835 ggcgcgctcaaggactccaccaaggtcggcctcgccaacttcaacagcgagtacaag 26873891
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 27021621 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 27021584 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1264 caactccaccacctcctcctc 1284 ||||||||||||||||||||| Sbjct: 10654186 caactccaccacctcctcctc 10654206 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 27619697 ctccaccacctcctcctcctc 27619717
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 60.0 bits (30), Expect = 4e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 495 gacgtggcctactgcatccgcgccctcgccagacgcctctccaagacgcgcaactggg 552 |||||| |||||||| ||| |||||||||| | || ||||||||||||| |||||||| Sbjct: 54307 gacgtgtcctactgcgtccacgccctcgcccgccgtctctccaagacgcacaactggg 54364 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 397 tcgccatcgtcaaggccaccaaccatgtggagcg 430 ||||| ||||||||||||||||||| || ||||| Sbjct: 54108 tcgccgtcgtcaaggccaccaaccacgtcgagcg 54141
>dbj|AK103211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M01, full insert sequence Length = 2166 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 143 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 180
>dbj|AK072302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023B03, full insert sequence Length = 1993 Score = 60.0 bits (30), Expect = 4e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| |||||||||||||||||||||||| ||||||| Sbjct: 108 ggcgcgctcaaggactccaccaccgtcagcctcgccaa 145
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 1557 ggtggaatggacctgctcacactcgacagcctctacgacgacgcg 1601 |||||| ||||| ||||||| ||||||||||| |||||||||||| Sbjct: 58969 ggtggactggacttgctcacgctcgacagcctgtacgacgacgcg 58925 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1027 ttagggcccttgatatatacaaaaaagca 1055 ||||||| |||||||||||||||| |||| Sbjct: 60927 ttagggcacttgatatatacaaaagagca 60899 Score = 42.1 bits (21), Expect = 8.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 408 aaggccaccaaccatgtggagcggcctgcaaaggagaagtacatcagag 456 ||||| || |||||||| ||||| || |||||||||||||||| |||| Sbjct: 63196 aaggctacaaaccatgttgagcgtccatcaaaggagaagtacataagag 63148 Score = 42.1 bits (21), Expect = 8.8 Identities = 51/61 (83%) Strand = Plus / Minus Query: 316 tcaggaagtatgtgggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaaca 375 ||||||||||| | || |||||||||||| |||| || || ||| | || |||||||||| Sbjct: 63400 tcaggaagtatcttggagccctcaaggacaccacaactgtgagcttggcaaaagtgaaca 63341 Query: 376 g 376 | Sbjct: 63340 g 63340
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Minus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaag 386 |||||||||||||||||||||| ||| || ||||||| || |||||||||| |||| Sbjct: 50264 ggcgccctcaaggactccaccaaggtcggcctcgccaaggtcaacagcgacttcaag 50208
>emb|CT831516.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202K17, full insert sequence Length = 2517 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaagcaa 389 ||||| |||||||||||||||| ||| || ||||||| | |||||||| |||||| | Sbjct: 435 ggcgcgctcaaggactccaccaaggtcggcctcgccaacttcaacagcgagtacaaggat 494 Query: 390 ctggacatcgccatcgtcaaggccaccaacca 421 |||| |||||||| || ||||| |||||||| Sbjct: 495 ttggatatcgccattgtgaaggcaaccaacca 526 Score = 42.1 bits (21), Expect = 8.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 966 atcaatgatggcatactcaatctagttgacaagttcttcgatatgcaaa 1014 |||||||||||||| ||||||| ||||| | || ||||||||||||| Sbjct: 1296 atcaatgatggcatcatcaatcttgttgatatgtatttcgatatgcaaa 1344
>ref|NM_001064809.1| Oryza sativa (japonica cultivar-group) Os06g0661400 (Os06g0661400) mRNA, complete cds Length = 1939 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaagcaa 389 ||||| |||||||||||||||| ||| || ||||||| | |||||||| |||||| | Sbjct: 72 ggcgcgctcaaggactccaccaaggtcggcctcgccaacttcaacagcgagtacaaggat 131 Query: 390 ctggacatcgccatcgtcaaggccaccaacca 421 |||| |||||||| || ||||| |||||||| Sbjct: 132 ttggatatcgccattgtgaaggcaaccaacca 163
>dbj|AK106992.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-B03, full insert sequence Length = 2019 Score = 56.0 bits (28), Expect = 6e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaaagtgaacagcgactacaagcaa 389 ||||| |||||||||||||||| ||| || ||||||| | |||||||| |||||| | Sbjct: 152 ggcgcgctcaaggactccaccaaggtcggcctcgccaacttcaacagcgagtacaaggat 211 Query: 390 ctggacatcgccatcgtcaaggccaccaacca 421 |||| |||||||| || ||||| |||||||| Sbjct: 212 ttggatatcgccattgtgaaggcaaccaacca 243
>ref|NM_001050491.1| Oryza sativa (japonica cultivar-group) Os01g0694900 (Os01g0694900) mRNA, complete cds Length = 2221 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| ||||||||| |||||||||||||| ||||||| Sbjct: 180 ggcgcgctcaaggacaccaccaccgtcagcctcgccaa 217
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| ||||||||| |||||||||||||| ||||||| Sbjct: 28722557 ggcgcgctcaaggacaccaccaccgtcagcctcgccaa 28722594 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ccgctgctgctactgctactgctac 27 ||||| ||||||||||||||||||| Sbjct: 18182899 ccgctactgctactgctactgctac 18182923
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| ||||||||| |||||||||||||| ||||||| Sbjct: 105631 ggcgcgctcaaggacaccaccaccgtcagcctcgccaa 105668
>dbj|AK063321.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H02, full insert sequence Length = 2221 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 330 ggcgccctcaaggactccaccaccgtcagcatcgccaa 367 ||||| ||||||||| |||||||||||||| ||||||| Sbjct: 180 ggcgcgctcaaggacaccaccaccgtcagcctcgccaa 217
>gb|DQ978343.1| Laminaria japonica clone H49 microsatellite sequence Length = 498 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 ccgctgctgctactgctactgctac 27 ||||||||||||||||||||||||| Sbjct: 53 ccgctgctgctactgctactgctac 77
>gb|AY312168.1| Zea mays homeobox transcription factor GNARLY1 (gn1) gene, complete cds Length = 17631 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctacg 28 |||||||||||||||||||||||| Sbjct: 448 gctgctgctactgctactgctacg 471
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1687 tgcagcagcagtatcagcagcagc 1710 |||||||||||||||||||||||| Sbjct: 3905708 tgcagcagcagtatcagcagcagc 3905685 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1689 cagcagcagtatcagcagcagc 1710 |||||||||||||||||||||| Sbjct: 3905754 cagcagcagtatcagcagcagc 3905733 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1688 gcagcagcagtatcagcagca 1708 ||||||||||||||||||||| Sbjct: 3905800 gcagcagcagtatcagcagca 3905780 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 14680297 ctccaccacctcctcctcctc 14680277 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ccagcgagcgagcgagcgaga 101 ||||||||||||||||||||| Sbjct: 29823853 ccagcgagcgagcgagcgaga 29823833 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 30003218 ctccaccacctcctcctcctc 30003198
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1687 tgcagcagcagtatcagcagcagc 1710 |||||||||||||||||||||||| Sbjct: 112070 tgcagcagcagtatcagcagcagc 112047 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1689 cagcagcagtatcagcagcagc 1710 |||||||||||||||||||||| Sbjct: 112116 cagcagcagtatcagcagcagc 112095 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1688 gcagcagcagtatcagcagca 1708 ||||||||||||||||||||| Sbjct: 112162 gcagcagcagtatcagcagca 112142
>dbj|AP004468.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09A24, TM0003, complete sequence Length = 88828 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1162 tgcaagccatggaagattatgtgagagatgctcctc 1197 |||||||||||||||| ||||| | ||||||||||| Sbjct: 23124 tgcaagccatggaagagtatgtcaaagatgctcctc 23159
>dbj|AB047401.1| Periplaneta americana Vg-2 mRNA for vitellogenin-2, complete cds Length = 5826 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 4 cgctgctgctactgctactgctac 27 |||||||||||||||||||||||| Sbjct: 1276 cgctgctgctactgctactgctac 1253
>gb|EF063097.1| Haliotis midae clone HmNR20M microsatellite sequence Length = 384 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 274 gctgctgctactgctactgctac 296 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 236 ctgctgctactgctactgctac 257
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 3800418 gcagcagcagtatcagcagcagc 3800396 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 7519067 ctccaccacctcctcctcctc 7519047 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 10515337 gctgctgctactgctactgct 10515317 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1269 ccaccacctcctcctcctcaa 1289 ||||||||||||||||||||| Sbjct: 10986903 ccaccacctcctcctcctcaa 10986883 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1682 gatgatgcagcagcagtatcagcagcagc 1710 |||||||||||||||| | |||||||||| Sbjct: 22268219 gatgatgcagcagcagcagcagcagcagc 22268247
>tpe|BN000002.1|HSA000002 TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10 Length = 495475 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 103744 gctgctgctactgctactgctac 103722
>ref|XM_001080407.1| PREDICTED: Rattus norvegicus hypothetical protein LOC687865 (LOC687865), mRNA Length = 1272 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 276 gctgctgctactgctactgctac 254
>ref|XM_001077613.1| PREDICTED: Rattus norvegicus hypothetical protein LOC691301 (LOC691301), mRNA Length = 1272 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 276 gctgctgctactgctactgctac 254
>ref|XM_001073912.1| PREDICTED: Rattus norvegicus hypothetical protein LOC686389 (LOC686389), mRNA Length = 1581 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 1113 gctgctgctactgctactgctac 1091
>ref|XM_001072007.1| PREDICTED: Rattus norvegicus hypothetical protein LOC689787 (LOC689787), mRNA Length = 1581 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 1113 gctgctgctactgctactgctac 1091
>gb|AC186776.1| Trichinella spiralis chromosome UNK clone TS195-38H12, complete sequence Length = 99194 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 89021 gctgctgctactgctactgctac 88999
>ref|XM_992177.1| PREDICTED: Mus musculus hypothetical protein LOC672260 (LOC672260), mRNA Length = 1299 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 858 gctgctgctactgctactgctac 880
>gb|AC158792.2| Mus musculus chromosome 3, clone RP23-300L15, complete sequence Length = 205546 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 4746 gctgctgctactgctactgctac 4768
>gb|AC167421.2| Mus musculus BAC clone RP23-143K19 from chromosome 3, complete sequence Length = 194311 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49259 gctgctgctactgctactgctac 49237 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49352 gctgctgctactgctactgctac 49330 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49385 gctgctgctactgctactgctac 49363 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49412 gctgctgctactgctactgctac 49390 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49460 gctgctgctactgctactgctac 49438 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49520 gctgctgctactgctactgctac 49498 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49547 gctgctgctactgctactgctac 49525 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49607 gctgctgctactgctactgctac 49585 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49646 gctgctgctactgctactgctac 49624 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49694 gctgctgctactgctactgctac 49672 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49754 gctgctgctactgctactgctac 49732 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49832 gctgctgctactgctactgctac 49810 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49970 gctgctgctactgctactgctac 49948 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 49672 ctgctgctactgctactgctac 49651 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 49433 gctgctgctactgctactgct 49413 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 49568 gctgctgctactgctactgct 49548 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 49715 gctgctgctactgctactgct 49695 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 49775 gctgctgctactgctactgct 49755 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 49889 gctgctgctactgctactgct 49869
>gb|AC101716.6| Mus musculus chromosome 7, clone RP23-287I20, complete sequence Length = 182151 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 82092 gctgctgctactgctactgctac 82114
>gb|AY423444.1| Anguilla japonica vitellogenin 2 (VTG2) mRNA, partial cds Length = 5423 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 3525 gctgctgctactgctactgctac 3503
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15073 gctgctgctactgctactgctac 15095 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15211 gctgctgctactgctactgctac 15233 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15289 gctgctgctactgctactgctac 15311 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15349 gctgctgctactgctactgctac 15371 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15397 gctgctgctactgctactgctac 15419 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15436 gctgctgctactgctactgctac 15458 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15496 gctgctgctactgctactgctac 15518 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15523 gctgctgctactgctactgctac 15545 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15583 gctgctgctactgctactgctac 15605 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15631 gctgctgctactgctactgctac 15653 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15658 gctgctgctactgctactgctac 15680 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15691 gctgctgctactgctactgctac 15713 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 15784 gctgctgctactgctactgctac 15806 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 15371 ctgctgctactgctactgctac 15392 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15154 gctgctgctactgctactgct 15174 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15268 gctgctgctactgctactgct 15288 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15328 gctgctgctactgctactgct 15348 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15475 gctgctgctactgctactgct 15495 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15610 gctgctgctactgctactgct 15630
>ref|XM_717755.1| Candida albicans SC5314 putative carbamoyl-phosphate synthetase small subunit (CaO19_12100), mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 43 gctgctgctactgctactgctac 65
>gb|DQ190458.1| Mus musculus MMP20 (Mmp20) gene, exons 1, 2 and partial cds Length = 16972 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 9248 gcagcagcagtatcagcagcagc 9270
>gb|AY738602.1| Undaria pinnatifida microsatellite Up-AC-2A8 sequence Length = 587 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ccgctgctgctactgctactgct 25 ||||||||||||||||||||||| Sbjct: 323 ccgctgctgctactgctactgct 301
>gb|AF542505.1| Ustilago maydis MAPKK kinase Kpp4 (kpp4) gene, complete cds Length = 6065 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 164 gctgctgctactgctactgctac 186
>gb|AC127421.3| Mus musculus BAC clone RP24-314F1 from chromosome 18, complete sequence Length = 170221 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 46137 gctgctgctactgctactgctac 46159
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence Length = 208028 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 140063 gcagcagcagtatcagcagcagc 140085 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 164918 ctccaccacctcctcctcctc 164898
>ref|NM_206622.2| Drosophila melanogaster CG32776-RB, transcript variant B (CG32776), mRNA Length = 3981 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 780 gcagcagcagtatcagcagcagc 802
>ref|NM_166996.2| Drosophila melanogaster CG32776-RA, transcript variant A (CG32776), mRNA Length = 3252 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 51 gcagcagcagtatcagcagcagc 73
>gb|AC164001.4| Mus musculus chromosome 7, clone RP23-332G12, complete sequence Length = 190345 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 127381 gctgctgctactgctactgctac 127359
>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence Length = 154115 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2234 tggtgacaatatttgaaacagga 2256 ||||||||||||||||||||||| Sbjct: 12380 tggtgacaatatttgaaacagga 12358
>ref|NM_001038741.1| Drosophila melanogaster CG32776-RC, transcript variant C (CG32776), mRNA Length = 3255 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 51 gcagcagcagtatcagcagcagc 73
>ref|NM_001038740.1| Drosophila melanogaster CG32776-RD, transcript variant D (CG32776), mRNA Length = 3984 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 780 gcagcagcagtatcagcagcagc 802
>gb|AC158467.3| Mus musculus chromosome 3, clone RP23-116C1, complete sequence Length = 173252 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 169580 gctgctgctactgctactgctac 169602
>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160100 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 38829 gcagcagcagtatcagcagcagc 38851
>ref|NM_001031276.1| Gallus gallus vitellogenin (LOC424533), mRNA Length = 5553 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 3612 gctgctgctactgctactgctac 3590
>ref|XM_757358.1| Ustilago maydis 521 hypothetical protein (UM06304.1) partial mRNA Length = 4350 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 3736 gctgctgctactgctactgctac 3758
>gb|AY122142.1| Drosophila melanogaster HL02867 full insert cDNA Length = 3251 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 51 gcagcagcagtatcagcagcagc 73
>emb|X13607.1|GGVITIIG Chicken vitellogenin II gene Length = 20343 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 11405 gctgctgctactgctactgctac 11383
>emb|AL626770.9| Mouse DNA sequence from clone RP23-379J18 on chromosome 11 Contains a novel gene and a serine/arginine repetitive matrix 1 (Srrm1) pseudogene, complete sequence Length = 188854 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 66679 gcagcagcagtatcagcagcagc 66657
>gb|AY805231.1| Fonscochlea accepta clone Sn49 microsatellite sequence Length = 224 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 117 gctgctgctactgctactgctac 95 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 138 gctgctgctactgctactgct 118
>gb|AC079753.7| Homo sapiens BAC clone RP11-67L14 from 2, complete sequence Length = 154214 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 27644 gctgctgctactgctactgctac 27622
>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174195 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 87286 gctgctgctactgctactgctac 87308
>gb|AC103945.12| Mus musculus chromosome 3, clone RP23-126A18, complete sequence Length = 205072 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 49430 gctgctgctactgctactgctac 49452
>emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chromosome X, complete sequence Length = 114453 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 7983 gctgctgctactgctactgctac 7961
>emb|AL603630.11| Mouse DNA sequence from clone RP23-350M23 on chromosome 9, complete sequence Length = 202081 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagc 1710 ||||||||||||||||||||||| Sbjct: 72572 gcagcagcagtatcagcagcagc 72594 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 97427 ctccaccacctcctcctcctc 97407
>emb|AL807234.6| Mouse DNA sequence from clone RP23-293E12 on chromosome 4, complete sequence Length = 226546 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 81612 gctgctgctactgctactgctac 81634
>gb|K02113.1|CHKVITB Gallus gallus vitellogenin gene coding for phosvitin, exons 23 and 24 Length = 1515 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 469 gctgctgctactgctactgctac 447
>gb|M18060.1|CHKVITC Chicken vitellogenin gene, complete cds Length = 5791 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgctac 27 ||||||||||||||||||||||| Sbjct: 3631 gctgctgctactgctactgctac 3609
>gb|AY858986.1| Chlamydomonas incerta minus agglutinin (SAD1) gene, complete cds Length = 21171 Score = 46.1 bits (23), Expect = 0.56 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagcagccgat 1714 |||||||||||| |||||||||||||| Sbjct: 4646 gcagcagcagtagcagcagcagccgat 4672
>emb|CT834666.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA016F12, full insert sequence Length = 1128 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 319 ctccaccacctcctcctcctca 298
>ref|XM_001224680.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07025) mRNA, complete cds Length = 4053 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1785 ctccaccacctcctcctcctca 1764
>dbj|AK242778.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090054J19, full insert sequence Length = 1689 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 1464 ctgctgctactgctactgctac 1485
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 347 caccaccgtcagcatcgccaaagtgaacagcgac 380 ||||| |||||||||||| || |||||||||||| Sbjct: 2800634 caccagcgtcagcatcgcgaaggtgaacagcgac 2800601
>ref|NM_001060860.1| Oryza sativa (japonica cultivar-group) Os04g0686200 (Os04g0686200) mRNA, complete cds Length = 3785 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 29 actccaccacctcctcctcctc 50
>ref|NM_001055073.1| Oryza sativa (japonica cultivar-group) Os02g0819900 (Os02g0819900) mRNA, complete cds Length = 1284 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 203 actccaccacctcctcctcctc 224
>gb|AY644517.4| Bos taurus T cell receptor gamma cluster 1 (TCRG1) gene, complete sequence Length = 243699 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 94751 ctgctgctactgctactgctac 94772 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 117286 ctgctgctactgctactgctac 117307
>ref|XM_525805.2| PREDICTED: Pan troglodytes jumonji domain containing 1A (JMJD1A), mRNA Length = 5898 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 65 cctcccccgcctcccgcctccc 44
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1262 atcaactccaccacctcctcctcctc 1287 |||| ||||||||||||||||||||| Sbjct: 23762830 atcatctccaccacctcctcctcctc 23762855 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 15015993 gctgctgctactgctactgct 15015973 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 17932348 gctgctgctactgctactgct 17932328 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 21015925 ctccaccacctcctcctcctc 21015905
>dbj|AK226356.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-16-N16 Length = 2171 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1825 ctccaccacctcctcctcctca 1846
>dbj|AK230331.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-17-G16 Length = 2086 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1800 ctccaccacctcctcctcctca 1821
>gb|AC187044.2| Medicago truncatula clone mth2-135j6, complete sequence Length = 99871 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 47141 ctgctgctactgctactgctac 47162
>gb|AC174308.7| Medicago truncatula clone mth2-139i23, complete sequence Length = 114303 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 39988 ctgctgctactgctactgctac 40009
>ref|XM_001071968.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684795 (LOC684795), mRNA Length = 1137 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 401 ctgctgctactgctactgctac 380 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 695 ctgctgctactgctactgctac 674 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 878 ctgctgctactgctactgctac 857
>ref|XM_001068112.1| PREDICTED: Rattus norvegicus hypothetical protein LOC688741 (LOC688741), mRNA Length = 765 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 323 ctgctgctactgctactgctac 302 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 506 ctgctgctactgctactgctac 485
>emb|CT025900.11| Zebrafish DNA sequence from clone DKEY-10O6 in linkage group 18, complete sequence Length = 126992 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 1127 ctgctgctactgctactgctac 1106
>gb|DQ195503.1| Fragaria x ananassa GAI/RGA-like protein (GAI) mRNA, partial cds Length = 816 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 437 actccaccacctcctcctcctc 458
>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence Length = 131049 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1162 tgcaagccatggaagattatgtgagagatgctcc 1195 |||||||||||||||| ||||| | ||||||||| Sbjct: 51157 tgcaagccatggaagactatgtcaaagatgctcc 51124
>gb|BT025221.1| Drosophila melanogaster FI01019 full insert cDNA Length = 4601 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1262 atcaactccaccacctcctcctcctc 1287 |||| ||||||||||||||||||||| Sbjct: 649 atcatctccaccacctcctcctcctc 624
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 64808 actccaccacctcctcctcctc 64787
>ref|NM_180592.1| Arabidopsis thaliana unknown protein (AT5G48385) mRNA, complete cds Length = 2233 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1823 ctccaccacctcctcctcctca 1844
>ref|XM_632655.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0186969) mRNA, complete cds Length = 1911 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 1253 ctgctgctactgctactgctac 1232
>ref|XM_635835.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0204126) mRNA, complete cds Length = 8193 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1687 tgcagcagcagtatcagcagca 1708 |||||||||||||||||||||| Sbjct: 1959 tgcagcagcagtatcagcagca 1980
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1262 atcaactccaccacctcctcctcctc 1287 |||| ||||||||||||||||||||| Sbjct: 48879 atcatctccaccacctcctcctcctc 48904
>ref|NM_018433.3| Homo sapiens jumonji domain containing 1A (JMJD1A), mRNA Length = 4718 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 130 cctcccccgcctcccgcctccc 109
>gb|AY588385.1| Humulus lupulus clone HlCAG11 microsatellite sequence Length = 404 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 239 ctgctgctactgctactgctac 260
>gb|AF413051.1|AF413050S2 Zea mays CAG and TAG long trinucleotide repeat Length = 666 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 263 ctgctgctactgctactgctac 242
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1662 tcatcggctcccacggcgtcga 1683 |||||||||||||||||||||| Sbjct: 1375197 tcatcggctcccacggcgtcga 1375176
>ref|XM_601209.2| PREDICTED: Bos taurus similar to two AAA domain containing protein, transcript variant 1 (LOC522920), mRNA Length = 5241 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgcta 26 |||||||||||||||||||||| Sbjct: 4803 gctgctgctactgctactgcta 4824
>ref|XM_864276.1| PREDICTED: Bos taurus similar to two AAA domain containing protein, transcript variant 2 (LOC522920), mRNA Length = 5619 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgcta 26 |||||||||||||||||||||| Sbjct: 5181 gctgctgctactgctactgcta 5202
>ref|XM_616193.2| PREDICTED: Bos taurus similar to jumonji domain containing 1A (LOC536073), mRNA Length = 5737 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 165 cctcccccgcctcccgcctccc 144
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 144577 ctgctgctactgctactgctac 144598
>ref|XM_456029.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F21142g predicted mRNA Length = 789 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 209 ctgctgctactgctactgctac 188
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 179748 agcgagcgagcgagcgagcaagcaagcaag 179719
>ref|NM_170360.1| Drosophila melanogaster Mes-4 CG4976-RA (Mes-4), mRNA Length = 4585 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1262 atcaactccaccacctcctcctcctc 1287 |||| ||||||||||||||||||||| Sbjct: 649 atcatctccaccacctcctcctcctc 624
>gb|AC121936.2| Mus musculus BAC clone RP24-207J5 from 13, complete sequence Length = 157713 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 13933 ctgctgctactgctactgctac 13954
>gb|BC038297.2| Homo sapiens jumonji domain containing 1A, mRNA (cDNA clone MGC:33567 IMAGE:4823253), complete cds Length = 4731 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 79 cctcccccgcctcccgcctccc 58
>gb|AC169373.2| Sorghum bicolor clone SB_BBc0188M08, complete sequence Length = 137889 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 gaagtatgtgggcgccctcaag 341 |||||||||||||||||||||| Sbjct: 46681 gaagtatgtgggcgccctcaag 46702
>gb|BT000104.1| Arabidopsis thaliana putative protein (At5g48390) mRNA, complete cds Length = 1796 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1562 ctccaccacctcctcctcctca 1583
>gb|AY136326.1| Arabidopsis thaliana putative protein (At5g48390) mRNA, complete cds Length = 2112 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1768 ctccaccacctcctcctcctca 1789
>gb|AY118404.1| Drosophila melanogaster RE61305 full insert cDNA Length = 4597 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1262 atcaactccaccacctcctcctcctc 1287 |||| ||||||||||||||||||||| Sbjct: 649 atcatctccaccacctcctcctcctc 624
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 5381314 ctgctgctactgctactgctac 5381293 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 3688823 ctccaccacctcctcctcctc 3688803 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 19781829 ctccaccacctcctcctcctc 19781849
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 35109643 actccaccacctcctcctcctc 35109622 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 13233913 ctccaccacctcctcctcctc 13233893 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 24121350 gctgctgctactgctactgct 24121330 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 27441463 ctccaccacctcctcctcctc 27441483
>emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chromosome 9, complete sequence Length = 142368 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2136 caggggaagtatttttccccggctatttct 2165 ||||||||||||||||||| |||| ||||| Sbjct: 122895 caggggaagtatttttcccaggctgtttct 122924
>gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome 16, complete sequence Length = 166416 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 9734 agcgagcgagcgagcgagcaagcaagcaag 9763
>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence Length = 223196 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 107708 agcgagcgagcgagcgagcaagcaagcaag 107737
>emb|CR749581.1| Homo sapiens mRNA; cDNA DKFZp686A24246 (from clone DKFZp686A24246) Length = 4675 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 70 cctcccccgcctcccgcctccc 49
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 1972418 ctgctgctactgctactgctac 1972439
>emb|AL832150.1|HSM803457 Homo sapiens mRNA; cDNA DKFZp686P07111 (from clone DKFZp686P07111) Length = 6587 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 68 cctcccccgcctcccgcctccc 47
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 46146 actccaccacctcctcctcctc 46125
>emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H13, complete sequence Length = 191668 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgcta 26 |||||||||||||||||||||| Sbjct: 67158 gctgctgctactgctactgcta 67137
>emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in linkage group 18, complete sequence Length = 215124 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 874 ctgctgctactgctactgctac 895
>gb|AC102189.13| Mus musculus chromosome 8, clone RP24-216J7, complete sequence Length = 136839 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1688 gcagcagcagtatcagcagcag 1709 |||||||||||||||||||||| Sbjct: 45380 gcagcagcagtatcagcagcag 45359
>gb|AF190100.1|AF190100 Piper nigrum phytochrome A (PHYA) gene, partial cds Length = 1344 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cgctgctgctactgctactgct 25 |||||||||||||||||||||| Sbjct: 621 cgctgctgctactgctactgct 642
>emb|BX640698.1|HSM806767 Homo sapiens mRNA; cDNA DKFZp686I1725 (from clone DKFZp686I1725) Length = 4757 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 103 cctcccccgcctcccgcctccc 82
>dbj|AK176205.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL23-08-D12 Length = 2105 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 1754 ctccaccacctcctcctcctca 1775
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 115678 ctgctgctactgctactgctac 115657
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 35756 actccaccacctcctcctcctc 35777
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 119062 actccaccacctcctcctcctc 119083
>dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7 Length = 74298 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctca 1288 |||||||||||||||||||||| Sbjct: 7016 ctccaccacctcctcctcctca 7037
>dbj|AK121864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103C22, full insert sequence Length = 3786 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1266 actccaccacctcctcctcctc 1287 |||||||||||||||||||||| Sbjct: 30 actccaccacctcctcctcctc 51
>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E02 Length = 139321 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 15295 ctgctgctactgctactgctac 15274
>emb|AL112825.1|CNS01AE9 Botrytis cinerea strain T4 cDNA library Length = 636 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1686 atgcagcagcagtatcagcagcagcc 1711 |||||||||||||| ||||||||||| Sbjct: 138 atgcagcagcagtagcagcagcagcc 113
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8, complete sequence Length = 234864 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1258 aagcatcaactccaccacctcctcctcctc 1287 |||||||| | ||||||||||||||||||| Sbjct: 202264 aagcatcagcgccaccacctcctcctcctc 202235
>emb|BX649109.1|HSM809261 Homo sapiens mRNA; cDNA DKFZp686B22109 (from clone DKFZp686B22109) Length = 8760 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 72 cctcccccgcctcccgcctccc 51
>emb|BX647271.1|HSM807415 Homo sapiens mRNA; cDNA DKFZp686K1093 (from clone DKFZp686K1093) Length = 4679 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 71 cctcccccgcctcccgcctccc 50
>emb|BX647752.1|HSM807898 Homo sapiens mRNA; cDNA DKFZp686C2431 (from clone DKFZp686C2431) Length = 4754 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 131 cctcccccgcctcccgcctccc 110
>gb|AC174448.2| Mus musculus BAC clone RP23-204P24 from chromosome 16, complete sequence Length = 198814 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 16876 agcgagcgagcgagcgagcaagcaagcaag 16847
>emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 in linkage group 6, complete sequence Length = 187638 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1258 aagcatcaactccaccacctcctcctcctc 1287 |||||||| | ||||||||||||||||||| Sbjct: 157471 aagcatcagcgccaccacctcctcctcctc 157442
>emb|AL157858.5|CNS01RGA Human chromosome 14 DNA sequence BAC R-187A6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188327 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2218 ttaaattctgtaaacatggtga 2239 |||||||||||||||||||||| Sbjct: 126774 ttaaattctgtaaacatggtga 126795
>gb|AC117775.8| Mus musculus chromosome 16, clone RP24-535F23, complete sequence Length = 127815 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 94301 agcgagcgagcgagcgagcaagcaagcaag 94330
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 cttctccagcgagcgagcgagc 97 |||||||||||||||||||||| Sbjct: 52 cttctccagcgagcgagcgagc 73
>gb|AC124718.4| Mus musculus BAC clone RP23-373N7 from 1, complete sequence Length = 201807 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 151363 agcgagcgagcgagcgagcaagcaagcaag 151334
>emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chromosome 16, complete sequence Length = 256007 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 110188 agcgagcgagcgagcgagcaagcaagcaag 110217
>emb|AL591665.15| Mouse DNA sequence from clone RP23-333A18 on chromosome 2, complete sequence Length = 181419 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgcta 26 |||||||||||||||||||||| Sbjct: 86123 gctgctgctactgctactgcta 86144
>emb|AL672278.12| Mouse DNA sequence from clone RP23-465H23 on chromosome 16, complete sequence Length = 187418 Score = 44.1 bits (22), Expect = 2.2 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 83 agcgagcgagcgagcgag-aagcaagcaag 111 |||||||||||||||||| ||||||||||| Sbjct: 41174 agcgagcgagcgagcgagcaagcaagcaag 41203
>emb|AJ005115.2|BGAJ5115 Blattella germanica mRNA for vitellogenin, complete CDS Length = 5749 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgctac 27 |||||||||||||||||||||| Sbjct: 1037 ctgctgctactgctactgctac 1016
>dbj|AB018285.2| Homo sapiens mRNA for KIAA0742 protein, partial cds Length = 4652 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 cctcccccgcctcccgcctccc 148 |||||||||||||||||||||| Sbjct: 65 cctcccccgcctcccgcctccc 44
>ref|XM_001232200.1| PREDICTED: Gallus gallus zinc finger homeodomain 4, transcript variant 1 (ZFHX4), mRNA Length = 10816 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 9350 ctccaccacctcctcctcctc 9370
>ref|XM_425925.2| PREDICTED: Gallus gallus zinc finger homeodomain 4, transcript variant 2 (ZFHX4), mRNA Length = 10951 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 9485 ctccaccacctcctcctcctc 9505
>gb|AC147929.3| Ovis aries clone CH243-200L24, complete sequence Length = 186963 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ctgctgctactgctactgcta 26 ||||||||||||||||||||| Sbjct: 58169 ctgctgctactgctactgcta 58149
>emb|CR391945.9| Zebrafish DNA sequence from clone CH211-89I1 in linkage group 6, complete sequence Length = 103052 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2239 acaatatttgaaacaggagaa 2259 ||||||||||||||||||||| Sbjct: 49298 acaatatttgaaacaggagaa 49278
>dbj|AB083343.2| Homo sapiens ZFH-4 mRNA for zinc-finger homeodomain protein 4, complete cds Length = 11197 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 9819 ctccaccacctcctcctcctc 9839
>emb|CR855218.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0106P14, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 55199 ctccaccacctcctcctcctc 55219
>emb|CR855159.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525D09, complete sequence Length = 91911 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 78990 gctgctgctactgctactgct 78970
>ref|XM_001225692.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08037) mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 147 ctccaccacctcctcctcctc 167
>ref|XM_001225031.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07376) mRNA, complete cds Length = 1371 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 81 gctgctgctactgctactgct 61
>dbj|AK241225.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065124K23, full insert sequence Length = 1750 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 256 ctccaccacctcctcctcctc 276
>ref|NM_001042836.1| Drosophila melanogaster CG41105-RA, transcript variant A (CG41105), mRNA Length = 1026 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1682 gatgatgcagcagcagtatcagcagcagc 1710 |||||||||||||||| | |||||||||| Sbjct: 195 gatgatgcagcagcagcagcagcagcagc 223
>ref|NM_001042835.1| Drosophila melanogaster CG41105-RB, transcript variant B (CG41105), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1682 gatgatgcagcagcagtatcagcagcagc 1710 |||||||||||||||| | |||||||||| Sbjct: 403 gatgatgcagcagcagcagcagcagcagc 431
>ref|NM_001077285.1| Danio rerio zgc:153910 (zgc:153910), mRNA gb|BC124770.1| Danio rerio zgc:153910, mRNA (cDNA clone MGC:153910 IMAGE:7041090), complete cds Length = 1689 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 743 ctccaccacctcctcctcctc 763
>ref|NM_001065517.1| Oryza sativa (japonica cultivar-group) Os07g0168000 (Os07g0168000) mRNA, complete cds Length = 3102 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 84 ctccaccacctcctcctcctc 104
>ref|NM_001064037.1| Oryza sativa (japonica cultivar-group) Os06g0318300 (Os06g0318300) mRNA, complete cds Length = 1207 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 316 ctccaccacctcctcctcctc 296
>ref|NM_001061584.1| Oryza sativa (japonica cultivar-group) Os05g0268400 (Os05g0268400) mRNA, complete cds Length = 1245 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1264 caactccaccacctcctcctc 1284 ||||||||||||||||||||| Sbjct: 41 caactccaccacctcctcctc 61
>ref|NM_001059656.1| Oryza sativa (japonica cultivar-group) Os04g0483000 (Os04g0483000) mRNA, complete cds Length = 738 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 181 gctgctgctactgctactgct 161
>ref|NM_001057707.1| Oryza sativa (japonica cultivar-group) Os03g0733000 (Os03g0733000) mRNA, complete cds Length = 494 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ccagcgagcgagcgagcgaga 101 ||||||||||||||||||||| Sbjct: 18 ccagcgagcgagcgagcgaga 38
>ref|NM_001056754.1| Oryza sativa (japonica cultivar-group) Os03g0376000 (Os03g0376000) mRNA, complete cds Length = 1061 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 167 ctccaccacctcctcctcctc 187
>ref|NM_001054523.1| Oryza sativa (japonica cultivar-group) Os02g0726000 (Os02g0726000) mRNA, complete cds Length = 1256 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 65 ctccaccacctcctcctcctc 85
>ref|XM_001214339.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_05161) mRNA, complete cds Length = 1857 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1686 atgcagcagcagtatcagcagcagc 1710 |||||||||||| |||||||||||| Sbjct: 637 atgcagcagcagcatcagcagcagc 661
>gb|AC183304.14| Medicago truncatula chromosome 8 clone mth2-68f12, complete sequence Length = 128668 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1261 catcaactccaccacctcctc 1281 ||||||||||||||||||||| Sbjct: 96486 catcaactccaccacctcctc 96466
>ref|XR_021469.1| PREDICTED: Pan troglodytes similar to Myeloma overexpressed gene (in a subset of t(11;14) positive multiple myelomas) (LOC746989), mRNA Length = 2131 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 902 ctccaccacctcctcctcctc 922
>ref|XR_024967.1| PREDICTED: Pan troglodytes similar to zinc-finger homeodomain protein 4 (LOC464241), mRNA Length = 13655 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 9581 ctccaccacctcctcctcctc 9601
>ref|XR_025591.1| PREDICTED: Pan troglodytes ALMS1 (ALMS1), mRNA Length = 12869 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 63 ctccaccacctcctcctcctc 43
>ref|XM_001147705.1| PREDICTED: Pan troglodytes hypothetical protein LOC743662 (LOC743662), mRNA Length = 1251 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 635 ctccaccacctcctcctcctc 655
>ref|XM_530810.2| PREDICTED: Pan troglodytes hypothetical LOC461884, transcript variant 2 (LOC461884), mRNA Length = 2550 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 905 ctccaccacctcctcctcctc 885
>ref|XM_001138655.1| PREDICTED: Pan troglodytes hypothetical LOC461884, transcript variant 1 (LOC461884), mRNA Length = 839 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 753 ctccaccacctcctcctcctc 733
>gb|CP000220.2| Drosophila melanogaster genomic scaffold 211000022280793 Length = 708693 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1688 gcagcagcagtatcagcagca 1708 ||||||||||||||||||||| Sbjct: 521127 gcagcagcagtatcagcagca 521147
>gb|AF213884.2|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (NFKB1), mannosidase, beta A, lysosomal (MANBA), and ubiquitin-conjugating enzyme E2D 3 (UBE2D3) genes, complete cds Length = 456841 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 349527 ctccaccacctcctcctcctc 349547
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1685 gatgcagcagcagtatcagcagcag 1709 ||||||||||||||| ||||||||| Sbjct: 14885953 gatgcagcagcagtagcagcagcag 14885929 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 19151634 ctccaccacctcctcctcctc 19151654
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1686 atgcagcagcagtatcagcagcagc 1710 ||||||||||||| ||||||||||| Sbjct: 17225990 atgcagcagcagtctcagcagcagc 17226014
>emb|CT868733.7| Mouse DNA sequence from clone RP23-407E9 on chromosome 12, complete sequence Length = 119734 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1686 atgcagcagcagtatcagcagcagc 1710 |||||||||||||| |||||||||| Sbjct: 80350 atgcagcagcagtagcagcagcagc 80326
>gb|AC189586.1| Brassica rapa subsp. pekinensis clone KBrH012I05, complete sequence Length = 104698 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 71017 ctccaccacctcctcctcctc 71037
>gb|AC189360.1| Brassica rapa subsp. pekinensis clone KBrB045B23, complete sequence Length = 114374 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agcgagcgagcgagcgagaag 103 ||||||||||||||||||||| Sbjct: 57430 agcgagcgagcgagcgagaag 57410
>emb|BX927210.9| Zebrafish DNA sequence from clone DKEY-126G1 in linkage group 23, complete sequence Length = 175627 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 35953 ctccaccacctcctcctcctc 35933
>gb|DQ103309.1| Phytophthora ramorum clone E07,9A microsatellite 97 sequence Length = 257 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 cgctgctgctactgctactgctacgactc 32 |||||||||| ||||||||||||| |||| Sbjct: 109 cgctgctgctgctgctactgctactactc 137
>gb|DQ103307.1| Phytophthora ramorum clone C07,5A microsatellite 97 sequence Length = 216 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 cgctgctgctactgctactgctacgactc 32 |||||||||| ||||||||||||| |||| Sbjct: 109 cgctgctgctgctgctactgctactactc 137
>ref|XM_001057811.1| PREDICTED: Rattus norvegicus bromodomain, testis-specific (Brdt), mRNA Length = 3219 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 2358 gctgctgctactgctactgct 2338
>ref|XM_573544.2| PREDICTED: Rattus norvegicus bromodomain, testis-specific (Brdt), mRNA Length = 3219 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 2358 gctgctgctactgctactgct 2338
>ref|XM_001069847.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684317 (LOC684317), mRNA Length = 519 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 357 ctccaccacctcctcctcctc 337
>ref|XM_001071233.1| PREDICTED: Rattus norvegicus hypothetical protein LOC689571 (LOC689571), mRNA Length = 516 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 105 gctgctgctactgctactgct 85 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 123 gctgctgctactgctactgct 103
>ref|XM_001114253.1| PREDICTED: Macaca mulatta similar to chromosome 2 open reading frame 30, transcript variant 1 (LOC716460), mRNA Length = 3317 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 128 ctccaccacctcctcctcctc 148
>ref|XM_001114270.1| PREDICTED: Macaca mulatta similar to chromosome 2 open reading frame 30, transcript variant 2 (LOC716460), mRNA Length = 3233 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 128 ctccaccacctcctcctcctc 148
>ref|XM_001114290.1| PREDICTED: Macaca mulatta similar to chromosome 2 open reading frame 30, transcript variant 3 (LOC716460), mRNA Length = 3395 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 128 ctccaccacctcctcctcctc 148
>ref|XM_001089817.1| PREDICTED: Macaca mulatta similar to zinc finger homeodomain 4 (LOC701524), mRNA Length = 12357 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 8258 ctccaccacctcctcctcctc 8278
>gb|AC186768.1| Pongo pygmaeus abelii chromosome UNK clone CH276-59H12, complete sequence Length = 225797 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 tccagcgagcgagcgagcgag 100 ||||||||||||||||||||| Sbjct: 133049 tccagcgagcgagcgagcgag 133069
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 111244 ctccaccacctcctcctcctc 111264
>ref|NM_198461.2| Homo sapiens LON peptidase N-terminal domain and ring finger 2 (LONRF2), mRNA Length = 12516 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ccgtgcccggcccatctcccc 213 ||||||||||||||||||||| Sbjct: 5400 ccgtgcccggcccatctcccc 5420
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 376204 gctgctgctactgctactgct 376224
>ref|XM_981667.1| PREDICTED: Mus musculus similar to CAGL79 (LOC381742), mRNA Length = 2919 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 1629 gctgctgctactgctactgct 1609
>ref|XM_355727.4| PREDICTED: Mus musculus similar to CAGL79 (LOC381742), mRNA Length = 2919 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 1629 gctgctgctactgctactgct 1609
>gb|AC185533.1| Drosophila melanogaster clone BACR48D21, complete sequence Length = 95808 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1682 gatgatgcagcagcagtatcagcagcagc 1710 |||||||||||||||| | |||||||||| Sbjct: 21263 gatgatgcagcagcagcagcagcagcagc 21291
>emb|CT573179.5| Zebrafish DNA sequence from clone CH73-76G6 in linkage group 18, complete sequence Length = 55919 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 1497 ctccaccacctcctcctcctc 1477
>gb|DQ103308.1| Phytophthora ramorum clone D07,7A microsatellite 97 sequence Length = 303 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 cgctgctgctactgctactgctacgactc 32 |||||||||| ||||||||||||| |||| Sbjct: 109 cgctgctgctgctgctactgctactactc 137
>ref|XM_964999.1| PREDICTED: Tribolium castaneum similar to CG4778-PA (LOC658624), partial mRNA Length = 1509 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 215 gctgctgctactgctactgct 195 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 581 gctgctgctactgctactgct 561
>ref|XM_964631.1| PREDICTED: Tribolium castaneum similar to Protein cappuccino (LOC658225), mRNA Length = 3036 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ggcggcggccccgtgcccggc 203 ||||||||||||||||||||| Sbjct: 1583 ggcggcggccccgtgcccggc 1563
>ref|XM_962326.1| PREDICTED: Tribolium castaneum similar to CG4778-PA (LOC655764), mRNA Length = 1146 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 297 gctgctgctactgctactgct 277 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 663 gctgctgctactgctactgct 643 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 1029 gctgctgctactgctactgct 1009
>ref|XM_968324.1| PREDICTED: Tribolium castaneum similar to CG3126-PA, isoform A (LOC662211), mRNA Length = 3192 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 1416 gctgctgctactgctactgct 1396
>ref|XM_368407.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00837.4) partial mRNA Length = 1878 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgctgctactgctactgctac 27 ||||||||||||||||||||| Sbjct: 1240 tgctgctactgctactgctac 1220
>ref|XM_360078.1| Magnaporthe grisea 70-15 predicted protein (MG05453.4) partial mRNA Length = 504 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 111 gctgctgctactgctactgct 91
>ref|NM_103283.1| Arabidopsis thaliana unknown protein (AT1G35830) mRNA, complete cds Length = 909 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 251 ctccaccacctcctcctcctc 271
>ref|NM_122911.3| Arabidopsis thaliana binding (AT5G35200) mRNA, complete cds Length = 2149 Score = 42.1 bits (21), Expect = 8.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 546 aactgggcggttgcactcaagacgctaattgtgatacaccgtgcc 590 ||||||||||||||||| || || || ||||| || ||||||||| Sbjct: 475 aactgggcggttgcactgaaaactcttattgttattcaccgtgcc 519
>ref|NM_120215.2| Arabidopsis thaliana unknown protein (AT5G01370) mRNA, complete cds Length = 1385 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 257 ctccaccacctcctcctcctc 277
>ref|NM_106208.1| Arabidopsis thaliana unknown protein (AT1G75550) mRNA, complete cds Length = 504 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 307 ctccaccacctcctcctcctc 287
>gb|BC085610.1| Homo sapiens zinc finger homeodomain 4, mRNA (cDNA clone IMAGE:30708384), partial cds Length = 3115 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 377 ctccaccacctcctcctcctc 397
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 95194 ctccaccacctcctcctcctc 95214 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 95275 ctccaccacctcctcctcctc 95295 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 95368 ctccaccacctcctcctcctc 95388
>gb|AY307436.1| Cebus albifrons strain AOAAE sonic hedgehog (shh) gene, promoter region and 5' UTR Length = 630 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ccagcgagcgagcgagcgaga 101 ||||||||||||||||||||| Sbjct: 486 ccagcgagcgagcgagcgaga 506
>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence Length = 171409 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 22234 ctccaccacctcctcctcctc 22254
>gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, complete sequence Length = 145902 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 64365 ctccaccacctcctcctcctc 64345 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 64398 ctccaccacctcctcctcctc 64378
>gb|AC167168.5| Mus musculus chromosome 1, clone RP23-100P14, complete sequence Length = 204256 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 157388 ctccaccacctcctcctcctc 157368
>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence Length = 223171 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 177749 ctccaccacctcctcctcctc 177769
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 128997 ctccaccacctcctcctcctc 129017
>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence Length = 183447 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 150114 gctgctgctactgctactgct 150134
>gb|AC161434.2| Mus musculus chromosome 3, clone RP23-7K18, complete sequence Length = 195815 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 5594 ctccaccacctcctcctcctc 5574
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 719413 gctgctgctactgctactgct 719433
>gb|AY225364.1| Gorilla gorilla nuclear receptor coactivator 3 (NCOA3) gene, partial cds Length = 128 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1682 gatgatgcagcagcagtatcagcagcagc 1710 |||||||||||||||| | |||||||||| Sbjct: 31 gatgatgcagcagcagcaacagcagcagc 59
>gb|AF413054.1| Zea mays CAG and TAG long trinucleotide repeat Length = 693 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 666 gctgctgctactgctactgct 646
>gb|AC154871.13| Mus musculus chromosome 1, clone RP23-354B17, complete sequence Length = 211644 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 182077 ctccaccacctcctcctcctc 182097
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 56023 ctccaccacctcctcctcctc 56043
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1264 caactccaccacctcctcctc 1284 ||||||||||||||||||||| Sbjct: 38786 caactccaccacctcctcctc 38806
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 139127 gctgctgctactgctactgct 139147
>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence Length = 183287 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 75755 gctgctgctactgctactgct 75775
>gb|AC137613.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034K10, complete sequence Length = 138925 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1264 caactccaccacctcctcctc 1284 ||||||||||||||||||||| Sbjct: 125808 caactccaccacctcctcctc 125828
>gb|AY423445.1| Anguilla japonica vitellogenin 1 (VTG1) mRNA, complete cds Length = 5356 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 3453 gctgctgctactgctactgct 3433
>gb|AC116151.10| Mus musculus chromosome 5, clone RP24-84G9, complete sequence Length = 204954 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 19982 ctccaccacctcctcctcctc 20002
>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence Length = 124394 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1261 catcaactccaccacctcctc 1281 ||||||||||||||||||||| Sbjct: 12023 catcaactccaccacctcctc 12003
>gb|AC121495.11| Mus musculus chromosome 18, clone RP24-181M14, complete sequence Length = 195507 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 119642 gctgctgctactgctactgct 119662
>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence Length = 185786 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1194 cctcttgcttcaaaaaatcaggctg 1218 ||||||||||| ||||||||||||| Sbjct: 135287 cctcttgcttctaaaaatcaggctg 135263
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 86973 ctccaccacctcctcctcctc 86993
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ccagcgagcgagcgagcgaga 101 ||||||||||||||||||||| Sbjct: 38946 ccagcgagcgagcgagcgaga 38966
>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence Length = 212792 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agcgagcgagcgagcgagaag 103 ||||||||||||||||||||| Sbjct: 115860 agcgagcgagcgagcgagaag 115840
>ref|XM_590969.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13) (LOC513306), mRNA Length = 2186 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 182 aggcggcggccccgtgcccggcccatctc 210 |||||||||||||| ||||||||| |||| Sbjct: 1320 aggcggcggccccgggcccggcccgtctc 1348
>ref|XM_873965.1| PREDICTED: Bos taurus similar to CBF1 interacting corepressor isoform 2, transcript variant 3 (LOC534057), mRNA Length = 1627 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 717 ctccaccacctcctcctcctc 737
>ref|XM_613685.2| PREDICTED: Bos taurus similar to CBF1 interacting corepressor isoform 2, transcript variant 1 (LOC534057), mRNA Length = 1795 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 885 ctccaccacctcctcctcctc 905
>ref|XM_715184.1| Candida albicans SC5314 hypothetical protein (CaO19_10273), mRNA Length = 1554 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gctgctgctactgctactgct 25 ||||||||||||||||||||| Sbjct: 424 gctgctgctactgctactgct 444
>gb|AC091353.6| Rattus norvegicus 4 BAC CH230-1B20 (Children's Hospital Oakland Research Institute) complete sequence Length = 242904 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1267 ctccaccacctcctcctcctc 1287 ||||||||||||||||||||| Sbjct: 12146 ctccaccacctcctcctcctc 12166 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 369,517,368 Number of extensions: 20707943 Number of successful extensions: 147154 Number of sequences better than 10.0: 483 Number of HSP's gapped: 147128 Number of HSP's successfully gapped: 628 Length of query: 2291 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2268 Effective length of database: 18,503,978,556 Effective search space: 41967023365008 Effective search space used: 41967023365008 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
