ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf117d17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 440 bits (222), Expect = e-120 Identities = 231/234 (98%) Strand = Plus / Plus Query: 1 ggcatcgagaagcaggtggtggccatgaactcggacccgcagctcaagaaccgcaccggg 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2494 ggcatcgagaagcaggtggtggccatgaactcggacccgcagctaaagaaccgcaccggg 2553 Query: 61 ccggccaagttcccatacatgctgctctacccaaacacctccgaccacacgggacaggcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2554 ccggccaagttcccatacatgctgctctacccaaacacctccgaccacacgggacaggcc 2613 Query: 121 gaggggctcaccgccaggggcatcccgaacagcatatccatctgatctgagcacgtccgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2614 gaggggctcaccgccaggggcatcccgaacagcatatccatctgatctgagcacgtccgt 2673 Query: 181 cgtcgagacctcatgcttttgtgctatccttgcttgcttacaccggagctagct 234 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2674 cgtggagacctcatgcctttgtgctatccttgcttgcttacaccggagctagct 2727 Score = 270 bits (136), Expect = 4e-69 Identities = 149/153 (97%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 251 acagagagttgtgccggtgcatgaataattaaggcaata----agggtgcgtgcacgacg 306 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2744 acagagagttgtgccggtgcatgaataattaaggcaataaataagggtgcgtgcacgacg 2803 Query: 307 ggtctgatcggcatgcggaagctcagctcagctggctaccggtcaatgcatcgtcgtgtg 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2804 ggtctgatcggcatgcggaagctcagctcagctggctaccggtcaatgcatcgtcgtgtg 2863 Query: 367 cagaaaaaatcccttgttttgcccaataatgaa 399 ||||||||||||||||||||||||||||||||| Sbjct: 2864 cagaaaaaatcccttgttttgcccaataatgaa 2896
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 256 bits (129), Expect = 6e-65 Identities = 156/165 (94%) Strand = Plus / Plus Query: 1 ggcatcgagaagcaggtggtggccatgaactcggacccgcagctcaagaaccgcaccggg 60 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 742 ggcatcgagaagcaggtggtggccatgaacggggacccgcggctcaagaaccgcaccggg 801 Query: 61 ccggccaagttcccatacatgctgctctacccaaacacctccgaccacacgggacaggcc 120 |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 802 ccggccaagttcccctacatgctgctctaccccaacacctccgaccacacgggccaggcc 861 Query: 121 gaggggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 862 gaggggctcacggccaggggcatccccaacagcatctccatctga 906 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 357 tcgtcgtgtgcagaaaaaatcccttgttttgcccaataatgaagtcgatg 406 ||||||||| |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 1050 tcgtcgtgtacagaaaaattcccttcatttgcccaataataaagtcgatg 1099 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 280 taaggcaataagg-gtgcgtgcacgacgggtctgatcggcatgcgg 324 ||||||||||| | ||| |||||||||||||| ||||||||||||| Sbjct: 1000 taaggcaataatgcgtgtgtgcacgacgggtccgatcggcatgcgg 1045
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 117 bits (59), Expect = 3e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 14 aggtggtggccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcc 73 ||||||||| ||||||| |||||| ||||||||||||||| ||| ||||| ||||| | Sbjct: 2506 aggtggtgggcatgaaccatgacccggagctcaagaaccgcaacggcccggctaagtttc 2565 Query: 74 catacatgctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccg 133 | ||||||||||||||||| |||||||||||||||| ||| || | ||||| |||| Sbjct: 2566 cctacatgctgctctaccccaacacctccgaccacaagggcgccgctgccgggcttaccg 2625 Query: 134 ccaggggcatcccgaacagcatatccatctgatct 168 ||| ||||||||| |||||||| ||||||| |||| Sbjct: 2626 ccaagggcatccccaacagcatctccatctaatct 2660
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 14 aggtggtggccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcc 73 ||||||||| ||||||| |||||| ||||||||||||||| ||| ||||| ||||| | Sbjct: 935 aggtggtgggcatgaaccatgacccggagctcaagaaccgcaacggcccggctaagtttc 994 Query: 74 catacatgctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccg 133 | ||||||||||||||||| |||||||||||||||| ||| || | ||||| |||| Sbjct: 995 cctacatgctgctctaccccaacacctccgaccacaagggcgccgctgccgggcttaccg 1054 Query: 134 ccaggggcatcccgaacagcatatccatct 163 ||| ||||||||| |||||||| ||||||| Sbjct: 1055 ccaagggcatccccaacagcatctccatct 1084
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 14 aggtggtggccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcc 73 ||||||||| ||||||| ||||||||||| |||||||| ||| ||||||||||||| Sbjct: 602 aggtggtgggcatgaaccacgacccgcagctgttgaaccgcaacggtccggccaagttcc 661 Query: 74 catacatgctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccg 133 | |||||| |||||||||| ||||||||||| |||| ||| |||| |||||||||| Sbjct: 662 cctacatgttgctctaccccaacacctccgatcacaagggcgccgccgccgggctcaccg 721 Query: 134 ccaggggcatcccgaacagcatatccatctga 165 | | ||||||||| |||||||| ||||||||| Sbjct: 722 ctaagggcatccccaacagcatctccatctga 753
>ref|NM_001057747.1| Oryza sativa (japonica cultivar-group) Os03g0738600 (Os03g0738600) mRNA, complete cds Length = 2927 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 22 gccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatg 81 ||||||||| |||||| || | ||||||||| ||||||| |||| ||||| |||| | Sbjct: 2584 gccatgaacaaggacccccaccgcaagaaccgtgtcgggccgaccaatttcccctacacg 2643 Query: 82 ctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccgccaggggc 141 ||||||||||||||||||||||||| || ||| | || | || ||| ||||||||||| Sbjct: 2644 ctgctctacccaaacacctccgacctcaagggcgacgctgccggcctctccgccaggggc 2703 Query: 142 atcccgaacagcatatccatctgatct 168 ||||| |||||||| |||||||||||| Sbjct: 2704 atccccaacagcatctccatctgatct 2730
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Minus Query: 22 gccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatg 81 ||||||||| |||||| || | ||||||||| ||||||| |||| ||||| |||| | Sbjct: 81445 gccatgaacaaggacccccaccgcaagaaccgtgtcgggccgaccaatttcccctacacg 81386 Query: 82 ctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccgccaggggc 141 ||||||||||||||||||||||||| || ||| | || | || ||| ||||||||||| Sbjct: 81385 ctgctctacccaaacacctccgacctcaagggcgacgctgccggcctctccgccaggggc 81326 Query: 142 atcccgaacagcatatccatctgatct 168 ||||| |||||||| |||||||||||| Sbjct: 81325 atccccaacagcatctccatctgatct 81299
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 22 gccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatg 81 ||||||||| |||||| || | ||||||||| ||||||| |||| ||||| |||| | Sbjct: 30117728 gccatgaacaaggacccccaccgcaagaaccgtgtcgggccgaccaatttcccctacacg 30117787 Query: 82 ctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccgccaggggc 141 ||||||||||||||||||||||||| || ||| | || | || ||| ||||||||||| Sbjct: 30117788 ctgctctacccaaacacctccgacctcaagggcgacgctgccggcctctccgccaggggc 30117847 Query: 142 atcccgaacagcatatccatctgatct 168 ||||| |||||||| |||||||||||| Sbjct: 30117848 atccccaacagcatctccatctgatct 30117874 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctc 101 |||||||||||||| || || ||| ||||||||||||||||||| ||||| |||||||| Sbjct: 27894308 gctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctc 27894367 Query: 102 cgac 105 |||| Sbjct: 27894368 cgac 27894371 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 27912969 gggctcaccgccatgggcatccccaacagcatctccatctga 27913010 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 27912884 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 27912940
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 22 gccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatg 81 ||||||||| |||||| || | ||||||||| ||||||| |||| ||||| |||| | Sbjct: 2552 gccatgaacaaggacccccaccgcaagaaccgtgtcgggccgaccaatttcccctacacg 2611 Query: 82 ctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccgccaggggc 141 ||||||||||||||||||||||||| || ||| | || | || ||| ||||||||||| Sbjct: 2612 ctgctctacccaaacacctccgacctcaagggcgacgctgccggcctctccgccaggggc 2671 Query: 142 atcccgaacagcatatccatctgatct 168 ||||| |||||||| |||||||||||| Sbjct: 2672 atccccaacagcatctccatctgatct 2698
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 101 bits (51), Expect = 2e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 22 gccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatg 81 ||||||||| |||||| || | ||||||||| ||||||| |||| ||||| |||| | Sbjct: 2585 gccatgaacaaggacccccaccgcaagaaccgtgtcgggccgaccaatttcccctacacg 2644 Query: 82 ctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccgccaggggc 141 ||||||||||||||||||||||||| || ||| | || | || ||| ||||||||||| Sbjct: 2645 ctgctctacccaaacacctccgacctcaagggcgacgctgccggcctctccgccaggggc 2704 Query: 142 atcccgaacagcatatccatctgatct 168 ||||| |||||||| |||||||||||| Sbjct: 2705 atccccaacagcatctccatctgatct 2731
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 674 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 733 Query: 103 gac 105 ||| Sbjct: 734 gac 736
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctcc 102 ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct: 669 ctcaagaaccgcaacgggccggccaagttcccctacacgctgctctaccccaacacctcc 728 Query: 103 gac 105 ||| Sbjct: 729 gac 731
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 14 aggtggtggccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcc 73 ||||||||| ||||||| ||||||||||| |||||||| ||| ||||||||| ||| Sbjct: 142 aggtggtgggcatgaaccacgacccgcagctgttgaaccgcaacggcccggccaagctcc 83 Query: 74 catacatgctgctctacccaaacacctccgaccacacgggacaggccgaggggctcaccg 133 | ||||||||||||||||| ||||||| ||||||| ||| |||| || ||||||| Sbjct: 82 cctacatgctgctctaccctaacacctaagaccacaagggtgccgccgccggcctcaccg 23 Query: 134 ccaggggcatcccgaacagcat 155 ||| ||||||||| |||||||| Sbjct: 22 ccaagggcatccccaacagcat 1
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 23 ccatgaactcggacccgcagctcaagaaccgcaccgggccggccaagttcccatacatgc 82 |||||||| ||||||| | ||||||||||||| ||| |||||| ||||||| |||| || Sbjct: 2480 ccatgaacgcggaccctcgcctcaagaaccgcaacggcccggccgagttcccctacacgc 2539 Query: 83 tgctctacccaaacacctccgac 105 |||||||||| |||||||||||| Sbjct: 2540 tgctctaccccaacacctccgac 2562
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 79.8 bits (40), Expect = 7e-12 Identities = 109/132 (82%) Strand = Plus / Plus Query: 34 gacccgcagctcaagaaccgcaccgggccggccaagttcccatacatgctgctctaccca 93 ||||||||||| | |||| | | ||| || ||| ||||||| ||||||||||||||||| Sbjct: 1933 gacccgcagctgaggaacaggaacggccccgccgagttcccctacatgctgctctacccc 1992 Query: 94 aacacctccgaccacacgggacaggccgaggggctcaccgccaggggcatcccgaacagc 153 |||||||| ||||||| || |||| |||||||| |||| ||||||||| |||||| Sbjct: 1993 aacacctctgaccacagtggcgccgccgcagggctcactgccaagggcatccccaacagc 2052 Query: 154 atatccatctga 165 || ||||||||| Sbjct: 2053 atctccatctga 2064
>ref|NM_001057528.1| Oryza sativa (japonica cultivar-group) Os03g0700400 (Os03g0700400) mRNA, complete cds Length = 2601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctc 101 |||||||||||||| || || ||| ||||||||||||||||||| ||||| |||||||| Sbjct: 2478 gctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctc 2537 Query: 102 cgac 105 |||| Sbjct: 2538 cgac 2541
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctc 101 |||||||||||||| || || ||| ||||||||||||||||||| ||||| |||||||| Sbjct: 47114 gctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctc 47173 Query: 102 cgac 105 |||| Sbjct: 47174 cgac 47177 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 65775 gggctcaccgccatgggcatccccaacagcatctccatctga 65816 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 65690 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 65746
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 34 gacccgcagctcaagaaccgcaccgggccggccaagttcccatacatgctgctctaccca 93 ||||||||||| | |||| | | ||| || ||| ||||||| |||||||||||||| || Sbjct: 4531 gacccgcagctgaggaacaggaacggccccgccgagttcccctacatgctgctctatccc 4590 Query: 94 aacacctccgaccacacgggacaggccgaggggctcaccgccaggggcatcccgaacagc 153 |||||||| ||||||| || |||| |||||||| |||| ||||||||| |||||| Sbjct: 4591 aacacctctgaccacagtggcgccgccgcagggctcactgccaagggcatccccaacagc 4650 Query: 154 atatccatctga 165 || ||||||||| Sbjct: 4651 atctccatctga 4662
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 34 gacccgcagctcaagaaccgcaccgggccggccaagttcccatacatgctgctctaccca 93 ||||||||||| | |||| | | ||| || ||| ||||||| |||||||||||||| || Sbjct: 2464 gacccgcagctgaggaacaggaacggccccgccgagttcccctacatgctgctctatccc 2523 Query: 94 aacacctccgaccacacgggacaggccgaggggctcaccgccaggggcatcccgaacagc 153 |||||||| ||||||| || |||| |||||||| |||| ||||||||| |||||| Sbjct: 2524 aacacctctgaccacagtggcgccgccgcagggctcactgccaagggcatccccaacagc 2583 Query: 154 atatccatctga 165 || ||||||||| Sbjct: 2584 atctccatctga 2595
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacacctc 101 |||||||||||||| || || ||| ||||||||||||||||||| ||||| |||||||| Sbjct: 10909 gctcaagaaccgcaatggcccagccgagttcccatacatgctgctttaccccaacacctc 10850 Query: 102 cgac 105 |||| Sbjct: 10849 cgac 10846
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 123 ggggctcaccgccaggggcatcccgaacagcatatccatctgatctgagca 173 |||||||||||||| ||||||||| |||||| | ||||||||| ||||||| Sbjct: 2722 ggggctcaccgccatgggcatccccaacagcgtctccatctgagctgagca 2772
>ref|NM_001057530.1| Oryza sativa (japonica cultivar-group) Os03g0700700 (Os03g0700700) mRNA, partial cds Length = 2846 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 2551 gggctcaccgccatgggcatccccaacagcatctccatctga 2592 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 2466 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 2522
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 2878 gggctcaccgccatgggcatccccaacagcatctccatctga 2919 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 2793 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 2849
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 1291 gggctcaccgccatgggcatccccaacagcatctccatctga 1332 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 1206 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 1262
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 2556 gggctcaccgccatgggcatccccaacagcatctccatctga 2597 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 2471 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 2527
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 2886 gggctcaccgccatgggcatccccaacagcatctccatctga 2927 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 2801 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 2857
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 124 gggctcaccgccaggggcatcccgaacagcatatccatctga 165 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 1456 gggctcaccgccatgggcatccccaacagcatctccatctga 1497 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 42 gctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 |||||||||||| | |||||||| ||| | || ||||||||||| ||||| ||||| Sbjct: 1371 gctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacac 1427
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgatc 167 |||| |||| ||||||||| |||||||| ||||||||||| Sbjct: 1519 tcacagccaagggcatccccaacagcatctccatctgatc 1558 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 43 ctcaagaaccgcaccgggccggccaagttcccatacatgctgctctacccaaacac 98 ||||||||||| | ||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 1431 ctcaagaaccggaatgggccagcaaaattcccctacatgctactctaccccaacac 1486
>dbj|AK241395.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065158A06, full insert sequence Length = 3155 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2880 tcaccggcatgggcatccccaacagcacatccatctgat 2918
>ref|NM_001068735.1| Oryza sativa (japonica cultivar-group) Os08g0509100 (Os08g0509100) mRNA, complete cds Length = 3193 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2935 tcaccggcatgggcatccccaacagcacatccatctgat 2973
>ref|NM_001068734.1| Oryza sativa (japonica cultivar-group) Os08g0508800 (Os08g0508800) mRNA, complete cds Length = 3004 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2856 tcaccggcatgggcatccccaacagcacatccatctgat 2894
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 catgaataattaaggcaataagg 292 ||||||||||||||||||||||| Sbjct: 94236 catgaataattaaggcaataagg 94214 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 catgaataattaaggcaataagg 292 ||||||||||||||||||||||| Sbjct: 136215 catgaataattaaggcaataagg 136193
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 25209491 tcaccggcatgggcatccccaacagcacatccatctgat 25209453 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 25242538 tcaccggcatgggcatccccaacagcacatccatctgat 25242576
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 catgaataattaaggcaataagg 292 ||||||||||||||||||||||| Sbjct: 21703060 catgaataattaaggcaataagg 21703038 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 catgaataattaaggcaataagg 292 ||||||||||||||||||||||| Sbjct: 21745039 catgaataattaaggcaataagg 21745017
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 74614 tcaccggcatgggcatccccaacagcacatccatctgat 74576 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 107661 tcaccggcatgggcatccccaacagcacatccatctgat 107699
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 17723 tcaccggcatgggcatccccaacagcacatccatctgat 17761
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full insert sequence Length = 3196 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2938 tcaccggcatgggcatccccaacagcacatccatctgat 2976
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for lipoxygenase, complete cds Length = 3007 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2853 tcaccggcatgggcatccccaacagcacatccatctgat 2891
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds Length = 2232 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2015 tcaccggcatgggcatccccaacagcacatccatctgat 2053
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds Length = 2664 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 128 tcaccgccaggggcatcccgaacagcatatccatctgat 166 |||||| || ||||||||| ||||||| ||||||||||| Sbjct: 2423 tcaccggcatgggcatccccaacagcacatccatctgat 2461
>ref|NM_001052715.1| Oryza sativa (japonica cultivar-group) Os02g0194700 (Os02g0194700) mRNA, complete cds Length = 3158 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||| ||||||||| Sbjct: 2849 aggggcatcccaaacagcatctccatctga 2878
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 136 aggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||| ||||||||| Sbjct: 5276992 aggggcatcccaaacagcatctccatctga 5276963
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 agcaggtggtggccatgaactcggac 36 |||||||||||||||||||| ||||| Sbjct: 735014 agcaggtggtggccatgaacccggac 734989
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 136 aggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||| ||||||||| Sbjct: 3295 aggggcatcccaaacagcatctccatctga 3266
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||| ||||||||| Sbjct: 2851 aggggcatcccaaacagcatctccatctga 2880
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctga 165 ||||||||||| |||||||| ||||||||| Sbjct: 2013 aggggcatcccaaacagcatctccatctga 2042
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 120 cgaggggctcaccgccaggggcatcccgaacagcatatccat 161 |||||||||||| |||| |||||| || |||||||| ||||| Sbjct: 322 cgaggggctcactgccatgggcattcccaacagcatctccat 363
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 116 aggccgaggggctcaccgccaggggcatcccgaacagcatatccat 161 ||||||||||||| || |||| |||||| || |||||||| ||||| Sbjct: 2851 aggccgaggggcttactgccatgggcattcccaacagcatctccat 2896
>gb|BT027518.1| Gasterosteus aculeatus clone CGX29-A01 mRNA sequence Length = 2257 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 tggtggccatgaactcggacccgcagctcaaga 49 ||||||||||||||||||| | |||||| |||| Sbjct: 381 tggtggccatgaactcggagctgcagctgaaga 413
>gb|BT027143.1| Gasterosteus aculeatus clone CFW183-B01 mRNA sequence Length = 2311 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 tggtggccatgaactcggacccgcagctcaaga 49 ||||||||||||||||||| | |||||| |||| Sbjct: 457 tggtggccatgaactcggagctgcagctgaaga 489
>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence Length = 37711 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 tgcagaaaaaatcccttgttt 385 ||||||||||||||||||||| Sbjct: 32585 tgcagaaaaaatcccttgttt 32565
>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24, complete sequence Length = 155584 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 agaaaaaatcccttgttttgc 388 ||||||||||||||||||||| Sbjct: 39614 agaaaaaatcccttgttttgc 39634
>gb|DQ245884.1| Zea mays clone 21692 mRNA sequence Length = 738 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctgatc 167 ||||||||||| | |||||| ||||||||||| Sbjct: 542 aggggcatccccagcagcatctccatctgatc 573
>gb|DQ459365.1| Zea mays lipoxygenase (LOX10) gene, complete cds Length = 5894 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctgatc 167 ||||||||||| | |||||| ||||||||||| Sbjct: 5198 aggggcatccccagcagcatctccatctgatc 5229
>gb|AC188789.2| Callithrix jacchus BAC clone CH259-33H12 from chromosome unknown, complete sequence Length = 191210 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cagctcagctggctaccggt 349 |||||||||||||||||||| Sbjct: 12157 cagctcagctggctaccggt 12138
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 136 aggggcatcccgaacagcatatccatctgatc 167 ||||||||||| | |||||| ||||||||||| Sbjct: 163 aggggcatccccagcagcatctccatctgatc 132
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 aggggcatcccgaacagcatatccatctgatc 167 ||||||||||| | |||||| ||||||||||| Sbjct: 1185 aggggcatccccagcagcatctccatctgatc 1216 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 58,589,279 Number of extensions: 2778308 Number of successful extensions: 230657 Number of sequences better than 10.0: 70 Number of HSP's gapped: 230655 Number of HSP's successfully gapped: 94 Length of query: 438 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 416 Effective length of database: 18,508,616,841 Effective search space: 7699584605856 Effective search space used: 7699584605856 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)
