| Clone Name | FLbaf120e24 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g36090:12007.t03281:unspliced-genomic 60S ribosomal protein L24, mitochondrial precursor, putative,| expressed Length = 4898 Score = 241 bits (520), Expect(2) = 2e-95 Identities = 99/116 (85%), Positives = 103/116 (88%) Frame = +2 / +2 Query: 302 KSRRNWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKMDTEMGI 481 +SRR WKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKMDTEMG+ Sbjct: 1340 RSRRTWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKMDTEMGV 1519 Query: 482 AWKAKIEKMYSDLAGMEVGFFHPEEEAKIEQGLEEVRSAKREFRSESRRALGLTKQ 649 AWKAKIEKMYS LA MEVGFF PEEE KIEQG EE R+AKRE R E+RRAL Q Sbjct: 1520 AWKAKIEKMYSQLAQMEVGFFSPEEETKIEQGFEEARAAKREHRREARRALAKQTQ 1687 Score = 134 bits (288), Expect(2) = 2e-95 Identities = 55/63 (87%), Positives = 62/63 (98%) Frame = +2 / +2 Query: 116 AREIYKKVVRRVGGEGKLPAEVMDTVKSILPNSKVVMGRAKRGIFAGRHIQFGNKVSEDG 295 ARE+YKKVVRRVGGEGKLPAE+M +VK++LP+SKVVMGRAKRGI+AGRHIQFGNKVSEDG Sbjct: 146 AREMYKKVVRRVGGEGKLPAELMASVKNLLPDSKVVMGRAKRGIYAGRHIQFGNKVSEDG 325 Query: 296 GNK 304 GNK Sbjct: 326 GNK 334 Score = 199 bits (429), Expect(4) = 4e-85 Identities = 96/111 (86%), Positives = 97/111 (87%) Frame = -2 / -3 Query: 633 KALLDSLRNSLLADRTSSRPCSILASSSGWKKPTSIPARSEYIFSIFAFQAIPISVSILL 454 KALL SLR SLLA R SS+PCSIL SSSG KKPTSI A EYIFSIFAFQA PISVSILL Sbjct: 1671 KALLASLRCSLLAARASSKPCSILVSSSGEKKPTSI*ASCEYIFSIFAFQATPISVSILL 1492 Query: 453 *GVFRRYSSIPPALSMHRSA*VVTLTLMCRS*I*LKRRFS*TFGFQFRLDL 301 *GVFRRYSSIPPALSMHR A VVTLTLMCRS*I*LKRRFS*TFGF RLDL Sbjct: 1491 *GVFRRYSSIPPALSMHRRAWVVTLTLMCRS*I*LKRRFS*TFGFHVRLDL 1339 Score = 136 bits (292), Expect(4) = 4e-85 Identities = 58/67 (86%), Positives = 60/67 (89%) Frame = -2 / -3 Query: 303 LLPPSSETLLPNWMWRPAKMPRLARPMTTLLFGSMLFTVSITSAGSFPSPPTRRTTFL*I 124 LLPPSSETLLPNWMWRPA MPRLA PMTTLL GS FT +I+SAGSFPSPPTRRTTFL I Sbjct: 333 LLPPSSETLLPNWMWRPA*MPRLALPMTTLLSGSKFFTDAISSAGSFPSPPTRRTTFLYI 154 Query: 123 SRARNDI 103 SRARNDI Sbjct: 153 SRARNDI 133 Score = 27.6 bits (54), Expect(4) = 4e-85 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 / -2 Query: 694 FRCFVIISFSCF*LTLLCQTQS 629 F CFV S + F*L+LL Q+ S Sbjct: 1726 FSCFVTTSVTSF*LSLLSQSSS 1661 Score = 23.5 bits (45), Expect(4) = 4e-85 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 / -2 Query: 757 APRSKLRFLCDIRHLFIC 704 A RSKL C+IR F C Sbjct: 1771 ADRSKLGLHCNIRSSFSC 1718 Score = 178 bits (384), Expect(2) = 1e-52 Identities = 76/111 (68%), Positives = 85/111 (76%) Frame = -3 / -1 Query: 635 PKPFLIRCGTLFWPIEPPRDPALS*PLPRDGRSQLPSQLDLNTSSQSLPSRLFPSQYPFC 456 PK FL+ CG L W +EPP++P S* LP++ RS P +L +NTSSQSLPSRL PSQYPFC Sbjct: 1673 PKLFLLPCGALSWQLEPPQNPVRS*SLPQERRSLPPFELAVNTSSQSLPSRLPPSQYPFC 1494 Query: 455 CKVSSGGIHRSHQLCRCTGVHEWLL*L*CVGHEYS*KDVSPERLASSFALT 303 CKVSSGGI SHQLC+CT H WL * *C G EYS*KD SPE LAS FALT Sbjct: 1493 CKVSSGGIRLSHQLCQCTEEHGWLP*P*CAGREYS*KDASPEHLASMFALT 1341 Score = 54.2 bits (112), Expect(2) = 1e-52 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = -1 / -2 Query: 253 GEDAALGPAHDDLAIREYALHRVHHLRRQ 167 G DAALGP HDDLA+R+ LHR H LRRQ Sbjct: 283 GVDAALGPPHDDLAVRQQVLHRRHQLRRQ 197 Score = 136 bits (292), Expect(3) = 2e-38 Identities = 59/80 (73%), Positives = 63/80 (78%) Frame = +1 / +1 Query: 304 VKAKLEAKRSGETSFQLYS*PTH*SQSNHSCTPVHRQSWWDR*IPPEDTLQQNGY*DGNS 483 VKA +EAK SGE SF LYS P H* Q NH C+ VH QSWWDR IPPEDTLQQNGY*DG S Sbjct: 1342 VKANMEAKCSGEASF*LYSRPAH*GQGNHPCSSVH*QSWWDRRIPPEDTLQQNGY*DGGS 1521 Query: 484 LEGKD*EDVFRSSWDGSWLL 543 LEGKD*EDVF +S +G LL Sbjct: 1522 LEGKD*EDVFTASSNGGRLL 1581 Score = 46.9 bits (96), Expect(3) = 2e-38 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = +1 / +1 Query: 214 QGRHGPGQARHLRRPPHPV 270 QGRHG GQARHLRR PHPV Sbjct: 244 QGRHGEGQARHLRRTPHPV 300 Score = 24.4 bits (47), Expect(3) = 2e-38 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +3 / +3 Query: 597 PKESSAANQEGLWV 638 P+ES+A QE LW+ Sbjct: 1635 PRESTAGKQEELWL 1676 Score = 156 bits (335), Expect = 3e-37 Identities = 70/110 (63%), Positives = 79/110 (71%) Frame = -1 / -2 Query: 637 TQSPS*FAAELSFGRSNXXXXXXXXXXXLGMEEANFHPS*I*IHLLNLCLPGYSHLSIHF 458 +QS S F A LS G S+ L EEA H S*+*IHLLNLCLPGY HLSIHF Sbjct: 1675 SQSSSCFPAVLSLGSSSLLKTLFDLSLFLRREEAYLHLS*L*IHLLNLCLPGYPHLSIHF 1496 Query: 457 VVRCLQEVFIDPTSFVDAPECMSGYFDSNVSVMNIAEKTFLLNVWLPVSP 308 VVRCLQEVF+ PTSFV+AP+ M GY D NV V+NIA+KT LLN+WLP SP Sbjct: 1495 VVRCLQEVFVYPTSFVNAPKSMGGYLDPNVPVVNIAKKTLLLNIWLPCSP 1346 Score = 96.4 bits (204), Expect = 3e-19 Identities = 45/60 (75%), Positives = 47/60 (78%) Frame = +3 / +3 Query: 306 QGETGSQTFRRNVFSAIFMTDTLESK*PLMHSGASTKLVGSMNTS*RHLTTKWILRWE*P 485 QGE GSQ FRR+VF AIF T TL S+*P M GA TKLVG NTS*RHLTTKWILRW *P Sbjct: 1344 QGEHGSQMFRRSVFLAIFTTGTLGSR*PPMLFGALTKLVG*TNTS*RHLTTKWILRWG*P 1523
>LOC_Os11g01520:12011.t00051:unspliced-genomic hypothetical protein| Length = 360 Score = 37.7 bits (76), Expect = 0.13 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +1 / -3 Query: 214 QGRHGPGQARHLRRPPHP 267 QGRHG G+ RH RRP HP Sbjct: 187 QGRHGRGRGRHRRRPRHP 134
>LOC_Os09g39550:12009.t03420:unspliced-genomic expressed protein| Length = 2342 Score = 35.4 bits (71), Expect = 0.65 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 / +2 Query: 727 DIRHLFICIHDFRCFVIISFSCF 659 +I H FIC H F FV + +SCF Sbjct: 1625 EIMHSFICCHTFIKFVFVGYSCF 1693
>LOC_Os01g32400:12001.t02817:unspliced-genomic transposon protein, putative, unclassified| Length = 1993 Score = 35.4 bits (71), Expect = 0.65 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = -2 / -2 Query: 246 MPRLARPMTTLLFGSMLFTVSITSAGSFPSPPTRRTT 136 M RLA P T LF L+ V T+ +FP PP R +T Sbjct: 1488 MLRLAPPSTCTLFILTLWMVGETTRANFPPPPPRAST 1378
>LOC_Os10g07280:12010.t00587:unspliced-genomic conserved hypothetical protein| Length = 300 Score = 30.4 bits (60), Expect(2) = 0.77 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 / -3 Query: 220 RHGPGQARHLRRPPHP 267 R P +AR LRRPPHP Sbjct: 112 RQPPHRARFLRRPPHP 65 Score = 23.5 bits (45), Expect(2) = 0.77 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 / -2 Query: 6 PHQSPPPRTGKPRRQP 53 P +SPP PRRQP Sbjct: 203 PPRSPPLPPRSPRRQP 156
>LOC_Os02g54100:12002.t04989:unspliced-genomic expressed protein| Length = 4313 Score = 34.5 bits (69), Expect = 1.2 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 / +2 Query: 596 PIEPPRDPALS*PLPRDGRSQLPSQLDLNTSSQSLPSRLFPSQYPFCC 453 P PP P P G + LP+ L TS + PSR + P CC Sbjct: 3041 PTSPPPPPPPPSPASGQGAAPLPAARQLPTSRELRPSRGCSRRTPRCC 3184
>LOC_Os04g27480:12004.t02451:unspliced-genomic terpene synthase 7, putative| Length = 1406 Score = 34.1 bits (68), Expect = 1.7 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = -3 / -2 Query: 596 PIEPPRDPALS*PLPRDGRSQLPSQLDLNTSSQSLPSRLFPSQYPFCCKVSSGGIHRSHQ 417 P+ P +LS PLPR R+Q + + + PS LFP++ + G H+ Sbjct: 241 PLPPRLSLSLSLPLPRSARAQRTRAREPRRAERPPPSLLFPAERQLAPLTAQGRFPNRHR 62
>LOC_Os01g74550:12001.t06733:unspliced-genomic transposon protein, putative, unclassified| Length = 3561 Score = 27.6 bits (54), Expect(2) = 1.7 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = -3 / +1 Query: 596 PIEPPRDPALS*PLPRDGRSQLPSQLDLNTSSQSLPSRLFPSQYPFCCKVSSG 438 P PP ALS P S+ PS +S S P PS P +SG Sbjct: 625 PSSPPSSSALSTPPSTTPPSRPPSSSPSPPASTSAPPPPIPSATPTTPTTASG 783 Score = 23.5 bits (45), Expect(2) = 1.7 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -3 / +2 Query: 725 HQTPLHLYPR 696 H+ PLHL+PR Sbjct: 614 HRPPLHLHPR 643
>LOC_Os11g43640:12011.t03894:unspliced-genomic extensin-like protein, putative| Length = 2882 Score = 33.6 bits (67), Expect = 2.3 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -3 / -3 Query: 53 RLPARFSRAWWGRLV 9 RLP+R+SR WWGR V Sbjct: 1758 RLPSRWSRLWWGRCV 1714
>LOC_Os08g28190:12008.t02576:unspliced-genomic actin-like protein 2, putative, expressed| Length = 4687 Score = 33.6 bits (67), Expect = 2.3 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -2 / +3 Query: 300 LPPSSETLLPNWMWRPAKMP 241 LPPSS +L+P+ WRP +P Sbjct: 54 LPPSSRSLIPDPAWRPPSLP 113
>LOC_Os09g33650:12009.t02941:unspliced-genomic expressed protein| Length = 850 Score = 28.1 bits (55), Expect(2) = 2.5 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 / +3 Query: 214 QGRHGPGQARHLRRPP 261 QG+H GQA H R PP Sbjct: 57 QGQHSQGQAPHRRLPP 104 Score = 22.6 bits (43), Expect(2) = 2.5 Identities = 10/37 (27%), Positives = 19/37 (51%) Frame = +2 / +1 Query: 263 IQFGNKVSEDGGNKSRRNWKPNVQEKRLFSYIHDRHI 373 + + +K GNK+ K V ++ + + HDRH+ Sbjct: 178 VDYYHKNKNHDGNKALVMRKVVVHDEMVIADDHDRHL 288
>LOC_Os04g18510:12004.t01593:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 402 Score = 29.5 bits (58), Expect(2) = 2.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -2 / -3 Query: 297 PPSSETLLPNWMWRPAKMPRLARPM 223 PPS LP +W P PR A P+ Sbjct: 169 PPSPSVGLPPLLWSPVSSPRRALPV 95 Score = 23.1 bits (44), Expect(2) = 2.5 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = -3 / -2 Query: 638 NPKPFLIRCGTLFWPIEPPRDPAL 567 +P P ++R EPP P+L Sbjct: 386 SPSPLVVRSALAPCSFEPPSSPSL 315
>LOC_Os05g11890:12005.t01019:unspliced-genomic conserved hypothetical protein| Length = 417 Score = 29.0 bits (57), Expect(2) = 2.6 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -2 / -2 Query: 297 PPSSETLLPNWMWRPAKMPRLA 232 PPSS LP +W P PR A Sbjct: 167 PPSSSVGLPPLLWSPVSSPRRA 102 Score = 23.5 bits (45), Expect(2) = 2.6 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -3 / -2 Query: 638 NPKPFLIRCGTLFWPIEPPRDPAL 567 +P P ++R +EPP P+L Sbjct: 401 SPSPLVVRSALAPCALEPPSPPSL 330
>LOC_Os12g35060:12012.t03194:unspliced-genomic expressed protein| Length = 6909 Score = 30.9 bits (61), Expect(2) = 3.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 / +1 Query: 739 RFLCDIRHLFICIHDFRCFVIISFSCF*LTLL 644 RF +H +CIH F C +S CF*++ L Sbjct: 2041 RFFYCCQHCPVCIHLFGCDSSVSLICF*VSCL 2136 Score = 25.4 bits (49), Expect(2) = 3.0 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -3 / +1 Query: 482 LFPSQYPFCCKVSSGGI 432 +F Q+PFCC + S G+ Sbjct: 4867 IFLIQFPFCCCM*SNGV 4917
>LOC_Os09g28410:12009.t02519:unspliced-genomic hypothetical protein| Length = 1697 Score = 33.1 bits (66), Expect = 3.2 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 / -1 Query: 591 RTSSRPCSILASSSGWKKPTSIPARSEYIFSIF 493 RTSS P S+ S+SGW S A S S+F Sbjct: 140 RTSSSPLSLSQSTSGWSMSVSARAASSLGLSVF 42
>LOC_Os02g25600:12002.t02255:unspliced-genomic hypothetical protein| Length = 1489 Score = 32.7 bits (65), Expect = 4.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 / -3 Query: 638 NPKPFLIRCGTLFWPIEPPRDPALS 564 +P+ FL RC L P+ PPR P L+ Sbjct: 119 SPQEFLTRCHLLHCPLLPPRSPPLN 45
>LOC_Os10g05050:12010.t00384:unspliced-genomic conserved hypothetical protein| Length = 875 Score = 32.7 bits (65), Expect = 4.4 Identities = 15/54 (27%), Positives = 28/54 (51%) Frame = +2 / -3 Query: 152 GGEGKLPAEVMDTVKSILPNSKVVMGRAKRGIFAGRHIQFGNKVSEDGGNKSRR 313 GGE + + D + + ++ VV +R + AG+H++ +V DGG + R Sbjct: 273 GGEATVLEVLYDVSEPLGGDAAVVGEEVERLLEAGQHVEVSGEVIGDGGGREER 112
>LOC_Os03g38510:12003.t03293:unspliced-genomic hypothetical protein| Length = 884 Score = 32.7 bits (65), Expect = 4.4 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 / -2 Query: 214 QGRHGPGQARHLRRPPHP 267 +GRHG G+ R RRP HP Sbjct: 154 RGRHGRGRGRRRRRPQHP 101
>LOC_Os01g20860:12001.t01823:unspliced-genomic phospholipase D. Active site motif family protein, expressed| Length = 11419 Score = 32.7 bits (65), Expect = 4.4 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +2 / -1 Query: 485 WKAKIEKMYSDLAGMEVGFFHPEEEAKIEQGLEEVRSA 598 W K+ ++ + + V FFH EE ++QG+ +++SA Sbjct: 2869 WVNKVLMLWKTVTRL*VFFFHLREEHAVDQGIPQMQSA 2756
>LOC_Os05g19380:12005.t01704:unspliced-genomic expressed protein| Length = 3084 Score = 32.2 bits (64), Expect = 6.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 / -1 Query: 608 TLFWPIEPPRDPALS*PLPRDGRSQLP 528 T F P+E P D L PLP DG+ ++P Sbjct: 1548 TRFHPVEYPGDIVLHTPLPTDGQHRVP 1468
>LOC_Os12g23930:12012.t02123:unspliced-genomic protein kinase domain containing protein, expressed| Length = 1466 Score = 32.2 bits (64), Expect = 6.0 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -2 / -2 Query: 273 PNWMWRPAKMPRLARPMTTLLFGSMLFTVSITSAGSFPSPPTRR 142 P+W R + R AR +M T S T+A P+PP RR Sbjct: 187 PSWTRRRRRSSRTARTAAPCKSAAMTATRSATAAPPPPAPPLRR 56
>LOC_Os08g10100:12008.t00895:unspliced-genomic expressed protein| Length = 921 Score = 32.2 bits (64), Expect = 6.0 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +1 Query: 591 RTSSRPCSILASSSGWKKPTSIPARS 514 RT SRP S A+S W++PT AR+ Sbjct: 25 RTLSRPASTAATSRTWRRPTGGTART 102
>LOC_Os03g15470:12003.t01333:unspliced-genomic hypothetical protein| Length = 696 Score = 32.2 bits (64), Expect = 6.0 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 / -3 Query: 214 QGRHGPGQARHLRRPPHP 267 +GRHG G+ R RRP HP Sbjct: 184 RGRHGHGRGRRQRRPRHP 131
>LOC_Os01g54850:12001.t04899:unspliced-genomic F-box domain containing protein, expressed| Length = 2398 Score = 32.2 bits (64), Expect = 6.0 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -1 / -3 Query: 799 PEKEATEPHLPLIMAPRSKLRFLCDIRHLFICIHDFRC 686 PE+EA +P + P +L+F + +C+ DFRC Sbjct: 929 PEREAGQPRASIQERPYPELQFDARPGDVQVCLPDFRC 816
>LOC_Os11g39820:12011.t03524:unspliced-genomic hypothetical protein| Length = 1582 Score = 29.9 bits (59), Expect(2) = 6.7 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 / -3 Query: 599 WPIEPPRDPALS*PLPRDGR 540 W + PP P+LS LPR GR Sbjct: 1568 WELPPPPPPSLSLALPRGGR 1509 Score = 23.1 bits (44), Expect(2) = 6.7 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = -2 / -2 Query: 306 DLLPPSSETLLPNWMWRPAKMPRLARPMTTL 214 +L+P S P W P PR A ++ L Sbjct: 597 ELIPTPSPLSFPPWASPPFPSPRPAHSLSPL 505
>LOC_Os03g51330:12003.t04463:unspliced-genomic DELLA protein SLR1, putative, expressed| Length = 2547 Score = 31.8 bits (63), Expect = 8.2 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = -3 / -2 Query: 545 GRSQLPSQLDLNTSSQSLPSRLFPSQYPFCCKVSSGGIHRSHQLCRCTG 399 G S L + L TSS P R + SSG +S L CTG Sbjct: 1580 GLSDLARRSTLLTSSSESPRRWYSCSMKLTATASSGSTKKSDLLSSCTG 1434
>LOC_Os11g23190:12011.t01988:unspliced-genomic hypothetical protein| Length = 2472 Score = 31.8 bits (63), Expect = 8.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 812 PFVELYFIHEIANC*ILKTLLAY 880 PFV L+F+ + C* LKT L Y Sbjct: 522 PFVNLHFMFALVTC*TLKTALTY 590
>LOC_Os10g40890:12010.t03329:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5186 Score = 31.8 bits (63), Expect = 8.3 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -2 / -2 Query: 285 ETLLPNWMWRPAKMPRLARPMTTLLFGSMLFTVSITSAGSFPSP 154 E W+ P +P L P L G FTV T+A PSP Sbjct: 655 EHTFAGWLTNPCSIPALTLPSGLDLAGLRNFTVDSTTAFHQPSP 524
>LOC_Os07g30930:12007.t02780:unspliced-genomic EMB2745, putative, expressed| Length = 2787 Score = 31.8 bits (63), Expect = 8.3 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 / -3 Query: 785 SFFFRNNHHPFVELYFIHEIANC 853 S + R+ HHPF ++ IH+ A+C Sbjct: 1486 SVYTRHMHHPFFLIWLIHQSAHC 1418
>LOC_Os06g45500:12006.t04238:unspliced-genomic copper-transporting ATPase RAN1, putative, expressed| Length = 6504 Score = 31.8 bits (63), Expect = 8.3 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -1 / +3 Query: 763 IMAPRSKLRFLCDIRHLFICIHDFRCFVIISFSCF*LTL 647 + +P S++ LC+ +F + F CFV F C TL Sbjct: 3663 VQSPHSEIC*LCE*PPIFFSVMSFICFVCTYFKCLPCTL 3779
>LOC_Os06g07250:12006.t00608:unspliced-genomic protein GOS9, putative, expressed| Length = 5169 Score = 31.8 bits (63), Expect = 8.3 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = -1 / +1 Query: 778 PHLPLIMAPRSKLRFLCDIRHLFICIHDFRCFVIISFSC 662 P P M P + ++ H++ICIH + C + + C Sbjct: 2698 PWCPGTMVPHMSVLYIYICIHIYICIHIYICVYMCIYMC 2814
>LOC_Os03g56140:12003.t04874:unspliced-genomic homeobox protein rough sheath 1, putative, expressed| Length = 5082 Score = 31.8 bits (63), Expect = 8.3 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -1 / +2 Query: 724 IRHLFICIHDFRCFVIISFSCF*LTLLC 641 +RH F+C+H + C ++SF L+C Sbjct: 2315 MRHFFLCLHIYSCLQMVSFEN*IFFLIC 2398
>LOC_Os03g17030:12003.t01484:unspliced-genomic polyadenylate-binding protein 2, putative, expressed| Length = 4373 Score = 31.8 bits (63), Expect = 8.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 / -2 Query: 302 KSRRNWKPNVQEKRLFSYIHDRHIR 376 K R WKPNVQ+K ++ RH R Sbjct: 106 KRRGIWKPNVQKKNAIAFWDTRHCR 32
>LOC_Os02g33944:12002.t03035:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed| Length = 8091 Score = 31.8 bits (63), Expect = 8.3 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 / -3 Query: 895 SHLSPICQQSLQYLTVSYFVDKV 827 SHL P+C + L + VS+F+D V Sbjct: 5428 SHLEPLCHEVLYKIVVSHFLDMV 5360
>LOC_Os01g28730:12001.t02566:unspliced-genomic RKF3, putative, expressed| Length = 2050 Score = 27.2 bits (53), Expect(2) = 8.4 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -2 / +1 Query: 297 PPSSETLLPNWMWRPAKMPRLARPM 223 PP+++ + P+ W+PA+ P R M Sbjct: 1255 PPANDCV*PDAQWQPARSPVRCRGM 1329 Score = 25.8 bits (50), Expect(2) = 8.4 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 / +3 Query: 591 RTSSRPCSILASSSGWKKPTSIPARS 514 R +S PCS ASSS P P+ S Sbjct: 297 RAASSPCSPFASSSRSTSPPQDPSSS 374 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 350,009,165 Number of extensions: 5296474 Number of successful extensions: 27037 Number of sequences better than 10.0: 35 Length of query: 336 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 286 Effective length of database: 52,799,986 Effective search space: 15100795996 Effective search space used: 15100795996 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)