ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf120e24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001066447.1| Oryza sativa (japonica cultivar-group) Os07g... 579 e-162
2dbj|AK070349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 579 e-162
3gb|BT017773.1| Zea mays clone EL01N0502G03.c mRNA sequence 438 e-119
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 333 7e-88
5dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic D... 333 7e-88
6dbj|AB108232.1| Phleum pratense DNA, SSR, microsatellite A11-G09 307 4e-80
7gb|AY112154.1| Zea mays CL18725_-2 mRNA sequence 98 7e-17
8ref|NM_119295.2| Arabidopsis thaliana structural constituent of ... 56 3e-04
9gb|BT006351.1| Arabidopsis thaliana At4g31460/F3L17_30 gene, com... 56 3e-04
10gb|AF412057.1|AF412057 Arabidopsis thaliana AT4g31460/F3L17_30 m... 56 3e-04
11gb|AY087804.1| Arabidopsis thaliana clone 38533 mRNA, complete s... 56 3e-04
12emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 56 3e-04
13emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BA... 56 3e-04
14emb|BX828035.1|CNS0A4CS Arabidopsis thaliana Full-length cDNA Co... 56 3e-04
15emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 ... 46 0.24
16emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in... 44 0.96
17ref|XM_001022586.1| Tetrahymena thermophila SB210 hypothetical p... 42 3.8
18dbj|AK241099.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 42 3.8
19emb|CR388207.13| Zebrafish DNA sequence from clone CH211-28E16 i... 42 3.8
20emb|AM236085.1| Rhizobium leguminosarum bv. viciae plasmid pRL11... 42 3.8
21gb|AC136472.40| Medicago truncatula clone mth2-24f21, complete s... 42 3.8
22emb|CR759797.14| Zebrafish DNA sequence from clone DKEY-87K14 in... 42 3.8
23gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome... 42 3.8
24emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in ... 42 3.8
25emb|BX936425.7| Zebrafish DNA sequence from clone CH211-39L24 in... 42 3.8
26gb|AC104212.3| Homo sapiens chromosome 8, clone RP11-941H19, com... 42 3.8
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
28dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
29emb|AL590084.9| Human DNA sequence from clone RP11-191A15 on chr... 42 3.8
30emb|AL445251.4| Human DNA sequence from clone RP11-704L16 on chr... 42 3.8
31emb|BX957240.10| Zebrafish DNA sequence from clone DKEY-39A4 in ... 42 3.8
32emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete se... 42 3.8
33gb|AY232580.1| Donacia clavareaui isolate N65 16S ribosomal RNA ... 42 3.8
34dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
35dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
36emb|CR354426.9| Zebrafish DNA sequence from clone DKEY-48G21 in ... 42 3.8
37dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic D... 42 3.8
38emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 i... 42 3.8
39emb|BX004874.11| Zebrafish DNA sequence from clone CH211-39E15 i... 42 3.8
40gb|AC151311.2| Xenopus tropicalis clone ISB-158O8, complete sequ... 42 3.8
41emb|AL844579.10| Mouse DNA sequence from clone RP23-219M22 on ch... 42 3.8
42gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, co... 42 3.8
43gb|AC102550.9| Mus musculus chromosome 18, clone RP23-153A8, com... 42 3.8
44gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 42 3.8
45emb|Z93715.1|MTAT93715 A.tabida 16S rRNA gene, partial 42 3.8 
>ref|NM_001066447.1| Oryza sativa (japonica cultivar-group) Os07g0544900 (Os07g0544900)
           mRNA, complete cds
          Length = 1121
 Score =  579 bits (292), Expect = e-162
 Identities = 478/540 (88%)
 Strand = Plus / Plus

                                                                       
Query: 96  agagtaagatgtcgttccgggcgcgggagatttacaagaaggtggtgcgccgcgtgggcg 155
           |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 124 agaggaagatgtcgttccgtgcgcgggagatgtacaagaaggtggtgcggcgcgtgggcg 183

                                                                       
Query: 156 gggaggggaagctgccggcggaggtgatggacacggtgaagagcatactcccgaatagca 215
           | ||||||||||||||||||||| ||||||   ||||||||| | | || ||  | ||||
Sbjct: 184 gcgaggggaagctgccggcggagctgatggcgtcggtgaagaacttgctgcctgacagca 243

                                                                       
Query: 216 aggtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagttcggca 275
           |||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 244 aggtcgtcatggggagggccaagcgcggcatctacgccggacgccacatccagttcggca 303

                                                                       
Query: 276 acaaggtctccgaggacggcggcaacaagtcaaggcgaaactggaagccaaacgttcagg 335
           ||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||
Sbjct: 304 acaaggtctccgaggacggtggcaacaagtcaaggcgaacatggaagccaaatgttcagg 363

                                                                       
Query: 336 agaaacgtcttttcagctatattcatgaccgacacattagagtcaaagtaaccactcatg 395
           |||| |||||||| ||||||||||| ||||| |||||||| ||||| |||||||| ||||
Sbjct: 364 agaagcgtctttttagctatattcacgaccggcacattagggtcaaggtaaccacccatg 423

                                                                       
Query: 396 cactccggtgcatcgacaaagctggtgggatcgatgaatacctcctgaagacaccttaca 455
           | || |||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 424 ctcttcggtgcattgacaaagctggtgggatagacgaatacctcctgaagacaccttaca 483

                                                                       
Query: 456 acaaaatggatactgagatgggaatagcctggaaggcaaagattgagaagatgtattcag 515
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| 
Sbjct: 484 acaaaatggatactgagatgggggtagcctggaaggcaaagattgagaagatgtattcac 543

                                                                       
Query: 516 atctagctgggatggaagttggcttcttccatcccgaggaagaggctaagatagagcagg 575
           | ||||||   ||||| || |||||||||  ||| ||||||||| ||||||| || ||||
Sbjct: 544 agctagctcaaatggaggtaggcttcttctctcctgaggaagagactaagatcgaacagg 603

                                                                       
Query: 576 gtctcgaggaggttcgatcggccaaaagagagttccgcagcgaatcaagaagggctttgg 635
           || | ||||||| |||| | ||||| ||||||  |||||| ||| ||||||| |||||||
Sbjct: 604 gttttgaggaggctcgagctgccaagagagagcaccgcagggaagcaagaagagctttgg 663
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>dbj|AK070349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G11, full
           insert sequence
          Length = 1122

 Score =  579 bits (292), Expect = e-162
 Identities = 478/540 (88%)
 Strand = Plus / Plus

                                                                       
Query: 96  agagtaagatgtcgttccgggcgcgggagatttacaagaaggtggtgcgccgcgtgggcg 155
           |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 126 agaggaagatgtcgttccgtgcgcgggagatgtacaagaaggtggtgcggcgcgtgggcg 185

                                                                       
Query: 156 gggaggggaagctgccggcggaggtgatggacacggtgaagagcatactcccgaatagca 215
           | ||||||||||||||||||||| ||||||   ||||||||| | | || ||  | ||||
Sbjct: 186 gcgaggggaagctgccggcggagctgatggcgtcggtgaagaacttgctgcctgacagca 245

                                                                       
Query: 216 aggtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagttcggca 275
           |||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 246 aggtcgtcatggggagggccaagcgcggcatctacgccggacgccacatccagttcggca 305

                                                                       
Query: 276 acaaggtctccgaggacggcggcaacaagtcaaggcgaaactggaagccaaacgttcagg 335
           ||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||
Sbjct: 306 acaaggtctccgaggacggtggcaacaagtcaaggcgaacatggaagccaaatgttcagg 365

                                                                       
Query: 336 agaaacgtcttttcagctatattcatgaccgacacattagagtcaaagtaaccactcatg 395
           |||| |||||||| ||||||||||| ||||| |||||||| ||||| |||||||| ||||
Sbjct: 366 agaagcgtctttttagctatattcacgaccggcacattagggtcaaggtaaccacccatg 425

                                                                       
Query: 396 cactccggtgcatcgacaaagctggtgggatcgatgaatacctcctgaagacaccttaca 455
           | || |||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 426 ctcttcggtgcattgacaaagctggtgggatagacgaatacctcctgaagacaccttaca 485

                                                                       
Query: 456 acaaaatggatactgagatgggaatagcctggaaggcaaagattgagaagatgtattcag 515
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| 
Sbjct: 486 acaaaatggatactgagatgggggtagcctggaaggcaaagattgagaagatgtattcac 545

                                                                       
Query: 516 atctagctgggatggaagttggcttcttccatcccgaggaagaggctaagatagagcagg 575
           | ||||||   ||||| || |||||||||  ||| ||||||||| ||||||| || ||||
Sbjct: 546 agctagctcaaatggaggtaggcttcttctctcctgaggaagagactaagatcgaacagg 605

                                                                       
Query: 576 gtctcgaggaggttcgatcggccaaaagagagttccgcagcgaatcaagaagggctttgg 635
           || | ||||||| |||| | ||||| ||||||  |||||| ||| ||||||| |||||||
Sbjct: 606 gttttgaggaggctcgagctgccaagagagagcaccgcagggaagcaagaagagctttgg 665
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>gb|BT017773.1| Zea mays clone EL01N0502G03.c mRNA sequence
          Length = 1132

 Score =  438 bits (221), Expect = e-119
 Identities = 407/469 (86%)
 Strand = Plus / Plus

                                                                       
Query: 99  gtaagatgtcgttccgggcgcgggagatttacaagaaggtggtgcgccgcgtgggcgggg 158
           |||||||||||||||| ||||||||||| |||||||||||||| || ||| |||| || |
Sbjct: 64  gtaagatgtcgttccgcgcgcgggagatgtacaagaaggtggtacggcgcttgggtggcg 123

                                                                       
Query: 159 aggggaagctgccggcggaggtgatggacacggtgaagagcatactcccgaatagcaagg 218
           |||||||||||||||| ||| ||||| |  ||||||||  |||||| ||| | ||||| |
Sbjct: 124 aggggaagctgccggctgagctgatgaagtcggtgaaggacatactgccggacagcaacg 183

                                                                       
Query: 219 tcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagttcggcaaca 278
           |||||||||| ||||||||||||||||||||||| || || ||||||| |||||| ||||
Sbjct: 184 tcgtcatggggcgggccaagcgcggcatcttcgcggggcgacacatccggttcgggaaca 243

                                                                       
Query: 279 aggtctccgaggacggcggcaacaagtcaaggcgaaactggaagccaaacgttcaggaga 338
           ||||||||||||||||||||||||| |||||||||   ||||||||||| ||||||||||
Sbjct: 244 aggtctccgaggacggcggcaacaaatcaaggcgatcatggaagccaaatgttcaggaga 303

                                                                       
Query: 339 aacgtcttttcagctatattcatgaccgacacattagagtcaaagtaaccactcatgcac 398
           | ||||||||||||||| ||||||| |  |||||||| ||||| || ||||| |||||||
Sbjct: 304 agcgtcttttcagctatgttcatgatcagcacattagcgtcaaggttaccacacatgcac 363

                                                                       
Query: 399 tccggtgcatcgacaaagctggtgggatcgatgaatacctcctgaagacaccttacaaca 458
           | || || || ||||||||||||||||| ||||||||||||||||||||||||||| | |
Sbjct: 364 ttcgatgtattgacaaagctggtgggatagatgaatacctcctgaagacaccttacgata 423

                                                                       
Query: 459 aaatggatactgagatgggaatagcctggaaggcaaagattgagaagatgtattcagatc 518
           |||||||||| |||||||| ||||  ||||| ||||| ||||| ||| ||||||||||| 
Sbjct: 424 aaatggataccgagatggggatagtgtggaaagcaaatattgaaaagctgtattcagatt 483

                                                            
Query: 519 tagctgggatggaagttggcttcttccatcccgaggaagaggctaagat 567
           | ||||  || ||||| |||||||||| ||||||||  |||||||||||
Sbjct: 484 tggctgaaatagaagtaggcttcttccctcccgaggttgaggctaagat 532



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 637 tttgacaaagcagagtcagctagaagcaactaaagctgatgatgacgaaacacctgaagt 696
           |||| ||||||| || ||||||||||||| ||  | || ||||||| ||||   ||||||
Sbjct: 596 tttggcaaagcaaagccagctagaagcaagtagtgttggtgatgaccaaacgagtgaagt 655

                                      
Query: 697 cgtggatacaaatgaagaggtgtctga 723
           | | |||||||| |||||||| |||||
Sbjct: 656 catagatacaaaggaagaggtatctga 682
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  333 bits (168), Expect = 7e-88
 Identities = 291/332 (87%)
 Strand = Plus / Minus

                                                                            
Query: 304      gtcaaggcgaaactggaagccaaacgttcaggagaaacgtcttttcagctatattcatga 363
                |||||||||||  ||||||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 21524412 gtcaaggcgaacatggaagccaaatgttcaggagaagcgtctttttagctatattcacga 21524353

                                                                            
Query: 364      ccgacacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgg 423
                ||| |||||||| ||||| |||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 21524352 ccggcacattagggtcaaggtaaccacccatgctcttcggtgcattgacaaagctggtgg 21524293

                                                                            
Query: 424      gatcgatgaatacctcctgaagacaccttacaacaaaatggatactgagatgggaatagc 483
                ||| || |||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 21524292 gatagacgaatacctcctgaagacaccttacaacaaaatggatactgagatgggggtagc 21524233

                                                                            
Query: 484      ctggaaggcaaagattgagaagatgtattcagatctagctgggatggaagttggcttctt 543
                ||||||||||||||||||||||||||||||| | ||||||   ||||| || ||||||||
Sbjct: 21524232 ctggaaggcaaagattgagaagatgtattcacagctagctcaaatggaggtaggcttctt 21524173

                                                                            
Query: 544      ccatcccgaggaagaggctaagatagagcagggtctcgaggaggttcgatcggccaaaag 603
                |  ||| ||||||||| ||||||| || |||||| | ||||||| |||| | ||||| ||
Sbjct: 21524172 ctctcctgaggaagagactaagatcgaacagggttttgaggaggctcgagctgccaagag 21524113

                                                
Query: 604      agagttccgcagcgaatcaagaagggctttgg 635
                ||||  |||||| ||| ||||||| |||||||
Sbjct: 21524112 agagcaccgcagggaagcaagaagagctttgg 21524081



 Score =  250 bits (126), Expect = 8e-63
 Identities = 189/210 (90%)
 Strand = Plus / Minus

                                                                            
Query: 96       agagtaagatgtcgttccgggcgcgggagatttacaagaaggtggtgcgccgcgtgggcg 155
                |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 21525628 agaggaagatgtcgttccgtgcgcgggagatgtacaagaaggtggtgcggcgcgtgggcg 21525569

                                                                            
Query: 156      gggaggggaagctgccggcggaggtgatggacacggtgaagagcatactcccgaatagca 215
                | ||||||||||||||||||||| ||||||   ||||||||| | | || ||  | ||||
Sbjct: 21525568 gcgaggggaagctgccggcggagctgatggcgtcggtgaagaacttgctgcctgacagca 21525509

                                                                            
Query: 216      aggtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagttcggca 275
                |||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 21525508 aggtcgtcatggggagggccaagcgcggcatctacgccggacgccacatccagttcggca 21525449

                                              
Query: 276      acaaggtctccgaggacggcggcaacaagt 305
                ||||||||||||||||||| ||||||||||
Sbjct: 21525448 acaaggtctccgaggacggtggcaacaagt 21525419
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>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1582_D10
          Length = 103475

 Score =  333 bits (168), Expect = 7e-88
 Identities = 291/332 (87%)
 Strand = Plus / Minus

                                                                         
Query: 304   gtcaaggcgaaactggaagccaaacgttcaggagaaacgtcttttcagctatattcatga 363
             |||||||||||  ||||||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 62196 gtcaaggcgaacatggaagccaaatgttcaggagaagcgtctttttagctatattcacga 62137

                                                                         
Query: 364   ccgacacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgg 423
             ||| |||||||| ||||| |||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 62136 ccggcacattagggtcaaggtaaccacccatgctcttcggtgcattgacaaagctggtgg 62077

                                                                         
Query: 424   gatcgatgaatacctcctgaagacaccttacaacaaaatggatactgagatgggaatagc 483
             ||| || |||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 62076 gatagacgaatacctcctgaagacaccttacaacaaaatggatactgagatgggggtagc 62017

                                                                         
Query: 484   ctggaaggcaaagattgagaagatgtattcagatctagctgggatggaagttggcttctt 543
             ||||||||||||||||||||||||||||||| | ||||||   ||||| || ||||||||
Sbjct: 62016 ctggaaggcaaagattgagaagatgtattcacagctagctcaaatggaggtaggcttctt 61957

                                                                         
Query: 544   ccatcccgaggaagaggctaagatagagcagggtctcgaggaggttcgatcggccaaaag 603
             |  ||| ||||||||| ||||||| || |||||| | ||||||| |||| | ||||| ||
Sbjct: 61956 ctctcctgaggaagagactaagatcgaacagggttttgaggaggctcgagctgccaagag 61897

                                             
Query: 604   agagttccgcagcgaatcaagaagggctttgg 635
             ||||  |||||| ||| ||||||| |||||||
Sbjct: 61896 agagcaccgcagggaagcaagaagagctttgg 61865



 Score =  250 bits (126), Expect = 8e-63
 Identities = 189/210 (90%)
 Strand = Plus / Minus

                                                                         
Query: 96    agagtaagatgtcgttccgggcgcgggagatttacaagaaggtggtgcgccgcgtgggcg 155
             |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 63412 agaggaagatgtcgttccgtgcgcgggagatgtacaagaaggtggtgcggcgcgtgggcg 63353

                                                                         
Query: 156   gggaggggaagctgccggcggaggtgatggacacggtgaagagcatactcccgaatagca 215
             | ||||||||||||||||||||| ||||||   ||||||||| | | || ||  | ||||
Sbjct: 63352 gcgaggggaagctgccggcggagctgatggcgtcggtgaagaacttgctgcctgacagca 63293

                                                                         
Query: 216   aggtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagttcggca 275
             |||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 63292 aggtcgtcatggggagggccaagcgcggcatctacgccggacgccacatccagttcggca 63233

                                           
Query: 276   acaaggtctccgaggacggcggcaacaagt 305
             ||||||||||||||||||| ||||||||||
Sbjct: 63232 acaaggtctccgaggacggtggcaacaagt 63203
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>dbj|AB108232.1| Phleum pratense DNA, SSR, microsatellite A11-G09
          Length = 464

 Score =  307 bits (155), Expect = 4e-80
 Identities = 197/211 (93%)
 Strand = Plus / Minus

                                                                       
Query: 306 caaggcgaaactggaagccaaacgttcaggagaaacgtcttttcagctatattcatgacc 365
           ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| || |
Sbjct: 267 caaggagaaactggaagccaaatgttcaggagaaacgacttttcagctatattcacgagc 208

                                                                       
Query: 366 gacacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtggga 425
           | |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 207 ggcacattcgactcaaagtaaccactcatgcactccggtgcattgacaaagctggtggga 148

                                                                       
Query: 426 tcgatgaatacctcctgaagacaccttacaacaaaatggatactgagatgggaatagcct 485
           | ||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 147 ttgatgaatacctcctgaagacaccttacaacaaaattgataccgagatgggtattgcct 88

                                          
Query: 486 ggaaggcaaagattgagaagatgtattcaga 516
           |||||||||||||||||||||||||||||||
Sbjct: 87  ggaaggcaaagattgagaagatgtattcaga 57



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 551 gaggaagaggctaagatagagcagggtctcgaggaggttcgatcgg 596
           |||||||||||| || || | || ||| ||||||||||||||||||
Sbjct: 46  gaggaagaggctgagttaaaacatggtttcgaggaggttcgatcgg 1
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>gb|AY112154.1| Zea mays CL18725_-2 mRNA sequence
          Length = 661

 Score = 97.6 bits (49), Expect = 7e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 443 aagacaccttacaacaaaatggatactgagatgggaatagcctggaaggcaaagattgag 502
           ||||| |||||||| ||||||||||| |||||||| ||||  ||||| ||||| || || 
Sbjct: 647 aagaccccttacaataaaatggataccgagatggggatagtgtggaaagcaaatatcgaa 588

                                                                       
Query: 503 aagatgtattcagatctagctgggatggaagttggcttcttccatcccgaggaagaggct 562
           ||||||||||||||| | ||||  || ||||| |||||||||| ||||||||  ||||||
Sbjct: 587 aagatgtattcagatttggctgaaatagaagtaggcttcttccctcccgaggttgaggct 528

                
Query: 563 aagat 567
           |||||
Sbjct: 527 aagat 523
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>ref|NM_119295.2| Arabidopsis thaliana structural constituent of ribosome (AT4G31460)
           mRNA, complete cds
          Length = 1105

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 218 gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
           |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 274 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 325



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 368 cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
           ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 424 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 483

                                                             
Query: 428 gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
           || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 484 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 533
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>gb|BT006351.1| Arabidopsis thaliana At4g31460/F3L17_30 gene, complete cds
          Length = 639

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 218 gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
           |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 112 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 163



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 368 cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
           ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 262 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 321

                                                             
Query: 428 gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
           || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 322 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 371
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>gb|AF412057.1|AF412057 Arabidopsis thaliana AT4g31460/F3L17_30 mRNA, complete cds
          Length = 968

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 218 gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
           |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 136 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 187



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 368 cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
           ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 286 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 345

                                                             
Query: 428 gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
           || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 346 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 395
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>gb|AY087804.1| Arabidopsis thaliana clone 38533 mRNA, complete sequence
          Length = 1006

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 218 gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
           |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 274 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 325



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 368 cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
           ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 424 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 483

                                                             
Query: 428 gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
           || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 484 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 533
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 218   gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
             |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 26680 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 26629



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 368   cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
             ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 26094 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 26035

                                                               
Query: 428   gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
             || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 26034 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 25985
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>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project)
          Length = 94319

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 218   gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
             |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 38615 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 38564



 Score = 44.1 bits (22), Expect = 0.96
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 368   cacattagagtcaaagtaaccactcatgcactccggtgcatcgacaaagctggtgggatc 427
             ||||||| ||||||||| || || || || || || |||||||||||||| || || || 
Sbjct: 38029 cacattaaagtcaaagtcacaacacacgctcttcgctgcatcgacaaagcaggaggaata 37970

                                                               
Query: 428   gatgaatacctcctgaagacaccttacaacaaaatggatactgagatggg 477
             || || ||||| ||||| ||||| ||| | || ||||| || ||||||||
Sbjct: 37969 gacgagtacctgctgaaaacaccataccaaaagatggacacagagatggg 37920
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>emb|BX828035.1|CNS0A4CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZH04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1440

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 218 gtcgtcatgggccgggccaagcgcggcatcttcgccggccgccacatccagt 269
           |||||||||||| | ||||| |||||  ||| ||||||||||||||||||||
Sbjct: 311 gtcgtcatgggcagagccaaacgcggtctctacgccggccgccacatccagt 362
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>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19,
              complete sequence
          Length = 188940

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 965    ttatttaattaatttatatttga 987
              |||||||||||||||||||||||
Sbjct: 143032 ttatttaattaatttatatttga 143010



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 965    ttatttaattaatttatatttga 987
              |||||||||||||||||||||||
Sbjct: 147959 ttatttaattaatttatatttga 147937
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>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22,
             complete sequence
          Length = 183103

 Score = 44.1 bits (22), Expect = 0.96
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 964   cttatttaattaatttatattt 985
             ||||||||||||||||||||||
Sbjct: 72753 cttatttaattaatttatattt 72732
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>ref|XM_001022586.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00624600)
            mRNA, complete cds
          Length = 2019

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 966  tatttaattaatttatatttg 986
            |||||||||||||||||||||
Sbjct: 1246 tatttaattaatttatatttg 1226
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>dbj|AK241099.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065077L20, full
            insert sequence
          Length = 2226

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  gatactgagatgggaatagcc 484
            |||||||||||||||||||||
Sbjct: 1743 gatactgagatgggaatagcc 1763
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>emb|CR388207.13| Zebrafish DNA sequence from clone CH211-28E16 in linkage group 23,
             complete sequence
          Length = 191838

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 968   tttaattaatttatatttgac 988
             |||||||||||||||||||||
Sbjct: 82355 tttaattaatttatatttgac 82335
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>emb|AM236085.1| Rhizobium leguminosarum bv. viciae plasmid pRL11 complete genome, strain
              3841
          Length = 684202

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 164    aagctgccggcggaggtgatggaca 188
              ||||||||||||||||||| |||||
Sbjct: 209244 aagctgccggcggaggtgacggaca 209268
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>gb|AC136472.40| Medicago truncatula clone mth2-24f21, complete sequence
          Length = 121922

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 44974 ttatttaattaatttatattt 44994
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>emb|CR759797.14| Zebrafish DNA sequence from clone DKEY-87K14 in linkage group 17,
              complete sequence
          Length = 181261

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 753    ggtgccattattaatggtaaa 773
              |||||||||||||||||||||
Sbjct: 164417 ggtgccattattaatggtaaa 164437
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>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 27839 ttatttaattaatttatattt 27859
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>emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in linkage group 18,
             complete sequence
          Length = 148650

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 15241 ttatttaattaatttatattt 15221
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>emb|BX936425.7| Zebrafish DNA sequence from clone CH211-39L24 in linkage group 17,
             complete sequence
          Length = 173763

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 753   ggtgccattattaatggtaaa 773
             |||||||||||||||||||||
Sbjct: 43607 ggtgccattattaatggtaaa 43587
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>gb|AC104212.3| Homo sapiens chromosome 8, clone RP11-941H19, complete sequence
          Length = 196806

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 965    ttatttaattaatttatattt 985
              |||||||||||||||||||||
Sbjct: 135530 ttatttaattaatttatattt 135550
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 464      gatactgagatgggaatagcc 484
                |||||||||||||||||||||
Sbjct: 27704884 gatactgagatgggaatagcc 27704904
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 151     gggcggggaggggaagctgccggcggagg 179
               ||||| ||||||||||| |||||||||||
Sbjct: 2877925 gggcgaggaggggaagcggccggcggagg 2877897
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>emb|AL590084.9| Human DNA sequence from clone RP11-191A15 on chromosome 6 Contains the
             5' end of the CMAH gene for cytidine
             monophosphate-N-acetylneuraminic acid hydroxylase
             (CMP-N-acetylneuraminate monooxygenase) (CSAH), an aryl
             hydrocarbon receptor (AHR) pseudogene and an
             ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
             (UBE2D3) (UBCH5C) pseudogene, complete sequence
          Length = 94539

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 84668 ttatttaattaatttatattt 84648
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>emb|AL445251.4| Human DNA sequence from clone RP11-704L16 on chromosome 10 Contains the
             5' end of the HPSE2 gene for heparanase 2 and a CpG
             island, complete sequence
          Length = 123482

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   gtgggcggggaggggaagctg 169
             |||||||||||||||||||||
Sbjct: 98581 gtgggcggggaggggaagctg 98561
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>emb|BX957240.10| Zebrafish DNA sequence from clone DKEY-39A4 in linkage group 22,
             complete sequence
          Length = 108385

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 33900 ttatttaattaatttatattt 33880
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>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 965    ttatttaattaatttatattt 985
              |||||||||||||||||||||
Sbjct: 230834 ttatttaattaatttatattt 230814
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>gb|AY232580.1| Donacia clavareaui isolate N65 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 450

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 965 ttatttaattaatttatattt 985
           |||||||||||||||||||||
Sbjct: 259 ttatttaattaatttatattt 279
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>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0011H15
          Length = 130146

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 464    gatactgagatgggaatagcc 484
              |||||||||||||||||||||
Sbjct: 102228 gatactgagatgggaatagcc 102248
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>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1125_C01
          Length = 123849

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 464   gatactgagatgggaatagcc 484
             |||||||||||||||||||||
Sbjct: 37806 gatactgagatgggaatagcc 37826
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>emb|CR354426.9| Zebrafish DNA sequence from clone DKEY-48G21 in linkage group 1,
             complete sequence
          Length = 196432

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 86686 ttatttaattaatttatattt 86706
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>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0017O03
          Length = 180651

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 151   gggcggggaggggaagctgccggcggagg 179
             ||||| ||||||||||| |||||||||||
Sbjct: 68917 gggcgaggaggggaagcggccggcggagg 68889
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>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14,
             complete sequence
          Length = 164868

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 11318 ttatttaattaatttatattt 11298
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>emb|BX004874.11| Zebrafish DNA sequence from clone CH211-39E15 in linkage group 19,
              complete sequence
          Length = 165154

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 965    ttatttaattaatttatattt 985
              |||||||||||||||||||||
Sbjct: 112950 ttatttaattaatttatattt 112930
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>gb|AC151311.2| Xenopus tropicalis clone ISB-158O8, complete sequence
          Length = 87840

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 67043 ttatttaattaatttatattt 67023
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>emb|AL844579.10| Mouse DNA sequence from clone RP23-219M22 on chromosome 2, complete
             sequence
          Length = 103290

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   tcaggagaaacgtcttttcag 351
             |||||||||||||||||||||
Sbjct: 35676 tcaggagaaacgtcttttcag 35656
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>gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, complete sequence
          Length = 209499

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 75028 ttatttaattaatttatattt 75048
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>gb|AC102550.9| Mus musculus chromosome 18, clone RP23-153A8, complete sequence
          Length = 177220

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 965    ttatttaattaatttatattt 985
              |||||||||||||||||||||
Sbjct: 140730 ttatttaattaatttatattt 140750
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>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
             sequence
          Length = 218889

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 965   ttatttaattaatttatattt 985
             |||||||||||||||||||||
Sbjct: 28448 ttatttaattaatttatattt 28428
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>emb|Z93715.1|MTAT93715 A.tabida 16S rRNA gene, partial
          Length = 366

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 965 ttatttaattaatttatattt 985
           |||||||||||||||||||||
Sbjct: 188 ttatttaattaatttatattt 168


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 176,835,452
Number of extensions: 9365539
Number of successful extensions: 202221
Number of sequences better than 10.0: 45
Number of HSP's gapped: 202217
Number of HSP's successfully gapped: 56
Length of query: 1009
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 986
Effective length of database: 18,503,978,556
Effective search space: 18244922856216
Effective search space used: 18244922856216
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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