| Clone Name | FLbaf113n22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063264.1| Oryza sativa (japonica cultivar-group) Os06g0136800 (Os06g0136800) mRNA, complete cds Length = 1237 Score = 902 bits (455), Expect = 0.0 Identities = 754/853 (88%), Gaps = 3/853 (0%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 90 |||| |||||||||| | | ||||||| || |||||||||||||||||||| ||||||| Sbjct: 37 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 96 Query: 91 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 147 |||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 97 ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 156 Query: 148 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 207 | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| ||||||||| Sbjct: 157 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 216 Query: 208 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 267 ||||||||||||||||| |||| || || || ||||||||||||||||||||||| |||| Sbjct: 217 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 276 Query: 268 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | Sbjct: 277 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 336 Query: 328 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 387 |||| |||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| Sbjct: 337 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 396 Query: 388 atattgatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcg 447 ||| |||||||| || |||||||||||| |||| |||||| ||||||||||||| || | Sbjct: 397 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttg 456 Query: 448 acgacacaaagaagattcttctatacatcaacggtccaggaggagatcttacaccatgca 507 | |||| || ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 457 ataacactaaaaagattcttctatacattaatggtccaggaggagatcttacaccatgca 516 Query: 508 tggcgttatatgataccatgctaagcctaaagagtccaattggtacccattgcctgggct 567 |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 517 tggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggct 576 Query: 568 ttgcattcaacttggcaggattcattcttgcagctggtcaaaagggttcacgtactggta 627 |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 577 ttgcattcaacttggcaggatttattcttgcagctggtgaaaagggttcacgtacgggta 636 Query: 628 tgcctctttgccgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatg 687 ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 637 tgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggctgatg 696 Query: 688 atatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttatggcaagctag 747 |||||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||| | Sbjct: 697 atatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgt 756 Query: 748 cagagcacacgggtcattctgttgagaaggttcacgaggacttgtccaggtcgaagcgct 807 |||||||||| |||||| ||||||| ||| |||| || || | || ||| |||||||| Sbjct: 757 cagagcacacaggtcatcctgttgataagattcatgaagatctatctagggtgaagcgct 816 Query: 808 tcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggccttctcgga 867 |||| || |||||||| |||| || ||||| || |||||||| | ||||||||||| | Sbjct: 817 tcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgca 876 Query: 868 tcaagaaagaggg 880 ||||||||||||| Sbjct: 877 tcaagaaagaggg 889 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 903 aagaaggatctacgtaatctgggacttggctagtagatg 941
>dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G04, full insert sequence Length = 1133 Score = 902 bits (455), Expect = 0.0 Identities = 754/853 (88%), Gaps = 3/853 (0%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 90 |||| |||||||||| | | ||||||| || |||||||||||||||||||| ||||||| Sbjct: 24 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 83 Query: 91 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 147 |||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 84 ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 143 Query: 148 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 207 | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| ||||||||| Sbjct: 144 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 203 Query: 208 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 267 ||||||||||||||||| |||| || || || ||||||||||||||||||||||| |||| Sbjct: 204 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 263 Query: 268 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | Sbjct: 264 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 323 Query: 328 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 387 |||| |||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| Sbjct: 324 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 383 Query: 388 atattgatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcg 447 ||| |||||||| || |||||||||||| |||| |||||| ||||||||||||| || | Sbjct: 384 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttg 443 Query: 448 acgacacaaagaagattcttctatacatcaacggtccaggaggagatcttacaccatgca 507 | |||| || ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 444 ataacactaaaaagattcttctatacattaatggtccaggaggagatcttacaccatgca 503 Query: 508 tggcgttatatgataccatgctaagcctaaagagtccaattggtacccattgcctgggct 567 |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 504 tggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggct 563 Query: 568 ttgcattcaacttggcaggattcattcttgcagctggtcaaaagggttcacgtactggta 627 |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 564 ttgcattcaacttggcaggatttattcttgcagctggtgaaaagggttcacgtacgggta 623 Query: 628 tgcctctttgccgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatg 687 ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 624 tgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggctgatg 683 Query: 688 atatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttatggcaagctag 747 |||||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||| | Sbjct: 684 atatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgt 743 Query: 748 cagagcacacgggtcattctgttgagaaggttcacgaggacttgtccaggtcgaagcgct 807 |||||||||| |||||| ||||||| ||| |||| || || | || ||| |||||||| Sbjct: 744 cagagcacacaggtcatcctgttgataagattcatgaagatctatctagggtgaagcgct 803 Query: 808 tcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggccttctcgga 867 |||| || |||||||| |||| || ||||| || |||||||| | ||||||||||| | Sbjct: 804 tcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgca 863 Query: 868 tcaagaaagaggg 880 ||||||||||||| Sbjct: 864 tcaagaaagaggg 876 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 890 aagaaggatctacgtaatctgggacttggctagtagatg 928
>dbj|AK099815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L17, full insert sequence Length = 1243 Score = 902 bits (455), Expect = 0.0 Identities = 754/853 (88%), Gaps = 3/853 (0%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 90 |||| |||||||||| | | ||||||| || |||||||||||||||||||| ||||||| Sbjct: 42 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 101 Query: 91 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 147 |||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 102 ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 161 Query: 148 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 207 | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| ||||||||| Sbjct: 162 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 221 Query: 208 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 267 ||||||||||||||||| |||| || || || ||||||||||||||||||||||| |||| Sbjct: 222 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 281 Query: 268 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | Sbjct: 282 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 341 Query: 328 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 387 |||| |||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| Sbjct: 342 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 401 Query: 388 atattgatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcg 447 ||| |||||||| || |||||||||||| |||| |||||| ||||||||||||| || | Sbjct: 402 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttg 461 Query: 448 acgacacaaagaagattcttctatacatcaacggtccaggaggagatcttacaccatgca 507 | |||| || ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 462 ataacactaaaaagattcttctatacattaatggtccaggaggagatcttacaccatgca 521 Query: 508 tggcgttatatgataccatgctaagcctaaagagtccaattggtacccattgcctgggct 567 |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 522 tggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggct 581 Query: 568 ttgcattcaacttggcaggattcattcttgcagctggtcaaaagggttcacgtactggta 627 |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 582 ttgcattcaacttggcaggatttattcttgcagctggtgaaaagggttcacgtacgggta 641 Query: 628 tgcctctttgccgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatg 687 ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 642 tgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggctgatg 701 Query: 688 atatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttatggcaagctag 747 |||||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||| | Sbjct: 702 atatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgt 761 Query: 748 cagagcacacgggtcattctgttgagaaggttcacgaggacttgtccaggtcgaagcgct 807 |||||||||| |||||| ||||||| ||| |||| || || | || ||| |||||||| Sbjct: 762 cagagcacacaggtcatcctgttgataagattcatgaagatctatctagggtgaagcgct 821 Query: 808 tcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggccttctcgga 867 |||| || |||||||| |||| || ||||| || |||||||| | ||||||||||| | Sbjct: 822 tcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgca 881 Query: 868 tcaagaaagaggg 880 ||||||||||||| Sbjct: 882 tcaagaaagaggg 894 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 908 aagaaggatctacgtaatctgggacttggctagtagatg 946
>dbj|AK061385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A01, full insert sequence Length = 1133 Score = 902 bits (455), Expect = 0.0 Identities = 754/853 (88%), Gaps = 3/853 (0%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccgcgccg 90 |||| |||||||||| | | ||||||| || |||||||||||||||||||| ||||||| Sbjct: 24 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 83 Query: 91 tcgcc---agctcgccctcctctctcagcgtgggcaccaaggtcttcgtcgggctgaagg 147 |||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 84 ccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaagg 143 Query: 148 cgcagacgaggctcggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctaca 207 | ||||| | ||| |||||||| ||||||||||||||||| |||| |||| ||||||||| Sbjct: 144 cccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctaca 203 Query: 208 ccgccgtcaaccggagggtctcccttgggttgtcaaacaagagggctaccagggcacgca 267 ||||||||||||||||| |||| || || || ||||||||||||||||||||||| |||| Sbjct: 204 ccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgca 263 Query: 268 tttcaatgatgcctgtcggcacaccacgggtaccttacagaacacctggtgaaggaacct 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | Sbjct: 264 tttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaactt 323 Query: 328 ggcagtggcttgacatatggaatgctttatatcgtgaacggattatcttcattggggaca 387 |||| |||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| Sbjct: 324 ggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggaca 383 Query: 388 atattgatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcg 447 ||| |||||||| || |||||||||||| |||| |||||| ||||||||||||| || | Sbjct: 384 gtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttg 443 Query: 448 acgacacaaagaagattcttctatacatcaacggtccaggaggagatcttacaccatgca 507 | |||| || ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 444 ataacactaaaaagattcttctatacattaatggtccaggaggagatcttacaccatgca 503 Query: 508 tggcgttatatgataccatgctaagcctaaagagtccaattggtacccattgcctgggct 567 |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 504 tggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggct 563 Query: 568 ttgcattcaacttggcaggattcattcttgcagctggtcaaaagggttcacgtactggta 627 |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 564 ttgcattcaacttggcaggatttattcttgcagctggtgaaaagggttcacgtacgggta 623 Query: 628 tgcctctttgccgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatg 687 ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 624 tgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggctgatg 683 Query: 688 atatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttatggcaagctag 747 |||||||||| ||| |||| ||||||| | ||||||||||||||||||| ||||| | Sbjct: 684 atatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgt 743 Query: 748 cagagcacacgggtcattctgttgagaaggttcacgaggacttgtccaggtcgaagcgct 807 |||||||||| |||||| ||||||| ||| |||| || || | || ||| |||||||| Sbjct: 744 cagagcacacaggtcatcctgttgataagattcatgaagatctatctagggtgaagcgct 803 Query: 808 tcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggccttctcgga 867 |||| || |||||||| |||| || ||||| || |||||||| | ||||||||||| | Sbjct: 804 tcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgca 863 Query: 868 tcaagaaagaggg 880 ||||||||||||| Sbjct: 864 tcaagaaagaggg 876 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 890 aagaaggatctacgtaatctgggacttggctagtagatg 928
>gb|BT017217.1| Zea mays clone EL01N0372E04.c mRNA sequence Length = 1252 Score = 678 bits (342), Expect = 0.0 Identities = 708/830 (85%) Strand = Plus / Plus Query: 52 cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 111 ||||||| |||| |||||| ||||||||||| ||||| ||||||| |||| || |||| Sbjct: 51 cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 110 Query: 112 tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 171 ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| | Sbjct: 111 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 170 Query: 172 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 231 ||||||| |||||||| |||| ||| ||||| |||| || ||||||||||| |||| | Sbjct: 171 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 230 Query: 232 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 291 | ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || | Sbjct: 231 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 290 Query: 292 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 351 |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 291 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 350 Query: 352 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 411 || | || ||||| |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 351 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 410 Query: 412 aagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctat 471 |||| ||||||||||||| ||||||||||| | || | | || ||||| | |||| Sbjct: 411 aagtgttggcaagcatgctctatcttgacagcattgataattccaaaaagataatgctat 470 Query: 472 acatcaacggtccaggaggagatcttacaccatgcatggcgttatatgataccatgctaa 531 |||| || || ||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 471 acattaatggaccaggaggagatcttactccgtgtatggcactatatgataccatgctaa 530 Query: 532 gcctaaagagtccaattggtacccattgcctgggctttgcattcaacttggcaggattca 591 | ||||| ||||| ||||| || || ||| ||||||||||||||||| |||||||||||| Sbjct: 531 gtctaaaaagtcctattggcactcactgcttgggctttgcattcaacctggcaggattca 590 Query: 592 ttcttgcagctggtcaaaagggttcacgtactggtatgcctctttgccgtgtttcacttc 651 | |||||||| ||| ||||||||||||| |||||||||||||| ||||| ||||||| | Sbjct: 591 tccttgcagccggtgaaaagggttcacgcactggtatgcctctatgccggatttcactcc 650 Query: 652 agtcacctgctggggcagctcgaggccaggctgatgatatagaaaacgaatcaaacgaac 711 | |||||||| || ||||||||||| |||||||| ||||||||||||||| ||||||| | Sbjct: 651 aatcacctgccggagcagctcgaggacaggctgacgatatagaaaacgaagcaaacgagc 710 Query: 712 ttaatcggatcaagaactatctttatggcaagctagcagagcacacgggtcattctgttg 771 ||| || |||||||||||||| ||||||||||| || | |||||| || |||||||| | Sbjct: 711 ttatccgcatcaagaactatctctatggcaagctcgcggggcacacaggccattctgtcg 770 Query: 772 agaaggttcacgaggacttgtccaggtcgaagcgcttcgacgccgaaggagccctggagt 831 ||||| | || |||||| |||| ||| ||||||||||||||||||||| || || |||| Sbjct: 771 agaagatccatgaggacctgtctagggtgaagcgcttcgacgccgaaggggctctcgagt 830 Query: 832 acgggatcatcgaccgtatcgtcaggccttctcggatcaagaaagagggc 881 ||||||||||||||||||| |||||||| ||| ||||||||||||||||| Sbjct: 831 acgggatcatcgaccgtattgtcaggccgtctaggatcaagaaagagggc 880
>gb|AY105451.1| Zea mays PCO122767 mRNA sequence Length = 709 Score = 402 bits (203), Expect = e-108 Identities = 413/483 (85%) Strand = Plus / Plus Query: 399 gaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgtcgacgacacaaag 458 |||||||| |||||||| ||||||||||||| ||||||||||| | || | | || Sbjct: 11 gaattcagcaaccaagtgttggcaagcatgctctatcttgacagcattgataattccaaa 70 Query: 459 aagattcttctatacatcaacggtccaggaggagatcttacaccatgcatggcgttatat 518 ||||| | |||||||| || || ||||||||||||||||| || || ||||| ||||| Sbjct: 71 aagataatgctatacattaatggaccaggaggagatcttactccgtgtatggcactatat 130 Query: 519 gataccatgctaagcctaaagagtccaattggtacccattgcctgggctttgcattcaac 578 |||||||||||||| ||||| ||||| ||||| || || ||| ||||||||||||||||| Sbjct: 131 gataccatgctaagtctaaaaagtcctattggcactcactgcttgggctttgcattcaac 190 Query: 579 ttggcaggattcattcttgcagctggtcaaaagggttcacgtactggtatgcctctttgc 638 ||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| ||| Sbjct: 191 ctggcaggattcatccttgcagccggtgaaaagggttcacgcactggtatgcctctatgc 250 Query: 639 cgtgtttcacttcagtcacctgctggggcagctcgaggccaggctgatgatatagaaaac 698 || ||||||| || |||||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 251 cggatttcactccaatcacctgccggagcagctcgaggacaggctgacgatatagaaaac 310 Query: 699 gaatcaaacgaacttaatcggatcaagaactatctttatggcaagctagcagagcacacg 758 ||| ||||||| |||| || |||||||||||||| ||||||||||| || | |||||| Sbjct: 311 gaagcaaacgagcttatccgcatcaagaactatctctatggcaagctcgcggggcacaca 370 Query: 759 ggtcattctgttgagaaggttcacgaggacttgtccaggtcgaagcgcttcgacgccgaa 818 || |||||||| |||||| | || |||||| |||| ||| ||||||||||||||||||| Sbjct: 371 ggccattctgtcgagaagatccatgaggacctgtctagggtgaagcgcttcgacgccgaa 430 Query: 819 ggagccctggagtacgggatcatcgaccgtatcgtcaggccttctcggatcaagaaagag 878 || || || ||||||||||||||||||||||| |||||||| ||| |||||||||||||| Sbjct: 431 ggggctctcgagtacgggatcatcgaccgtattgtcaggccgtctaggatcaagaaagag 490 Query: 879 ggc 881 ||| Sbjct: 491 ggc 493
>gb|AY105157.1| Zea mays PCO115092 mRNA sequence Length = 481 Score = 331 bits (167), Expect = 3e-87 Identities = 335/391 (85%) Strand = Plus / Plus Query: 52 cggcgcccgccaactcctcctgcttccacccccgcgccgtcgccagctcgccctcctctc 111 ||||||| |||| |||||| ||||||||||| ||||| ||||||| |||| || |||| Sbjct: 54 cggcgccggccagctcctcatgcttccacccacgcgcgaccgccagcccgccgtcttctc 113 Query: 112 tcagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagacgaggctcggctcgtcag 171 ||||||| ||||||||||||||||||||||| | ||||||||| | |||||| ||||| | Sbjct: 114 tcagcgtcggcaccaaggtcttcgtcgggctcagggcgcagaccaagctcggttcgtcgg 173 Query: 172 agtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccggagggtctccc 231 ||||||| |||||||| |||| ||| ||||| |||| || ||||||||||| |||| | Sbjct: 174 agtcgtcatgcccgaatgtcagcgctgggttccacactgcggtcaaccggagaatctctc 233 Query: 232 ttgggttgtcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacac 291 | ||||||| || |||| ||| ||||| || ||||| || ||||||||| | || || | Sbjct: 234 tcaggttgtccaaaaagaaggcgaccagagcccgcatctcgatgatgcctattggtactc 293 Query: 292 cacgggtaccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatg 351 |||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 294 cacgtgtgccttaccgaacacctggtgaaggaacctggcaatggcttgacatatggaacg 353 Query: 352 ctttatatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaacc 411 || | || ||||| |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 354 ctctgtaccgtgagcggattatcttcattggggacaatatagatgaagaattcagcaacc 413 Query: 412 aagtactggcaagcatgctgtatcttgacag 442 |||| ||||||||||||| ||||||||||| Sbjct: 414 aagtgttggcaagcatgctctatcttgacag 444
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 178 bits (90), Expect = 3e-41 Identities = 111/118 (94%) Strand = Plus / Plus Query: 495 cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 554 ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 1951074 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 1951133 Query: 555 cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 612 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 1951134 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 1951191 Score = 170 bits (86), Expect = 7e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 240 tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 299 ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1949403 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 1949462 Query: 300 ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 353 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1949463 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 1949516 Score = 139 bits (70), Expect = 3e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 357 tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 416 ||||| ||||| ||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 1949630 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 1949689 Query: 417 ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 476 |||| |||||| ||||||||||||| || || |||| || ||||||||||||||||| Sbjct: 1949690 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 1949749 Query: 477 aacggtccaggaggagat 494 || ||||||||||||||| Sbjct: 1949750 aatggtccaggaggagat 1949767 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 609 aagggttcacgtactggtatgcctctttgccgtgtttcacttcagtcacctgctggggca 668 |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 1951279 aagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagca 1951338 Query: 669 gctcgaggccagg 681 |||||||| |||| Sbjct: 1951339 gctcgagggcagg 1951351 Score = 97.6 bits (49), Expect = 9e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 678 caggctgatgatatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttat 737 |||||||||||||||||||| ||| |||| ||||||| | ||||||||||||||||||| Sbjct: 1951451 caggctgatgatatagaaaatgaagcaaatgaacttattaggatcaagaactatctttac 1951510 Query: 738 ggcaagctagcagagcacacgggtcattctgttgagaaggt 778 ||||| | |||||||||| |||||| ||||||| ||||| Sbjct: 1951511 agcaagttgtcagagcacacaggtcatcctgttgataaggt 1951551 Score = 95.6 bits (48), Expect = 4e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 162 ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 221 |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct: 1948856 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 1948915 Query: 222 agggtctc 229 ||| |||| Sbjct: 1948916 aggatctc 1948923 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 113 cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 154 |||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1948699 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 1948740 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 800 gaagcgcttcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggcc 859 |||||||||||| || |||||||| |||| || ||||| || |||||||| | ||||| Sbjct: 1951848 gaagcgcttcgatgctgaaggagctttggaatatgggattattgaccgtattattaggcc 1951907 Query: 860 ttctcggatcaagaaagaggg 880 |||||| |||||||||||||| Sbjct: 1951908 ttctcgcatcaagaaagaggg 1951928 Score = 60.0 bits (30), Expect = 2e-05 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccg---cg 87 |||| |||||||||| | | ||||||| || |||||||||||||||||||| || || Sbjct: 1948492 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 1948551 Query: 88 ccgtcgccagctcgccctcctctctcag 115 ||| ||||||| ||||||| |||||||| Sbjct: 1948552 ccgccgccagcgcgccctcatctctcag 1948579 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 1951942 aagaaggatctacgtaatctgggacttggctagtagatg 1951980
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 178 bits (90), Expect = 3e-41 Identities = 111/118 (94%) Strand = Plus / Plus Query: 495 cttacaccatgcatggcgttatatgataccatgctaagcctaaagagtccaattggtacc 554 ||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 79854 cttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtact 79913 Query: 555 cattgcctgggctttgcattcaacttggcaggattcattcttgcagctggtcaaaagg 612 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 79914 cattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagg 79971 Score = 170 bits (86), Expect = 7e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 240 tcaaacaagagggctaccagggcacgcatttcaatgatgcctgtcggcacaccacgggta 299 ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 78183 tcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtg 78242 Query: 300 ccttacagaacacctggtgaaggaacctggcagtggcttgacatatggaatgct 353 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 78243 ccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgct 78296 Score = 139 bits (70), Expect = 3e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 357 tatcgtgaacggattatcttcattggggacaatattgatgaagaattcagtaaccaagta 416 ||||| ||||| ||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 78410 tatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagta 78469 Query: 417 ctggcaagcatgctgtatcttgacagtgtcgacgacacaaagaagattcttctatacatc 476 |||| |||||| ||||||||||||| || || |||| || ||||||||||||||||| Sbjct: 78470 ttggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacatt 78529 Query: 477 aacggtccaggaggagat 494 || ||||||||||||||| Sbjct: 78530 aatggtccaggaggagat 78547 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 609 aagggttcacgtactggtatgcctctttgccgtgtttcacttcagtcacctgctggggca 668 |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 80059 aagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagca 80118 Query: 669 gctcgaggccagg 681 |||||||| |||| Sbjct: 80119 gctcgagggcagg 80131 Score = 97.6 bits (49), Expect = 9e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 678 caggctgatgatatagaaaacgaatcaaacgaacttaatcggatcaagaactatctttat 737 |||||||||||||||||||| ||| |||| ||||||| | ||||||||||||||||||| Sbjct: 80231 caggctgatgatatagaaaatgaagcaaatgaacttattaggatcaagaactatctttac 80290 Query: 738 ggcaagctagcagagcacacgggtcattctgttgagaaggt 778 ||||| | |||||||||| |||||| ||||||| ||||| Sbjct: 80291 agcaagttgtcagagcacacaggtcatcctgttgataaggt 80331 Score = 95.6 bits (48), Expect = 4e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 162 ggctcgtcagagtcgtcgtgcccgaacgtcaacgcccggttctacaccgccgtcaaccgg 221 |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct: 77636 ggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccgg 77695 Query: 222 agggtctc 229 ||| |||| Sbjct: 77696 aggatctc 77703 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 113 cagcgtgggcaccaaggtcttcgtcgggctgaaggcgcagac 154 |||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 77479 cagcgtgggcaccaaggtcttcgtcgggttgaaggcccagac 77520 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 800 gaagcgcttcgacgccgaaggagccctggagtacgggatcatcgaccgtatcgtcaggcc 859 |||||||||||| || |||||||| |||| || ||||| || |||||||| | ||||| Sbjct: 80628 gaagcgcttcgatgctgaaggagctttggaatatgggattattgaccgtattattaggcc 80687 Query: 860 ttctcggatcaagaaagaggg 880 |||||| |||||||||||||| Sbjct: 80688 ttctcgcatcaagaaagaggg 80708 Score = 60.0 bits (30), Expect = 2e-05 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 31 ctccaatggcgctgtgccggacggcgcccgccaactcctcctgcttccacccccg---cg 87 |||| |||||||||| | | ||||||| || |||||||||||||||||||| || || Sbjct: 77272 ctccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccg 77331 Query: 88 ccgtcgccagctcgccctcctctctcag 115 ||| ||||||| ||||||| |||||||| Sbjct: 77332 ccgccgccagcgcgccctcatctctcag 77359 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 900 aagaaggaactgcggaatctgggactcggctagtagatg 938 |||||||| || || ||||||||||| |||||||||||| Sbjct: 80722 aagaaggatctacgtaatctgggacttggctagtagatg 80760
>gb|AY279311.1| Malus x domestica ATP-dependent Clp protease proteolytic subunit mRNA, partial cds Length = 364 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatatagaaaacgaatcaaacgaa 710 ||||| ||||| ||||| ||||| || ||||||||||||||| |||| ||| |||| ||| Sbjct: 100 cagtctcctgccggggctgctcgtggtcaggctgatgatatacaaaatgaagcaaatgaa 159 Query: 711 ctt 713 ||| Sbjct: 160 ctt 162
>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence Length = 127132 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 306 agaacacctggtgaaggaacctggcagtggcttgacatatggaatgc 352 |||||||||||||||||||| ||||| ||| |||| |||||||||| Sbjct: 37162 agaacacctggtgaaggaacttggcaatgggttgatttatggaatgc 37116 Score = 42.1 bits (21), Expect = 4.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 393 gatgaagaattcagtaaccaagtactggcaagcatgctgtatcttgacagtgt 445 ||||||||||| || || ||| || |||||| ||||||||||||||||||| Sbjct: 36892 gatgaagaattaagcaatcaaatattggcaactttgctgtatcttgacagtgt 36840
>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence Length = 154129 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 676 gccaggctgatgatatagaaaac 698 ||||||||||||||||||||||| Sbjct: 148708 gccaggctgatgatatagaaaac 148686
>gb|AC158683.2| Mus musculus 6 BAC RP23-328P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203488 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 676 gccaggctgatgatatagaaaac 698 ||||||||||||||||||||||| Sbjct: 143768 gccaggctgatgatatagaaaac 143790
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 cgctgtgccggacggcgcccgcc 62 ||||||||||||||||||||||| Sbjct: 384387 cgctgtgccggacggcgcccgcc 384409
>gb|AC188176.2| Gallus gallus BAC clone CH261-115E11 from chromosome z, complete sequence Length = 210463 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 cacaaagaagattcttctata 472 ||||||||||||||||||||| Sbjct: 82687 cacaaagaagattcttctata 82707
>ref|NM_101113.2| Arabidopsis thaliana CLPR2; endopeptidase Clp (CLPR2) mRNA, complete cds Length = 1062 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 639 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 679
>gb|AY665221.1| Saimiri boliviensis reticulon 1 mRNA, partial cds Length = 263 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 gggcagctcgaggccaggctg 684 ||||||||||||||||||||| Sbjct: 262 gggcagctcgaggccaggctg 242
>gb|AY081641.1| Arabidopsis thaliana similar to nClpP2 dbj|BAA82066.1 (At1g12410) mRNA, complete cds Length = 871 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 577 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 617
>emb|AL354738.13| Human DNA sequence from clone RP11-628O6 on chromosome 9 Contains part of a novel gene (FLJ20276), complete sequence Length = 64981 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1030 tggatgtatgtcatttaatctgttg 1054 |||||| |||||||||||||||||| Sbjct: 28659 tggatggatgtcatttaatctgttg 28635
>gb|AY062770.1| Arabidopsis thaliana similar to nClpP2 (At1g12410; F5O11.13) mRNA, complete cds Length = 968 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 624 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 664
>gb|AY057617.1| Arabidopsis thaliana At1g12410/F5O11_7 mRNA, complete cds Length = 994 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 635 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 675
>gb|AF029167.1|AF029167 Ateles paniscus chamek neuroendocrine-specific protein (NSP) gene, partial cds tpg|BK001692.1| TPA_inf: Ateles belzebuth chamek RTN1-Aw (RTN1) mRNA, partial cds; alternatively spliced Length = 263 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 gggcagctcgaggccaggctg 684 ||||||||||||||||||||| Sbjct: 262 gggcagctcgaggccaggctg 242
>dbj|AB022327.1| Arabidopsis thaliana mRNA for nClpP2 (nuclear encoded ClpP2), complete cds Length = 999 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 615 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 655
>emb|BX813571.1|CNS0AAJF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 577 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 617
>emb|BX841886.1|CNS09Y1Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1001 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 614 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 654
>emb|BX842500.1|CNS0ABM0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH3ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 651 cagtcacctgctggggcagctcgaggccaggctgatgatat 691 |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 361 cagtcaccagctggtgcagcccgtggtcaggctgatgatat 401 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 180,586,568 Number of extensions: 8839381 Number of successful extensions: 167650 Number of sequences better than 10.0: 26 Number of HSP's gapped: 167642 Number of HSP's successfully gapped: 51 Length of query: 1202 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1179 Effective length of database: 18,503,978,556 Effective search space: 21816190717524 Effective search space used: 21816190717524 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)