Clone Information

BLAST Search Result

Clone Name	FLbaf113m23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	O23290:RL36A_ARATH 60S ribosomal protein L36a - Arabidopsis thal...	162	9e-40
2	Q96499:RL44_GOSHI 60S ribosomal protein L44 - Gossypium hirsutum...	158	2e-38
3	Q9HF88:RL44_CRYNE 60S ribosomal protein L44 - Cryptococcus neofo...	134	3e-31
4	O59870:RL44_PHARH 60S ribosomal protein L44 - Phaffia rhodozyma ...	134	4e-31
5	Q9UWE4:RL44_COPCI 60S ribosomal protein L44 - Coprinus cinereus ...	132	2e-30
6	P52809:RL44_PICJA 60S ribosomal protein L44 - Pichia jadinii (Ye...	129	8e-30
7	Q9UTI8:RL44_SCHPO 60S ribosomal protein L44 - Schizosaccharomyce...	129	1e-29
8	Q4PNY0:RL44_CANGY 60S ribosomal protein L44 - Candida glycerinog...	127	3e-29
9	Q9UVB8:RL44_PICCI 60S ribosomal protein L44 - Pichia ciferrii (Y...	127	4e-29
10	Q00477:RL44P_CANMA 60S ribosomal protein L44 P - Candida maltosa...	127	4e-29
11	P31866:RL44_PICGU 60S ribosomal protein L44 - Pichia guilliermon...	127	5e-29
12	Q6BLK0:RL44_DEBHA 60S ribosomal protein L44 - Debaryomyces hanse...	127	5e-29
13	P02405:RL44_YEAST 60S ribosomal protein L42 - Saccharomyces cere...	125	1e-28
14	Q6CFS7:RL44_YARLI 60S ribosomal protein L44 - Yarrowia lipolytic...	125	2e-28
15	P27076:RL44_KLUMA 60S ribosomal protein L44 - Kluyveromyces marx...	124	3e-28
16	P31027:RL44_KLULA 60S ribosomal protein L44 - Kluyveromyces lact...	124	4e-28
17	P31028:RL44_DEBOC 60S ribosomal protein L44 - Debaryomyces occid...	124	4e-28
18	P27074:RL44Q_CANMA 60S ribosomal protein L44 Q - Candida maltosa...	122	1e-27
19	P27075:RL44_CANTR 60S ribosomal protein L44 - Candida tropicalis...	122	1e-27
20	Q754N8:RL44_ASHGO 60S ribosomal protein L44 - Ashbya gossypii (Y...	120	5e-27
21	P48166:RL44_CAEEL 60S ribosomal protein L44 - Caenorhabditis ele...	119	1e-26
22	P49213:RL44_CHLRE 60S ribosomal protein L44 - Chlamydomonas rein...	119	1e-26
23	P83883:RL36A_RAT 60S ribosomal protein L36a - Rattus norvegicus ...	117	4e-26
24	P83884:RL36A_PIG 60S ribosomal protein L36a - Sus scrofa (Pig)	117	4e-26
25	P83882:RL36A_MOUSE 60S ribosomal protein L36a - Mus musculus (Mo...	117	4e-26
26	P61487:RL36A_ICTPU 60S ribosomal protein L36a - Ictalurus puncta...	117	4e-26
27	P83881:RL36A_HUMAN 60S ribosomal protein L36a - Homo sapiens (Hu...	117	4e-26
28	P61486:RL36A_FUGRU 60S ribosomal protein L36a - Fugu rubripes (J...	117	4e-26
29	P61485:RL36A_DANRE 60S ribosomal protein L36a - Danio rerio (Zeb...	117	4e-26
30	Q3SZ59:RL36A_BOVIN 60S ribosomal protein L36a - Bos taurus (Bovine)	117	4e-26
31	P90702:RL44_BRUMA 60S ribosomal protein L44 - Brugia malayi (Fil...	116	7e-26
32	Q969Q0:RL36L_HUMAN 60S ribosomal protein L36a-like - Homo sapien...	116	1e-25
33	Q5R9D2:RL36L_PONPY 60S ribosomal protein L36a-like - Pongo pygma...	114	3e-25
34	Q9NB33:RL44_AEDTR 60S ribosomal protein L44 - Aedes triseriatus ...	112	1e-24
35	O97231:RL44_PLAF7 60S ribosomal protein L44 - Plasmodium falcipa...	107	4e-23
36	P17843:RL44_TRYBB 60S ribosomal protein L44 - Trypanosoma brucei...	103	8e-22
37	Q8SR18:RL44_ENCCU 60S ribosomal protein L44 - Encephalitozoon cu...	90	7e-18
38	Q9YF00:RL44_AERPE 50S ribosomal protein L44E - Aeropyrum pernix	50	6e-06
39	Q9HIX1:RL44_THEAC 50S ribosomal protein L44E - Thermoplasma acid...	49	2e-05
40	Q8U475:RL44_PYRFU 50S ribosomal protein L44E - Pyrococcus furiosus	42	0.002
41	Q9UXZ2:RL44_PYRAB 50S ribosomal protein L44E - Pyrococcus abyssi	42	0.003
42	P54027:RL44_METJA 50S ribosomal protein L44E - Methanococcus jan...	39	0.015
43	O59603:RL44_PYRHO 50S ribosomal protein L44E - Pyrococcus horiko...	39	0.020
44	O27365:RL44_METTH 50S ribosomal protein L44E - Methanobacterium ...	35	0.28
45	P0C214:P30II_HTL1A Accessory protein p30II - Human T-cell leukem...	33	1.4
46	O28936:RL44_ARCFU 50S ribosomal protein L44E - Archaeoglobus ful...	32	1.8
47	P48998:INVO_RAT Involucrin - Rattus norvegicus (Rat)	32	2.4
48	P06921:VE2_HPV05 Regulatory protein E2 - Human papillomavirus ty...	31	5.4
49	Q66HD5:CLIP4_RAT CAP-Gly domain-containing linker protein 4 - Ra...	30	7.0
50	Q4AAS1:SYI_MYCHJ Isoleucyl-tRNA synthetase - Mycoplasma hyopneum...	30	9.1
51	Q4A8Y0:SYI_MYCH7 Isoleucyl-tRNA synthetase - Mycoplasma hyopneum...	30	9.1
52	Q602B7:SYI_MYCH2 Isoleucyl-tRNA synthetase - Mycoplasma hyopneum...	30	9.1
53	Q9Z2Q1:SC31A_RAT Protein transport protein Sec31A - Rattus norve...	30	9.1
54	P30414:NKTR_HUMAN NK-tumor recognition protein - Homo sapiens (H...	30	9.1
55	P50767:VE2_HPV21 Regulatory protein E2 - Human papillomavirus ty...	26	9.6

>O23290:RL36A_ARATH 60S ribosomal protein L36a - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 105
 Score =  162 bits (411), Expect = 9e-40
 Identities = 78/105 (74%), Positives = 82/105 (78%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 458
                  IVL+LQCQSCKH+SQR IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105

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>Q96499:RL44_GOSHI 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton)|
           (Gossypium mexicanum)
          Length = 105

 Score =  158 bits (399), Expect = 2e-38
 Identities = 77/105 (73%), Positives = 79/105 (75%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 458
                  IVL+LQCQ CKH SQ  IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105

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>Q9HF88:RL44_CRYNE 60S ribosomal protein L44 - Cryptococcus neoformans (Filobasidiella|
           neoformans)
          Length = 106

 Score =  134 bits (338), Expect = 3e-31
 Identities = 64/104 (61%), Positives = 73/104 (70%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT HKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK   Q A+KRCKHFE+GGDKK +G ++
Sbjct: 61  KAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAAI 104

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>O59870:RL44_PHARH 60S ribosomal protein L44 - Phaffia rhodozyma (Yeast)|
           (Xanthophyllomyces dendrorhous)
          Length = 106

 Score =  134 bits (336), Expect = 4e-31
 Identities = 63/104 (60%), Positives = 72/104 (69%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK+  Q  +KRCKHFE+GGDKK KG ++
Sbjct: 61  KAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAAI 104

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>Q9UWE4:RL44_COPCI 60S ribosomal protein L44 - Coprinus cinereus (Inky cap fungus)|
           (Hormographiella aspergillata)
          Length = 106

 Score =  132 bits (331), Expect = 2e-30
 Identities = 62/104 (59%), Positives = 73/104 (70%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK+  Q ++KRCKHFE+GG+KK KG +L
Sbjct: 61  KAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAAL 104

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>P52809:RL44_PICJA 60S ribosomal protein L44 - Pichia jadinii (Yeast) (Candida utilis)|
          Length = 106

 Score =  129 bits (325), Expect = 8e-30
 Identities = 64/104 (61%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q A+KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 104

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>Q9UTI8:RL44_SCHPO 60S ribosomal protein L44 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 106

 Score =  129 bits (323), Expect = 1e-29
 Identities = 59/104 (56%), Positives = 73/104 (70%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT+H+VTQYKKG DS  AQGKRRYDRKQSG+GGQTKPVFH 
Sbjct: 1   MVNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C SCK+ +Q  +KRCKHFE+GG+KK KG ++
Sbjct: 61  KAKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGAAI 104

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>Q4PNY0:RL44_CANGY 60S ribosomal protein L44 - Candida glycerinogenes (Yeast)|
          Length = 106

 Score =  127 bits (320), Expect = 3e-29
 Identities = 62/104 (59%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL +QGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTRKTYCKGKQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C +CK   Q ++KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAAL 104

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>Q9UVB8:RL44_PICCI 60S ribosomal protein L44 - Pichia ciferrii (Yeast)|
          Length = 106

 Score =  127 bits (319), Expect = 4e-29
 Identities = 62/104 (59%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q ++KRCKHFE+GGD+K KG +L
Sbjct: 61  KAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKGQAL 104

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>Q00477:RL44P_CANMA 60S ribosomal protein L44 P - Candida maltosa (Yeast)|
          Length = 106

 Score =  127 bits (319), Expect = 4e-29
 Identities = 62/104 (59%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH 
Sbjct: 1   MVNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q A+KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 104

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>P31866:RL44_PICGU 60S ribosomal protein L44 - Pichia guilliermondii (Yeast) (Candida|
           guilliermondii)
          Length = 106

 Score =  127 bits (318), Expect = 5e-29
 Identities = 62/104 (59%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH 
Sbjct: 1   MVNVPKTRRTYCKGKDCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q ++KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104

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>Q6BLK0:RL44_DEBHA 60S ribosomal protein L44 - Debaryomyces hansenii (Yeast)|
           (Torulaspora hansenii)
          Length = 106

 Score =  127 bits (318), Expect = 5e-29
 Identities = 62/104 (59%), Positives = 70/104 (67%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTKPVFH 
Sbjct: 1   MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q ++KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104

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>P02405:RL44_YEAST 60S ribosomal protein L42 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 106

 Score =  125 bits (315), Expect = 1e-28
 Identities = 61/104 (58%), Positives = 70/104 (67%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFH 
Sbjct: 1   MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK  +Q  +KRCKHFE+GG+KK KG +L
Sbjct: 61  KAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQAL 104

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>Q6CFS7:RL44_YARLI 60S ribosomal protein L44 - Yarrowia lipolytica (Candida|
           lipolytica)
          Length = 106

 Score =  125 bits (314), Expect = 2e-28
 Identities = 61/104 (58%), Positives = 69/104 (66%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTK +FH 
Sbjct: 1   MVNIPKTRNTYCKGKECRKHTQHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKQIFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C  CK   Q A+KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLRLECVKCKVKMQLALKRCKHFELGGDKKQKGQAL 104

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>P27076:RL44_KLUMA 60S ribosomal protein L44 - Kluyveromyces marxianus (Yeast)|
           (Candida kefyr)
          Length = 106

 Score =  124 bits (312), Expect = 3e-28
 Identities = 60/104 (57%), Positives = 71/104 (68%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H+ HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH 
Sbjct: 1   MVNVPKTRKTYCKGKACRKHSQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C SCK  +Q A+KRCKHFE+GG+KK KG +L
Sbjct: 61  KAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 104

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>P31027:RL44_KLULA 60S ribosomal protein L44 - Kluyveromyces lactis (Yeast) (Candida|
           sphaerica)
          Length = 106

 Score =  124 bits (311), Expect = 4e-28
 Identities = 60/104 (57%), Positives = 70/104 (67%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +FH 
Sbjct: 1   MVNVPKTRKTYCKGKECRKHAQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C SCK  +Q A+KRCKHFE+GG+KK KG +L
Sbjct: 61  KAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 104

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>P31028:RL44_DEBOC 60S ribosomal protein L44 - Debaryomyces occidentalis (Yeast)|
           (Schwanniomyces occidentalis)
          Length = 106

 Score =  124 bits (311), Expect = 4e-28
 Identities = 61/104 (58%), Positives = 69/104 (66%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTK +FH 
Sbjct: 1   MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VLKL+C  CK  +Q ++KRCKHFE+GGDKK KG +L
Sbjct: 61  KAKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104

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>P27074:RL44Q_CANMA 60S ribosomal protein L44 Q - Candida maltosa (Yeast)|
          Length = 106

 Score =  122 bits (307), Expect = 1e-27
 Identities = 60/104 (57%), Positives = 68/104 (65%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH 
Sbjct: 1   MVNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  IVLKL+C  CK   Q  +KRCKH E+GG+KK KG +L
Sbjct: 61  KAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104

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>P27075:RL44_CANTR 60S ribosomal protein L44 - Candida tropicalis (Yeast)|
          Length = 106

 Score =  122 bits (306), Expect = 1e-27
 Identities = 60/104 (57%), Positives = 68/104 (65%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN+P              HT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFH 
Sbjct: 1   MVNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  IVLKL+C  CK   Q  +KRCKH E+GG+KK KG +L
Sbjct: 61  KAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104

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>Q754N8:RL44_ASHGO 60S ribosomal protein L44 - Ashbya gossypii (Yeast) (Eremothecium|
           gossypii)
          Length = 106

 Score =  120 bits (301), Expect = 5e-27
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTK +F  
Sbjct: 1   MVNVPKTRKTYCKGKACRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKQIFRK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSL 455
                  +VL+L+C SCK  +Q  +KRCKHFE+GG+KK KG +L
Sbjct: 61  KAKTTKKVVLRLECLSCKTKAQLPLKRCKHFELGGEKKQKGQAL 104

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>P48166:RL44_CAEEL 60S ribosomal protein L44 - Caenorhabditis elegans|
          Length = 105

 Score =  119 bits (298), Expect = 1e-26
 Identities = 58/101 (57%), Positives = 67/101 (66%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT HKVTQYKKGK+S  AQG+RRYDRKQSG+GGQTKP+F  
Sbjct: 1   MVNVPKARRTFCDGKCRK-HTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRK 59

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+++C  CKH  Q  IKRCKHFE+GG KK +G
Sbjct: 60  KAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100

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>P49213:RL44_CHLRE 60S ribosomal protein L44 - Chlamydomonas reinhardtii|
          Length = 99

 Score =  119 bits (297), Expect = 1e-26
 Identities = 60/98 (61%), Positives = 65/98 (66%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNVPKTKRAFCKGCKK--HMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHK 58

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKK 437
                  IVL++QCQ CK    + +KRCKHFEIGGDKK
Sbjct: 59  KAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKK 96

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>P83883:RL36A_RAT 60S ribosomal protein L36a - Rattus norvegicus (Rat)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P83884:RL36A_PIG 60S ribosomal protein L36a - Sus scrofa (Pig)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P83882:RL36A_MOUSE 60S ribosomal protein L36a - Mus musculus (Mouse)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P61487:RL36A_ICTPU 60S ribosomal protein L36a - Ictalurus punctatus (Channel catfish)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTYCKKCKK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P83881:RL36A_HUMAN 60S ribosomal protein L36a - Homo sapiens (Human)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P61486:RL36A_FUGRU 60S ribosomal protein L36a - Fugu rubripes (Japanese pufferfish)|
           (Takifugu rubripes)
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTYCKKCKK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P61485:RL36A_DANRE 60S ribosomal protein L36a - Danio rerio (Zebrafish) (Brachydanio|
           rerio)
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTYCKKCKK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>Q3SZ59:RL36A_BOVIN 60S ribosomal protein L36a - Bos taurus (Bovine)|
          Length = 106

 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/103 (60%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>P90702:RL44_BRUMA 60S ribosomal protein L44 - Brugia malayi (Filarial nematode worm)|
          Length = 105

 Score =  116 bits (291), Expect = 7e-26
 Identities = 56/101 (55%), Positives = 66/101 (65%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT+HKVTQYKKGK+S  AQG+RRYD KQ G+GGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCDGKCRR-HTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRK 59

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+++C  CKH  Q  IKRCKHFE+GG KK +G
Sbjct: 60  KAKTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKKTRG 100

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>Q969Q0:RL36L_HUMAN 60S ribosomal protein L36a-like - Homo sapiens (Human)|
          Length = 106

 Score =  116 bits (290), Expect = 1e-25
 Identities = 61/103 (59%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>Q5R9D2:RL36L_PONPY 60S ribosomal protein L36a-like - Pongo pygmaeus (Orangutan)|
          Length = 106

 Score =  114 bits (286), Expect = 3e-25
 Identities = 60/103 (58%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H  HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F  
Sbjct: 1   MVNVPKTRRTFCKKCGK--HQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQC--QSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+L+C   +C+     AIKRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101

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>Q9NB33:RL44_AEDTR 60S ribosomal protein L44 - Aedes triseriatus (Mosquito)|
           (Ochlerotatus triseriatus)
          Length = 104

 Score =  112 bits (280), Expect = 1e-24
 Identities = 53/101 (52%), Positives = 66/101 (65%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              H +HKVTQYKK K+  ++QG+RRYDRKQ G+GGQTKP+F  
Sbjct: 1   MVNVPKQRRTYCKKCKV--HRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRK 58

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKG 446
                  IVL+++C  CK+  Q  +KRCKHFE+GGDKK KG
Sbjct: 59  KAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKG 99

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>O97231:RL44_PLAF7 60S ribosomal protein L44 - Plasmodium falciparum (isolate 3D7)|
          Length = 104

 Score =  107 bits (267), Expect = 4e-23
 Identities = 54/105 (51%), Positives = 67/105 (63%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVNVP              HT+HKV+QYKKGK+ LS+ G+RRYD KQ G+GGQTKPVF  
Sbjct: 1   MVNVPKTRKTYCSNKCKK-HTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKK 59

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKKGKGTSLF 458
                  IVLKL+C  CK    + +KRCK FE+G DKK KG +++
Sbjct: 60  KAKTTKKIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKKGGAVY 104

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>P17843:RL44_TRYBB 60S ribosomal protein L44 - Trypanosoma brucei brucei|
          Length = 106

 Score =  103 bits (256), Expect = 8e-22
 Identities = 52/98 (53%), Positives = 57/98 (58%)
 Frame = +3

Query: 144 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHX 323
           MVN P              H   KV QYK GK  L A+GKRRYDRKQSGYGGQTKP+FH 
Sbjct: 1   MVNYPKKKKMHCPDERCNAHKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHK 60

Query: 324 XXXXXXXIVLKLQCQSCKHYSQRAIKRCKHFEIGGDKK 437
                  IVLKLQC +CK   Q  +KR KHFE+   KK
Sbjct: 61  KAKTTKKIVLKLQCSNCKSIIQNVLKRTKHFELNDKKK 98

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>Q8SR18:RL44_ENCCU 60S ribosomal protein L44 - Encephalitozoon cuniculi|
          Length = 104

 Score = 90.1 bits (222), Expect = 7e-18
 Identities = 42/85 (49%), Positives = 54/85 (63%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 380
           ++ HKV+Q KK KD+  AQG RRY RKQ GYGGQTKP+          +VL L+C  CK 
Sbjct: 18  YSAHKVSQAKKSKDNPRAQGNRRYARKQRGYGGQTKPILRRKAKVTKKLVLNLECTKCKF 77

Query: 381 YSQRAIKRCKHFEIGGDKKGKGTSL 455
             Q+ +KR KH   GG++K KG +L
Sbjct: 78  SHQKPLKRAKHVIFGGERKRKGEAL 102

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>Q9YF00:RL44_AERPE 50S ribosomal protein L44E - Aeropyrum pernix|
          Length = 95

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 30/58 (51%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 374
           HT H+V QY+ GK    A G+RRY RKQ GYG Q +P            VL + C  C
Sbjct: 17  HTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVC 74

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>Q9HIX1:RL44_THEAC 50S ribosomal protein L44E - Thermoplasma acidophilum|
          Length = 93

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/74 (37%), Positives = 34/74 (45%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSCKH 380
           HT H V + +K K S    G+RR+ R  SGYGG  +P F         I L+L C  C  
Sbjct: 17  HTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHK 76

Query: 381 YSQRAIKRCKHFEI 422
                  R K FEI
Sbjct: 77  AITPPGIRAKKFEI 90

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>Q8U475:RL44_PYRFU 50S ribosomal protein L44E - Pyrococcus furiosus|
          Length = 94

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 377
           HT+HKV + KK   S  + G+RR+ R   GYGG  +P           + L+ +C  C K
Sbjct: 17  HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGK 76

Query: 378 HYSQRAIKRCKHFEI 422
            +++    R K FE+
Sbjct: 77  AHTRGRGFRVKKFEL 91

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>Q9UXZ2:RL44_PYRAB 50S ribosomal protein L44E - Pyrococcus abyssi|
          Length = 94

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 377
           HT+HKV + KK   S  + G+RR+ R   GYGG  +P           + L+ +C  C K
Sbjct: 17  HTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTVCGK 76

Query: 378 HYSQRAIKRCKHFEI 422
            +++    R K FE+
Sbjct: 77  AHTRGRGFRVKKFEL 91

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>P54027:RL44_METJA 50S ribosomal protein L44E - Methanococcus jannaschii|
          Length = 94

 Score = 39.3 bits (90), Expect = 0.015
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 374
           HT+H V + KKGK S    G+R++ R  +GYGG  +P+          I L+ +C  C
Sbjct: 17  HTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPL-PDRSKPVKKIDLRFKCTEC 73

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>O59603:RL44_PYRHO 50S ribosomal protein L44E - Pyrococcus horikoshii|
          Length = 94

 Score = 38.9 bits (89), Expect = 0.020
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC-K 377
           HT+HKV + K+   S  + G+RR+ R   GYGG  +P           + L+  C  C +
Sbjct: 17  HTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVKKLDLRFVCTVCGR 76

Query: 378 HYSQRAIKRCKHFEI 422
            +++    R K FE+
Sbjct: 77  AHTRGKGFRVKRFEL 91

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>O27365:RL44_METTH 50S ribosomal protein L44E - Methanobacterium thermoautotrophicum|
          Length = 92

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHXXXXXXXXIVLKLQCQSC 374
           HT+H+V + K+ K S    G+R++ R  +GY G  +P+          + L+L+C+ C
Sbjct: 17  HTVHEVLESKRRKASELKWGQRQFRRVTAGYRGYPRPL-PSGNKPVKKLDLRLKCKEC 73

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>P0C214:P30II_HTL1A Accessory protein p30II - Human T-cell leukemia virus 1 (strain|
           Japan ATK-1 subtype A) (HTLV-1)
          Length = 241

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
 Frame = +1

Query: 199 STHFTRSL------STKRVRTVCL-PRENVVMTGSSRDMVVRPSLSSTRRQKPPRRLC*S 357
           S+ F+RS       S +R R+ C+ PR      G  R    RP LSS++  KP      S
Sbjct: 57  SSSFSRSFFRFLFSSARRCRSRCVSPRGGAFSPGGPRRS--RPRLSSSKDSKP------S 108

Query: 358 CSARAASTTPSVPSRDASILRSVETRRARGHLFSKLRS 471
            +A ++S + +  S+D S   +  T R+ GH   K R+
Sbjct: 109 STASSSSLSFNSSSKDNSPSTNSSTSRSSGHDTGKHRN 146

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>O28936:RL44_ARCFU 50S ribosomal protein L44E - Archaeoglobus fulgidus|
          Length = 93

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
 Frame = +3

Query: 201 HTLHKVTQYKKGKDS----LSAQGKRRYD----RKQSGYGGQTKPVFHXXXXXXXXIVLK 356
           HTLH+V +  KGK S    ++ Q KRR       K S   G  KP           + ++
Sbjct: 17  HTLHEVERVSKGKASSLNWINRQKKRRGKVGNLGKFSKVPGGDKPT--------KRVNIR 68

Query: 357 LQCQSCKHYSQRAIKRCKHFEI 422
            +C  CK    R   R K FE+
Sbjct: 69  FRCTECKKAHHRPTWRAKRFEL 90

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>P48998:INVO_RAT Involucrin - Rattus norvegicus (Rat)|
          Length = 568

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 35/113 (30%), Positives = 47/113 (41%)
 Frame = +2

Query: 71  PAATCRNSSTRKRSTPELHLLGRQNGERSEDQEDLLQKQGVQEAHTSQGHSVQKG*GQSV 250
           P    R    ++    ELHL G+Q  + S + E  L KQ  QE+H  + H + K   Q  
Sbjct: 240 PELCLRKQQQQESHERELHL-GKQQQQESHEPELHLGKQQHQESHEPELH-LGKQQHQES 297

Query: 251 CPGKTSL*QEAVGIWWSDQACLPQEGKNHQEDCAEAAVPELQALLPACHQEMQ 409
           C  +  L ++             QE + HQE C     PEL  L    HQE Q
Sbjct: 298 CEPELHLGEQQ-----------HQEQQQHQESCE----PELH-LGKQQHQETQ 334

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>P06921:VE2_HPV05 Regulatory protein E2 - Human papillomavirus type 5|
          Length = 514

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 31/97 (31%), Positives = 41/97 (42%)
 Frame = +1

Query: 157 RRPRRPTAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSSTRRQKP 336
           R   R  +++RS   TH TR  ST R R+  L +    +T  SR     P+       + 
Sbjct: 271 RHRSRSRSRSRSKSQTHTTR--STTRSRSTSLTKTR-ALTSRSRSRGRSPTTCRRGGGRS 327

Query: 337 PRRLC*SCSARAASTTPSVPSRDASILRSVETRRARG 447
           PRR   S S  ++ TT       A    S  TR ARG
Sbjct: 328 PRRRSRSPSTSSSCTTQRSQRARA---ESSTTRGARG 361

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>Q66HD5:CLIP4_RAT CAP-Gly domain-containing linker protein 4 - Rattus norvegicus|
           (Rat)
          Length = 599

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
 Frame = +1

Query: 175 TAKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMVVRPSLSST-------RRQK 333
           T+K  S   T    + S     T+ LPR   + T +  D      +SS+        +Q 
Sbjct: 382 TSKVNSGLMTSKKENASES---TLSLPRSEELKTVAKNDATQPGCISSSSSTSSLDHKQS 438

Query: 334 PPRRLC*SCSA--RAASTTPSVPSRDASILRSVETRRA 441
            P++L  S S+  +  S +PS+PSR ++ L+S  T  A
Sbjct: 439 HPKKLSTSSSSGKKTLSKSPSLPSRASAGLKSSTTSAA 476

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>Q4AAS1:SYI_MYCHJ Isoleucyl-tRNA synthetase - Mycoplasma hyopneumoniae (strain J /|
           ATCC 25934 / NCTC 10110)
          Length = 886

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 631 GFKLQNFLGQKVAPYLNARHRSLDT*QGLINLAP 530
           G K  + + +K+ P ++  H SLD   GL++LAP
Sbjct: 293 GIKYLHPIFEKICPIVSGNHVSLDVGSGLVHLAP 326

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>Q4A8Y0:SYI_MYCH7 Isoleucyl-tRNA synthetase - Mycoplasma hyopneumoniae (strain 7448)|
          Length = 886

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 631 GFKLQNFLGQKVAPYLNARHRSLDT*QGLINLAP 530
           G K  + + +K+ P ++  H SLD   GL++LAP
Sbjct: 293 GIKYLHPIFEKICPIVSGNHVSLDVGSGLVHLAP 326

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>Q602B7:SYI_MYCH2 Isoleucyl-tRNA synthetase - Mycoplasma hyopneumoniae (strain 232)|
          Length = 886

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 631 GFKLQNFLGQKVAPYLNARHRSLDT*QGLINLAP 530
           G K  + + +K+ P ++  H SLD   GL++LAP
Sbjct: 293 GIKYLHPIFEKICPIVSGNHVSLDVGSGLVHLAP 326

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>Q9Z2Q1:SC31A_RAT Protein transport protein Sec31A - Rattus norvegicus (Rat)|
          Length = 1249

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 25/136 (18%)
 Frame = +1

Query: 103  KEKHAGAPSPRPSKW*TFRRPRRPTAKTRSARS-----------------THFTRSLSTK 231
            +  HA  P P  +    F   ++P A+T    S                     ++L T+
Sbjct: 1075 RSSHASFPQPHLAGGQPFHGIQQPLAQTGMPPSFSKPNTEGAPGAPIGNTIQHVQALPTE 1134

Query: 232  RVRTVCLPRENVVMTGSSRDMVVRPSLSSTRRQKPPRRL--------C*SCSARAASTTP 387
            ++    +P E++++  +  D++ R  LSS    +  R+L        C     R  + +P
Sbjct: 1135 KITKKPIPDEHLILKTTFEDLIQR-CLSSATDPQTKRKLDDASKRLECLYDKLRDQTLSP 1193

Query: 388  SVPSRDASILRSVETR 435
            ++ S   SI RS+ETR
Sbjct: 1194 TIISGLHSIARSIETR 1209

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>P30414:NKTR_HUMAN NK-tumor recognition protein - Homo sapiens (Human)|
          Length = 1462

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
 Frame = +1

Query: 127 SPRPSKW*TFRRPRRPT---AKTRSARSTHFTRSLSTKRVRTVCLPRENVVMTGSSRDMV 297
           SP PS+W   ++P +P+    +   A++TH     ST  +        N+  TGSS    
Sbjct: 613 SPPPSRWKPGQKPWKPSYERIQEMKAKTTHLLPIQSTYSL-------ANIKETGSSSSYH 665

Query: 298 VRPSLSSTRRQKPPRRLC*SCSARAASTTP---SVPSRDASILRSVETRRARGHLFSKLR 468
            R   S + +    +      S R++ ++P   S  SR  S  RS    R+     S+ R
Sbjct: 666 KREKNSESDQSTYSK-----YSDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSR 720

Query: 469 SP 474
           SP
Sbjct: 721 SP 722

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>P50767:VE2_HPV21 Regulatory protein E2 - Human papillomavirus type 21|
          Length = 503

 Score = 26.2 bits (56), Expect(2) = 9.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 32  ATAQGHKTTPLSLPAATCRNSSTRKRSTPELHLLGRQNGER 154
           A +    TTP +   +T R SSTRK+S  + +  GR+ G R
Sbjct: 211 ADSNTSSTTPATTTDSTSRLSSTRKQS-QQTNTKGRRYGRR 250



 Score = 22.3 bits (46), Expect(2) = 9.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 157 RRPRRPTAKTRSARSTHFTRSLSTK 231
           R  RRP+++TR    TH  R   +K
Sbjct: 246 RYGRRPSSRTRRTTQTHQRRRSRSK 270


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 118,309,136
Number of extensions: 2451019
Number of successful extensions: 5865
Number of sequences better than 10.0: 55
Number of HSP's gapped: 5848
Number of HSP's successfully gapped: 56
Length of query: 238
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 128
Effective length of database: 70,513,989
Effective search space: 9025790592
Effective search space used: 9025790592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result