ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf116m05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120984:Os05g0490100 | 209 | 8e-55 | 2 | AK122128:Os01g0276000 | 206 | 1e-53 | 3 | AK119715:Os01g0276000 | 206 | 1e-53 | 4 | AK058917:Os01g0276000 | 206 | 1e-53 | 5 | AK062929:Os01g0812800 | 188 | 2e-48 | 6 | AK062885: | 144 | 3e-35 | 7 | Os05g0355300:Os05g0355300 | 29 | 2.5 | 8 | AB078634:Os03g0128700 | 28 | 4.3 | 9 | X81393:Os03g0128700 | 28 | 4.3 | 10 | BT014683:Os03g0128700 | 28 | 4.3 | 11 | AY158077:Os03g0128700 | 28 | 4.3 | 12 | AK066500:Os03g0128700 | 28 | 4.3 | 13 | AF048691:Os03g0128700 | 28 | 4.3 | 14 | Os06g0574400:Os06g0574400 | 28 | 5.7 | 15 | AK106486:Os04g0634000 | 27 | 7.4 | 16 | AK106462:Os02g0684900 | 27 | 9.5 |
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>AK120984:Os05g0490100 | Length = 112 Score = 209 bits (533), Expect = 8e-55 Identities = 99/112 (88%), Positives = 105/112 (93%) Frame = +1 Query: 88 VASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSEI 267 +A TKK KKS DNINNKLQLVMKSGKYTLGYKTVL+TLRNSK KL+ILANNCPPLRKSEI Sbjct: 1 MAPTKKAKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEI 60 Query: 268 EYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINATPAGQ 423 EYYAML KV+VHH+HGNNVDLGTACGKY+RVCCLSIIDPGDSDIIN TPA Q Sbjct: 61 EYYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTPASQ 112
>AK122128:Os01g0276000 | Length = 111 Score = 206 bits (523), Expect = 1e-53 Identities = 98/108 (90%), Positives = 103/108 (95%) Frame = +1 Query: 88 VASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSEI 267 + + KKTKKS DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVI++NNCPPLRKSEI Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60 Query: 268 EYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINAT 411 EYYAMLAKVTVHH+HGNNVDLGTACGKYFRVCCLSIIDPGDSDII T Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT 108
>AK119715:Os01g0276000 | Length = 111 Score = 206 bits (523), Expect = 1e-53 Identities = 98/108 (90%), Positives = 103/108 (95%) Frame = +1 Query: 88 VASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSEI 267 + + KKTKKS DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVI++NNCPPLRKSEI Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60 Query: 268 EYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINAT 411 EYYAMLAKVTVHH+HGNNVDLGTACGKYFRVCCLSIIDPGDSDII T Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT 108
>AK058917:Os01g0276000 | Length = 111 Score = 206 bits (523), Expect = 1e-53 Identities = 98/108 (90%), Positives = 103/108 (95%) Frame = +1 Query: 88 VASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSEI 267 + + KKTKKS DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVI++NNCPPLRKSEI Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60 Query: 268 EYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINAT 411 EYYAMLAKVTVHH+HGNNVDLGTACGKYFRVCCLSIIDPGDSDII T Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT 108
>AK062929:Os01g0812800 | Length = 112 Score = 188 bits (478), Expect = 2e-48 Identities = 87/109 (79%), Positives = 99/109 (90%) Frame = +1 Query: 88 VASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSEI 267 +A KKTKK+ + INNKLQLVMKSGKYTLGYKTVL+TLRNSK KLVI+ANNCPPLRKSEI Sbjct: 1 MAPVKKTKKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEI 60 Query: 268 EYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINATP 414 EYYAML KV+V+H++GNNVDLGTACGKY+RVCCLS++DPGDSDI P Sbjct: 61 EYYAMLGKVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLP 109
>AK062885: | Length = 110 Score = 144 bits (364), Expect = 3e-35 Identities = 70/108 (64%), Positives = 91/108 (84%) Frame = +1 Query: 85 MVASTKKTKKSGDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVILANNCPPLRKSE 264 MVAS KKTKK+ +NIN++LQLVM+SGK LGYK +++LR++KAKLV++A N PPL KSE Sbjct: 1 MVAS-KKTKKTTENINSRLQLVMRSGKVALGYKQTMKSLRSTKAKLVLIAANTPPLVKSE 59 Query: 265 IEYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPGDSDIINA 408 +EYY+MLAK VHH+ G+N DLGTACGKYFRV ++I+D GDSDI+ + Sbjct: 60 VEYYSMLAKTPVHHFAGSNNDLGTACGKYFRVGVMTILDAGDSDILRS 107
>Os05g0355300:Os05g0355300 | Length = 249 Score = 28.9 bits (63), Expect = 2.5 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 284 WRRSLSTTTMETMLIWELPVVNTSESAA*ASLTLVT 391 W RSL+ T +L+W L V T E+A + +LVT Sbjct: 140 WCRSLTITFTIMLLVWHLIAVVTIEAADHCAFSLVT 175
>AB078634:Os03g0128700 | Length = 542 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 2 GNQCQNGTLGSDYHNRFPREH 22
>X81393:Os03g0128700 | Length = 542 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 2 GNQCQNGTLGSDYHNRFPREH 22
>BT014683:Os03g0128700 | Length = 541 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 1 GNQCQNGTLGSDYHNRFPREH 21
>AY158077:Os03g0128700 | Length = 542 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 2 GNQCQNGTLGSDYHNRFPREH 22
>AK066500:Os03g0128700 | Length = 542 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 2 GNQCQNGTLGSDYHNRFPREH 22
>AF048691:Os03g0128700 | Length = 542 Score = 28.1 bits (61), Expect = 4.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 382 GQ*CSSSRLGSIYHRQFPNQH 320 G C + LGS YH +FP +H Sbjct: 2 GNQCQNGTLGSDYHNRFPREH 22
>Os06g0574400:Os06g0574400 | Length = 1609 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/50 (26%), Positives = 22/50 (44%) Frame = +1 Query: 238 NCPPLRKSEIEYYAMLAKVTVHHYHGNNVDLGTACGKYFRVCCLSIIDPG 387 NCP L +S ++ + +H V+L KY R C + ++ G Sbjct: 697 NCPRLVQSVVKLLVKQGSMEIHSSQIKGVNLLKVLSKYNRQTCFNFVNTG 746
>AK106486:Os04g0634000 | Length = 823 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 67 SPRGATMVASTKKTKKSGDNINNKLQLVMKSGKYTLGY 180 +PR A+ T + G NI + LV G +TLG+ Sbjct: 22 APRAFAAAAAVTDTLRGGRNITDGETLVSADGTFTLGF 59
>AK106462:Os02g0684900 | Length = 431 Score = 26.9 bits (58), Expect = 9.5 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 557 NR*SHET*LTDK*CTQDQIKSSKNYTLEH 471 NR H + D+ CTQ I S NY++ H Sbjct: 314 NRDHHNSRQVDRECTQPSIASMANYSVTH 342 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,648,444 Number of extensions: 349252 Number of successful extensions: 816 Number of sequences better than 10.0: 16 Number of HSP's gapped: 816 Number of HSP's successfully gapped: 16 Length of query: 192 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 97 Effective length of database: 11,595,960 Effective search space: 1124808120 Effective search space used: 1124808120 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
