ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf116k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108110: 31 1.2
2AK119852: 30 2.8

>AK108110: |
          Length = 314
 Score = 30.8 bits (68), Expect = 1.2
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 279 APFCKCVPKKGAGLTDGSMLPSDGRGDPADQVGASKLINIEDSFYTPCPDG 431
           A F   V   G GL DG  + +DG    ADQVG + L    DS+ +    G
Sbjct: 164 AHFDVAVDGDGVGLGDGDAVTADGVPVNADQVGLADLFAFADSWSSVADGG 214



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>AK119852: |
          Length = 859

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
 Frame = +3

Query: 285  FCKCVPKKGAGLTDG--SMLPSDGRGDPADQVGASKLI-----NIEDSFYTPCPDGMVQK 443
            FC C   K A   DG  + LP++    PA     +  +     ++   + T      +  
Sbjct: 722  FCTCKQTKNAPFCDGAHANLPAEAAAAPAAAAAPAPAVDESQYDLRTKYATIAARAPIGV 781

Query: 444  CIFVGTTPF-CGCVPKKGAGLTDGSMSSTANKP 539
             +  G T + C C   K     DGS + T  KP
Sbjct: 782  AVEAGKTYYWCTCGKSKNQPFCDGSHTGTEFKP 814


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,958,914
Number of extensions: 570497
Number of successful extensions: 1502
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1498
Number of HSP's successfully gapped: 2
Length of query: 283
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 184
Effective length of database: 11,435,796
Effective search space: 2104186464
Effective search space used: 2104186464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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