| Clone Name | FLbaf116k22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC069538.10| Homo sapiens chromosome 10 clone RP11-205C5, complete sequence Length = 169772 Score = 48.1 bits (24), Expect = 0.052 Identities = 24/24 (100%) Strand = Plus / Minus Query: 85 tgctctgcctccagctccacacct 108 |||||||||||||||||||||||| Sbjct: 162685 tgctctgcctccagctccacacct 162662
>emb|AL358817.19| Human DNA sequence from clone RP11-399N22 on chromosome 10 Contains 3' end of the ADAMTS14 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 14, a novel gene (FLJ32820), and a ribosomal protein S26 pseudogene, complete sequence Length = 134358 Score = 48.1 bits (24), Expect = 0.052 Identities = 24/24 (100%) Strand = Plus / Plus Query: 85 tgctctgcctccagctccacacct 108 |||||||||||||||||||||||| Sbjct: 55761 tgctctgcctccagctccacacct 55784
>gb|AC145291.3| Homo sapiens chromosome 8, clone WI2-82799H6, complete sequence Length = 41705 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 gctctgcctccagctccacacc 107 |||||||||||||||||||||| Sbjct: 12445 gctctgcctccagctccacacc 12466
>ref|XM_624290.2| PREDICTED: Apis mellifera similar to lethal (2) k05713 CG8256-PC, isoform C (LOC551904), mRNA Length = 2202 Score = 44.1 bits (22), Expect = 0.81 Identities = 25/26 (96%) Strand = Plus / Minus Query: 791 ttttatattacttataatggaataat 816 |||||||| ||||||||||||||||| Sbjct: 40 ttttatatcacttataatggaataat 15
>gb|AC110280.8| Homo sapiens chromosome 8, clone CTD-3232M19, complete sequence Length = 91099 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 86 gctctgcctccagctccacacc 107 |||||||||||||||||||||| Sbjct: 48321 gctctgcctccagctccacacc 48300
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 44.1 bits (22), Expect = 0.81 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 agaaccagccatggacaccaccaaga 57 ||||||||| |||||||||||||||| Sbjct: 3500 agaaccagctatggacaccaccaaga 3525
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 709 tttatatacatgttgtattttt 730 |||||||||||||||||||||| Sbjct: 24300226 tttatatacatgttgtattttt 24300205
>gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, complete sequence Length = 175699 Score = 44.1 bits (22), Expect = 0.81 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 agaaccagccatggacaccaccaaga 57 ||||||||| |||||||||||||||| Sbjct: 150640 agaaccagctatggacaccaccaaga 150615
>emb|AL162851.10| Human DNA sequence from clone RP11-186M12 on chromosome 22, complete sequence Length = 172545 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 714 atacatgttgtattttttagct 735 |||||||||||||||||||||| Sbjct: 891 atacatgttgtattttttagct 912
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 709 tttatatacatgttgtattttt 730 |||||||||||||||||||||| Sbjct: 33419 tttatatacatgttgtattttt 33398
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 709 tttatatacatgttgtattttt 730 |||||||||||||||||||||| Sbjct: 111777 tttatatacatgttgtattttt 111756
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 44.1 bits (22), Expect = 0.81 Identities = 25/26 (96%) Strand = Plus / Minus Query: 518 gtcgtcgacggcgaacaagccgggga 543 ||||||||||||||||| |||||||| Sbjct: 65315 gtcgtcgacggcgaacacgccgggga 65290
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 Length = 340000 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 714 atacatgttgtattttttagct 735 |||||||||||||||||||||| Sbjct: 12935 atacatgttgtattttttagct 12956
>emb|AL050303.4|HS214G14 Homo sapiens chromosome 21 PAC RPCIP704G14214Q2, complete sequence Length = 166239 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Plus Query: 714 atacatgttgtattttttagct 735 |||||||||||||||||||||| Sbjct: 10635 atacatgttgtattttttagct 10656
>dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-72P4, complete sequence Length = 184770 Score = 44.1 bits (22), Expect = 0.81 Identities = 22/22 (100%) Strand = Plus / Minus Query: 714 atacatgttgtattttttagct 735 |||||||||||||||||||||| Sbjct: 91598 atacatgttgtattttttagct 91577
>dbj|AK239190.1| Sus scrofa mRNA, clone:THY010071G12, expressed in thymus Length = 2482 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gtgctgatgctctgcctccag 98 ||||||||||||||||||||| Sbjct: 355 gtgctgatgctctgcctccag 335
>gb|DQ657217.1| Ginkgo biloba class III HD-Zip protein HDZ33 mRNA, partial cds Length = 2550 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 749 gcttttatacacacagatgta 769 ||||||||||||||||||||| Sbjct: 570 gcttttatacacacagatgta 590
>gb|DQ385527.1| Ginkgo biloba class III homeodomain-leucine zipper protein C3HDZ3 (C3HDZ3) mRNA, complete cds Length = 2514 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 749 gcttttatacacacagatgta 769 ||||||||||||||||||||| Sbjct: 756 gcttttatacacacagatgta 776
>gb|AC122270.4| Mus musculus BAC clone RP23-220N16 from 17, complete sequence Length = 196395 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 tgatcaacatagaggactcat 408 ||||||||||||||||||||| Sbjct: 148833 tgatcaacatagaggactcat 148813
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 cgccgcctctcctccggcggc 140 ||||||||||||||||||||| Sbjct: 19290069 cgccgcctctcctccggcggc 19290049
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 553 aggacgatgtcgacgtgggcgccgg 577 ||||||| ||||||||||||||||| Sbjct: 248137 aggacgacgtcgacgtgggcgccgg 248161
>gb|AC011897.10| Homo sapiens BAC clone RP11-314E10 from 2, complete sequence Length = 200223 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gtgctgatgctctgcctccag 98 ||||||||||||||||||||| Sbjct: 22954 gtgctgatgctctgcctccag 22974
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cggcggcggcgagatccggct 154 ||||||||||||||||||||| Sbjct: 948960 cggcggcggcgagatccggct 948940
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 cgccgcctctcctccggcggc 140 ||||||||||||||||||||| Sbjct: 19512 cgccgcctctcctccggcggc 19492
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 cgccgcctctcctccggcggc 140 ||||||||||||||||||||| Sbjct: 63082 cgccgcctctcctccggcggc 63062 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 127,877,150 Number of extensions: 6880050 Number of successful extensions: 133695 Number of sequences better than 10.0: 25 Number of HSP's gapped: 133695 Number of HSP's successfully gapped: 25 Length of query: 850 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 828 Effective length of database: 18,508,616,841 Effective search space: 15325134744348 Effective search space used: 15325134744348 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)