ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001056470.1| Oryza sativa (japonica cultivar-group) Os03g... 488 e-134
2dbj|AK069184.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-134
3emb|CT832741.1| Oryza sativa (indica cultivar-group) cDNA clone:... 305 2e-79
4gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str... 210 7e-51
5gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 210 7e-51
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 7e-51
7gb|AY110393.1| Zea mays CL5132_1 mRNA sequence 204 4e-49
8gb|U95179.1|PAU95179 Prunus armeniaca putative NifU protein mRNA... 60 2e-05
9dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 50 0.015
10dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.93
11dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 44 0.93
12emb|X04616.2|ANPSBA1 Synechococcus sp. PCC 7942 pmg1 (partial), ... 44 0.93
13emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.93
14gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.93
15gb|AY840979.1| Bifidobacterium breve prophage-like element, comp... 44 0.93
16gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 44 0.93
17ref|XM_001032436.1| Tetrahymena thermophila SB210 Kinesin motor ... 42 3.7
18gb|CP000479.1| Mycobacterium avium 104, complete genome 42 3.7
19ref|XM_001180788.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 3.7
20ref|XM_775936.2| PREDICTED: Strongylocentrotus purpuratus simila... 42 3.7
21ref|NM_001070604.1| Oryza sativa (japonica cultivar-group) Os10g... 42 3.7
22gb|BT027946.1| Gasterosteus aculeatus clone CNB77-B05 mRNA sequence 42 3.7
23gb|BT027034.1| Gasterosteus aculeatus clone CFW156-B09 mRNA sequ... 42 3.7
24emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 3.7
25gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, co... 42 3.7
26dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 42 3.7
27gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 3.7
28gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 3.7
29gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome... 42 3.7
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
31emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chr... 42 3.7
32dbj|AK107098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
33dbj|AP004542.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 3.7
34gb|AY566569.1| Felis catus myocilin mRNA, complete cds 42 3.7
35gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 3.7

>ref|NM_001056470.1| Oryza sativa (japonica cultivar-group) Os03g0314700 (Os03g0314700)
           mRNA, complete cds
          Length = 1151
 Score =  488 bits (246), Expect = e-134
 Identities = 417/474 (87%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
           |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 253 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 312

                                                                       
Query: 319 ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
           || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 313 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 372

                                                                       
Query: 379 gaggacggcgtcgtctcccttaggcttgaaggggcgtgcagcagttgtcccagctcgacg 438
           |||||||||||| ||||||| | ||| ||||| |||||| |||| || ||||||||||||
Sbjct: 373 gaggacggcgtcatctccctcaagctcgaaggagcgtgcggcagctgccccagctcgacg 432

                                                                       
Query: 439 acgacgatgaacatgggcatcgagcgagtgctcaaggagaagttcggtgacgccatcaag 498
           ||||||||||| |||||||||||||| |||||||||||||||||||| |||||| | || 
Sbjct: 433 acgacgatgaagatgggcatcgagcgcgtgctcaaggagaagttcggcgacgccgtaaaa 492

                                                                       
Query: 499 gacatccgccaggtgttcgacggggaccagcaacccgaagagacgacgcctgaggcggtg 558
           || |||||||||||||||||||  || ||||| || |  ||| | |||||  ||||||||
Sbjct: 493 gatatccgccaggtgttcgacgacgatcagcagccggcggagccaacgccccaggcggtg 552

                                                                       
Query: 559 aaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtgtggaggtg 618
           ||| | ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 553 aacggccacctggacatactgcggccggcgatcgccaactacggcgggagcgtggaggtg 612

                                                                       
Query: 619 cttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtccatcgggagt 678
            | ||||| |||||||||||||||||||| | |||||| ||||| |||||||||||||| 
Sbjct: 613 gtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtccatcgggagc 672

                                                                 
Query: 679 ggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgttc 732
           ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 673 gggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgttc 726



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>dbj|AK069184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A17, full
           insert sequence
          Length = 1154

 Score =  488 bits (246), Expect = e-134
 Identities = 417/474 (87%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
           |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 256 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 315

                                                                       
Query: 319 ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
           || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 316 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 375

                                                                       
Query: 379 gaggacggcgtcgtctcccttaggcttgaaggggcgtgcagcagttgtcccagctcgacg 438
           |||||||||||| ||||||| | ||| ||||| |||||| |||| || ||||||||||||
Sbjct: 376 gaggacggcgtcatctccctcaagctcgaaggagcgtgcggcagctgccccagctcgacg 435

                                                                       
Query: 439 acgacgatgaacatgggcatcgagcgagtgctcaaggagaagttcggtgacgccatcaag 498
           ||||||||||| |||||||||||||| |||||||||||||||||||| |||||| | || 
Sbjct: 436 acgacgatgaagatgggcatcgagcgcgtgctcaaggagaagttcggcgacgccgtaaaa 495

                                                                       
Query: 499 gacatccgccaggtgttcgacggggaccagcaacccgaagagacgacgcctgaggcggtg 558
           || |||||||||||||||||||  || ||||| || |  ||| | |||||  ||||||||
Sbjct: 496 gatatccgccaggtgttcgacgacgatcagcagccggcggagccaacgccccaggcggtg 555

                                                                       
Query: 559 aaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtgtggaggtg 618
           ||| | ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 556 aacggccacctggacatactgcggccggcgatcgccaactacggcgggagcgtggaggtg 615

                                                                       
Query: 619 cttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtccatcgggagt 678
            | ||||| |||||||||||||||||||| | |||||| ||||| |||||||||||||| 
Sbjct: 616 gtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtccatcgggagc 675

                                                                 
Query: 679 ggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgttc 732
           ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 676 gggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgttc 729



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>emb|CT832741.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN058D24, full
           insert sequence
          Length = 957

 Score =  305 bits (154), Expect = 2e-79
 Identities = 235/262 (89%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
           |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 225 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 284

                                                                       
Query: 319 ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
           || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 285 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 344

                                                                       
Query: 379 gaggacggcgtcgtctcccttaggcttgaaggggcgtgcagcagttgtcccagctcgacg 438
           |||||||||||| ||||||| | ||| ||||| |||||| |||| || ||||||||||||
Sbjct: 345 gaggacggcgtcatctccctcaagctcgaaggagcgtgcggcagctgccccagctcgacg 404

                                                                       
Query: 439 acgacgatgaacatgggcatcgagcgagtgctcaaggagaagttcggtgacgccatcaag 498
           ||||||||||| |||||||||||||| |||||||||||||||||||| |||||| | || 
Sbjct: 405 acgacgatgaagatgggcatcgagcgcgtgctcaaggagaagttcggcgacgccgtaaaa 464

                                 
Query: 499 gacatccgccaggtgttcgacg 520
           || |||||||||||||||||||
Sbjct: 465 gatatccgccaggtgttcgacg 486



 Score =  210 bits (106), Expect = 7e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 551 aggcggtgaaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtg 610
           ||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 591 aggcggtgaacggccacctggacatactgcggccggcgatcgccaactacggcgggagcg 650

                                                                       
Query: 611 tggaggtgcttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtcca 670
           |||||||| | ||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 651 tggaggtggtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtcca 710

                                                                       
Query: 671 tcgggagtggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgt 730
           ||||||| ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 711 tcgggagcgggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgt 770

             
Query: 731 tc 732
           ||
Sbjct: 771 tc 772



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>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score =  210 bits (106), Expect = 7e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                         
Query: 551   aggcggtgaaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtg 610
             ||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 24682 aggcggtgaacggccacctggacatactgcggccggcgatcgccaactacggcgggagcg 24741

                                                                         
Query: 611   tggaggtgcttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtcca 670
             |||||||| | ||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 24742 tggaggtggtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtcca 24801

                                                                         
Query: 671   tcgggagtggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgt 730
             ||||||| ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 24802 tcgggagcgggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgt 24861

               
Query: 731   tc 732
             ||
Sbjct: 24862 tc 24863



 Score =  174 bits (88), Expect = 4e-40
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                         
Query: 259   ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
             |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 24186 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 24245

                                                                         
Query: 319   ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
             || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 24246 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 24305

                                 
Query: 379   gaggacggcgtcgtctccct 398
             |||||||||||| |||||||
Sbjct: 24306 gaggacggcgtcatctccct 24325



 Score =  137 bits (69), Expect = 8e-29
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                         
Query: 412   gcgtgcagcagttgtcccagctcgacgacgacgatgaacatgggcatcgagcgagtgctc 471
             |||||| |||| || ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 24469 gcgtgcggcagctgccccagctcgacgacgacgatgaagatgggcatcgagcgcgtgctc 24528

                                                              
Query: 472   aaggagaagttcggtgacgccatcaaggacatccgccaggtgttcgacg 520
             |||||||||||||| |||||| | || || |||||||||||||||||||
Sbjct: 24529 aaggagaagttcggcgacgccgtaaaagatatccgccaggtgttcgacg 24577



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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score =  210 bits (106), Expect = 7e-51
 Identities = 163/182 (89%)
 Strand = Plus / Minus

                                                                         
Query: 551   aggcggtgaaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtg 610
             ||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 35319 aggcggtgaacggccacctggacatactgcggccggcgatcgccaactacggcgggagcg 35260

                                                                         
Query: 611   tggaggtgcttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtcca 670
             |||||||| | ||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 35259 tggaggtggtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtcca 35200

                                                                         
Query: 671   tcgggagtggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgt 730
             ||||||| ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 35199 tcgggagcgggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgt 35140

               
Query: 731   tc 732
             ||
Sbjct: 35139 tc 35138



 Score =  174 bits (88), Expect = 4e-40
 Identities = 127/140 (90%)
 Strand = Plus / Minus

                                                                         
Query: 259   ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
             |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 35815 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 35756

                                                                         
Query: 319   ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
             || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 35755 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 35696

                                 
Query: 379   gaggacggcgtcgtctccct 398
             |||||||||||| |||||||
Sbjct: 35695 gaggacggcgtcatctccct 35676



 Score =  137 bits (69), Expect = 8e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                         
Query: 412   gcgtgcagcagttgtcccagctcgacgacgacgatgaacatgggcatcgagcgagtgctc 471
             |||||| |||| || ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 35532 gcgtgcggcagctgccccagctcgacgacgacgatgaagatgggcatcgagcgcgtgctc 35473

                                                              
Query: 472   aaggagaagttcggtgacgccatcaaggacatccgccaggtgttcgacg 520
             |||||||||||||| |||||| | || || |||||||||||||||||||
Sbjct: 35472 aaggagaagttcggcgacgccgtaaaagatatccgccaggtgttcgacg 35424



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  210 bits (106), Expect = 7e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                            
Query: 551      aggcggtgaaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagtg 610
                ||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 11242492 aggcggtgaacggccacctggacatactgcggccggcgatcgccaactacggcgggagcg 11242551

                                                                            
Query: 611      tggaggtgcttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtcca 670
                |||||||| | ||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 11242552 tggaggtggtcgccgtcgacggcgaggactgcctggtgaggtacgaaggccccgagtcca 11242611

                                                                            
Query: 671      tcgggagtggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtgt 730
                ||||||| ||  | ||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 11242612 tcgggagcgggatcaaggcggccatcaaggagaagttcccggacatcaccaatgtggtgt 11242671

                  
Query: 731      tc 732
                ||
Sbjct: 11242672 tc 11242673



 Score =  174 bits (88), Expect = 4e-40
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                            
Query: 259      ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
                |||||||| || |||||||| | ||||||||| |||||| |||| |||||||||||||||
Sbjct: 11241996 ggaggcggcctgtactcggcggagacctacgagctgacggcggagaacgtcgaccgcgtc 11242055

                                                                            
Query: 319      ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
                || |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| 
Sbjct: 11242056 ctggacgacgtgcgcccctacctcatcgccgacggcggcgacgtcaccgtcgcgtccgtc 11242115

                                    
Query: 379      gaggacggcgtcgtctccct 398
                |||||||||||| |||||||
Sbjct: 11242116 gaggacggcgtcatctccct 11242135



 Score =  137 bits (69), Expect = 8e-29
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                            
Query: 412      gcgtgcagcagttgtcccagctcgacgacgacgatgaacatgggcatcgagcgagtgctc 471
                |||||| |||| || ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 11242279 gcgtgcggcagctgccccagctcgacgacgacgatgaagatgggcatcgagcgcgtgctc 11242338

                                                                 
Query: 472      aaggagaagttcggtgacgccatcaaggacatccgccaggtgttcgacg 520
                |||||||||||||| |||||| | || || |||||||||||||||||||
Sbjct: 11242339 aaggagaagttcggcgacgccgtaaaagatatccgccaggtgttcgacg 11242387



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>gb|AY110393.1| Zea mays CL5132_1 mRNA sequence
          Length = 844

 Score =  204 bits (103), Expect = 4e-49
 Identities = 220/261 (84%)
 Strand = Plus / Minus

                                                                       
Query: 259 ggaggcgggctttactcggcagcgacctacgaactgacgccggataacgtcgaccgcgtc 318
           |||| ||| || |||||||| ||||| ||||| ||||| ||||| |||||||||||||||
Sbjct: 762 ggagncggcctctactcggcggcgacgtacgagctgaccccggaaaacgtcgaccgcgtc 703

                                                                       
Query: 319 ctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgta 378
           || |||||||| || || ||||||||||| |||     | ||||| |||||||  |||| 
Sbjct: 702 ctggacgacgtccggccgtacctcatctctgacnnnnncaacgtcaccgtcgttgccgtc 643

                                                                       
Query: 379 gaggacggcgtcgtctcccttaggcttgaaggggcgtgcagcagttgtcccagctcgacg 438
           |||||||| ||| ||||||| | ||| ||||| || ||| |||| || ||||||| ||||
Sbjct: 642 gaggacggtgtcatctccctcaagctcgaaggagcttgcggcagctgccccagcttgacg 583

                                                                       
Query: 439 acgacgatgaacatgggcatcgagcgagtgctcaaggagaagttcggtgacgccatcaag 498
           ||||||||||| |||||||||||||| |||||||||||||||||||| |||||  |||||
Sbjct: 582 acgacgatgaatatgggcatcgagcgtgtgctcaaggagaagttcggcgacgctttcaag 523

                                
Query: 499 gacatccgccaggtgttcgac 519
           || ||||| ||||||||||||
Sbjct: 522 gaaatccgtcaggtgttcgac 502



 Score =  180 bits (91), Expect = 6e-42
 Identities = 163/187 (87%)
 Strand = Plus / Minus

                                                                       
Query: 550 gaggcggtgaaccggcacctggacatactgcgtccggcgatcgcgaactacggcgggagt 609
           |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| 
Sbjct: 471 gaggcggtgaaccggcacctggacatactgcggccagcgatcgcgaactacggcgggagc 412

                                                                       
Query: 610 gtggaggtgcttgccgttgacggcgaggactgcctggttaagtacgacggcccagagtcc 669
           ||||| ||| | ||||| || ||||||||||||||||| | ||||||||| || || |||
Sbjct: 411 gtggatgtgttggccgtcgatggcgaggactgcctggtgaggtacgacgggccggaatcc 352

                                                                       
Query: 670 atcgggagtggagtgaaggcagccatcaaggagaagttccccgacatcacgaatgtggtg 729
           ||||| || ||  | ||||| |||||||||||||| ||||| |||||||| | |||||||
Sbjct: 351 atcggcagcggtatcaaggcggccatcaaggagaaattcccggacatcaccagtgtggtg 292

                  
Query: 730 ttcaccc 736
           || ||||
Sbjct: 291 tttaccc 285



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>gb|U95179.1|PAU95179 Prunus armeniaca putative NifU protein mRNA, partial cds
          Length = 636

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 331 cgcccctacctcatctccgacggcggcgacgtcgccgtcgtgtccgtagaggacggcgtc 390
           |||||||| |||||| | || ||||| ||||||| ||| |||||||| ||||||||||||
Sbjct: 43  cgcccctatctcatcgctgatggcggtgacgtcgacgttgtgtccgttgaggacggcgtc 102

             
Query: 391 gt 392
           ||
Sbjct: 103 gt 104



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 50.1 bits (25), Expect = 0.015
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                           
Query: 300     ggataacgtcgaccgcgtcctcgacgacgtgcgcccctacctcatctccgacggcggcga 359
               |||||||||||| |  |||||||||||  ||||||||||  | || |||||||||||| |
Sbjct: 3071251 ggataacgtcgagctggtcctcgacgaattgcgcccctatttgatgtccgacggcggcaa 3071192

                    
Query: 360     cgtcg 364
               |||||
Sbjct: 3071191 cgtcg 3071187



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 421     agttgtcccagctcgacgacga 442
               ||||||||||||||||||||||
Sbjct: 3863412 agttgtcccagctcgacgacga 3863391



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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 315     cgtcctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcg 364
               |||||| |||||  ||||||||||||||||  |||| |||||| ||||||
Sbjct: 1180629 cgtcctggacgagctgcgcccctacctcattgccgatggcggcaacgtcg 1180678



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>emb|X04616.2|ANPSBA1 Synechococcus sp. PCC 7942 pmg1 (partial), secG, bcsA, psbK, tgt, sys,
             end3, pur6, dpdX, dxs, leu1, sek0003, sek0005, sek0006,
             sek0007, sek0008, sek0009, sek0010, sek0011, sek0012,
             sel0013,  sek0016, sel0017, sek0018, sel0019, sek0020,
             sek0022, sek0024, sek0025, sek0026, sek0027, sel0028,
             sek0030, sek0031, sel0032, sel0033, sel0034, sel0035,
             sel0036, sel0037, sel0039, sek0041, sek0043, sek0044,
             sek0045, psba-I gene, sek0047 and sel0048 (partial) genes
          Length = 42558

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 315   cgtcctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcg 364
             |||||| |||||  ||||||||||||||||  |||| |||||| ||||||
Sbjct: 14915 cgtcctggacgagctgcgcccctacctcattgccgatggcggcaacgtcg 14964



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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 345    ctccgacggcggcgacgtcgcc 366
              ||||||||||||||||||||||
Sbjct: 317729 ctccgacggcggcgacgtcgcc 317750



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 421     agttgtcccagctcgacgacga 442
               ||||||||||||||||||||||
Sbjct: 3864086 agttgtcccagctcgacgacga 3864065



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>gb|AY840979.1| Bifidobacterium breve prophage-like element, complete sequence
          Length = 28155

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 692   ccatcaaggagaagttccccga 713
             ||||||||||||||||||||||
Sbjct: 19253 ccatcaaggagaagttccccga 19232



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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 315    cgtcctcgacgacgtgcgcccctacctcatctccgacggcggcgacgtcg 364
              |||||| |||||  ||||||||||||||||  |||| |||||| ||||||
Sbjct: 440251 cgtcctggacgagctgcgcccctacctcattgccgatggcggcaacgtcg 440202



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>ref|XM_001032436.1| Tetrahymena thermophila SB210 Kinesin motor domain containing protein
            (TTHERM_00637750) mRNA, complete cds
          Length = 4788

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 876  atggaaaatgaaatggagtaatttt 900
            |||||||||||| ||||||||||||
Sbjct: 2614 atggaaaatgaattggagtaatttt 2638



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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 347     ccgacggcggcgacgtcgccg 367
               |||||||||||||||||||||
Sbjct: 3288105 ccgacggcggcgacgtcgccg 3288125



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>ref|XM_001180788.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA
            (LOC575541), mRNA
          Length = 4755

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 343  atctccgacggcggcgacgtc 363
            |||||||||||||||||||||
Sbjct: 1545 atctccgacggcggcgacgtc 1525



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>ref|XM_775936.2| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA
            (LOC575541), mRNA
          Length = 4755

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 343  atctccgacggcggcgacgtc 363
            |||||||||||||||||||||
Sbjct: 1545 atctccgacggcggcgacgtc 1525



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>ref|NM_001070604.1| Oryza sativa (japonica cultivar-group) Os10g0123200 (Os10g0123200)
           mRNA, complete cds
          Length = 1686

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 346 tccgacggcggcgacgtcgccgtcg 370
           |||||||||||||| ||||||||||
Sbjct: 73  tccgacggcggcgaggtcgccgtcg 49



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>gb|BT027946.1| Gasterosteus aculeatus clone CNB77-B05 mRNA sequence
          Length = 1651

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 692 ccatcaaggagaagttccccg 712
           |||||||||||||||||||||
Sbjct: 233 ccatcaaggagaagttccccg 253



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>gb|BT027034.1| Gasterosteus aculeatus clone CFW156-B09 mRNA sequence
          Length = 1656

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 692 ccatcaaggagaagttccccg 712
           |||||||||||||||||||||
Sbjct: 261 ccatcaaggagaagttccccg 281



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 553     gcggtgaaccggcacctggac 573
               |||||||||||||||||||||
Sbjct: 7470688 gcggtgaaccggcacctggac 7470708



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>gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, complete sequence
          Length = 203865

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 882   aatgaaatggagtaatttttg 902
             |||||||||||||||||||||
Sbjct: 51466 aatgaaatggagtaatttttg 51486



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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 691    gccatcaaggagaagttccccgacatcac 719
              |||||||||||||||| ||| ||||||||
Sbjct: 739377 gccatcaaggagaagtacccagacatcac 739405



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 346     tccgacggcggcgacgtcgccgtcg 370
               |||||||||||||| ||||||||||
Sbjct: 1458611 tccgacggcggcgaggtcgccgtcg 1458587



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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 302    ataacgtcgaccgcgtcctcg 322
              |||||||||||||||||||||
Sbjct: 869679 ataacgtcgaccgcgtcctcg 869699



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>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0049K09, complete sequence
          Length = 154181

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 346   tccgacggcggcgacgtcgccgtcg 370
             |||||||||||||| ||||||||||
Sbjct: 71365 tccgacggcggcgaggtcgccgtcg 71341



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 346     tccgacggcggcgacgtcgccgtcg 370
               |||||||||||||| ||||||||||
Sbjct: 1458611 tccgacggcggcgaggtcgccgtcg 1458587



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>emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chromosome 1 Contains four
              novel genes, a novel gene (MGC57827), a ribosomal protein
              L22 (RPL22) pseudogene, a histone 2 H3c (HIST2H3C)
              pseudogene, the HIST2H2BB gene for histone 2 H2bb, the
              FCGR1B gene for Fc fragment of IgG high affinity Ib
              receptor for (CD64) and three CpG islands, complete
              sequence
          Length = 189539

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 842    tgtttcctttgggtagaaaaa 862
              |||||||||||||||||||||
Sbjct: 114439 tgtttcctttgggtagaaaaa 114419



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>dbj|AK107098.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H10, full
           insert sequence
          Length = 1686

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 346 tccgacggcggcgacgtcgccgtcg 370
           |||||||||||||| ||||||||||
Sbjct: 73  tccgacggcggcgaggtcgccgtcg 49



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>dbj|AP004542.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102a,
             complete sequence
          Length = 54472

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 793   tacgaaatacaacaagatttt 813
             |||||||||||||||||||||
Sbjct: 25216 tacgaaatacaacaagatttt 25196



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>gb|AY566569.1| Felis catus myocilin mRNA, complete cds
          Length = 2125

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 498 ggacatccgccaggtgttcga 518
           |||||||||||||||||||||
Sbjct: 943 ggacatccgccaggtgttcga 963



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 347     ccgacggcggcgacgtcgccg 367
               |||||||||||||||||||||
Sbjct: 1373632 ccgacggcggcgacgtcgccg 1373612


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 130,050,379
Number of extensions: 6722811
Number of successful extensions: 168550
Number of sequences better than 10.0: 35
Number of HSP's gapped: 168544
Number of HSP's successfully gapped: 43
Length of query: 978
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 955
Effective length of database: 18,503,978,556
Effective search space: 17671299520980
Effective search space used: 17671299520980
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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