ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os07g45194:12007.t04158:unspliced-genomic expressed protein 39 0.007
2LOC_Os07g45234:12007.t04162:unspliced-genomic expressed protein 38 0.013
3LOC_Os03g51670:12003.t04493:unspliced-genomic serine esteras... 34 0.32
4LOC_Os07g15050:12007.t01368:unspliced-genomic retrotransposo... 31 2.1
5LOC_Os06g03780:12006.t00269:unspliced-genomic nucleolar prot... 31 2.1
6LOC_Os06g42370:12006.t03928:unspliced-genomic retrotransposo... 30 2.9
7LOC_Os05g52070:12005.t04632:unspliced-genomic retrotransposo... 30 2.9
8LOC_Os11g40510:12011.t03592:unspliced-genomic nucleolysin TI... 26 3.6
9LOC_Os03g44840:12003.t03868:unspliced-genomic expressed protein 30 3.9
10LOC_Os01g38450:12001.t03382:unspliced-genomic hypothetical p... 30 3.9
11LOC_Os12g42900:12012.t03963:unspliced-genomic anther-specifi... 30 4.0
12LOC_Os03g22634:12003.t02013:unspliced-genomic terpene syntha... 30 4.0
13LOC_Os09g12420:12009.t01032:unspliced-genomic transposon pro... 25 4.5
14LOC_Os09g03110:12009.t00210:unspliced-genomic retrotransposo... 29 5.5
15LOC_Os06g22380:12006.t02052:unspliced-genomic expressed protein 29 5.5
16LOC_Os05g14160:12005.t01191:unspliced-genomic hypothetical p... 29 5.5
17LOC_Os01g56490:12001.t05058:unspliced-genomic ubiquitin carb... 29 5.5
18LOC_Os07g42610:12007.t03912:unspliced-genomic ring-H2 zinc f... 29 7.6
19LOC_Os03g10080:12003.t00811:unspliced-genomic expressed protein 29 7.6
20LOC_Os02g58580:12002.t05428:unspliced-genomic metal toleranc... 29 7.6
21LOC_Os02g15980:12002.t01391:unspliced-genomic expressed protein 29 7.6
22LOC_Os07g42800:12007.t03929:unspliced-genomic AT hook-contai... 24 7.9
23LOC_Os01g51990:12001.t04627:unspliced-genomic multiple stres... 24 8.8
24LOC_Os03g49050:12003.t04255:unspliced-genomic carboxy-lyase,... 25 9.4

>LOC_Os07g45194:12007.t04158:unspliced-genomic expressed protein|
          Length = 5550
 Score = 39.1 bits (79), Expect = 0.007
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1 / +1

                                           
Query: 64   PCFSVHACKCLMDHSHRLLIHQCNKIRSAVC 156
            P  S H C+CL D  HR + H+C   R A+C
Sbjct: 3037 PHLSEHLCECLPDLHHRFVRHRCRHRRHALC 3129



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>LOC_Os07g45234:12007.t04162:unspliced-genomic expressed protein|
          Length = 5952

 Score = 38.2 bits (77), Expect = 0.013
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1 / +2

                                           
Query: 64   PCFSVHACKCLMDHSHRLLIHQCNKIRSAVC 156
            P  S H C+CL D  HR   H+C   R A+C
Sbjct: 3512 PHLSEHLCECLPDLHHRFARHRCRHRRHALC 3604



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>LOC_Os03g51670:12003.t04493:unspliced-genomic serine esterase family protein, putative, expressed|
          Length = 5383

 Score = 33.6 bits (67), Expect = 0.32
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -2 / -3

                                     
Query: 75   TEAWMQERKTEKEPTSPRQTLQETY 1
            TEA  ++R+ +K+PTS  Q+LQ+TY
Sbjct: 5306 TEARKRQREGKKKPTSETQSLQDTY 5232



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>LOC_Os07g15050:12007.t01368:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2289

 Score = 30.9 bits (61), Expect = 2.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1 / +2

                                        
Query: 1   VCFL*SLSRARRFLFSFSLLHPCFSVHAC 87
           VC   S    R     FS +HPCF+ HAC
Sbjct: 803 VCQSSSCLWGRTVSLCFSYVHPCFARHAC 889



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>LOC_Os06g03780:12006.t00269:unspliced-genomic nucleolar protein 10, putative, expressed|
          Length = 7912

 Score = 30.9 bits (61), Expect = 2.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1 / -3

                                
Query: 67   CFSVHACKCLMDHSHRLLIH 126
            C S+  C CL+ H H LL+H
Sbjct: 7562 CPSLCLCLCLLSHHHHLLLH 7503



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>LOC_Os06g42370:12006.t03928:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 9484

 Score = 30.4 bits (60), Expect = 2.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1 / +2

                                                    
Query: 13   *SLSRARRFLFSFSLLHPCFSVHACKCLMDHSHRLLIHQC 132
            * L+R  RFL S +  HPC  +H          R  IH C
Sbjct: 7715 *KLARLFRFLSSTARTHPCIGIHLHVLSSPGKSRWPIHLC 7834



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>LOC_Os05g52070:12005.t04632:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 14530

 Score = 30.4 bits (60), Expect = 2.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2 / +2

                                   
Query: 38   SFSVFLSCIHASVCMHVNV*WTT 106
            SF VFL C+HAS C+ V   W +
Sbjct: 9743 SFIVFLVCLHASFCV*VCCLWVS 9811



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>LOC_Os11g40510:12011.t03592:unspliced-genomic nucleolysin TIAR, putative, expressed|
          Length = 4951

 Score = 25.8 bits (50), Expect(2) = 3.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1 / +1

                                          
Query: 73   SVHACKCLMDHSHRLLIHQCNKIRSAVCCV 162
            +VH C C    S   L H  NK    +CC+
Sbjct: 3661 TVHDCLCWQSSS*CNLSHF*NKFLFVLCCI 3750



 Score = 24.0 bits (46), Expect(2) = 3.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2 / +2

                                    
Query: 23   LGLVGSFSVFLSCIHASVCMHVNV 94
            LG     +V L  +  +VC+HVN+
Sbjct: 2711 LGTEKLLNVLLQLLFCTVCVHVNL 2782



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>LOC_Os03g44840:12003.t03868:unspliced-genomic expressed protein|
          Length = 4221

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3 / +1

                                        
Query: 116  SLWLWSIKHLHACTLKHGCKREKLKRNL 33
            S+WLW   H+H  +++  C+   LK ++
Sbjct: 2599 SMWLWQNWHIHGLSMESVCQVAPLKHSV 2682



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>LOC_Os01g38450:12001.t03382:unspliced-genomic hypothetical protein|
          Length = 1326

 Score = 29.9 bits (59), Expect = 3.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3 / -2

                           
Query: 113 LWLWSIKHLHACTLKH 66
           LWLW++ HL    LKH
Sbjct: 824 LWLWNVTHLDCSKLKH 777



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>LOC_Os12g42900:12012.t03963:unspliced-genomic anther-specific proline-rich protein APG, putative, expressed|
          Length = 1658

 Score = 29.9 bits (59), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1 / -3

                                      
Query: 46   SFSLLHPCFSVHACKCLMDHSHRLLI 123
            +F LL  CFS+H C+C    +H  LI
Sbjct: 1629 TFWLLMWCFSIHICRC*FTCNHISLI 1552



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>LOC_Os03g22634:12003.t02013:unspliced-genomic terpene synthase 7, putative, expressed|
          Length = 14687

 Score = 29.9 bits (59), Expect = 4.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1 / -1

                               
Query: 118   TACGCGPLNIYMHAH*SM 65
             T+CG GP  +Y+H H S+
Sbjct: 10994 TSCGLGPTYVYLHGHCSI 10941



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>LOC_Os09g12420:12009.t01032:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed|
          Length = 9297

 Score = 25.4 bits (49), Expect(2) = 4.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1 / -2

                                     
Query: 79   HACKCLMDHSHRLLIHQCNKIRSAV 153
            +AC   + H HR L  QC +I+  +
Sbjct: 7625 YAC*KALPHVHRFLTRQCVQIKCMI 7551



 Score = 24.9 bits (48), Expect(2) = 4.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1 / -3

                                          
Query: 4    CFL*SLSRARRFLFSFSLLHPCFSVHACKC 93
            C++ ++S AR     F  L  C+ V   KC
Sbjct: 8236 CYVDAMSHARHDFLLFPHLFTCYIVFHSKC 8147



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>LOC_Os09g03110:12009.t00210:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 10233

 Score = 29.5 bits (58), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2 / +1

                                           
Query: 2    YVSCKVCLGLVGSFSVFLSCIHASVCMHVNV 94
            Y+   +CL ++GS S++ SC +  +   + V
Sbjct: 2812 YIKILLCLSILGSCSIYYSCFNILIWSSIGV 2904



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>LOC_Os06g22380:12006.t02052:unspliced-genomic expressed protein|
          Length = 9988

 Score = 29.5 bits (58), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1 / -2

                                      
Query: 67   CFSVHACKCLMDHSHRLLIHQCNKIR 144
            C+ VH+ KCL D   R   H+C  ++
Sbjct: 2778 CYRVHSRKCLTDFGPR*QDHRCKAVQ 2701



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>LOC_Os05g14160:12005.t01191:unspliced-genomic hypothetical protein|
          Length = 6051

 Score = 29.5 bits (58), Expect = 5.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1 / -3

                             
Query: 67   CFSVHACKCLMDHSHRL 117
            CFSV +C CL  H H +
Sbjct: 5083 CFSVFSCLCLFQHIHTM 5033



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>LOC_Os01g56490:12001.t05058:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 21, putative, expressed|
          Length = 17146

 Score = 29.5 bits (58), Expect = 5.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2 / +1

                                         
Query: 17   VCLGLVGSFSVFLSCIHASVCMHVNV*WT 103
            +C+G +  FS+    IH S C +  V WT
Sbjct: 5596 LCIGSISQFSLSWLSIHWSFCCYRQVLWT 5682



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>LOC_Os07g42610:12007.t03912:unspliced-genomic ring-H2 zinc finger protein, putative, expressed|
          Length = 3984

 Score = 29.0 bits (57), Expect = 7.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1 / -3

                                   
Query: 19   LSRARRFLFSFSLLHPCFSVHAC 87
            +S  +R L   S+L PC S HAC
Sbjct: 3670 ISGIQRRLLCCSILSPCLSAHAC 3602



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>LOC_Os03g10080:12003.t00811:unspliced-genomic expressed protein|
          Length = 4716

 Score = 29.0 bits (57), Expect = 7.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1 / -1

                                                
Query: 37  FLFSFSLLHPCFSVHACKCLMDHSHRLLIHQCNKIRS 147
           FLF  +L    F  H C+  + ++H  + HQ NK+++
Sbjct: 552 FLFLEALASERFPRHRCRY*LTYAHVNIKHQLNKLKA 442



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>LOC_Os02g58580:12002.t05428:unspliced-genomic metal tolerance protein C2, putative, expressed|
          Length = 5402

 Score = 29.0 bits (57), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1 / +1

                                    
Query: 85   CKCLMDHSHRLLIHQCNKIRSAVC 156
            C CL  HS RLL+    K+  A+C
Sbjct: 4408 CSCLFCHSLRLLVISFCKLHQAMC 4479



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>LOC_Os02g15980:12002.t01391:unspliced-genomic expressed protein|
          Length = 3953

 Score = 29.0 bits (57), Expect = 7.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1 / -3

                                        
Query: 49   FSLLHPCFSVHACKCLMDHSHRLLIHQC 132
            FS +HPC     C+ L  H+     H C
Sbjct: 3429 FS*VHPCCLCSFCEALYGHASECYFHAC 3346



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>LOC_Os07g42800:12007.t03929:unspliced-genomic AT hook-containing MAR binding 1-like protein, putative, expressed|
          Length = 3192

 Score = 24.4 bits (47), Expect(2) = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2 / +1

                                
Query: 2    YVSCKVCLGLVGSFSVFLSC 61
            +V C++   LVG   VF+SC
Sbjct: 1477 FVDCRLSPKLVGGRVVFISC 1536



 Score = 23.5 bits (45), Expect(2) = 7.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1 / +2

                                         
Query: 34   RFLFSFSLLHPCFSVHACKCLMDHSHRLL 120
            R+   + L+HPC +     C+M +S  L+
Sbjct: 2582 RWSSGYHLIHPCHNHPWMYCIMTYSAYLV 2668



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>LOC_Os01g51990:12001.t04627:unspliced-genomic multiple stress-responsive zinc-finger protein ISAP1, putative|
          Length = 1846

 Score = 23.5 bits (45), Expect(2) = 8.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1 / +2

                           
Query: 160 RNTQRILFYYTDESTA 113
           RN   ILFYYT  S++
Sbjct: 734 RNANDILFYYTRTSSS 781



 Score = 23.5 bits (45), Expect(2) = 8.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / +3

                        
Query: 130  TDESTACGCGPL 95
            T++STA GC PL
Sbjct: 1176 TEDSTARGCAPL 1211



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>LOC_Os03g49050:12003.t04255:unspliced-genomic carboxy-lyase, putative|
          Length = 5538

 Score = 25.4 bits (49), Expect(2) = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1 / -2

                        
Query: 67   CFSVHACKCLMD 102
            CFSV  CKC +D
Sbjct: 5075 CFSVTKCKCKLD 5040



 Score = 23.1 bits (44), Expect(2) = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1 / -3

                          
Query: 112 RLLIHQCNKIRSAVC 156
           RL +HQC+ +   VC
Sbjct: 979 RLCLHQCHCVNVCVC 935


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 79,077,184
Number of extensions: 1010828
Number of successful extensions: 6212
Number of sequences better than 10.0: 24
Length of query: 84
Length of database: 55,613,886
Length adjustment: 45
Effective length of query: 39
Effective length of database: 53,081,376
Effective search space: 2070173664
Effective search space used: 2070173664
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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