ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111b24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001074688.1| Oryza sativa (japonica cultivar-group) Os11g0582300 (Os11g0582300) mRNA, complete cds Length = 2648 Score = 876 bits (442), Expect = 0.0 Identities = 910/1066 (85%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 164 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 223 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 224 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 283 Query: 292 ggccccagggcagcgggaaaagcaccctgctcaaccgtctcttcgggacaagcttcgccg 351 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | Sbjct: 284 ggccccagggcagcgggaaaagcaccctgctcaaccaactcttcgggacaagcttcacgg 343 Query: 352 agatggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctg 411 ||||||||||||||||||| |||| ||||| || |||||||||||| ||||||| |||| Sbjct: 344 agatggatgccttgaaagggaggagccagactaccaagggaatttggattgccaaggctg 403 Query: 412 ctggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagag 471 |||||||||||||| ||| |||| |||||||| ||||| ||||| || |||||||||| Sbjct: 404 taggcattgagccgtttactgttgtaatggatttggagggcacggacggcagggaaagag 463 Query: 472 gggaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgata 531 | ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| Sbjct: 464 gagaggatgatacagccttcgagaagcagagtgccctttttgctctggcagtatcagata 523 Query: 532 ttgtaatgataaatttgtggtgtcatgacataggccgagaacaggcggctaacaggcctc 591 |||| ||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||| Sbjct: 524 ttgttatgataaatttgtggtgtcatgatataggacgagaacatgcagctaataggcctc 583 Query: 592 ttttgaaaactatatttgaggttttgatgcgcttattcagccctcggaaaacgacactac 651 | |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || | | Sbjct: 584 tgttgaaaacaatatttgaggtattgatgcgtttattcagcccacgcaaaacaacgttgc 643 Query: 652 tgcttgtgatccgcgataaaacaaagactcccgtagagtatcttgcccaggctctaaagg 711 | ||||| || ||||||||||| |||||||| |||||||||| |||| ||||| |||| Sbjct: 644 tacttgttattcgcgataaaaccaagactccactagagtatctaacccaagctctgaagg 703 Query: 712 aggatatccataagatatgggattctgttcccaaaccagaagtcttcaagaaagctgcgc 771 |||||||||| ||||||||| || |||||| |||||||||||| | |||| ||||||| | Sbjct: 704 aggatatccagaagatatggaatgctgttcgcaaaccagaagtttacaaggaagctgcac 763 Query: 772 taagcgaattcttcaatgtggaggtcaccgctttgtcaagttatgaagataacgaagaac 831 |||| |||||||||||||||||||| || ||| |||||||||| ||||| || ||| | | Sbjct: 764 taagtgaattcttcaatgtggaggttactgctctgtcaagttacgaagagaaagaaaatc 823 Query: 832 aatttaaggagcaggttgggaaactcaggcacaagtttattcattcaatcgatcccggcg 891 ||||||||||||||||||| |||||||||| | |||||||||||||||| ||| || | Sbjct: 824 tatttaaggagcaggttgggcaactcaggcagagatttattcattcaatcgctccaggtg 883 Query: 892 gtttagcagctgatagaagaggtgtcatacctgcttcaggtttctgtattagcgcaatgc 951 || |||||||||||||||||||||| || |||||||||||||| ||| |||| ||| | | Sbjct: 884 gtctagcagctgatagaagaggtgtgattcctgcttcaggtttttgtcttagtgcactcc 943 Query: 952 atatctggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaagatcatgg 1011 | ||||||||||| ||||| ||||| ||||| || |||||||| |||||||||||||||| Sbjct: 944 agatctggaaagtaatacgggaaaacaaggatctcaaccttcccgctcacaagatcatgg 1003 Query: 1012 ttgctactgttcgttgtgaagagattgcggatgaaaaacttagatgttttatggtggatg 1071 ||||||||||||| ||||||||||||||||||||||| || ||| |||| || ||| Sbjct: 1004 ttgctactgttcggtgtgaagagattgcggatgaaaagctcagaagtttcatatctgata 1063 Query: 1072 agggttggttggagttggaggcagttgtaacatccgttccagtacaaagctttggcatga 1131 |||| ||||||||| | || ||| || || || | || ||||| | ||||||| | || Sbjct: 1064 agggctggttggagctagaaacagctgcaaattctggtctagtaccaggctttggaaaga 1123 Query: 1132 agcttaacgacattattgatttctatctattagactatgacatggaaaccatgtacttcg 1191 ||||||| | ||| ||||||| ||||||| || ||||||| ||| |||||||||| | Sbjct: 1124 agcttaatgctattcttgatttttatctatctgagtatgacacagaagccatgtactttg 1183 Query: 1192 acgaaggtgtgagaactgttaaacgccaacagttagaatctgaaat 1237 | || | ||||||||| | ||||||||||||||||||||||||||| Sbjct: 1184 atgaggatgtgagaaccgctaaacgccaacagttagaatctgaaat 1229 Score = 581 bits (293), Expect = e-162 Identities = 847/1029 (82%), Gaps = 2/1029 (0%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||| Sbjct: 1294 aaattcaaaagtgatctagaacaatcattaaggagcggtgagggatttgcagcatcagct 1353 Query: 1362 cgtcattgtgcccagtcttcatcagtggagtttgaggcgggatggagagatgcagtagtt 1421 ||| |||||| ||||| ||| | ||| ||||| || |||| ||||||||| | ||| Sbjct: 1354 cgttattgtgtgcagtcatcaatggcggaatttgatgctggattgagagatgctttggtt 1413 Query: 1422 aaacatgcagactgggatgctacaaatagcaggaacaaactgcagcagagtgtagaagtt 1481 || |||||||| ||||| | ||||| |||| ||||||| ||||| | |||||| | Sbjct: 1414 aagcatgcagagtgggacacgacaaaagttaggagcaaactggagcagcatatagaagct 1473 Query: 1482 catacagcaggtcttaggattgcaaaattggatgaactaaaagctacttatgagaagaag 1541 ||| || || | || || | ||||| ||| ||||||||| |||| ||||||||| || Sbjct: 1474 catgcaacatctgttcggggtacaaaactggctgaactaaaggctaattatgagaaaaaa 1533 Query: 1542 ctcttggatgcactttctggacctgtacaatcaattctggaaactggcgagcgagactcc 1601 ||||||||| ||||| ||||||||||||| ||||| |||||||||| || ||||| Sbjct: 1534 ctcttggatacacttgctggacctgtacagtcaatcttggaaactggtgaaaaggactct 1593 Query: 1602 tgggcatctattaggagattatataggcgtgataccgaacatgctatattggaattttca 1661 ||||||| |||||| ||| | || |||| || || ||| |||||| |||| ||| ||| Sbjct: 1594 tgggcatgtattagaagactttacaggcatgcgactgaaagtgctattttggcattctca 1653 Query: 1662 gattccctttctgagtatgaactagatcagacaact-tctgttgaaatggtcttagaatt 1720 | |||||| || |||| ||||||||| ||||||||| || || | |||||| | ||||| Sbjct: 1654 gcttccctctccgagtttgaactagaccagacaactatccgta-agatggtcatggaatt 1712 Query: 1721 aagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctgaaaacattct 1780 ||| |||||||||||| ||| |||||| |||||||| ||||| |||||| ||| |||| Sbjct: 1713 aagagaacatgcaagaagtatagtagaagagaaagctagagaagaagctgggaacgttct 1772 Query: 1781 tatccatatgaaagaaaggttttcaactgtgttgagccatgataaagatttgatgccaag 1840 || | |||||||||||||||||| ||||||||||||| |||||| |||| ||||| || Sbjct: 1773 gatgcgtatgaaagaaaggttttccactgtgttgagccgtgataaggattccatgcctag 1832 Query: 1841 gatatggacagcaaatgaagatatacatgcaatcacccgagaagcacgcttagtggcgtt 1900 || ||||| || |||||||||||||| ||||||||| ||||||||||||||| ||| || Sbjct: 1833 gacatggaaaggaaatgaagatatacgtgcaatcactagagaagcacgcttagcggcttt 1892 Query: 1901 aagacttatgtcggtaatggcagctgtacgattggacgataaacaagataaaatagatca 1960 |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 1893 aagacttatgtcggtaatggcagctgtacgtttggacgataaaccagataaaatagatcg 1952 Query: 1961 ggctctgatggtttctcttctagatggaggatcactttcctggaagaggagcatagagtt 2020 |||||| | | | ||||| ||||||||||| | ||||| ||| ||||| || || || Sbjct: 1953 ggctctaacgactgctcttttagatggaggaccgctttcacagaaaaggagtattgaatt 2012 Query: 2021 cacttccgacccacttgcttcaaccacgtggcaagaggtgtcacaaaaggatacactaat 2080 ||| || || || |||||||||| ||| ||| | ||||||||| ||||| |||| || || Sbjct: 2013 cacatctgatcctcttgcttcaagcacatgggaggaggtgtcagaaaagaatacgctgat 2072 Query: 2081 cacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacagagtatcctgt 2140 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 2073 cacaccagtgcagtgtaaatccatctggaggcaattcaatgcagagacagagtatgctgt 2132 Query: 2141 tgcacaagcaattttgatgcaggaagcacacagacgtagtaacaattggttaccacctgc 2200 |||||||||||||| ||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 2133 tgcacaagcaatttctatgcaggaagcacacagacgtagcaataattggctgccacctgc 2192 Query: 2201 gtggaccattctggttcttgcagtacttggattcaacgaatttatgtttattcttaggaa 2260 ||||| || || |||| ||| | | || | |||||||||||| || |||| ||||| Sbjct: 2193 atggactgttttgcttctcgcaattttaggttacaacgaatttatattccttctaaggaa 2252 Query: 2261 ccctgtatacattctggggctctttctcgcttttgttctatcctatgcggtatggttgca 2320 |||| |||| | ||||||||||| |||| || || |||||||||| | ||||||||| Sbjct: 2253 ccctttatatctgctggggctcttcgtcgccttcgtagtatcctatgctgcatggttgca 2312 Query: 2321 atatgacat 2329 ||||||||| Sbjct: 2313 atatgacat 2321
>dbj|AK100485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097D22, full insert sequence Length = 2649 Score = 876 bits (442), Expect = 0.0 Identities = 910/1066 (85%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 165 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 224 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 225 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 284 Query: 292 ggccccagggcagcgggaaaagcaccctgctcaaccgtctcttcgggacaagcttcgccg 351 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | Sbjct: 285 ggccccagggcagcgggaaaagcaccctgctcaaccaactcttcgggacaagcttcacgg 344 Query: 352 agatggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctg 411 ||||||||||||||||||| |||| ||||| || |||||||||||| ||||||| |||| Sbjct: 345 agatggatgccttgaaagggaggagccagactaccaagggaatttggattgccaaggctg 404 Query: 412 ctggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagag 471 |||||||||||||| ||| |||| |||||||| ||||| ||||| || |||||||||| Sbjct: 405 taggcattgagccgtttactgttgtaatggatttggagggcacggacggcagggaaagag 464 Query: 472 gggaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgata 531 | ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| Sbjct: 465 gagaggatgatacagccttcgagaagcagagtgccctttttgctctggcagtatcagata 524 Query: 532 ttgtaatgataaatttgtggtgtcatgacataggccgagaacaggcggctaacaggcctc 591 |||| ||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||| Sbjct: 525 ttgttatgataaatttgtggtgtcatgatataggacgagaacatgcagctaataggcctc 584 Query: 592 ttttgaaaactatatttgaggttttgatgcgcttattcagccctcggaaaacgacactac 651 | |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || | | Sbjct: 585 tgttgaaaacaatatttgaggtattgatgcgtttattcagcccacgcaaaacaacgttgc 644 Query: 652 tgcttgtgatccgcgataaaacaaagactcccgtagagtatcttgcccaggctctaaagg 711 | ||||| || ||||||||||| |||||||| |||||||||| |||| ||||| |||| Sbjct: 645 tacttgttattcgcgataaaaccaagactccactagagtatctaacccaagctctgaagg 704 Query: 712 aggatatccataagatatgggattctgttcccaaaccagaagtcttcaagaaagctgcgc 771 |||||||||| ||||||||| || |||||| |||||||||||| | |||| ||||||| | Sbjct: 705 aggatatccagaagatatggaatgctgttcgcaaaccagaagtttacaaggaagctgcac 764 Query: 772 taagcgaattcttcaatgtggaggtcaccgctttgtcaagttatgaagataacgaagaac 831 |||| |||||||||||||||||||| || ||| |||||||||| ||||| || ||| | | Sbjct: 765 taagtgaattcttcaatgtggaggttactgctctgtcaagttacgaagagaaagaaaatc 824 Query: 832 aatttaaggagcaggttgggaaactcaggcacaagtttattcattcaatcgatcccggcg 891 ||||||||||||||||||| |||||||||| | |||||||||||||||| ||| || | Sbjct: 825 tatttaaggagcaggttgggcaactcaggcagagatttattcattcaatcgctccaggtg 884 Query: 892 gtttagcagctgatagaagaggtgtcatacctgcttcaggtttctgtattagcgcaatgc 951 || |||||||||||||||||||||| || |||||||||||||| ||| |||| ||| | | Sbjct: 885 gtctagcagctgatagaagaggtgtgattcctgcttcaggtttttgtcttagtgcactcc 944 Query: 952 atatctggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaagatcatgg 1011 | ||||||||||| ||||| ||||| ||||| || |||||||| |||||||||||||||| Sbjct: 945 agatctggaaagtaatacgggaaaacaaggatctcaaccttcccgctcacaagatcatgg 1004 Query: 1012 ttgctactgttcgttgtgaagagattgcggatgaaaaacttagatgttttatggtggatg 1071 ||||||||||||| ||||||||||||||||||||||| || ||| |||| || ||| Sbjct: 1005 ttgctactgttcggtgtgaagagattgcggatgaaaagctcagaagtttcatatctgata 1064 Query: 1072 agggttggttggagttggaggcagttgtaacatccgttccagtacaaagctttggcatga 1131 |||| ||||||||| | || ||| || || || | || ||||| | ||||||| | || Sbjct: 1065 agggctggttggagctagaaacagctgcaaattctggtctagtaccaggctttggaaaga 1124 Query: 1132 agcttaacgacattattgatttctatctattagactatgacatggaaaccatgtacttcg 1191 ||||||| | ||| ||||||| ||||||| || ||||||| ||| |||||||||| | Sbjct: 1125 agcttaatgctattcttgatttttatctatctgagtatgacacagaagccatgtactttg 1184 Query: 1192 acgaaggtgtgagaactgttaaacgccaacagttagaatctgaaat 1237 | || | ||||||||| | ||||||||||||||||||||||||||| Sbjct: 1185 atgaggatgtgagaaccgctaaacgccaacagttagaatctgaaat 1230 Score = 581 bits (293), Expect = e-162 Identities = 847/1029 (82%), Gaps = 2/1029 (0%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||| Sbjct: 1295 aaattcaaaagtgatctagaacaatcattaaggagcggtgagggatttgcagcatcagct 1354 Query: 1362 cgtcattgtgcccagtcttcatcagtggagtttgaggcgggatggagagatgcagtagtt 1421 ||| |||||| ||||| ||| | ||| ||||| || |||| ||||||||| | ||| Sbjct: 1355 cgttattgtgtgcagtcatcaatggcggaatttgatgctggattgagagatgctttggtt 1414 Query: 1422 aaacatgcagactgggatgctacaaatagcaggaacaaactgcagcagagtgtagaagtt 1481 || |||||||| ||||| | ||||| |||| ||||||| ||||| | |||||| | Sbjct: 1415 aagcatgcagagtgggacacgacaaaagttaggagcaaactggagcagcatatagaagct 1474 Query: 1482 catacagcaggtcttaggattgcaaaattggatgaactaaaagctacttatgagaagaag 1541 ||| || || | || || | ||||| ||| ||||||||| |||| ||||||||| || Sbjct: 1475 catgcaacatctgttcggggtacaaaactggctgaactaaaggctaattatgagaaaaaa 1534 Query: 1542 ctcttggatgcactttctggacctgtacaatcaattctggaaactggcgagcgagactcc 1601 ||||||||| ||||| ||||||||||||| ||||| |||||||||| || ||||| Sbjct: 1535 ctcttggatacacttgctggacctgtacagtcaatcttggaaactggtgaaaaggactct 1594 Query: 1602 tgggcatctattaggagattatataggcgtgataccgaacatgctatattggaattttca 1661 ||||||| |||||| ||| | || |||| || || ||| |||||| |||| ||| ||| Sbjct: 1595 tgggcatgtattagaagactttacaggcatgcgactgaaagtgctattttggcattctca 1654 Query: 1662 gattccctttctgagtatgaactagatcagacaact-tctgttgaaatggtcttagaatt 1720 | |||||| || |||| ||||||||| ||||||||| || || | |||||| | ||||| Sbjct: 1655 gcttccctctccgagtttgaactagaccagacaactatccgta-agatggtcatggaatt 1713 Query: 1721 aagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctgaaaacattct 1780 ||| |||||||||||| ||| |||||| |||||||| ||||| |||||| ||| |||| Sbjct: 1714 aagagaacatgcaagaagtatagtagaagagaaagctagagaagaagctgggaacgttct 1773 Query: 1781 tatccatatgaaagaaaggttttcaactgtgttgagccatgataaagatttgatgccaag 1840 || | |||||||||||||||||| ||||||||||||| |||||| |||| ||||| || Sbjct: 1774 gatgcgtatgaaagaaaggttttccactgtgttgagccgtgataaggattccatgcctag 1833 Query: 1841 gatatggacagcaaatgaagatatacatgcaatcacccgagaagcacgcttagtggcgtt 1900 || ||||| || |||||||||||||| ||||||||| ||||||||||||||| ||| || Sbjct: 1834 gacatggaaaggaaatgaagatatacgtgcaatcactagagaagcacgcttagcggcttt 1893 Query: 1901 aagacttatgtcggtaatggcagctgtacgattggacgataaacaagataaaatagatca 1960 |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 1894 aagacttatgtcggtaatggcagctgtacgtttggacgataaaccagataaaatagatcg 1953 Query: 1961 ggctctgatggtttctcttctagatggaggatcactttcctggaagaggagcatagagtt 2020 |||||| | | | ||||| ||||||||||| | ||||| ||| ||||| || || || Sbjct: 1954 ggctctaacgactgctcttttagatggaggaccgctttcacagaaaaggagtattgaatt 2013 Query: 2021 cacttccgacccacttgcttcaaccacgtggcaagaggtgtcacaaaaggatacactaat 2080 ||| || || || |||||||||| ||| ||| | ||||||||| ||||| |||| || || Sbjct: 2014 cacatctgatcctcttgcttcaagcacatgggaggaggtgtcagaaaagaatacgctgat 2073 Query: 2081 cacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacagagtatcctgt 2140 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 2074 cacaccagtgcagtgtaaatccatctggaggcaattcaatgcagagacagagtatgctgt 2133 Query: 2141 tgcacaagcaattttgatgcaggaagcacacagacgtagtaacaattggttaccacctgc 2200 |||||||||||||| ||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 2134 tgcacaagcaatttctatgcaggaagcacacagacgtagcaataattggctgccacctgc 2193 Query: 2201 gtggaccattctggttcttgcagtacttggattcaacgaatttatgtttattcttaggaa 2260 ||||| || || |||| ||| | | || | |||||||||||| || |||| ||||| Sbjct: 2194 atggactgttttgcttctcgcaattttaggttacaacgaatttatattccttctaaggaa 2253 Query: 2261 ccctgtatacattctggggctctttctcgcttttgttctatcctatgcggtatggttgca 2320 |||| |||| | ||||||||||| |||| || || |||||||||| | ||||||||| Sbjct: 2254 ccctttatatctgctggggctcttcgtcgccttcgtagtatcctatgctgcatggttgca 2313 Query: 2321 atatgacat 2329 ||||||||| Sbjct: 2314 atatgacat 2322
>dbj|AK065661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039D02, full insert sequence Length = 2784 Score = 684 bits (345), Expect = 0.0 Identities = 642/741 (86%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 165 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 224 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 225 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 284 Query: 292 ggccccagggcagcgggaaaagcaccctgctcaaccgtctcttcgggacaagcttcgccg 351 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | Sbjct: 285 ggccccagggcagcgggaaaagcaccctgctcaaccaactcttcgggacaagcttcacgg 344 Query: 352 agatggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctg 411 ||||||||||||||||||| |||| ||||| || |||||||||||| ||||||| |||| Sbjct: 345 agatggatgccttgaaagggaggagccagactaccaagggaatttggattgccaaggctg 404 Query: 412 ctggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagag 471 |||||||||||||| ||| |||| |||||||| ||||| ||||| || |||||||||| Sbjct: 405 taggcattgagccgtttactgttgtaatggatttggagggcacggacggcagggaaagag 464 Query: 472 gggaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgata 531 | ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| Sbjct: 465 gagaggatgatacagccttcgagaagcagagtgccctttttgctctggcagtatcagata 524 Query: 532 ttgtaatgataaatttgtggtgtcatgacataggccgagaacaggcggctaacaggcctc 591 |||| ||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||| Sbjct: 525 ttgttatgataaatttgtggtgtcatgatataggacgagaacatgcagctaataggcctc 584 Query: 592 ttttgaaaactatatttgaggttttgatgcgcttattcagccctcggaaaacgacactac 651 | |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || | | Sbjct: 585 tgttgaaaacaatatttgaggtattgatgcgtttattcagcccacgcaaaacaacgttgc 644 Query: 652 tgcttgtgatccgcgataaaacaaagactcccgtagagtatcttgcccaggctctaaagg 711 | ||||| || ||||||||||| |||||||| |||||||||| |||| ||||| |||| Sbjct: 645 tacttgttattcgcgataaaaccaagactccactagagtatctaacccaagctctgaagg 704 Query: 712 aggatatccataagatatgggattctgttcccaaaccagaagtcttcaagaaagctgcgc 771 |||||||||| ||||||||| || |||||| |||||||||||| | |||| ||||||| | Sbjct: 705 aggatatccagaagatatggaatgctgttcgcaaaccagaagtttacaaggaagctgcac 764 Query: 772 taagcgaattcttcaatgtggaggtcaccgctttgtcaagttatgaagataacgaagaac 831 |||| |||||||||||||||||||| || ||| |||||||||| ||||| || ||| | | Sbjct: 765 taagtgaattcttcaatgtggaggttactgctctgtcaagttacgaagagaaagaaaatc 824 Query: 832 aatttaaggagcaggttgggaaactcaggcacaagtttattcattcaatcgatcccggcg 891 ||||||||||||||||||| |||||||||| | |||||||||||||||| ||| || | Sbjct: 825 tatttaaggagcaggttgggcaactcaggcagagatttattcattcaatcgctccaggtg 884 Query: 892 gtttagcagctgatagaagag 912 || |||||||||||||||||| Sbjct: 885 gtctagcagctgatagaagag 905 Score = 573 bits (289), Expect = e-159 Identities = 847/1029 (82%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||| Sbjct: 1203 aaattcaaaagtgatctagaacaatcattaaggagcggtgagggatttgcagcatcagct 1262 Query: 1362 cgtcattgtgcccagtcttcatcagtggagtttgaggcgggatggagagatgcagtagtt 1421 ||| |||||| ||||| ||| | ||| ||||| || |||| ||||||||| | ||| Sbjct: 1263 cgttattgtgtgcagtcatcaatggcggaatttgatgctggattgagagatgctttggtt 1322 Query: 1422 aaacatgcagactgggatgctacaaatagcaggaacaaactgcagcagagtgtagaagtt 1481 || |||||||| ||||| | ||||| |||| ||||||| ||||| | |||||| | Sbjct: 1323 aagcatgcagagtgggacacgacaaaagttaggagcaaactggagcagcatatagaagct 1382 Query: 1482 catacagcaggtcttaggattgcaaaattggatgaactaaaagctacttatgagaagaag 1541 ||| || || | || || | ||||| ||| ||||||||| |||| ||||||||| || Sbjct: 1383 catgcaacatctgttcggggtacaaaactggctgaactaaaggctaattatgagaaaaaa 1442 Query: 1542 ctcttggatgcactttctggacctgtacaatcaattctggaaactggcgagcgagactcc 1601 ||||||||| ||||| ||||||||||||| ||||| |||||||||| || ||||| Sbjct: 1443 ctcttggatacacttgctggacctgtacagtcaatcttggaaactggtgaaaaggactct 1502 Query: 1602 tgggcatctattaggagattatataggcgtgataccgaacatgctatattggaattttca 1661 ||||||| |||||| ||| | || |||| || || ||| |||||| |||| ||| ||| Sbjct: 1503 tgggcatgtattagaagactttacaggcatgcgactgaaagtgctattttggcattctca 1562 Query: 1662 gattccctttctgagtatgaactagatcagacaact-tctgttgaaatggtcttagaatt 1720 | |||||| || |||| ||||||||| ||||||||| || || | |||||| | ||||| Sbjct: 1563 gcttccctctccgagtttgaactagaccagacaactatccgta-agatggtcatggaatt 1621 Query: 1721 aagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctgaaaacattct 1780 ||| |||||||||||| ||| |||||| |||||||| ||||| |||||| ||| |||| Sbjct: 1622 aagagaacatgcaagaagtatagtagaagagaaagctagagaagaagctgggaacgttct 1681 Query: 1781 tatccatatgaaagaaaggttttcaactgtgttgagccatgataaagatttgatgccaag 1840 || | |||||||||||||||||| ||||||||||||| |||||| |||| ||||| || Sbjct: 1682 gatgcgtatgaaagaaaggttttccactgtgttgagccgtgataaggattccatgcctag 1741 Query: 1841 gatatggacagcaaatgaagatatacatgcaatcacccgagaagcacgcttagtggcgtt 1900 || ||||| || |||||||||||||| ||||||||| ||||||||||||||| ||| || Sbjct: 1742 gacatggaaaggaaatgaagatatacgtgcaatcactagagaagcacgcttagcggcttt 1801 Query: 1901 aagacttatgtcggtaatggcagctgtacgattggacgataaacaagataaaatagatca 1960 |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 1802 aagacttatgtcggtaatggcagctgtacg-ttggacgataaaccagataaaatagatcg 1860 Query: 1961 ggctctgatggtttctcttctagatggaggatcactttcctggaagaggagcatagagtt 2020 |||||| | | | ||||| ||||||||||| | ||||| ||| ||||| || || || Sbjct: 1861 ggctctaacgactgctcttttagatggaggaccgctttcacagaaaaggagtattgaatt 1920 Query: 2021 cacttccgacccacttgcttcaaccacgtggcaagaggtgtcacaaaaggatacactaat 2080 ||| || || || |||||||||| ||| ||| | ||||||||| ||||| |||| || || Sbjct: 1921 cacatctgatcctcttgcttcaagcacatgggaggaggtgtcagaaaagaatacgctgat 1980 Query: 2081 cacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacagagtatcctgt 2140 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 1981 cacaccagtgcagtgtaaatccatctggaggcaattcaatgcagagacagagtatgctgt 2040 Query: 2141 tgcacaagcaattttgatgcaggaagcacacagacgtagtaacaattggttaccacctgc 2200 |||||||||||||| ||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 2041 tgcacaagcaatttctatgcaggaagcacacagacgtagcaataattggctgccacctgc 2100 Query: 2201 gtggaccattctggttcttgcagtacttggattcaacgaatttatgtttattcttaggaa 2260 ||||| || || |||| ||| | | || | |||||||||||| || |||| ||||| Sbjct: 2101 atggactgttttgcttctcgcaattttaggttacaacgaatttatattccttctaaggaa 2160 Query: 2261 ccctgtatacattctggggctctttctcgcttttgttctatcctatgcggtatggttgca 2320 |||| |||| | ||||||||||| |||| || || |||||||||| | ||||||||| Sbjct: 2161 ccctttatatctgctggggctcttcgtcgccttcgtagtatcctatgctgcatggttgca 2220 Query: 2321 atatgacat 2329 ||||||||| Sbjct: 2221 atatgacat 2229 Score = 125 bits (63), Expect = 1e-24 Identities = 192/235 (81%) Strand = Plus / Plus Query: 1003 agatcatggttgctactgttcgttgtgaagagattgcggatgaaaaacttagatgtttta 1062 |||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||| | Sbjct: 904 agatcatggttgctactgttcggtgtgaagagattgcggatgaaaagctcagaagtttca 963 Query: 1063 tggtggatgagggttggttggagttggaggcagttgtaacatccgttccagtacaaagct 1122 | ||| |||| ||||||||| | || ||| || || || | || ||||| | ||| Sbjct: 964 tatctgataagggctggttggagctagaaacagctgcaaattctggtctagtaccaggct 1023 Query: 1123 ttggcatgaagcttaacgacattattgatttctatctattagactatgacatggaaacca 1182 |||| | ||||||||| | ||| ||||||| ||||||| || ||||||| ||| ||| Sbjct: 1024 ttggaaagaagcttaatgctattcttgatttttatctatctgagtatgacacagaagcca 1083 Query: 1183 tgtacttcgacgaaggtgtgagaactgttaaacgccaacagttagaatctgaaat 1237 ||||||| || || | ||||||||| | ||||||||||||||||||||||||||| Sbjct: 1084 tgtactttgatgaggatgtgagaaccgctaaacgccaacagttagaatctgaaat 1138
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 147 bits (74), Expect = 3e-31 Identities = 140/162 (86%) Strand = Plus / Plus Query: 843 caggttgggaaactcaggcacaagtttattcattcaatcgatcccggcggtttagcagct 902 ||||||||| |||||||||| | |||||||||||||||| ||| || ||| |||||||| Sbjct: 34040 caggttgggcaactcaggcagagatttattcattcaatcgctccaggtggtctagcagct 34099 Query: 903 gatagaagaggtgtcatacctgcttcaggtttctgtattagcgcaatgcatatctggaaa 962 |||||||||||||| || |||||||||||||| ||| |||| ||| | || ||||||||| Sbjct: 34100 gatagaagaggtgtgattcctgcttcaggtttttgtcttagtgcactccagatctggaaa 34159 Query: 963 gtgatacgagaaaataaggaccttaaccttcctgctcacaag 1004 || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 34160 gtaatacgggaaaacaaggatctcaaccttcccgctcacaag 34201 Score = 143 bits (72), Expect = 4e-30 Identities = 99/108 (91%) Strand = Plus / Plus Query: 2056 aggtgtcacaaaaggatacactaatcacaccagtgcagtgtaaatccatctggaggcaat 2115 |||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 37061 aggtgtcagaaaagaatacgctgatcacaccagtgcagtgtaaatccatctggaggcaat 37120 Query: 2116 tcaaagctgagacagagtatcctgttgcacaagcaattttgatgcagg 2163 |||| || |||||||||||| |||||||||||||||||| ||||||| Sbjct: 37121 tcaatgcagagacagagtatgctgttgcacaagcaatttctatgcagg 37168 Score = 115 bits (58), Expect = 9e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 1899 ttaagacttatgtcggtaatggcagctgtacgattggacgataaacaagataaaatagat 1958 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 36821 ttaagacttatgtcggtaatggcagctgtacgtttggacgataaaccagataaaatagat 36880 Query: 1959 caggctctgatggtttctcttctagatggaggatcactttcctggaagaggagcatagag 2018 | |||||| | | | ||||| ||||||||||| | ||||| ||| ||||| || || Sbjct: 36881 cgggctctaacgactgctcttttagatggaggaccgctttcacagaaaaggagtattgaa 36940 Query: 2019 ttcacttccgacccacttgcttcaaccacgtggcaagaggtg 2060 ||||| || || || |||||||||| ||| ||| | |||||| Sbjct: 36941 ttcacatctgatcctcttgcttcaagcacatgggaggaggtg 36982 Score = 109 bits (55), Expect = 6e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 475 aggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgatattg 534 |||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 33058 aggatgatacagccttcgagaagcagagtgccctttttgctctggcagtatcagatattg 33117 Query: 535 taatgataaatttgt 549 | ||||||||||||| Sbjct: 33118 ttatgataaatttgt 33132 Score = 103 bits (52), Expect = 4e-18 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 1542 ctcttggatgcactttctggacctgtacaatcaattctggaaactggcgagcgagactcc 1601 ||||||||| ||||| ||||||||||||| ||||| |||||||||| || ||||| Sbjct: 36254 ctcttggatacacttgctggacctgtacagtcaatcttggaaactggtgaaaaggactct 36313 Query: 1602 tgggcatctattaggagattatataggcgtgataccgaacatgctatattggaattttca 1661 ||||||| |||||| ||| | || |||| || || ||| |||||| |||| ||| ||| Sbjct: 36314 tgggcatgtattagaagactttacaggcatgcgactgaaagtgctattttggcattctca 36373 Query: 1662 gattccctttctgagtatgaactagatcagacaact-tctgttgaaatggtcttagaatt 1720 | |||||| || |||| ||||||||| ||||||||| || | | | |||||| | ||||| Sbjct: 36374 gcttccctctccgagtttgaactagaccagacaactatccg-taagatggtcatggaatt 36432 Query: 1721 aagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctgaaaacattct 1780 ||| |||||||||||| ||| |||||| |||||||| ||||| |||||| ||| |||| Sbjct: 36433 aagagaacatgcaagaagtatagtagaagagaaagctagagaagaagctgggaacgttct 36492 Query: 1781 tatccatatgaaagaaaggt 1800 || | |||||||||||||| Sbjct: 36493 gatgcgtatgaaagaaaggt 36512 Score = 97.6 bits (49), Expect = 2e-16 Identities = 61/65 (93%) Strand = Plus / Plus Query: 306 gggaaaagcaccctgctcaaccgtctcttcgggacaagcttcgccgagatggatgccttg 365 |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 32088 gggaaaagcaccctgctcaaccaactcttcgggacaagcttcacggagatggatgccttg 32147 Query: 366 aaagg 370 ||||| Sbjct: 32148 aaagg 32152 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 1797 aggttttcaactgtgttgagccatgataaagatttgatgccaaggatatggacagcaaat 1856 |||||||| ||||||||||||| |||||| |||| ||||| |||| ||||| || |||| Sbjct: 36630 aggttttccactgtgttgagccgtgataaggattccatgcctaggacatggaaaggaaat 36689 Query: 1857 gaagatatacatgcaatcacccgagaagcacgcttag 1893 |||||||||| ||||||||| ||||||||||||||| Sbjct: 36690 gaagatatacgtgcaatcactagagaagcacgcttag 36726 Score = 95.6 bits (48), Expect = 9e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 31655 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 31714 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 31715 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 31774 Query: 292 ggccccagggcagcgg 307 |||||||||||||||| Sbjct: 31775 ggccccagggcagcgg 31790 Score = 87.7 bits (44), Expect = 2e-13 Identities = 86/100 (86%) Strand = Plus / Plus Query: 378 cagaccactaagggaatttgggttgccaaagctgctggcattgagccgttcactcttgtg 437 ||||| || |||||||||||| ||||||| |||| |||||||||||||| ||| |||| Sbjct: 32305 cagactaccaagggaatttggattgccaaggctgtaggcattgagccgtttactgttgta 32364 Query: 438 atggatttagaggggacggatgggagggaaagaggggagg 477 |||||||| ||||| ||||| || ||||||||||| |||| Sbjct: 32365 atggatttggagggcacggacggcagggaaagaggagagg 32404 Score = 83.8 bits (42), Expect = 3e-12 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1003 agatcatggttgctactgttcgttgtgaagagattgcggatgaaaa 1048 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 34333 agatcatggttgctactgttcggtgtgaagagattgcggatgaaaa 34378 Score = 83.8 bits (42), Expect = 3e-12 Identities = 63/70 (90%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||| Sbjct: 35449 aaattcaaaagtgatctagaacaatcattaaggagcggtgagggatttgcagcatcagct 35508 Query: 1362 cgtcattgtg 1371 ||| |||||| Sbjct: 35509 cgttattgtg 35518 Score = 75.8 bits (38), Expect = 8e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 |||||||||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 33250 gtggtgtcatgatataggacgagaacatgcagctaataggcctctgttgaaaacaatatt 33309 Query: 608 tgaggt 613 |||||| Sbjct: 33310 tgaggt 33315 Score = 69.9 bits (35), Expect = 5e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 724 agatatgggattctgttcccaaaccagaagtcttcaagaaagctgcgctaagcgaattct 783 |||||||| || |||||| |||||||||||| | |||| ||||||| ||||| ||||||| Sbjct: 33701 agatatggaatgctgttcgcaaaccagaagtttacaaggaagctgcactaagtgaattct 33760 Query: 784 tcaatgt 790 ||||||| Sbjct: 33761 tcaatgt 33767 Score = 69.9 bits (35), Expect = 5e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1167 tatgacatggaaaccatgtacttcgacgaaggtgtgagaactgttaaacgccaacagtta 1226 ||||||| ||| |||||||||| || || | ||||||||| | |||||||||||||||| Sbjct: 34942 tatgacacagaagccatgtactttgatgaggatgtgagaaccgctaaacgccaacagtta 35001 Query: 1227 gaatctgaaat 1237 ||||||||||| Sbjct: 35002 gaatctgaaat 35012 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 2160 caggaagcacacagacgtagtaacaattggttaccacctgcgtggac 2206 |||||||||||||||||||| || |||||| | |||||||| ||||| Sbjct: 37485 caggaagcacacagacgtagcaataattggctgccacctgcatggac 37531 Score = 52.0 bits (26), Expect = 0.012 Identities = 59/70 (84%) Strand = Plus / Plus Query: 604 tatttgaggttttgatgcgcttattcagccctcggaaaacgacactactgcttgtgatcc 663 |||||||||| |||||||| ||||||||||| || ||||| || | || ||||| || | Sbjct: 33390 tatttgaggtattgatgcgtttattcagcccacgcaaaacaacgttgctacttgttattc 33449 Query: 664 gcgataaaac 673 |||||||||| Sbjct: 33450 gcgataaaac 33459 Score = 52.0 bits (26), Expect = 0.012 Identities = 62/74 (83%) Strand = Plus / Plus Query: 2256 aggaaccctgtatacattctggggctctttctcgcttttgttctatcctatgcggtatgg 2315 ||||||||| |||| | ||||||||||| |||| || || |||||||||| | |||| Sbjct: 37706 aggaaccctttatatctgctggggctcttcgtcgccttcgtagtatcctatgctgcatgg 37765 Query: 2316 ttgcaatatgacat 2329 |||||||||||||| Sbjct: 37766 ttgcaatatgacat 37779 Score = 46.1 bits (23), Expect = 0.71 Identities = 50/59 (84%) Strand = Plus / Plus Query: 789 gtggaggtcaccgctttgtcaagttatgaagataacgaagaacaatttaaggagcaggt 847 |||||||| || ||| |||||||||| ||||| || ||| | | ||||||||||||||| Sbjct: 33839 gtggaggttactgctctgtcaagttacgaagagaaagaaaatctatttaaggagcaggt 33897 Score = 44.1 bits (22), Expect = 2.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 676 agactcccgtagagtatcttgcccaggctctaaaggaggatatcca 721 ||||||| |||||||||| |||| ||||| |||||||||||||| Sbjct: 33573 agactccactagagtatctaacccaagctctgaaggaggatatcca 33618
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 147 bits (74), Expect = 3e-31 Identities = 140/162 (86%) Strand = Plus / Plus Query: 843 caggttgggaaactcaggcacaagtttattcattcaatcgatcccggcggtttagcagct 902 ||||||||| |||||||||| | |||||||||||||||| ||| || ||| |||||||| Sbjct: 21151881 caggttgggcaactcaggcagagatttattcattcaatcgctccaggtggtctagcagct 21151940 Query: 903 gatagaagaggtgtcatacctgcttcaggtttctgtattagcgcaatgcatatctggaaa 962 |||||||||||||| || |||||||||||||| ||| |||| ||| | || ||||||||| Sbjct: 21151941 gatagaagaggtgtgattcctgcttcaggtttttgtcttagtgcactccagatctggaaa 21152000 Query: 963 gtgatacgagaaaataaggaccttaaccttcctgctcacaag 1004 || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 21152001 gtaatacgggaaaacaaggatctcaaccttcccgctcacaag 21152042 Score = 143 bits (72), Expect = 4e-30 Identities = 99/108 (91%) Strand = Plus / Plus Query: 2056 aggtgtcacaaaaggatacactaatcacaccagtgcagtgtaaatccatctggaggcaat 2115 |||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 21154902 aggtgtcagaaaagaatacgctgatcacaccagtgcagtgtaaatccatctggaggcaat 21154961 Query: 2116 tcaaagctgagacagagtatcctgttgcacaagcaattttgatgcagg 2163 |||| || |||||||||||| |||||||||||||||||| ||||||| Sbjct: 21154962 tcaatgcagagacagagtatgctgttgcacaagcaatttctatgcagg 21155009 Score = 115 bits (58), Expect = 9e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 1899 ttaagacttatgtcggtaatggcagctgtacgattggacgataaacaagataaaatagat 1958 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 21154662 ttaagacttatgtcggtaatggcagctgtacgtttggacgataaaccagataaaatagat 21154721 Query: 1959 caggctctgatggtttctcttctagatggaggatcactttcctggaagaggagcatagag 2018 | |||||| | | | ||||| ||||||||||| | ||||| ||| ||||| || || Sbjct: 21154722 cgggctctaacgactgctcttttagatggaggaccgctttcacagaaaaggagtattgaa 21154781 Query: 2019 ttcacttccgacccacttgcttcaaccacgtggcaagaggtg 2060 ||||| || || || |||||||||| ||| ||| | |||||| Sbjct: 21154782 ttcacatctgatcctcttgcttcaagcacatgggaggaggtg 21154823 Score = 109 bits (55), Expect = 6e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 475 aggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgatattg 534 |||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 21150899 aggatgatacagccttcgagaagcagagtgccctttttgctctggcagtatcagatattg 21150958 Query: 535 taatgataaatttgt 549 | ||||||||||||| Sbjct: 21150959 ttatgataaatttgt 21150973 Score = 103 bits (52), Expect = 4e-18 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 1542 ctcttggatgcactttctggacctgtacaatcaattctggaaactggcgagcgagactcc 1601 ||||||||| ||||| ||||||||||||| ||||| |||||||||| || ||||| Sbjct: 21154095 ctcttggatacacttgctggacctgtacagtcaatcttggaaactggtgaaaaggactct 21154154 Query: 1602 tgggcatctattaggagattatataggcgtgataccgaacatgctatattggaattttca 1661 ||||||| |||||| ||| | || |||| || || ||| |||||| |||| ||| ||| Sbjct: 21154155 tgggcatgtattagaagactttacaggcatgcgactgaaagtgctattttggcattctca 21154214 Query: 1662 gattccctttctgagtatgaactagatcagacaact-tctgttgaaatggtcttagaatt 1720 | |||||| || |||| ||||||||| ||||||||| || | | | |||||| | ||||| Sbjct: 21154215 gcttccctctccgagtttgaactagaccagacaactatccg-taagatggtcatggaatt 21154273 Query: 1721 aagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctgaaaacattct 1780 ||| |||||||||||| ||| |||||| |||||||| ||||| |||||| ||| |||| Sbjct: 21154274 aagagaacatgcaagaagtatagtagaagagaaagctagagaagaagctgggaacgttct 21154333 Query: 1781 tatccatatgaaagaaaggt 1800 || | |||||||||||||| Sbjct: 21154334 gatgcgtatgaaagaaaggt 21154353 Score = 97.6 bits (49), Expect = 2e-16 Identities = 61/65 (93%) Strand = Plus / Plus Query: 306 gggaaaagcaccctgctcaaccgtctcttcgggacaagcttcgccgagatggatgccttg 365 |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 21149929 gggaaaagcaccctgctcaaccaactcttcgggacaagcttcacggagatggatgccttg 21149988 Query: 366 aaagg 370 ||||| Sbjct: 21149989 aaagg 21149993 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 1797 aggttttcaactgtgttgagccatgataaagatttgatgccaaggatatggacagcaaat 1856 |||||||| ||||||||||||| |||||| |||| ||||| |||| ||||| || |||| Sbjct: 21154471 aggttttccactgtgttgagccgtgataaggattccatgcctaggacatggaaaggaaat 21154530 Query: 1857 gaagatatacatgcaatcacccgagaagcacgcttag 1893 |||||||||| ||||||||| ||||||||||||||| Sbjct: 21154531 gaagatatacgtgcaatcactagagaagcacgcttag 21154567 Score = 95.6 bits (48), Expect = 9e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 21149496 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 21149555 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 21149556 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 21149615 Query: 292 ggccccagggcagcgg 307 |||||||||||||||| Sbjct: 21149616 ggccccagggcagcgg 21149631 Score = 87.7 bits (44), Expect = 2e-13 Identities = 86/100 (86%) Strand = Plus / Plus Query: 378 cagaccactaagggaatttgggttgccaaagctgctggcattgagccgttcactcttgtg 437 ||||| || |||||||||||| ||||||| |||| |||||||||||||| ||| |||| Sbjct: 21150146 cagactaccaagggaatttggattgccaaggctgtaggcattgagccgtttactgttgta 21150205 Query: 438 atggatttagaggggacggatgggagggaaagaggggagg 477 |||||||| ||||| ||||| || ||||||||||| |||| Sbjct: 21150206 atggatttggagggcacggacggcagggaaagaggagagg 21150245 Score = 83.8 bits (42), Expect = 3e-12 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1003 agatcatggttgctactgttcgttgtgaagagattgcggatgaaaa 1048 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 21152174 agatcatggttgctactgttcggtgtgaagagattgcggatgaaaa 21152219 Score = 83.8 bits (42), Expect = 3e-12 Identities = 63/70 (90%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||||| Sbjct: 21153290 aaattcaaaagtgatctagaacaatcattaaggagcggtgagggatttgcagcatcagct 21153349 Query: 1362 cgtcattgtg 1371 ||| |||||| Sbjct: 21153350 cgttattgtg 21153359 Score = 75.8 bits (38), Expect = 8e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 |||||||||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 21151091 gtggtgtcatgatataggacgagaacatgcagctaataggcctctgttgaaaacaatatt 21151150 Query: 608 tgaggt 613 |||||| Sbjct: 21151151 tgaggt 21151156 Score = 69.9 bits (35), Expect = 5e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 724 agatatgggattctgttcccaaaccagaagtcttcaagaaagctgcgctaagcgaattct 783 |||||||| || |||||| |||||||||||| | |||| ||||||| ||||| ||||||| Sbjct: 21151542 agatatggaatgctgttcgcaaaccagaagtttacaaggaagctgcactaagtgaattct 21151601 Query: 784 tcaatgt 790 ||||||| Sbjct: 21151602 tcaatgt 21151608 Score = 69.9 bits (35), Expect = 5e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1167 tatgacatggaaaccatgtacttcgacgaaggtgtgagaactgttaaacgccaacagtta 1226 ||||||| ||| |||||||||| || || | ||||||||| | |||||||||||||||| Sbjct: 21152783 tatgacacagaagccatgtactttgatgaggatgtgagaaccgctaaacgccaacagtta 21152842 Query: 1227 gaatctgaaat 1237 ||||||||||| Sbjct: 21152843 gaatctgaaat 21152853 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 2160 caggaagcacacagacgtagtaacaattggttaccacctgcgtggac 2206 |||||||||||||||||||| || |||||| | |||||||| ||||| Sbjct: 21155326 caggaagcacacagacgtagcaataattggctgccacctgcatggac 21155372 Score = 52.0 bits (26), Expect = 0.012 Identities = 59/70 (84%) Strand = Plus / Plus Query: 604 tatttgaggttttgatgcgcttattcagccctcggaaaacgacactactgcttgtgatcc 663 |||||||||| |||||||| ||||||||||| || ||||| || | || ||||| || | Sbjct: 21151231 tatttgaggtattgatgcgtttattcagcccacgcaaaacaacgttgctacttgttattc 21151290 Query: 664 gcgataaaac 673 |||||||||| Sbjct: 21151291 gcgataaaac 21151300 Score = 52.0 bits (26), Expect = 0.012 Identities = 62/74 (83%) Strand = Plus / Plus Query: 2256 aggaaccctgtatacattctggggctctttctcgcttttgttctatcctatgcggtatgg 2315 ||||||||| |||| | ||||||||||| |||| || || |||||||||| | |||| Sbjct: 21155547 aggaaccctttatatctgctggggctcttcgtcgccttcgtagtatcctatgctgcatgg 21155606 Query: 2316 ttgcaatatgacat 2329 |||||||||||||| Sbjct: 21155607 ttgcaatatgacat 21155620 Score = 46.1 bits (23), Expect = 0.71 Identities = 50/59 (84%) Strand = Plus / Plus Query: 789 gtggaggtcaccgctttgtcaagttatgaagataacgaagaacaatttaaggagcaggt 847 |||||||| || ||| |||||||||| ||||| || ||| | | ||||||||||||||| Sbjct: 21151680 gtggaggttactgctctgtcaagttacgaagagaaagaaaatctatttaaggagcaggt 21151738 Score = 44.1 bits (22), Expect = 2.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 676 agactcccgtagagtatcttgcccaggctctaaaggaggatatcca 721 ||||||| |||||||||| |||| ||||| |||||||||||||| Sbjct: 21151414 agactccactagagtatctaacccaagctctgaaggaggatatcca 21151459
>ref|NM_001049923.1| Oryza sativa (japonica cultivar-group) Os01g0575000 (Os01g0575000) mRNA, complete cds Length = 2990 Score = 103 bits (52), Expect = 4e-18 Identities = 178/220 (80%) Strand = Plus / Plus Query: 428 cactcttgtgatggatttagaggggacggatgggagggaaagaggggaggatgatacagc 487 ||||||||| |||||||| || || |||||||| | || || || |||||||| ||||| Sbjct: 431 cactcttgtaatggatttggaaggcacggatggtcgagagaggggagaggatgacacagc 490 Query: 488 ctttgagaagcagagtgccctttttgctcttgcagtttctgatattgtaatgataaattt 547 |||||| ||||| ||||| || |||||| | || ||||| |||||||| |||| ||| | Sbjct: 491 ctttgaaaagcaaagtgcactgtttgctttggctgtttcagatattgtgttgatcaatat 550 Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 ||||||||||||||| || |||||||||| || |||| ||||||||||| ||| | || Sbjct: 551 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 610 Query: 608 tgaggttttgatgcgcttattcagccctcggaaaacgaca 647 ||||| ||||| | || ||||| || || ||||||||| Sbjct: 611 ccaggttatgatgagattgttcagtccacgtaaaacgaca 650
>dbj|AK101859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069P18, full insert sequence Length = 2988 Score = 103 bits (52), Expect = 4e-18 Identities = 178/220 (80%) Strand = Plus / Plus Query: 428 cactcttgtgatggatttagaggggacggatgggagggaaagaggggaggatgatacagc 487 ||||||||| |||||||| || || |||||||| | || || || |||||||| ||||| Sbjct: 392 cactcttgtaatggatttggaaggcacggatggtcgagagaggggagaggatgacacagc 451 Query: 488 ctttgagaagcagagtgccctttttgctcttgcagtttctgatattgtaatgataaattt 547 |||||| ||||| ||||| || |||||| | || ||||| |||||||| |||| ||| | Sbjct: 452 ctttgaaaagcaaagtgcactgtttgctttggctgtttcagatattgtgttgatcaatat 511 Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 ||||||||||||||| || |||||||||| || |||| ||||||||||| ||| | || Sbjct: 512 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 571 Query: 608 tgaggttttgatgcgcttattcagccctcggaaaacgaca 647 ||||| ||||| | || ||||| || || ||||||||| Sbjct: 572 ccaggttatgatgagattgttcagtccacgtaaaacgaca 611
>dbj|AK070726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059E17, full insert sequence Length = 2994 Score = 103 bits (52), Expect = 4e-18 Identities = 178/220 (80%) Strand = Plus / Plus Query: 428 cactcttgtgatggatttagaggggacggatgggagggaaagaggggaggatgatacagc 487 ||||||||| |||||||| || || |||||||| | || || || |||||||| ||||| Sbjct: 435 cactcttgtaatggatttggaaggcacggatggtcgagagaggggagaggatgacacagc 494 Query: 488 ctttgagaagcagagtgccctttttgctcttgcagtttctgatattgtaatgataaattt 547 |||||| ||||| ||||| || |||||| | || ||||| |||||||| |||| ||| | Sbjct: 495 ctttgaaaagcaaagtgcactgtttgctttggctgtttcagatattgtgttgatcaatat 554 Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 ||||||||||||||| || |||||||||| || |||| ||||||||||| ||| | || Sbjct: 555 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 614 Query: 608 tgaggttttgatgcgcttattcagccctcggaaaacgaca 647 ||||| ||||| | || ||||| || || ||||||||| Sbjct: 615 ccaggttatgatgagattgttcagtccacgtaaaacgaca 654
>ref|NM_112241.3| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE 3) (RHD3) mRNA, complete cds Length = 2910 Score = 99.6 bits (50), Expect = 6e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 354 atggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctgct 413 |||||||| || | ||||||| |||||| ||||||||||||||| |||| | | ||| Sbjct: 344 atggatgcatttagaggaaggtctcagacgactaagggaatttggattgctagatgcgct 403 Query: 414 ggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggg 473 || |||||||| | ||| ||||||||||||||||||| || |||||||| || | || Sbjct: 404 ggtattgagccttgcaccgttgtgatggatttagagggtaccgatgggagagagcgtggt 463 Query: 474 gaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagt 523 ||||||||||| || || ||||| |||||||| |||||||| |||||||| Sbjct: 464 gaggatgatactgctttcgagaaacagagtgctctttttgcacttgcagt 513 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 2069 atcacacctgtgcagtgtaaatcactgtggaggcaatt 2106
>gb|AY128801.1| Arabidopsis thaliana unknown protein (At3g13870) mRNA, complete cds Length = 2538 Score = 99.6 bits (50), Expect = 6e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 354 atggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctgct 413 |||||||| || | ||||||| |||||| ||||||||||||||| |||| | | ||| Sbjct: 193 atggatgcatttagaggaaggtctcagacgactaagggaatttggattgctagatgcgct 252 Query: 414 ggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggg 473 || |||||||| | ||| ||||||||||||||||||| || |||||||| || | || Sbjct: 253 ggtattgagccttgcaccgttgtgatggatttagagggtaccgatgggagagagcgtggt 312 Query: 474 gaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagt 523 ||||||||||| || || ||||| |||||||| |||||||| |||||||| Sbjct: 313 gaggatgatactgctttcgagaaacagagtgctctttttgcacttgcagt 362 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 1918 atcacacctgtgcagtgtaaatcactgtggaggcaatt 1955
>gb|AY092988.1| Arabidopsis thaliana unknown protein (At3g13870) mRNA, complete cds Length = 2829 Score = 99.6 bits (50), Expect = 6e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 354 atggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagctgct 413 |||||||| || | ||||||| |||||| ||||||||||||||| |||| | | ||| Sbjct: 283 atggatgcatttagaggaaggtctcagacgactaagggaatttggattgctagatgcgct 342 Query: 414 ggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggg 473 || |||||||| | ||| ||||||||||||||||||| || |||||||| || | || Sbjct: 343 ggtattgagccttgcaccgttgtgatggatttagagggtaccgatgggagagagcgtggt 402 Query: 474 gaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagt 523 ||||||||||| || || ||||| |||||||| |||||||| |||||||| Sbjct: 403 gaggatgatactgctttcgagaaacagagtgctctttttgcacttgcagt 452 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 2008 atcacacctgtgcagtgtaaatcactgtggaggcaatt 2045
>gb|AY105402.1| Zea mays PCO129431 mRNA sequence Length = 733 Score = 99.6 bits (50), Expect = 6e-17 Identities = 149/182 (81%) Strand = Plus / Plus Query: 417 attgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggggag 476 ||||| |||| ||| ||||| |||||||| || || || ||||| ||||| || || ||| Sbjct: 404 attgaaccgtgcacccttgtaatggatttggaaggaactgatggaagggagaggggagag 463 Query: 477 gatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgatattgta 536 ||||| ||||| ||||||||||| ||||| | |||||| | || ||||| || ||||| Sbjct: 464 gatgacacagcatttgagaagcaaagtgcattgtttgctttggccgtttcagacattgtg 523 Query: 537 atgataaatttgtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttg 596 |||| ||| |||||||||||||||| || |||||||||| || |||| |||||||||| Sbjct: 524 ttgattaatatgtggtgtcatgacattggtagagaacaggctgcaaacaagcctcttttg 583 Query: 597 aa 598 || Sbjct: 584 aa 585
>emb|CT832456.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208K19, full insert sequence Length = 2808 Score = 95.6 bits (48), Expect = 9e-16 Identities = 177/220 (80%) Strand = Plus / Plus Query: 428 cactcttgtgatggatttagaggggacggatgggagggaaagaggggaggatgatacagc 487 ||||||||| |||||||| || || |||||||| | || || || |||||||| ||||| Sbjct: 384 cactcttgtaatggatttggaaggcacggatggtcgagagaggggagaggatgacacagc 443 Query: 488 ctttgagaagcagagtgccctttttgctcttgcagtttctgatattgtaatgataaattt 547 |||||| ||||| ||||| || ||||| | || ||||| |||||||| |||| ||| | Sbjct: 444 ctttgaaaagcaaagtgcactgtttgccttggctgtttcagatattgtgttgatcaatat 503 Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaaaactatatt 607 ||||||||||||||| || |||||||||| || |||| ||||||||||| ||| | || Sbjct: 504 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaagactgtttt 563 Query: 608 tgaggttttgatgcgcttattcagccctcggaaaacgaca 647 ||||| ||||| | || ||||| || || ||||||||| Sbjct: 564 ccaggttatgatgagattgttcagtccacgtaaaacgaca 603
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 95.6 bits (48), Expect = 9e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 151811 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 151870 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 151871 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 151930 Query: 292 ggccccagggcagcgg 307 |||||||||||||||| Sbjct: 151931 ggccccagggcagcgg 151946 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gggaaaagcaccctgctcaacc 327 |||||||||||||||||||||| Sbjct: 152244 gggaaaagcaccctgctcaacc 152265
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 95.6 bits (48), Expect = 9e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 172 gccacacggcgcaggtggtgggcgctgacggagagatggacggccccgttctggagcggt 231 ||||| |||||||||||||||| || ||||| ||||||||||| | ||| ||||| Sbjct: 151811 gccacgcggcgcaggtggtgggggcggacggggagatggacggggaggcgatggcgcggt 151870 Query: 232 ttgcggcagcggcggggctcgtgcagcgcggcctctcctacgccgtcgtctccatctttg 291 | ||||| | |||||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 151871 tcgcggcgggggcggggctcctgggccgtggcctctcctacgccgtcgtctccatcgtcg 151930 Query: 292 ggccccagggcagcgg 307 |||||||||||||||| Sbjct: 151931 ggccccagggcagcgg 151946 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gggaaaagcaccctgctcaacc 327 |||||||||||||||||||||| Sbjct: 152244 gggaaaagcaccctgctcaacc 152265
>ref|NM_202579.1| Arabidopsis thaliana RHD3 (ROOT HAIR DEFECTIVE 3) (RHD3) mRNA, complete cds Length = 2914 Score = 93.7 bits (47), Expect = 3e-15 Identities = 122/147 (82%) Strand = Plus / Plus Query: 377 tcagaccactaagggaatttgggttgccaaagctgctggcattgagccgttcactcttgt 436 |||||| ||||||||||||||| |||| | | ||||| |||||||| | ||| |||| Sbjct: 371 tcagacgactaagggaatttggattgctagatgcgctggtattgagccttgcaccgttgt 430 Query: 437 gatggatttagaggggacggatgggagggaaagaggggaggatgatacagcctttgagaa 496 ||||||||||||||| || |||||||| || | || ||||||||||| || || ||||| Sbjct: 431 gatggatttagagggtaccgatgggagagagcgtggtgaggatgatactgctttcgagaa 490 Query: 497 gcagagtgccctttttgctcttgcagt 523 |||||||| |||||||| |||||||| Sbjct: 491 acagagtgctctttttgcacttgcagt 517 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 2073 atcacacctgtgcagtgtaaatcactgtggaggcaatt 2110
>gb|AY557340.2| Triticum aestivum root hair defective 3 GTP-binding protein (wrsi2) mRNA, complete cds Length = 2800 Score = 93.7 bits (47), Expect = 3e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 432 cttgtgatggatttagaggggacggatgggagggaaagaggggaggatgatacagccttt 491 ||||| |||||||| || || || ||||| || || || || |||||||| || |||||| Sbjct: 381 cttgtaatggatttggaaggcactgatggaagagagaggggagaggatgacacggccttt 440 Query: 492 gagaagcagagtgccctttttgctcttgcagtttctgatattgtaatgataaatttgtgg 551 |||||||||||||| | |||||| | || ||||| |||||||| |||| ||| ||||| Sbjct: 441 gagaagcagagtgcattatttgctttggctgtttcggatattgtgttgatcaatatgtgg 500 Query: 552 tgtcatgacataggccgagaacaggcggctaacaggcctcttttgaa 598 || ||||| || ||| |||||||||| || |||| |||||||||||| Sbjct: 501 tgccatgatattggcagagaacaggctgcgaacaagcctcttttgaa 547 Score = 44.1 bits (22), Expect = 2.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 981 gaccttaaccttcctgctcacaagatcatggttgctactgttcgttgtgaagagattg 1038 |||||| |||| |||||||| || | ||||| |||||||| ||||||||||| |||| Sbjct: 930 gaccttgacctacctgctcataaagttatggtggctactgtgcgttgtgaagaaattg 987
>ref|NM_105954.1| Arabidopsis thaliana nucleotide binding (AT1G72960) mRNA, complete cds Length = 2367 Score = 79.8 bits (40), Expect = 5e-11 Identities = 199/252 (78%) Strand = Plus / Plus Query: 351 gagatggatgccttgaaaggaaggaatcagaccactaagggaatttgggttgccaaagct 410 ||||||||||| || || |||||| ||||||||| || || || ||| |||| | | | Sbjct: 184 gagatggatgcattcaagggaaggtctcagaccacaaaaggtatctggcttgcaagatgt 243 Query: 411 gctggcattgagccgttcactcttgtgatggatttagaggggacggatgggagggaaaga 470 || || || ||||| | ||| ||||| |||||||||||||| || ||||| || || || Sbjct: 244 gccggtatagagccttgcacccttgtaatggatttagagggcaccgatggcagagagcga 303 Query: 471 ggggaggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgat 530 || ||||||||||| || || || || |||||||| ||||| |||||||| | |||||| Sbjct: 304 ggagaggatgatacggcattcgaaaaacagagtgctcttttcgctcttgctatctctgat 363 Query: 531 attgtaatgataaatttgtggtgtcatgacataggccgagaacaggcggctaacaggcct 590 || || |||| || |||||||||| ||||| ||||| ||||| || ||||| | ||| Sbjct: 364 atcgtcttgatcaacatgtggtgtcacgacattggccgtgaacaagctgctaataaacct 423 Query: 591 cttttgaaaact 602 || ||||||||| Sbjct: 424 ctcttgaaaact 435
>ref|NM_001073750.1| Oryza sativa (japonica cultivar-group) Os12g0604600 (Os12g0604600) mRNA, complete cds Length = 3085 Score = 77.8 bits (39), Expect = 2e-10 Identities = 72/83 (86%) Strand = Plus / Plus Query: 957 tggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaagatcatggttgct 1016 |||||||| |||||||| |||||||| ||| |||| |||||||||||| | ||||||||| Sbjct: 1005 tggaaagttatacgagagaataaggatcttgacctacctgctcacaaggtaatggttgct 1064 Query: 1017 actgttcgttgtgaagagattgc 1039 || ||||| ||||| || ||||| Sbjct: 1065 acagttcgatgtgatgaaattgc 1087 Score = 65.9 bits (33), Expect = 8e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 259 gcggcctctcctacgccgtcgtctccatctttgggccccagggcagcgg 307 ||||||||||||||||||||||||||||| | || |||||| ||||||| Sbjct: 307 gcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcgg 355 Score = 65.9 bits (33), Expect = 8e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 418 ttgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggggagg 477 ||||||||| ||| ||||||||||||| ||||| || ||||| || |||||||| |||| Sbjct: 466 ttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagagg 525 Query: 478 atgatacagcctttgagaagcagagtgccctttttgctcttgcagtttc 526 | || || || ||||||||||| ||| | | |||||||||||| |||| Sbjct: 526 acgacactgcatttgagaagcaaagttcgttgtttgctcttgcaatttc 574
>dbj|AK070939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069K05, full insert sequence Length = 3086 Score = 77.8 bits (39), Expect = 2e-10 Identities = 72/83 (86%) Strand = Plus / Plus Query: 957 tggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaagatcatggttgct 1016 |||||||| |||||||| |||||||| ||| |||| |||||||||||| | ||||||||| Sbjct: 1006 tggaaagttatacgagagaataaggatcttgacctacctgctcacaaggtaatggttgct 1065 Query: 1017 actgttcgttgtgaagagattgc 1039 || ||||| ||||| || ||||| Sbjct: 1066 acagttcgatgtgatgaaattgc 1088 Score = 65.9 bits (33), Expect = 8e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 259 gcggcctctcctacgccgtcgtctccatctttgggccccagggcagcgg 307 ||||||||||||||||||||||||||||| | || |||||| ||||||| Sbjct: 308 gcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcgg 356 Score = 65.9 bits (33), Expect = 8e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 418 ttgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggggagg 477 ||||||||| ||| ||||||||||||| ||||| || ||||| || |||||||| |||| Sbjct: 467 ttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagagg 526 Query: 478 atgatacagcctttgagaagcagagtgccctttttgctcttgcagtttc 526 | || || || ||||||||||| ||| | | |||||||||||| |||| Sbjct: 527 acgacactgcatttgagaagcaaagttcgttgtttgctcttgcaatttc 575
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 75.8 bits (38), Expect = 8e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 2071 atacactaatcacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacag 2130 ||||||| ||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 83240 atacactgatcacaccagtgcagtgtaaatccatctggagg------aacgcagagactg 83187 Query: 2131 agtatcctgttgcacaagcaattttgatgcagg 2163 ||||| |||||||| ||||||||| ||||||| Sbjct: 83186 agtatgctgttgcagaagcaatttctatgcagg 83154 Score = 73.8 bits (37), Expect = 3e-09 Identities = 67/77 (87%) Strand = Plus / Minus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||| |||| ||| ||||| || | | ||||||||||||||||| Sbjct: 84852 aaattcaaaagcgatctagaccaatcattaaggagcggcgggggatttgcagcatcagct 84793 Query: 1362 cgtcattgtgcccagtc 1378 ||| ||||||| ||||| Sbjct: 84792 cgttattgtgcgcagtc 84776 Score = 60.0 bits (30), Expect = 5e-05 Identities = 138/174 (79%) Strand = Plus / Minus Query: 1597 actcctgggcatctattaggagattatataggcgtgataccgaacatgctatattggaat 1656 |||| ||||||| |||||| ||| | ||||||| || || ||| ||||||| |||| || Sbjct: 83981 actcttgggcatgtattagaagactttataggcatgcaactgaaaatgctattttggcat 83922 Query: 1657 tttcagattccctttctgagtatgaactagatcagacaacttctgttgaaatggtcttag 1716 | |||| |||||| ||||||| ||||||||| |||| |||| | | |||||| | Sbjct: 83921 tctcagcttccctctctgagtttgaactagaccagataactatccataagatggtcaagg 83862 Query: 1717 aattaagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctg 1770 ||||||| |||||||||||| ||| |||||| |||||||| || || |||||| Sbjct: 83861 aattaagagaacatgcaagaagtatagtagaagagaaagctagaaaagaagctg 83808 Score = 48.1 bits (24), Expect = 0.18 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 2159 gcaggaagcacacagacgtagtaacaattggttaccacctgcgtggaccattctggttct 2218 |||||||||||||| || ||| || |||||| | |||| ||||||||| ||||| |||| Sbjct: 82860 gcaggaagcacacaaacatagcaataattggctgccac-tgcgtggactattctacttct 82802 Query: 2219 tgcagtacttggattcaacgaatttatgtttattct 2254 |||| | | || | |||||||||||||||| |||| Sbjct: 82801 tgcaattttaggttacaacgaatttatgtttcttct 82766
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 75.8 bits (38), Expect = 8e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 2071 atacactaatcacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacag 2130 ||||||| ||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 104431 atacactgatcacaccagtgcagtgtaaatccatctggagg------aacgcagagactg 104484 Query: 2131 agtatcctgttgcacaagcaattttgatgcagg 2163 ||||| |||||||| ||||||||| ||||||| Sbjct: 104485 agtatgctgttgcagaagcaatttctatgcagg 104517 Score = 73.8 bits (37), Expect = 3e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||| |||| ||| ||||| || | | ||||||||||||||||| Sbjct: 102819 aaattcaaaagcgatctagaccaatcattaaggagcggcgggggatttgcagcatcagct 102878 Query: 1362 cgtcattgtgcccagtc 1378 ||| ||||||| ||||| Sbjct: 102879 cgttattgtgcgcagtc 102895 Score = 60.0 bits (30), Expect = 5e-05 Identities = 138/174 (79%) Strand = Plus / Plus Query: 1597 actcctgggcatctattaggagattatataggcgtgataccgaacatgctatattggaat 1656 |||| ||||||| |||||| ||| | ||||||| || || ||| ||||||| |||| || Sbjct: 103690 actcttgggcatgtattagaagactttataggcatgcaactgaaaatgctattttggcat 103749 Query: 1657 tttcagattccctttctgagtatgaactagatcagacaacttctgttgaaatggtcttag 1716 | |||| |||||| ||||||| ||||||||| |||| |||| | | |||||| | Sbjct: 103750 tctcagcttccctctctgagtttgaactagaccagataactatccataagatggtcaagg 103809 Query: 1717 aattaagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctg 1770 ||||||| |||||||||||| ||| |||||| |||||||| || || |||||| Sbjct: 103810 aattaagagaacatgcaagaagtatagtagaagagaaagctagaaaagaagctg 103863 Score = 48.1 bits (24), Expect = 0.18 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2159 gcaggaagcacacagacgtagtaacaattggttaccacctgcgtggaccattctggttct 2218 |||||||||||||| || ||| || |||||| | |||| ||||||||| ||||| |||| Sbjct: 104811 gcaggaagcacacaaacatagcaataattggctgccac-tgcgtggactattctacttct 104869 Query: 2219 tgcagtacttggattcaacgaatttatgtttattct 2254 |||| | | || | |||||||||||||||| |||| Sbjct: 104870 tgcaattttaggttacaacgaatttatgtttcttct 104905
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 75.8 bits (38), Expect = 8e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 2071 atacactaatcacaccagtgcagtgtaaatccatctggaggcaattcaaagctgagacag 2130 ||||||| ||||||||||||||||||||||||||||||||| || || ||||| | Sbjct: 29012558 atacactgatcacaccagtgcagtgtaaatccatctggagg------aacgcagagactg 29012611 Query: 2131 agtatcctgttgcacaagcaattttgatgcagg 2163 ||||| |||||||| ||||||||| ||||||| Sbjct: 29012612 agtatgctgttgcagaagcaatttctatgcagg 29012644 Score = 73.8 bits (37), Expect = 3e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 1302 aaattcaaaaacgatctagaacaattattgaggagtggtgagagatttgcagcatcagct 1361 |||||||||| ||||||||| |||| ||| ||||| || | | ||||||||||||||||| Sbjct: 29010946 aaattcaaaagcgatctagaccaatcattaaggagcggcgggggatttgcagcatcagct 29011005 Query: 1362 cgtcattgtgcccagtc 1378 ||| ||||||| ||||| Sbjct: 29011006 cgttattgtgcgcagtc 29011022 Score = 60.0 bits (30), Expect = 5e-05 Identities = 138/174 (79%) Strand = Plus / Plus Query: 1597 actcctgggcatctattaggagattatataggcgtgataccgaacatgctatattggaat 1656 |||| ||||||| |||||| ||| | ||||||| || || ||| ||||||| |||| || Sbjct: 29011817 actcttgggcatgtattagaagactttataggcatgcaactgaaaatgctattttggcat 29011876 Query: 1657 tttcagattccctttctgagtatgaactagatcagacaacttctgttgaaatggtcttag 1716 | |||| |||||| ||||||| ||||||||| |||| |||| | | |||||| | Sbjct: 29011877 tctcagcttccctctctgagtttgaactagaccagataactatccataagatggtcaagg 29011936 Query: 1717 aattaagggaacatgcaagatgtacagtagagaagaaagctcgagaacaagctg 1770 ||||||| |||||||||||| ||| |||||| |||||||| || || |||||| Sbjct: 29011937 aattaagagaacatgcaagaagtatagtagaagagaaagctagaaaagaagctg 29011990 Score = 48.1 bits (24), Expect = 0.18 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2159 gcaggaagcacacagacgtagtaacaattggttaccacctgcgtggaccattctggttct 2218 |||||||||||||| || ||| || |||||| | |||| ||||||||| ||||| |||| Sbjct: 29012938 gcaggaagcacacaaacatagcaataattggctgccac-tgcgtggactattctacttct 29012996 Query: 2219 tgcagtacttggattcaacgaatttatgtttattct 2254 |||| | | || | |||||||||||||||| |||| Sbjct: 29012997 tgcaattttaggttacaacgaatttatgtttcttct 29013032
>ref|NM_123884.2| Arabidopsis thaliana ATP binding / GTP binding (AT5G45160) mRNA, complete cds Length = 2753 Score = 65.9 bits (33), Expect = 8e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 988 accttcctgctcacaagatcatggttgctactgttcgttgtgaagagat 1036 ||||||||||||||||| | |||||||| |||||||| ||||||||||| Sbjct: 836 accttcctgctcacaaggtaatggttgccactgttcggtgtgaagagat 884
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 65.9 bits (33), Expect = 8e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 259 gcggcctctcctacgccgtcgtctccatctttgggccccagggcagcgg 307 ||||||||||||||||||||||||||||| | || |||||| ||||||| Sbjct: 25542526 gcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcgg 25542574 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 957 tggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaag 1004 |||||||| |||||||| |||||||| ||| |||| |||||||||||| Sbjct: 25545546 tggaaagttatacgagagaataaggatcttgacctacctgctcacaag 25545593 Score = 48.1 bits (24), Expect = 0.18 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 ttgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggggagg 477 ||||||||| ||| ||||||||||||| ||||| || ||||| || |||||||| |||| Sbjct: 25543860 ttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagagg 25543919
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 65.9 bits (33), Expect = 8e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 259 gcggcctctcctacgccgtcgtctccatctttgggccccagggcagcgg 307 ||||||||||||||||||||||||||||| | || |||||| ||||||| Sbjct: 111908 gcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcgg 111956 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 957 tggaaagtgatacgagaaaataaggaccttaaccttcctgctcacaag 1004 |||||||| |||||||| |||||||| ||| |||| |||||||||||| Sbjct: 114928 tggaaagttatacgagagaataaggatcttgacctacctgctcacaag 114975 Score = 48.1 bits (24), Expect = 0.18 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 ttgagccgttcactcttgtgatggatttagaggggacggatgggagggaaagaggggagg 477 ||||||||| ||| ||||||||||||| ||||| || ||||| || |||||||| |||| Sbjct: 113242 ttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagagg 113301
>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4 Length = 38810 Score = 61.9 bits (31), Expect = 1e-05 Identities = 73/87 (83%) Strand = Plus / Minus Query: 377 tcagaccactaagggaatttgggttgccaaagctgctggcattgagccgttcactcttgt 436 |||||| ||||||||||||||| |||| | | ||||| |||||||| | ||| |||| Sbjct: 34273 tcagacgactaagggaatttggattgctagatgcgctggtattgagccttgcaccgttgt 34214 Query: 437 gatggatttagaggggacggatgggag 463 ||||||||||||||| || |||||||| Sbjct: 34213 gatggatttagagggtaccgatgggag 34187 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 30802 atcacacctgtgcagtgtaaatcactgtggaggcaatt 30765
>gb|U86081.1|ATU86081 Arabidopsis thaliana root hair defective 3 (RHD3) gene, complete cds Length = 5741 Score = 61.9 bits (31), Expect = 1e-05 Identities = 73/87 (83%) Strand = Plus / Plus Query: 377 tcagaccactaagggaatttgggttgccaaagctgctggcattgagccgttcactcttgt 436 |||||| ||||||||||||||| |||| | | ||||| |||||||| | ||| |||| Sbjct: 1226 tcagacgactaagggaatttggattgctagatgcgctggtattgagccttgcaccgttgt 1285 Query: 437 gatggatttagaggggacggatgggag 463 ||||||||||||||| || |||||||| Sbjct: 1286 gatggatttagagggtaccgatgggag 1312 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 4697 atcacacctgtgcagtgtaaatcactgtggaggcaatt 4734
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.046 Identities = 52/61 (85%) Strand = Plus / Plus Query: 475 aggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgatattg 534 ||||||| ||||||||||| ||||| ||||| || |||||| | || ||||| ||||||| Sbjct: 22119152 aggatgacacagcctttgaaaagcaaagtgcactgtttgctttggctgtttcagatattg 22119211 Query: 535 t 535 | Sbjct: 22119212 t 22119212 Score = 46.1 bits (23), Expect = 0.71 Identities = 44/51 (86%) Strand = Plus / Plus Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaa 598 ||||||||||||||| || |||||||||| || |||| ||||||||||| Sbjct: 22119314 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaa 22119364
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 50.1 bits (25), Expect = 0.046 Identities = 52/61 (85%) Strand = Plus / Plus Query: 475 aggatgatacagcctttgagaagcagagtgccctttttgctcttgcagtttctgatattg 534 ||||||| ||||||||||| ||||| ||||| || |||||| | || ||||| ||||||| Sbjct: 14638 aggatgacacagcctttgaaaagcaaagtgcactgtttgctttggctgtttcagatattg 14697 Query: 535 t 535 | Sbjct: 14698 t 14698 Score = 46.1 bits (23), Expect = 0.71 Identities = 44/51 (86%) Strand = Plus / Plus Query: 548 gtggtgtcatgacataggccgagaacaggcggctaacaggcctcttttgaa 598 ||||||||||||||| || |||||||||| || |||| ||||||||||| Sbjct: 14800 gtggtgtcatgacattggtagagaacaggctgcgaacaaacctcttttgaa 14850
>emb|AL136325.6| Human DNA sequence from clone RP5-983F16 on chromosome 1p21.3-22.2 Contains a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a CpG island, complete sequence Length = 133052 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1655 attttcagattccctttctgagt 1677 ||||||||||||||||||||||| Sbjct: 118850 attttcagattccctttctgagt 118872
>emb|AL121931.10|HS1131C10 Human DNA sequence from clone RP5-1131C10 on chromosome 6q12-13, complete sequence Length = 133751 Score = 46.1 bits (23), Expect = 0.71 Identities = 26/27 (96%) Strand = Plus / Minus Query: 447 gaggggacggatgggagggaaagaggg 473 |||||||| |||||||||||||||||| Sbjct: 96601 gaggggacagatgggagggaaagaggg 96575
>dbj|AK230324.1| Arabidopsis thaliana mRNA for root hair defective 3, partial cds, clone: RAFL24-16-C18 Length = 2101 Score = 44.1 bits (22), Expect = 2.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2079 atcacaccagtgcagtgtaaatccatctggaggcaatt 2116 |||||||| |||||||||||||| | ||||||||||| Sbjct: 1268 atcacacctgtgcagtgtaaatcactgtggaggcaatt 1305
>ref|XM_968810.1| PREDICTED: Tribolium castaneum similar to CG18255-PA, isoform A (LOC662729), mRNA Length = 17037 Score = 44.1 bits (22), Expect = 2.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1745 agagaagaaagctcgagaacaagctgaaaa 1774 ||||||||||||| ||||| |||||||||| Sbjct: 13749 agagaagaaagctagagaagaagctgaaaa 13778
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2841 tactactacttctgtttcataatgta 2866 ||||||||| |||||||||||||||| Sbjct: 48985 tactactacctctgtttcataatgta 48960
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 ggcagcgggaaaagcaccctgctcaa 325 ||||||||||||||||||||| |||| Sbjct: 1679014 ggcagcgggaaaagcaccctgatcaa 1679039
>emb|CR974434.12| Pig DNA sequence from clone CH242-241E19 on chromosome 7, complete sequence Length = 186072 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2655 acatatggtatagtatatatta 2676 |||||||||||||||||||||| Sbjct: 15414 acatatggtatagtatatatta 15435
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2841 tactactacttctgtttcataatgta 2866 ||||||||| |||||||||||||||| Sbjct: 18651109 tactactacctctgtttcataatgta 18651084 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 514,519,886 Number of extensions: 28030906 Number of successful extensions: 154394 Number of sequences better than 10.0: 38 Number of HSP's gapped: 154380 Number of HSP's successfully gapped: 127 Length of query: 2901 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2878 Effective length of database: 18,503,978,556 Effective search space: 53254450284168 Effective search space used: 53254450284168 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
