ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf108d19 |
|---|---|
| Clone Library Name | barley_pub |
>Q2TBG8:UCHL3_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L3 - Bos taurus| (Bovine) Length = 230 Score = 95.9 bits (237), Expect(2) = 6e-35 Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 2/134 (1%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXX 267 G+RW PLE++PEV NQF+ LG+ +F DVYG+D + L+MVP+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEK 61 Query: 268 XXXXXXXQV--LATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGL 441 + + ++ +D VYF+KQ ++ NACGTI L+HA+ N ++ S L Sbjct: 62 YEVFRTEEEEKIKSQGQDVTSSVYFMKQ--TISNACGTIGLIHAIANNKDKMHFESGSTL 119 Query: 442 DLFFKSTASMDPYE 483 F + +ASM P E Sbjct: 120 KKFLEESASMSPEE 133 Score = 73.2 bits (178), Expect(2) = 6e-35 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEE---HYVCFTALSGALYELDGMKSGPIKL 746 RAR LE D + H +A G TE +I E+ H++ + G LYELDG K PI Sbjct: 134 RARYLENYDAIRVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINH 193 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+DA+ V K M R P+ + FN + LS Sbjct: 194 GETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>Q06AB3:UCHL3_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L3 - Sus scrofa (Pig)| Length = 230 Score = 95.5 bits (236), Expect(2) = 7e-35 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXX 267 G+RW PLE++PEV NQF+ LG+ +F DVYG+D + L+MVP+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEK 61 Query: 268 XXXXXXXQV--LATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGL 441 + + ++ +D VYF+KQ ++ NACGTI L+HA+ N +++ S L Sbjct: 62 YEVFRTEEEEKIKSQGQDVTPSVYFMKQ--TISNACGTIGLIHAIANNKNKMHFESGSTL 119 Query: 442 DLFFKSTASMDPYE 483 F + +ASM P E Sbjct: 120 KKFLEESASMSPDE 133 Score = 73.2 bits (178), Expect(2) = 7e-35 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEE---HYVCFTALSGALYELDGMKSGPIKL 746 RAR LE D + H +A G TE +I E+ H++ + G LYELDG K PI Sbjct: 134 RARYLESYDAIPVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINH 193 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+DA+ V K M R P+ + FN + LS Sbjct: 194 GETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>P15374:UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3 - Homo sapiens| (Human) Length = 230 Score = 94.4 bits (233), Expect(2) = 2e-34 Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXX 267 G+RW PLE++PEV NQF+ LG+ +F DVYG+D + L+MVP+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEK 61 Query: 268 XXXXXXXQV--LATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGL 441 + + ++ +D VYF+KQ ++ NACGTI L+HA+ N ++ S L Sbjct: 62 YEVFRTEEEEKIKSQGQDVTSSVYFMKQ--TISNACGTIGLIHAIANNKDKMHFESGSTL 119 Query: 442 DLFFKSTASMDPYE 483 F + + SM P E Sbjct: 120 KKFLEESVSMSPEE 133 Score = 73.2 bits (178), Expect(2) = 2e-34 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTE---IGDIVEEHYVCFTALSGALYELDGMKSGPIKL 746 RAR LE D + H +A G TE I + V+ H++ + G LYELDG K PI Sbjct: 134 RARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINH 193 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+DA+ V K M R P+ + FN + LS Sbjct: 194 GETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>Q9JKB1:UCHL3_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L3 - Mus musculus| (Mouse) Length = 230 Score = 92.8 bits (229), Expect(2) = 1e-33 Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXX 267 G+RW PLE++PEV NQF+ LG+ +F DVYG++ + L+MVP+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEK 61 Query: 268 XXXXXXXQV--LATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGL 441 + + ++ +D VYF+KQ ++ NACGTI L+HA+ N ++ S L Sbjct: 62 YEVFRTEEEEKIKSQGQDVTSSVYFMKQ--TISNACGTIGLIHAIANNKDKMHFESGSTL 119 Query: 442 DLFFKSTASMDPYE 483 F + + SM P E Sbjct: 120 KKFLEESVSMSPEE 133 Score = 72.0 bits (175), Expect(2) = 1e-33 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTE---IGDIVEEHYVCFTALSGALYELDGMKSGPIKL 746 RA+ LE D + H +A G TE I + V+ H++ + G LYELDG K PI Sbjct: 134 RAKFLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINH 193 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+DA+ V K M R P+ + FN + LS Sbjct: 194 GKTSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>Q91Y78:UCHL3_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L3 - Rattus| norvegicus (Rat) Length = 230 Score = 92.4 bits (228), Expect(2) = 1e-33 Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXX 267 G+RW PLE++PEV NQF+ LG+ +F DVYG++ + L+MVP+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEK 61 Query: 268 XXXXXXXQV--LATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGL 441 + + ++ +D VYF+KQ ++ NACGTI L+HA+ N ++ S L Sbjct: 62 YEVFRTEEEEKIKSQGQDVTSSVYFMKQ--TISNACGTIGLIHAIANNKDKMHFESGSAL 119 Query: 442 DLFFKSTASMDPYE 483 F + + +M P E Sbjct: 120 KKFLEESVAMSPEE 133 Score = 72.4 bits (176), Expect(2) = 1e-33 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTE---IGDIVEEHYVCFTALSGALYELDGMKSGPIKL 746 RAR LE D + H +A G TE I + V+ H++ + G LYELDG K PI Sbjct: 134 RARHLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINH 193 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+DA+ V K M R P+ + FN + LS Sbjct: 194 GKTSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>P58321:UCHL4_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L4 - Mus musculus| (Mouse) Length = 233 Score = 88.2 bits (217), Expect(2) = 9e-32 Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 5/137 (3%) Frame = +1 Query: 88 GERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCF--XXX 261 G+RW PLE++PEV NQF+ LG+ +F DVYG++S+ L+++P+PV AV+ F Sbjct: 3 GQRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMESELLSIIPRPVCAVLLLFPITEK 61 Query: 262 XXXXXXXXXQVLATEDKDAWDQVYFIKQVESLGNAC---GTIALLHAVGNAHSEISLLEN 432 + + ++ +D VYF+KQ ++ NAC GTI L+HA+ N ++ Sbjct: 62 YEVFRTEEEEKIKSQGQDVTSSVYFMKQ--TISNACGTIGTIGLIHAIANNKDKVHFESG 119 Query: 433 SGLDLFFKSTASMDPYE 483 S L F + + SM P E Sbjct: 120 STLKKFLEESVSMSPEE 136 Score = 70.1 bits (170), Expect(2) = 9e-32 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 3/95 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTE---IGDIVEEHYVCFTALSGALYELDGMKSGPIKL 746 RA+ LE D + H +A G TE I + V+ H++ + G LYELDG K PI Sbjct: 137 RAKYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINH 196 Query: 747 GSSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 G +S E+LL+D + V K M R P+ + FN + LS Sbjct: 197 GKTSDETLLEDVIKVCKKFMERDPDELRFNAIALS 231
>O01391:UCHL_APLCA Ubiquitin carboxyl-terminal hydrolase - Aplysia californica| (California sea hare) Length = 214 Score = 85.1 bits (209), Expect(2) = 1e-28 Identities = 47/131 (35%), Positives = 74/131 (56%) Frame = +1 Query: 91 ERWPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXX 270 +RW PLES+P+V N+++ +LG+ G F DV+GLD + LAMVP+P A++ F Sbjct: 5 QRWIPLESNPKVLNKYVHNLGMDAGW-NFVDVFGLDPELLAMVPRPAAALVLLFPDDKET 63 Query: 271 XXXXXXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLF 450 Q++ D D +Y+ KQ ++GNACGT+A++HA+ N + I F Sbjct: 64 VN----QLIGEYQSDYPDSLYYTKQ--TIGNACGTVAIVHALANNENVIPFDAAKHFKTF 117 Query: 451 FKSTASMDPYE 483 + T ++P E Sbjct: 118 LEKTKPLNPEE 128 Score = 62.8 bits (151), Expect(2) = 1e-28 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 3/84 (3%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEI---GDIVEEHYVCFTALSGALYELDGMKSGPIKL 746 RA+ LE+++ M AH A GDT+ + V+ H+V +G LYELDG K P+ Sbjct: 129 RAKHLEQDNLMGAAHGDCAQEGDTQAPSQDEHVKSHFVALVHCNGTLYELDGRKEAPVVH 188 Query: 747 GSSSPESLLQDAVHVIKAMMHRIP 818 G++S ++ L+DA V+K M R P Sbjct: 189 GTTSADTFLEDAAEVVKKFMARDP 212
>Q00981:UCHL1_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Rattus| norvegicus (Rat) Length = 223 Score = 78.2 bits (191), Expect(2) = 2e-28 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ + L VP P A++ F Sbjct: 5 PMEINPEMLNKVLAKLGVA-GQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 + P Sbjct: 122 EKLSP 126 Score = 69.3 bits (168), Expect(2) = 2e-28 Identities = 35/94 (37%), Positives = 50/94 (53%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S +SLLQDA V + R V F+ + L ++ Sbjct: 189 SEDSLLQDAAKVCREFTEREQGEVRFSAVALCKA 222
>Q9R0P9:UCHL1_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Mus musculus| (Mouse) Length = 223 Score = 78.2 bits (191), Expect(2) = 2e-28 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ + L VP P A++ F Sbjct: 5 PMEINPEMLNKVLAKLGVA-GQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 + P Sbjct: 122 EKLSP 126 Score = 69.3 bits (168), Expect(2) = 2e-28 Identities = 35/94 (37%), Positives = 50/94 (53%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S +SLLQDA V + R V F+ + L ++ Sbjct: 189 SEDSLLQDAAKVCREFTEREQGEVRFSAVALCKA 222
>Q60HC8:UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 223 Score = 80.1 bits (196), Expect(2) = 2e-28 Identities = 44/125 (35%), Positives = 67/125 (53%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ D+L VP P A++ F Sbjct: 5 PMEINPEMLNKVLSRLGVA-GQWRFVDVLGLEEDSLGSVPAPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 M P Sbjct: 122 EKMSP 126 Score = 67.0 bits (162), Expect(2) = 2e-28 Identities = 34/94 (36%), Positives = 49/94 (52%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S +LLQDA V + R V F+ + L ++ Sbjct: 189 SEGTLLQDAAKVCREFTEREQGEVRFSAVALCKA 222
>Q6SEG5:UCHL1_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Sus scrofa (Pig)| Length = 223 Score = 77.4 bits (189), Expect(2) = 2e-28 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G F DV GL+ ++L VP P A++ F Sbjct: 5 PMEINPEMLNKVLTRLGVA-GHWRFADVLGLEEESLGSVPAPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 + P Sbjct: 122 EKLSP 126 Score = 69.7 bits (169), Expect(2) = 2e-28 Identities = 35/94 (37%), Positives = 50/94 (53%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S +SLLQDA V + R V F+ + L ++ Sbjct: 189 SEDSLLQDAAKVCREFTEREQGEVRFSAVALCKA 222
>P09936:UCHL1_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Homo sapiens| (Human) Length = 223 Score = 78.6 bits (192), Expect(2) = 6e-28 Identities = 43/125 (34%), Positives = 67/125 (53%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ ++L VP P A++ F Sbjct: 5 PMEINPEMLNKVLSRLGVA-GQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 M P Sbjct: 122 EKMSP 126 Score = 67.0 bits (162), Expect(2) = 6e-28 Identities = 33/94 (35%), Positives = 50/94 (53%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S ++LL+DA V + R V F+ + L ++ Sbjct: 189 SEDTLLKDAAKVCREFTEREQGEVRFSAVALCKA 222
>Q9GM50:UCHL1_HORSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Equus caballus| (Horse) Length = 223 Score = 77.0 bits (188), Expect(2) = 1e-27 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ + L VP P A++ F Sbjct: 5 PMEINPEMLNKVLARLGVA-GQWRFVDVLGLEEETLGSVPAPACALLLLFPLTAQHENFR 63 Query: 283 XXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDLFFKST 462 Q+ + ++ +VYF+KQ ++GN+CGTI L+HAV N ++ + S L F T Sbjct: 64 KKQIEELKGQEVSPKVYFMKQ--TIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121 Query: 463 ASMDP 477 + P Sbjct: 122 EKLSP 126 Score = 67.4 bits (163), Expect(2) = 1e-27 Identities = 34/94 (36%), Positives = 49/94 (52%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 129 RAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGAS 188 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S + LLQDA V + R V F+ + L ++ Sbjct: 189 SEDLLLQDAAKVCREFTEREQGEVRFSAVALCKA 222
>P35122:UCHL_DROME Ubiquitin carboxyl-terminal hydrolase - Drosophila melanogaster| (Fruit fly) Length = 227 Score = 68.9 bits (167), Expect(2) = 2e-24 Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 2/94 (2%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIG--DIVEEHYVCFTALSGALYELDGMKSGPIKLG 749 R R LEK++ H A G T + V H++ G LYELDG KS PIK G Sbjct: 130 RGRALEKDEKFTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHG 189 Query: 750 SSSPESLLQDAVHVIKAMMHRIPNSVNFNVMVLS 851 +S E+ ++DA V K M R PN V F V+ L+ Sbjct: 190 PTSEETFVKDAAKVCKEFMARDPNEVRFTVLALT 223 Score = 65.1 bits (157), Expect(2) = 2e-24 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 3/132 (2%) Frame = +1 Query: 97 WPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIF---CFXXXXX 267 W PLES+PEV +++ LGV + DV GL+ D L +P+PV A I C Sbjct: 4 WTPLESNPEVLTKYIHKLGVSPAWS-VTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62 Query: 268 XXXXXXXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLENSGLDL 447 ++ E++ D +++++Q NACGT+AL+H+V N + E+ ++ L Sbjct: 63 HRAEEHDRIKEVEEQHPED-LFYMRQFTH--NACGTVALIHSVAN-NKEVD-IDRGVLKD 117 Query: 448 FFKSTASMDPYE 483 F + TAS+ P E Sbjct: 118 FLEKTASLSPEE 129
>P23356:UCHL1_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L1 - Bos taurus| (Bovine) Length = 252 Score = 69.7 bits (169), Expect(2) = 3e-24 Identities = 35/94 (37%), Positives = 50/94 (53%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSS 755 RA+ EKN+ + AH A G + D V H++ F + G LYELDG P+ G+S Sbjct: 158 RAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGTS 217 Query: 756 SPESLLQDAVHVIKAMMHRIPNSVNFNVMVLSRS 857 S +SLLQDA V + R V F+ + L ++ Sbjct: 218 SEDSLLQDAAKVCREFTEREQGEVRFSAVALCKA 251 Score = 63.5 bits (153), Expect(2) = 3e-24 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 29/154 (18%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXXXX 282 P+E +PE+ N+ + LGV G+ F DV GL+ ++L VP P A++ F Sbjct: 5 PMEINPEMLNKVLTRLGVA-GQWRFEDVLGLEEESLGSVPAPACALLLLFPLTAQRCFKL 63 Query: 283 XX-----------------------------QVLATEDKDAWDQVYFIKQVESLGNACGT 375 Q+ + ++ +VYF+KQ ++GN+CGT Sbjct: 64 GREAASRFHHPDYPGRLFILLVSQHENFRKKQIEELKGQEVSPKVYFMKQ--TIGNSCGT 121 Query: 376 IALLHAVGNAHSEISLLENSGLDLFFKSTASMDP 477 I L+HAV N ++ + S L F T + P Sbjct: 122 IGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSP 155
>P35127:UBL1_YEAST Ubiquitin carboxyl-terminal hydrolase YUH1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 236 Score = 62.4 bits (150), Expect = 3e-09 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Frame = +1 Query: 103 PLESSPEVFNQFMWSLGVPRGEAEFHDVYGL-DSDALAMVPQPVLAVIFCFXXXXXXXXX 279 P+ES+PEVF F LG+ + E + D+Y L + + LA +P+PV A++ F Sbjct: 10 PIESNPEVFTNFAHKLGL-KNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFPINEDRKSS 68 Query: 280 XXXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLE-NSGLDLFFK 456 Q+ ++ D V + KQ S+ NACG A+LH++ N SLLE S LD F K Sbjct: 69 TSQQITSSYD------VIWFKQ--SVKNACGLYAILHSLSNNQ---SLLEPGSDLDNFLK 117 Query: 457 S 459 S Sbjct: 118 S 118 Score = 33.5 bits (75), Expect = 1.5 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = +3 Query: 633 SAGDTEIGDIVEE---HYVCFTALSGALYELDGMK-SGPIKLGSSSP 761 S G +E + + HY+ + +G ++ELDG SGP+ LG S P Sbjct: 150 STGQSEAPEATADTNLHYITYVEENGGIFELDGRNLSGPLYLGKSDP 196
>Q10171:UBLH1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 222 Score = 57.0 bits (136), Expect = 1e-07 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Frame = +1 Query: 97 WPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXX 276 W PLE++PEV ++ +GV +A D++ L+ + +P+PV A++F F Sbjct: 2 WRPLENTPEVLEPYLQKIGVQ--DASVFDLFSLE-EIPEYIPRPVHALLFVFPSSGTKTI 58 Query: 277 XXXXQVLATE-DKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISLLEN 432 ++L + DK W +++ NACGTI LLHAV N + EN Sbjct: 59 YKGSRILPKDSDKVLW-------YPQTIPNACGTIGLLHAVSNGELRRKVNEN 104 Score = 32.0 bits (71), Expect = 4.3 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Frame = +3 Query: 576 RARVLEKNDDMARAHSLAASAGDTEIGDIVEE------HYVCFTALSGA----LYELDGM 725 RA+++E + ++ H AA AG + EE H++CF YELDG Sbjct: 122 RAKLIEDSKELEALH--AAFAGPPLEVEGSEEDVETDLHFICFVKGKSKDDNHFYELDGR 179 Query: 726 KSGPIKLGSSSPESLLQDAVHVIKAMMHRI 815 + GP++ + L + + VIK + I Sbjct: 180 QEGPVQHSEIESDLLNAEVLSVIKNYIQSI 209
>Q9UUB6:UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 - Schizosaccharomyces pombe| (Fission yeast) Length = 300 Score = 52.8 bits (125), Expect = 2e-06 Identities = 37/109 (33%), Positives = 51/109 (46%) Frame = +1 Query: 97 WPPLESSPEVFNQFMWSLGVPRGEAEFHDVYGLDSDALAMVPQPVLAVIFCFXXXXXXXX 276 W +ES VF + +LGV + E ++Y LD D+L P + +IF F Sbjct: 3 WTTIESDAGVFTDLIENLGVK--DVEVDELYSLDVDSLRQFPD-IYGIIFLFKWNSKVDK 59 Query: 277 XXXXQVLATEDKDAWDQVYFIKQVESLGNACGTIALLHAVGNAHSEISL 423 T D D+ D ++F KQV + NAC T ALL + N EI L Sbjct: 60 PD-----GTMDYDSMDNIFFAKQV--INNACATQALLSVLLNHSDEIDL 101 Score = 50.4 bits (119), Expect = 1e-05 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRI-PNSVNFNVMVL 848 H++ +T ++ YELDG+++ PI GS + E + AV VI+A + P + FN+MV+ Sbjct: 159 HFIAYTNINNVFYELDGLQAAPINHGSCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVI 218 Query: 849 SRSPK 863 + K Sbjct: 219 CKDKK 223
>Q06AT3:UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 - Sus scrofa (Pig)| Length = 329 Score = 42.7 bits (99), Expect = 0.002 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRI-PNSVNFNVMVL 848 H+V + ++G LYELDG++ GPI LG+ + + + VI+ + + + FN+M + Sbjct: 164 HFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAI 223
>Q9Y5K5:UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 - Homo sapiens| (Human) Length = 329 Score = 42.7 bits (99), Expect = 0.002 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRI-PNSVNFNVMVL 848 H+V + ++G LYELDG++ GPI LG+ + + + VI+ + + + FN+M + Sbjct: 164 HFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAI 223
>Q9XSJ0:UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 - Bos taurus| (Bovine) Length = 328 Score = 42.7 bits (99), Expect = 0.002 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRI-PNSVNFNVMVL 848 H+V + ++G LYELDG++ GPI LG+ + + + VI+ + + + FN+M + Sbjct: 164 HFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAI 223
>Q9WUP7:UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 - Mus musculus| (Mouse) Length = 329 Score = 42.4 bits (98), Expect = 0.003 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRI-PNSVNFNVMVL 848 H+V + ++G LYELDG++ GPI LG+ + + + VI+ + + + FN+M + Sbjct: 164 HFVSYVPVNGRLYELDGLREGPIDLGACNQDDWITAVRPVIEKRIQKYSEGEIRFNLMAI 223
>Q09444:UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4 -| Caenorhabditis elegans Length = 321 Score = 32.7 bits (73), Expect = 2.5 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHR-----IPNSVNFN 836 H+V + + +YELDG++ P+++ E QD + IK ++ + + FN Sbjct: 158 HFVTYVPIGNKVYELDGLRELPLEVAEFQKE---QDWIEAIKPVIQQRMQKYSEGEITFN 214 Query: 837 VMVL 848 +M L Sbjct: 215 LMAL 218
>Q09PK2:APRV1_MOUSE Retroviral-like aspartic protease 1 precursor - Mus musculus| (Mouse) Length = 339 Score = 32.0 bits (71), Expect = 4.3 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 502 KPVILTLVTLTRFCVILFILCHTFSVPECWRRMMT 606 +P + +++ T FC L++ C T +PE RRM T Sbjct: 52 EPSLSSVIAPTLFCAFLYLACVTAELPEVSRRMAT 86
>O82246:Y2778_ARATH REF/SRPP-like protein At2g47780 - Arabidopsis thaliana (Mouse-ear| cress) Length = 235 Score = 31.2 bits (69), Expect = 7.4 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = +3 Query: 585 VLEKNDDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGSSSPE 764 V+E +D+M H + ++ V F A LYEL +GP+KLG + E Sbjct: 32 VVEDDDEMKLKHL-----------EFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIE 80 Query: 765 SLLQDAVHVIKAMMHRIP 818 ++ + + H +P Sbjct: 81 DCVRTVLAPLYEKFHDVP 98
>Q99PU7:BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 - Mus musculus (Mouse)| Length = 728 Score = 31.2 bits (69), Expect = 7.4 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRIP--------NSV 827 H+V + ++G L+ELDG+K PI G + D + +M RI + + Sbjct: 169 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKAR--RVIMERIGLATAGEPYHDI 226 Query: 828 NFNVMVL 848 FN+M + Sbjct: 227 RFNLMAV 233
>Q92560:BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 - Homo sapiens (Human)| Length = 729 Score = 31.2 bits (69), Expect = 7.4 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Frame = +3 Query: 672 HYVCFTALSGALYELDGMKSGPIKLGSSSPESLLQDAVHVIKAMMHRIP--------NSV 827 H+V + ++G L+ELDG+K PI G + D + +M RI + + Sbjct: 169 HFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKAR--RVIMERIGLATAGEPYHDI 226 Query: 828 NFNVMVL 848 FN+M + Sbjct: 227 RFNLMAV 233
>Q2YDI9:FTMT_BOVIN Ferritin, mitochondrial precursor - Bos taurus (Bovine)| Length = 242 Score = 30.8 bits (68), Expect = 9.6 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = +3 Query: 579 ARVLEKN--DDMARAHSLAASAGDTEIGDIVEEHYVCFTALSGALYELDGMKSGPIKLGS 752 A +LEKN + H+LA+ GD + D +E HY+ S + EL + +K+G Sbjct: 163 ALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVKS--IKELGDHVNNLVKMG- 219 Query: 753 SSPESLLQD 779 +PES L + Sbjct: 220 -APESGLAE 227
>Q9IA00:BIC1A_XENLA Protein bicaudal C homolog 1-A - Xenopus laevis (African clawed| frog) Length = 963 Score = 30.8 bits (68), Expect = 9.6 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -2 Query: 218 TMASASESSPYTSWNSASPRGTPSDHMNWLNTSGLDSS 105 TM + E+S + NS G SD NW +G+DSS Sbjct: 778 TMTTTYENSSLSRSNSREQLGNGSDSENWRERNGIDSS 815 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 171,945,595 Number of extensions: 3488741 Number of successful extensions: 8241 Number of sequences better than 10.0: 29 Number of HSP's gapped: 8206 Number of HSP's successfully gapped: 48 Length of query: 348 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 234 Effective length of database: 69,416,809 Effective search space: 16243533306 Effective search space used: 16243533306 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
