ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf116k01 |
|---|---|
| Clone Library Name | barley_pub |
>P84169:PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 - Gallus gallus| (Chicken) Length = 376 Score = 252 bits (643), Expect = 4e-66 Identities = 140/379 (36%), Positives = 216/379 (56%) Frame = +3 Query: 282 YVEAQRQARPXXXXXXXXXXXXXQRKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISD 461 +++ + A P +KLWHQLTL++ F+Q P GD LI+LY NFIS+ Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66 Query: 462 FETKINLLKLAQFAVIASRQYPDKDAAIAFLEGIITKLRETRELRINEPILHVKMQIAAI 641 FE ++N L L + + RQ D A+ FLE K++ + +E ++ K I A+ Sbjct: 67 FEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 121 Query: 642 HLDKGNHKECKNLLEEGKTTLDGMTDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYL 821 L+ G+ + K +EE + L+ + V +VH+ FY +SS+Y++++ A +YK+AL +L Sbjct: 122 KLNIGDLQVTKETIEEVEEMLNNLPGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFL 180 Query: 822 AYTTVGXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIIISLIGTKVEWVYHMLQAF 1001 V G+ +YNFGELL HP++ SL T +W+ L AF Sbjct: 181 GCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAF 240 Query: 1002 NTGNLALYQELCGVHNAALSAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVI 1181 N+GN+ +Q L +A QP L NE LL+KI +LCLME+ F+RP+ R + I Sbjct: 241 NSGNVETFQAL----KSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEI 296 Query: 1182 AKQTKLSTSEVECLLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSW 1361 AK K++ +EVE L+MK+LSV L++G IDEVD VH++WVQPRVL + Q+K +++RL+ W Sbjct: 297 AKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFW 356 Query: 1362 VGKVHSTLLSIEAETPDLV 1418 V S + +E + D++ Sbjct: 357 CTDVRSMEMLVEHQAHDIL 375
>Q9UNM6:PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 - Homo sapiens| (Human) Length = 376 Score = 249 bits (635), Expect = 3e-65 Identities = 135/355 (38%), Positives = 210/355 (59%) Frame = +3 Query: 354 RKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISDFETKINLLKLAQFAVIASRQYPDK 533 +KLWHQLTL++ F+Q P GD LI+LY NFIS+FE ++N L L + + RQ D Sbjct: 31 KKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDP 90 Query: 534 DAAIAFLEGIITKLRETRELRINEPILHVKMQIAAIHLDKGNHKECKNLLEEGKTTLDGM 713 + A+ FLE K++ + +E ++ K I A+ L+ G+ + K +E+ + L+ + Sbjct: 91 NVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNL 145 Query: 714 TDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYLAYTTVGXXXXXXXXXXXXXXXXXX 893 V +VH+ FY +SS+Y++++ A +YK+AL +L + Sbjct: 146 PGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAG 204 Query: 894 XXGDNIYNFGELLAHPIIISLIGTKVEWVYHMLQAFNTGNLALYQELCGVHNAALSAQPA 1073 G+ ++NFGELL HP++ SL T +W+ L AFN+GN+ +Q L A QP Sbjct: 205 LLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTL----KTAWGQQPD 260 Query: 1074 LVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVECLLMKSLSVHLI 1253 L NE +LL KI +LCLME+ F+RP+ R + IAK K++ +EVE L+MK+LSV L+ Sbjct: 261 LAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLV 320 Query: 1254 EGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIEAETPDLV 1418 +G IDEVD VH++WVQPRVL + Q+K +++RL+ W V S + +E + D++ Sbjct: 321 KGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDIL 375
>Q5E964:PSD13_BOVIN 26S proteasome non-ATPase regulatory subunit 13 - Bos taurus (Bovine)| Length = 376 Score = 249 bits (635), Expect = 3e-65 Identities = 135/355 (38%), Positives = 210/355 (59%) Frame = +3 Query: 354 RKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISDFETKINLLKLAQFAVIASRQYPDK 533 +KLWHQLTL++ F+Q P GD LI+LY NFIS+FE ++N L L + + RQ D Sbjct: 31 KKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDP 90 Query: 534 DAAIAFLEGIITKLRETRELRINEPILHVKMQIAAIHLDKGNHKECKNLLEEGKTTLDGM 713 + A++FLE K++ + +E ++ K I A+ L+ G+ + K +E+ + L + Sbjct: 91 NVALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNL 145 Query: 714 TDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYLAYTTVGXXXXXXXXXXXXXXXXXX 893 V +VH+ FY +SS+Y++++ A +YK+AL +L + Sbjct: 146 PGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAG 204 Query: 894 XXGDNIYNFGELLAHPIIISLIGTKVEWVYHMLQAFNTGNLALYQELCGVHNAALSAQPA 1073 GD ++NFGELL HP++ SL T +W+ L AFN+GN+ +Q L A QP Sbjct: 205 LLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTL----KTAWGQQPD 260 Query: 1074 LVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVECLLMKSLSVHLI 1253 L NE +LL KI +LCLME+ F+RP+ R + IA+ K++ +EVE L+MK+LSV L+ Sbjct: 261 LAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIARSAKITVNEVELLVMKALSVGLV 320 Query: 1254 EGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIEAETPDLV 1418 +G IDEVD VH++WVQPRVL + Q+K +++RL+ W V S + +E + D++ Sbjct: 321 KGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDIL 375
>Q9WVJ2:PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 - Mus musculus| (Mouse) Length = 376 Score = 244 bits (622), Expect = 1e-63 Identities = 133/355 (37%), Positives = 208/355 (58%) Frame = +3 Query: 354 RKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISDFETKINLLKLAQFAVIASRQYPDK 533 +KLWHQLTL++ F+Q P GD LI+LY NFIS+FE ++N L L + + RQ D Sbjct: 31 KKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDP 90 Query: 534 DAAIAFLEGIITKLRETRELRINEPILHVKMQIAAIHLDKGNHKECKNLLEEGKTTLDGM 713 + A+ FLE K++ + +E ++ K I A+ L+ G+ + K +E+ + L+ + Sbjct: 91 NVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNL 145 Query: 714 TDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYLAYTTVGXXXXXXXXXXXXXXXXXX 893 V +VH+ FY +SS+Y++++ A +YK+AL +L + Sbjct: 146 PGVT-SVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAG 204 Query: 894 XXGDNIYNFGELLAHPIIISLIGTKVEWVYHMLQAFNTGNLALYQELCGVHNAALSAQPA 1073 G+ ++NFGELL HP++ SL T +W+ L AFN+G + +Q L A QP Sbjct: 205 LLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTL----KCAWGQQPD 260 Query: 1074 LVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVECLLMKSLSVHLI 1253 L NE +LL KI +LCLME+ F+RP+ R + IAK K++ ++VE L+MK+LSV L+ Sbjct: 261 LAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLV 320 Query: 1254 EGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIEAETPDLV 1418 G IDEVD VH++WVQPRVL + Q+K +++RL+ W V S + +E + D++ Sbjct: 321 RGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLELWCTDVKSMEMLVEHQAQDIL 375
>Q9US13:RPN9_SCHPO Probable 26S proteasome regulatory subunit rpn9 - Schizosaccharomyces| pombe (Fission yeast) Length = 381 Score = 188 bits (477), Expect = 7e-47 Identities = 112/337 (33%), Positives = 183/337 (54%) Frame = +3 Query: 351 QRKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISDFETKINLLKLAQFAVIASRQYPD 530 +RKLW QLT L F P +T + LY NF++ F IN LK A + + + + Sbjct: 36 ERKLWKQLTDALIVFFDTP--ETVPLRLPLYTNFVNSFRPNINQLK-AVYMGLKAFESCS 92 Query: 531 KDAAIAFLEGIITKLRETRELRINEPILHVKMQIAAIHLDKGNHKECKNLLEEGKTTLDG 710 D A+ L I+ +L E + + ++ + IA I L G E + LL + +D Sbjct: 93 NDEALRNLNQIVNELDEEK---YKDAYVYSIVAIARIKLISGKLDEARELLVKASKIIDH 149 Query: 711 MTDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYLAYTTVGXXXXXXXXXXXXXXXXX 890 + V+ +H+S+Y +S+ Y+K+ ++A++Y++ LLYL+ + Sbjct: 150 IDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLYLSCIDLDKCSHTELVERAVDLSVA 209 Query: 891 XXXGDNIYNFGELLAHPIIISLIGTKVEWVYHMLQAFNTGNLALYQELCGVHNAALSAQP 1070 GD IYNFGELL HP+ L+GT+ EW++ ++ A N G+L L++ L G ++ P Sbjct: 210 AILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDLPLFERLMG----QINKMP 264 Query: 1071 ALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVECLLMKSLSVHL 1250 L + L +KI ++ L+E++F P RT+ IA+ T++ ++EVE L+M++LSV L Sbjct: 265 LLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARATRIPSNEVELLIMRALSVGL 324 Query: 1251 IEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSW 1361 I G+IDEV V +S VQ R+L Q+ ++ RL W Sbjct: 325 ITGVIDEVTQIVTISSVQSRILNHSQIASMESRLREW 361
>Q04062:RPN9_YEAST 26S proteasome regulatory subunit RPN9 - Saccharomyces cerevisiae| (Baker's yeast) Length = 393 Score = 163 bits (413), Expect = 2e-39 Identities = 108/360 (30%), Positives = 189/360 (52%), Gaps = 10/360 (2%) Frame = +3 Query: 351 QRKLWHQLTLKLDQFLQIPAAQTGDTLIQLYNNFISDFETKINLLKLAQFAVIASRQYPD 530 + KLW QL+ L +F A++ ++LY+NF+S F KIN L + ++ + + + D Sbjct: 34 EEKLWFQLSESLTKFFD--DAKSTPLRLRLYDNFVSKFYDKINQLSVVKYLLASLKDSKD 91 Query: 531 KDAAIAFLEGIITKLRE--TRELRIN------EPILHVKMQIAAIHLDKGNHKECKNLLE 686 D ++ +L+ + + +E +++ R N + IL + +IA +L K + + ++LL+ Sbjct: 92 FDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLD 151 Query: 687 EGKTTLDGMTDVDPTVHASFYWISSQYHKSLQEFAEFYKNALLYLAYTTVGXXXXXXXXX 866 + + TLD + + SFY +SQY K +F FY +LLYL+ Sbjct: 152 DLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQ 211 Query: 867 XXXXXXXXXXX-GDNIYNFGELLAHPIIISLIG-TKVEWVYHMLQAFNTGNLALYQELCG 1040 GD IYNFGELL HPI+ +++ + +W++ +L A G+ + L Sbjct: 212 QLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKFDSLIK 271 Query: 1041 VHNAALSAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVEC 1220 V +S P L Q+E L +KI ++ L+E +F + R + I+K T L VE Sbjct: 272 VQ---ISKIPILAQHESFLRQKICLMTLIETVFVK--NIRMLSFEDISKATHLPKDNVEH 326 Query: 1221 LLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIEA 1400 L+M+++S+ L++G ID+V+ V +SWVQPR++ Q+ +++RL W +V +EA Sbjct: 327 LVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQITKMKDRLVEWNDQVEKLGKKMEA 386
>Q09722:CSN7B_SCHPO COP9 signalosome complex subunit 7B - Schizosaccharomyces pombe| (Fission yeast) Length = 402 Score = 40.8 bits (94), Expect = 0.019 Identities = 25/105 (23%), Positives = 49/105 (46%) Frame = +3 Query: 1083 NEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKLSTSEVECLLMKSLSVHLIEGI 1262 +E + K+ +L + + P+ T+ +AK K+ +EVE ++ + L+EG Sbjct: 275 DEDAIARKMKLLTIASLATQAPNN--TLSYGDVAKSLKIDENEVELWIIDVIRAGLVEGR 332 Query: 1263 IDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIE 1397 + ++ T+ + RV G + AL E+L W + L +E Sbjct: 333 MSQLTKTLSIHRSSYRVFGKHEWVALHEKLAKWGSSLRYMLQVME 377
>Q9UUJ7:CSN7A_SCHPO COP9 signalosome complex subunit 7A - Schizosaccharomyces pombe| (Fission yeast) Length = 205 Score = 40.0 bits (92), Expect = 0.032 Identities = 19/71 (26%), Positives = 38/71 (53%) Frame = +3 Query: 1203 TSEVECLLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHST 1382 T VE +M+++ ++ G I+ T+HVSW R L ++ ++ LD ++ + + Sbjct: 101 TFTVEYYIMQAMMNQILVGKINAKTQTLHVSWALERFLDSKRIDEMKYSLDRFIERCSNI 160 Query: 1383 LLSIEAETPDL 1415 L ++A TP + Sbjct: 161 LFQLDAGTPSV 171
>Q9V4S8:CSN7_DROME COP9 signalosome complex subunit 7 - Drosophila melanogaster (Fruit| fly) Length = 278 Score = 38.9 bits (89), Expect = 0.071 Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 1/167 (0%) Frame = +3 Query: 906 NIYNFGELLAHPIIISLIGTKVEWVYHMLQAFNTGNLALYQELCGVHNAALSAQPALVQN 1085 N++ FGELLA P ++ L + L F G Y+E + PA+ Sbjct: 47 NVFVFGELLAEPSVLQLKDGPDSKHFETLNLFAYGT---YKEYRAQPEKFIELTPAM--- 100 Query: 1086 EQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAKQTKL-STSEVECLLMKSLSVHLIEGI 1262 QK L+ + I+ L + ++IP +++ + ++ + +E ++++++ +I G Sbjct: 101 -QKKLQHLTIVSL-------AIKAKSIPYALLLSELEIDNVRHLEDIIIEAIYADIIHGK 152 Query: 1263 IDEVDSTVHVSWVQPRVLGIPQVKALRERLDSWVGKVHSTLLSIEAE 1403 + + + V + Q R + + E L +WV S IE + Sbjct: 153 LFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQ 199
>Q94899:CSN2_DROME COP9 signalosome complex subunit 2 - Drosophila melanogaster (Fruit| fly) Length = 444 Score = 36.6 bits (83), Expect = 0.35 Identities = 29/140 (20%), Positives = 67/140 (47%), Gaps = 3/140 (2%) Frame = +3 Query: 984 HMLQAFNTGNLALYQELCGVHNAALSAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRT 1163 +++ ++ ++ ++ + H + + A + ++ + LL I L+++I RP ++ Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLI--RPYKNIA 371 Query: 1164 IPLSVIAKQTKLSTSEVECLLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALR 1343 IP IA + +EVE LL+ + I+G ID+V+ +VL + ++ + Sbjct: 372 IPF--IANALNIEPAEVESLLVSCILDDTIKGRIDQVN----------QVLQLDKINSSA 419 Query: 1344 ER---LDSWVGKVHSTLLSI 1394 R L+ W ++ S ++ Sbjct: 420 SRYNALEKWSNQIQSLQFAV 439
>Q9SA98:ALKBH_ARATH Alkylated DNA repair protein alkB homolog - Arabidopsis thaliana| (Mouse-ear cress) Length = 354 Score = 33.9 bits (76), Expect = 2.3 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%) Frame = -3 Query: 1778 FLSGTNLRK*ARFSCVSVSIAQWKRKKNWQTAGLQIIKFNWEKTS-----------DALC 1632 F ++ K R SC SVS + RK W T GLQ F+W K + DALC Sbjct: 151 FYEEVDIEKATRSSCKSVSASVLLRKLRWSTLGLQ---FDWSKRNYDVSLPHNNIPDALC 207 Query: 1631 R 1629 + Sbjct: 208 Q 208
>Q9YNA4:PB2_THOGV Polymerase basic protein 2 - Thogoto virus (isolate SiAr 126) (Tho)| Length = 769 Score = 32.3 bits (72), Expect = 6.6 Identities = 22/84 (26%), Positives = 39/84 (46%) Frame = +3 Query: 519 QYPDKDAAIAFLEGIITKLRETRELRINEPILHVKMQIAAIHLDKGNHKECKNLLEEGKT 698 QY D+ G + KL+ R+ EPI V+ Q +A+H+ ++L++ K Sbjct: 178 QYTTLDSKRKAHMGAVEKLK-----RVMEPICKVQTQESAVHI-------ARSLIDSNKK 225 Query: 699 TLDGMTDVDPTVHASFYWISSQYH 770 L + D P +++ S+YH Sbjct: 226 WLPTVVDHTPRTAEMAHFLCSKYH 249
>Q9FGC9:EF121_ARATH Putative ethylene-responsive transcription factor ERF121 -| Arabidopsis thaliana (Mouse-ear cress) Length = 162 Score = 32.3 bits (72), Expect = 6.6 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Frame = -2 Query: 693 SLPP--AGSCTLCG-SLCRG------ELLRSAS*REGWAH*SAAPWSREAW*LSPRGRRW 541 +LPP AG C LCG + C G E ++ +G + WS E W S R RRW Sbjct: 56 ALPPSDAGPCPLCGVTSCYGCAFPQHEEIKQEKKHKGVRKKPSGKWSAEIWDPSTRTRRW 115
>Q8EJ54:ASTD_SHEON N-succinylglutamate 5-semialdehyde dehydrogenase - Shewanella| oneidensis Length = 487 Score = 32.0 bits (71), Expect = 8.6 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%) Frame = -3 Query: 794 LSKLLERLMVLRRYPVEASMDRWIH--ISHAIQGGLPFLQ-QVLALFVVPFVEVNCCDLH 624 ++KL+E + ++ P A ++ IS A G+ Q +L+L VP VE+ +H Sbjct: 295 VAKLVEAVKQIKVGPWNAQPQPFMGSMISEAAAKGMVAAQANLLSLGGVPLVEL----MH 350 Query: 623 LDVKDGLIDPQLPGLAKLGDYPLEEGDGGILVRILARGYDRELGEFEQVDFRFEIG 456 L GL+ P L + + + P EE G +L + +D+ + Q + G Sbjct: 351 LQAGTGLVSPGLIDVTAVSELPDEEYFGPLLQLVRYSDFDQAIKLANQTRYGLSAG 406
>P41073:PEP_DROME Zinc finger protein on ecdysone puffs - Drosophila melanogaster| (Fruit fly) Length = 716 Score = 32.0 bits (71), Expect = 8.6 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 219 GFGEGEGDDHRQLEREAMRRGEEDGSKTLVSDDINE 112 G G+GEG + + E E + GEE +T D++NE Sbjct: 400 GAGDGEGAEGDEAEGEEAKEGEEAADETKEGDELNE 435 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 300,784,605 Number of extensions: 6637225 Number of successful extensions: 17677 Number of sequences better than 10.0: 15 Number of HSP's gapped: 17652 Number of HSP's successfully gapped: 15 Length of query: 596 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 477 Effective length of database: 68,045,334 Effective search space: 32457624318 Effective search space used: 32457624318 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
