ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf113j06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106060:Os03g0263500 | 404 | e-113 | 2 | AK059869:Os03g0831900 | 33 | 0.32 | 3 | AK073865:Os06g0651300 | 33 | 0.55 | 4 | AK102638:Os11g0258900 | 32 | 0.94 | 5 | AK107635:Os09g0572500 | 30 | 3.6 | 6 | Os12g0481000:Os12g0481000 | 30 | 4.7 | 7 | AK107125:Os12g0168100 | 30 | 4.7 | 8 | AK119918:Os03g0105000 | 29 | 6.1 | 9 | AK103402:Os01g0583200 | 29 | 6.1 | 10 | AK059387:Os01g0583200 | 29 | 6.1 | 11 | Os10g0186800:Os10g0186800 | 29 | 8.0 | 12 | AK062418:Os06g0710400 | 29 | 8.0 | 13 | Os03g0383700:Os03g0383700 | 29 | 8.0 | 14 | Os01g0148000:Os01g0148000 | 29 | 8.0 |
|---|
>AK106060:Os03g0263500 | Length = 321 Score = 404 bits (1037), Expect = e-113 Identities = 190/219 (86%), Positives = 198/219 (90%) Frame = +3 Query: 42 MDREWGSKPGSGGAATAQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 221 MDREWGSKPGSGGAA+AQNEAID TIDLAKDPYFMRNHLGSYECKLCLTL Sbjct: 1 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60 Query: 222 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYTVTKQ 401 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRK APRKSVKIGRPGY VTKQ Sbjct: 61 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKFAPRKSVKIGRPGYQVTKQ 120 Query: 402 YDPDTKQHSFLFEIEYPEIEDNSKPRHRFMASYEQKIQSWDKRYQYLLFAAEPYEVIGFK 581 YDPD KQHSFLFEI YPEIE+NSKPRHRFMASYEQK++SWDK+YQYLLFAAEPYE+IGFK Sbjct: 121 YDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLLFAAEPYEIIGFK 180 Query: 582 IPSTEIDKSTDKFFSYWDPDKKSYILQLYFKPRPPEINR 698 IPS EIDKS DKFF+YWDPDKK YILQLYFK R PE N+ Sbjct: 181 IPSAEIDKSADKFFNYWDPDKKQYILQLYFKTRQPEANK 219
>AK059869:Os03g0831900 | Length = 202 Score = 33.5 bits (75), Expect = 0.32 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRK 359 Y CK+C + + NYL H GK+HQ L + R + + Q Q L RK Sbjct: 82 YYCKVCECVVKDSANYLDHINGKKHQRALG-MSMRVERASLEQVQKRFESLKKRK 135
>AK073865:Os06g0651300 | Length = 460 Score = 32.7 bits (73), Expect = 0.55 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNL----AKRAAREAKDAPAQPQPNKRKLAPRKS 362 + C LC +EG H +GKRH+ L A A ++ K + + NK P + Sbjct: 224 WSCALCQVSATSEGALNEHLEGKRHKAKLAHCGASNAIKDGKSSLKEKTANKDDAGPSDA 283 Query: 363 VK 368 K Sbjct: 284 PK 285
>AK102638:Os11g0258900 | Length = 134 Score = 32.0 bits (71), Expect = 0.94 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = -3 Query: 872 WRGWR-----LKTAHWWWRDPRGHSHRCIRWRWWQSLWMGR-WPW 756 WRG R K + W WR R R RWRW Q+ W GR PW Sbjct: 49 WRGQRDRLGIEKRSRWQWRPAR--RERRGRWRWRQA-WRGRSGPW 90
>AK107635:Os09g0572500 | Length = 541 Score = 30.0 bits (66), Expect = 3.6 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +2 Query: 737 RPSWCSTKATVPSTGSATTSTECTYGNAP*DPATTNERSSTSTPST 874 R SW +T PST S T +T T + P ++ S+TS PS+ Sbjct: 485 RSSWGPACSTAPSTTSPTAATASTSTCSSSRPPPSSSASATSGPSS 530
>Os12g0481000:Os12g0481000 | Length = 459 Score = 29.6 bits (65), Expect = 4.7 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 884 CKRRWRGWRLKTAHWWWRDP 825 C+RRW WR H ++R P Sbjct: 407 CRRRWHRWRANLVHTYFRSP 426
>AK107125:Os12g0168100 | Length = 341 Score = 29.6 bits (65), Expect = 4.7 Identities = 21/57 (36%), Positives = 24/57 (42%) Frame = -3 Query: 881 KRRWRGWRLKTAHWWWRDPRGHSHRCIRWRWWQSLWMGRWPWWSTRRASCSIWNSPR 711 + RWR R + W R RG R RWR W W WP + RR C PR Sbjct: 30 RARWR--RRRRRCWRRRCCRGGGRRR-RWRRWCRRWRVSWPAAAARR--CRRRGQPR 81
>AK119918:Os03g0105000 | Length = 169 Score = 29.3 bits (64), Expect = 6.1 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = -3 Query: 884 CKRRWRGWRLKTAHWWWRDPRGHSHRCIRWRW-WQSLWMG 768 C RRW WR WR RG R RW WQ W+G Sbjct: 32 CGRRWSEWRR------WRRRRGW-----RRRWGWQRRWIG 60
>AK103402:Os01g0583200 | Length = 322 Score = 29.3 bits (64), Expect = 6.1 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +3 Query: 201 CKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSV 365 C LC T ++ L+H GK+H+ AK A A +Q Q N + P+++V Sbjct: 114 CSLCKTTTTSKQTLLSHADGKKHR---AKAKAYHA----SQKQANGVEQTPKETV 161
>AK059387:Os01g0583200 | Length = 322 Score = 29.3 bits (64), Expect = 6.1 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +3 Query: 201 CKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSV 365 C LC T ++ L+H GK+H+ AK A A +Q Q N + P+++V Sbjct: 114 CSLCKTTTTSKQTLLSHADGKKHR---AKAKAYHA----SQKQANGVEQTPKETV 161
>Os10g0186800:Os10g0186800 | Length = 343 Score = 28.9 bits (63), Expect = 8.0 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%) Frame = +3 Query: 243 LAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSV-KIGRPGYTVTKQYDPDTK 419 L HTQ K T K + R+ + P P+ P I R +++ + PD + Sbjct: 12 LEHTQRKTMATPARKVSPRQERLGTTAPAPSPTAAPPVTCTGGIARRCTSISATFGPDRR 71 Query: 420 QHSFLFEIEYPEIEDNSKPRHRFMASYEQK 509 + S ++ Y + + PR M S ++K Sbjct: 72 RRSMSVQVLYGVLHHSLNPR---MGSLKRK 98
>AK062418:Os06g0710400 | Length = 112 Score = 28.9 bits (63), Expect = 8.0 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 12/67 (17%) Frame = -3 Query: 839 WWRDPRGHSHRCIRW------------RWWQSLWMGRWPWWSTRRASCSIWNSPRSCWLS 696 WWR C+ W R W+ +G W WWS + + + Sbjct: 46 WWRSSSDAIAVCVPWCRSSAAMDSSWGRRWRRGGVGGWWWWSAMSNALECDEAAAAARRG 105 Query: 695 IDLRRSW 675 + LR W Sbjct: 106 VALRGGW 112
>Os03g0383700:Os03g0383700 | Length = 125 Score = 28.9 bits (63), Expect = 8.0 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +1 Query: 580 RYQAQRLTNRQTSFSHTGIRTRNRT-FCNYTSSQDRRRS 693 +Y+ Q+ TNR TS HTG+ +RN T T D RRS Sbjct: 88 QYKQQKNTNRSTS--HTGVTSRNHTRLFKPTIISDVRRS 124
>Os01g0148000:Os01g0148000 | Length = 1980 Score = 28.9 bits (63), Expect = 8.0 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = -2 Query: 759 LVEHQEGLLFHLEQSQELL 703 L EHQEGLL +LE+ +EL+ Sbjct: 37 LQEHQEGLLIYLEEHKELI 55 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,670,494 Number of extensions: 593485 Number of successful extensions: 2169 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2162 Number of HSP's successfully gapped: 14 Length of query: 417 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 314 Effective length of database: 11,275,632 Effective search space: 3540548448 Effective search space used: 3540548448 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
