| Clone Name | FLbaf113j06 |
|---|---|
| Clone Library Name | barley_pub |
>Q15428:SF3A2_HUMAN Splicing factor 3A subunit 2 - Homo sapiens (Human)| Length = 464 Score = 271 bits (694), Expect = 3e-72 Identities = 129/216 (59%), Positives = 160/216 (74%), Gaps = 4/216 (1%) Frame = +3 Query: 57 GSKPGSGGAATAQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 236 G K GSGG A++ D TID+ KDPYFM+NHLGSYECKLCLTLHNNEG Sbjct: 8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67 Query: 237 NYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYTVTKQYDPDT 416 +YLAHTQGK+HQTNLA+RAA+EAK+APAQP P K K+ +K VKIGRPGY VTKQ D + Sbjct: 68 SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDSEM 127 Query: 417 KQHSFLFEIEYPEIEDNSKPRHRFMASYEQKIQSWDKRYQYLLFAAEPYEVIGFKIPSTE 596 Q S LF+I+YPEI + PRHRFM++YEQ+I+ D+R+QYLL AAEPYE I FK+PS E Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187 Query: 597 IDKSTDKFFSYWDPDKKSYILQLYFK----PRPPEI 692 IDK+ KF+++W+ + K + LQ +FK P PP + Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSL 223
>Q62203:SF3A2_MOUSE Splicing factor 3A subunit 2 - Mus musculus (Mouse)| Length = 475 Score = 255 bits (652), Expect = 2e-67 Identities = 127/216 (58%), Positives = 153/216 (70%), Gaps = 4/216 (1%) Frame = +3 Query: 57 GSKPGSGGAATAQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 236 G K GSGG A++ D TID+ KDPYFM+NHLGSYECKLCLTLHNNEG Sbjct: 8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67 Query: 237 NYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYTVTKQYDPDT 416 +YLAHTQGK+HQTNLA+RAA+EAK+APAQP P + K+ +K VKIGRPGY VTKQ D + Sbjct: 68 SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEQVKVEVKKFVKIGRPGYKVTKQRDTEM 127 Query: 417 KQHSFLFEIEYPEIEDNSKPRHRFMASYEQKIQSWDKRYQYLLFAAEPYEVIGFKIPSTE 596 Q S LF+I+YPEI + PRHRFM++YEQ+I+ D+R+QYLL AAEPYE I FK+PS E Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187 Query: 597 IDKSTDKFFSYWDPDKKSYILQLYFK----PRPPEI 692 IDK+ KFF LQ +FK P PP + Sbjct: 188 IDKAEGKFF----------FLQFHFKMEKPPAPPSL 213
>Q07350:PRP11_YEAST Pre-mRNA-splicing factor PRP11 - Saccharomyces cerevisiae (Baker's| yeast) Length = 266 Score = 66.2 bits (160), Expect = 3e-10 Identities = 66/263 (25%), Positives = 102/263 (38%), Gaps = 52/263 (19%) Frame = +3 Query: 57 GSKPGSGGAATA------QNEAIDXXXXXXXXXXXTIDLAKD------PYFMRNHLGSYE 200 GSK G GG A+ + + ++ T KD PY +NH G Sbjct: 8 GSKKGGGGIASESQFNLQRRKEVESLLSKGENVPYTFQDEKDDQVRSNPYIYKNHSGKLV 67 Query: 201 CKLCLTLHNNEGNYLAHTQGKRHQTNLAKRA--------AREAKDAPAQPQPNK------ 338 CKLC T+H + + H GK+H N+ +R RE + Q K Sbjct: 68 CKLCNTMHMSWSSVERHLGGKKHGLNVLRRGISIEKSSLGREGQTTHDFRQQQKIIEAKQ 127 Query: 339 ----------RKLAPRKSVKIGRPGYTVTKQYDPDTKQHSFLFEIEYPEIEDNSK--PRH 482 K+A K+ K G G + Y + K++S + +D +K P Sbjct: 128 SLKNNGTIPVCKIATVKNPKNGSVGLAIQVNYSSEVKENSV-------DSDDKAKVPPLI 180 Query: 483 RFMASYEQKIQSWDKRYQYLLFAAEPYEVIGFKIPSTEI--------DKSTD------KF 620 R ++ E + K ++L+ A EP+E I ++P EI D + D K Sbjct: 181 RIVSGLELS-DTKQKGKKFLVIAYEPFENIAIELPPNEILFSENNDMDNNNDGVDELNKK 239 Query: 621 FSYWDPDKKSYILQLYFKPRPPE 689 ++WD K Y +Q +FK E Sbjct: 240 CTFWDAISKLYYVQFFFKQAEQE 262
>Q3MHS2:CCD16_RAT Coiled-coil domain-containing protein 16 - Rattus norvegicus (Rat)| Length = 370 Score = 43.9 bits (102), Expect = 0.001 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 4/98 (4%) Frame = +3 Query: 159 KDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAK----RAAREAKDAPAQP 326 + P+ N LG C LC T +E + H GK+H+ +A+ + A + A P Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKGAKGATQGPSAGTAP 98 Query: 327 QPNKRKLAPRKSVKIGRPGYTVTKQYDPDTKQHSFLFE 440 QP KRK +S + +V Q P T S FE Sbjct: 99 QPTKRKTTDVESQDAKKAKASV-DQVQPSTSASSANFE 135
>Q96NB3:CCD16_HUMAN Coiled-coil domain-containing protein 16 - Homo sapiens (Human)| Length = 372 Score = 43.5 bits (101), Expect = 0.002 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Frame = +3 Query: 159 KDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAK----RAAREAKDAPAQP 326 + P+ N LG C LC T +E + H GK+H+ +A+ + A + A + P Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAELKGAKEASQGSSASSAP 98 Query: 327 QPNKRKLAPRKSVKIGRPGYTVTKQYDPDTKQHSFLFE 440 Q KRK + R T+ Q P T + F+ Sbjct: 99 QSVKRKAPDADDQDVKRAKATLVPQVQPSTSAWTTNFD 136
>Q8R1N0:CCD16_MOUSE Coiled-coil domain-containing protein 16 - Mus musculus (Mouse)| Length = 363 Score = 38.9 bits (89), Expect = 0.045 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Frame = +3 Query: 159 KDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAK-RAAREAKDAPAQ---P 326 + P+ N LG C LC T +E + H GK+H+ +A+ + A+ A P+ P Sbjct: 39 ESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKGAKGATQGPSTGTVP 98 Query: 327 QPNKRKLAPRKSVKIGRPGYTVTKQYDPDTKQHS 428 Q KR+ +S + + Q P T S Sbjct: 99 QATKRRATDVESQDAKKAKASAGPQVQPSTSASS 132
>Q9MTK1:RR18_OENHO Chloroplast 30S ribosomal protein S18 - Oenothera hookeri (Hooker's| evening primrose) Length = 101 Score = 37.4 bits (85), Expect = 0.13 Identities = 25/79 (31%), Positives = 38/79 (48%) Frame = +1 Query: 415 RSNTRFSLRLSTLKSKIIASQGTVSWHHMNRKSNLGIRGINIYFLQRSPMKSLALRYQAQ 594 +S R R +L S+ I+ QG + +NR + R I I Q + L R +AQ Sbjct: 23 QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQRLITIAINQARILSLLPFRPKAQ 82 Query: 595 RLTNRQTSFSHTGIRTRNR 651 R Q++ G+RTRN+ Sbjct: 83 RFKRSQSTARTVGLRTRNK 101
>Q9CPW7:ZMAT2_MOUSE Zinc finger matrin-type protein 2 - Mus musculus (Mouse)| Length = 199 Score = 35.8 bits (81), Expect = 0.38 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +3 Query: 177 RNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNL--AKRAAREAKD-APAQPQPNKRKL 347 ++ +G Y C +C + + N+L H GK+HQ NL + R R D + + NK+K+ Sbjct: 74 QSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKM 133 Query: 348 APRK 359 ++ Sbjct: 134 EEKQ 137
>Q96NC0:ZMAT2_HUMAN Zinc finger matrin-type protein 2 - Homo sapiens (Human)| Length = 199 Score = 35.8 bits (81), Expect = 0.38 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +3 Query: 177 RNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNL--AKRAAREAKD-APAQPQPNKRKL 347 ++ +G Y C +C + + N+L H GK+HQ NL + R R D + + NK+K+ Sbjct: 74 QSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKM 133 Query: 348 APRK 359 ++ Sbjct: 134 EEKQ 137
>Q6S6W0:VGLX_EHV1V Glycoprotein X precursor - Equine herpesvirus 1 (strain V592)| (EHV-1) (Equine abortion virus) Length = 866 Score = 35.8 bits (81), Expect = 0.38 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Frame = +2 Query: 632 GSGQEIVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTK--------ATVPSTGSA 787 GSGQ T + TTSSS S PS ST+ ++ PST S+ Sbjct: 37 GSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASS 96 Query: 788 TTSTECTYGNAP*DPATTNERSSTSTPSTS 877 TTS + + TT +ST+TP+T+ Sbjct: 97 TTSIPTSTST---ETTTTTPTASTTTPTTT 123
>P28968:VGLX_EHV1B Glycoprotein X precursor - Equine herpesvirus 1 (strain Ab4p)| (EHV-1) (Equine abortion virus) Length = 797 Score = 35.8 bits (81), Expect = 0.38 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Frame = +2 Query: 632 GSGQEIVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTK--------ATVPSTGSA 787 GSGQ T + TTSSS S PS ST+ ++ PST S+ Sbjct: 37 GSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASS 96 Query: 788 TTSTECTYGNAP*DPATTNERSSTSTPSTS 877 TTS + + TT +ST+TP+T+ Sbjct: 97 TTSIPTSTST---ETTTTTPTASTTTPTTT 123
>P40954:CHI3_CANAL Chitinase 3 precursor - Candida albicans (Yeast)| Length = 567 Score = 35.0 bits (79), Expect = 0.65 Identities = 23/81 (28%), Positives = 43/81 (53%) Frame = +2 Query: 638 GQEIVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGN 817 G+E S+T T T SSS SK ++ + +T +++ ST S+TTS+ + Sbjct: 316 GEETTSSSTTTTTTTTST--TISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSST 373 Query: 818 AP*DPATTNERSSTSTPSTSA 880 + +TT+ +++S ST++ Sbjct: 374 SSSTSSTTSSSTTSSQISTTS 394
>Q5R4W8:ZN346_PONPY Zinc finger protein 346 - Pongo pygmaeus (Orangutan)| Length = 310 Score = 34.3 bits (77), Expect = 1.1 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQP 332 Y CK C + N+ Y AH G +H+ K A P Q QP Sbjct: 255 YPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQP 300
>Q9UL40:ZN346_HUMAN Zinc finger protein 346 - Homo sapiens (Human)| Length = 294 Score = 34.3 bits (77), Expect = 1.1 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQP 332 Y CK C + N+ Y AH G +H+ K A P Q QP Sbjct: 239 YPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQP 284
>P53832:WSC2_YEAST Cell wall integrity and stress response component 2 precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 503 Score = 34.3 bits (77), Expect = 1.1 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +2 Query: 656 SATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPA 835 S+T T T+ SS +K + + S S+ AT S+ S+TTST + + Sbjct: 127 SSTATSTSTTSSSSTSVSSKTSTKLDTKTS-TSSSATHSSSSSSTTSTTTSSSETTTSSS 185 Query: 836 TTNERSSTSTPSTSA 880 +++ SSTST ST++ Sbjct: 186 SSSSSSSTSTTSTTS 200 Score = 31.6 bits (70), Expect = 7.2 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +2 Query: 656 SATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPA 835 SAT + ++ TTSSS + + S ST T ST S T+ST T + + Sbjct: 160 SATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTT--STTSTTSSTTSTSSSPSTTSS 217 Query: 836 TTNERSSTSTPSTSA 880 +T+ SS+ T ST A Sbjct: 218 STSASSSSETSSTQA 232 Score = 31.6 bits (70), Expect = 7.2 Identities = 21/82 (25%), Positives = 43/82 (52%) Frame = +2 Query: 635 SGQEIVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYG 814 S + S++ + + TTS++ + + PS S+ +T S+ S T+ST+ T Sbjct: 177 SSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSS-STSASSSSETSSTQATSS 235 Query: 815 NAP*DPATTNERSSTSTPSTSA 880 + ++T+ + TSTPS+++ Sbjct: 236 STTSTSSSTSTATVTSTPSSTS 257
>P47179:DAN4_YEAST Cell wall protein DAN4 precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 1161 Score = 34.3 bits (77), Expect = 1.1 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 656 SATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGS-ATTSTECTYGNAP*DP 832 ++T Q T TTSS+ + P+ ST +T P+T + +TTST T AP Sbjct: 236 TSTTSQTSTKSTTPTTSSTSTTPTTSTTPT-TSTTSTAPTTSTTSTTSTTSTISTAP-TT 293 Query: 833 ATTNERSSTSTPSTSA 880 +TT+ STS+ S S+ Sbjct: 294 STTSSTFSTSSASASS 309 Score = 32.3 bits (72), Expect = 4.2 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 7/66 (10%) Frame = +2 Query: 701 TSSSWDCSKWNRRPSWCSTKATVPSTGS-------ATTSTECTYGNAP*DPATTNERSST 859 T+S+ + S STK+T P+T S +TT T T AP +TT+ S+T Sbjct: 226 TTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAP-TTSTTSTTSTT 284 Query: 860 STPSTS 877 ST ST+ Sbjct: 285 STISTA 290
>Q9R0B7:ZN346_MOUSE Zinc finger protein 346 - Mus musculus (Mouse)| Length = 294 Score = 33.9 bits (76), Expect = 1.4 Identities = 15/49 (30%), Positives = 20/49 (40%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKR 341 Y CK C + N+ Y AH G +H+ K P Q QP + Sbjct: 239 YPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPK 287
>P32323:AGA1_YEAST A-agglutinin anchorage subunit precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 725 Score = 33.9 bits (76), Expect = 1.5 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = +2 Query: 635 SGQEIVHSATILQAKTAGDQ*TTSS----SWDCSKWNRRPSWCSTKATVPSTGSATTSTE 802 S I+ T + T TT+S S S + PS ST ++ ST S++TST Sbjct: 161 SSASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTS 220 Query: 803 CTY-GNAP*DPATTNERSSTSTPSTS 877 + +P +T++ +STS+ STS Sbjct: 221 SSSTSTSPSSTSTSSSLTSTSSSSTS 246 Score = 31.6 bits (70), Expect = 7.2 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +2 Query: 698 TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTST-ECTYGNAP*DPATTNERSSTSTPST 874 ++S+S S + PS ST +++ ST S++TST + + + +T+ +STS+ ST Sbjct: 214 SSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSST 273 Query: 875 S 877 S Sbjct: 274 S 274
>Q9H5J0:ZBTB3_HUMAN Zinc finger and BTB domain-containing protein 3 - Homo sapiens| (Human) Length = 574 Score = 33.5 bits (75), Expect = 1.9 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +3 Query: 195 YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP---AQPQPNKRKLAPRKSV 365 YEC+ CL + G+ H + K H +LAKR+ + + P QP P A R+S Sbjct: 500 YECRYCLRSYTQSGDLYRHIR-KAHNEDLAKRSKPDPEVGPLLGVQPLPGS-PTADRQSS 557 Query: 366 KIGRP 380 G P Sbjct: 558 SGGGP 562
>Q0ZIZ8:RR18_VITVI Chloroplast 30S ribosomal protein S18 - Vitis vinifera (Grape)| Length = 101 Score = 33.5 bits (75), Expect = 1.9 Identities = 22/79 (27%), Positives = 37/79 (46%) Frame = +1 Query: 415 RSNTRFSLRLSTLKSKIIASQGTVSWHHMNRKSNLGIRGINIYFLQRSPMKSLALRYQAQ 594 +S R R +L S+ I+ QG + +NR + R I I Q + SL + Sbjct: 23 QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEK 82 Query: 595 RLTNRQTSFSHTGIRTRNR 651 + +++ TG+RTRN+ Sbjct: 83 QFERTESTARTTGLRTRNK 101
>Q15772:SPEG_HUMAN Striated muscle preferentially expressed protein kinase - Homo| sapiens (Human) Length = 3223 Score = 33.1 bits (74), Expect = 2.5 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +3 Query: 261 KRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGR 377 +R + +L + A EA PAQP P+K L P S ++G+ Sbjct: 280 RREEPDLQPQLASEAPRRPAQPPPSKSALLPPPSPRVGK 318
>P02314:HMGN2_CHICK Nonhistone chromosomal protein HMG-17 - Gallus gallus (Chicken)| Length = 90 Score = 32.7 bits (73), Expect = 3.2 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%) Frame = +3 Query: 285 KRAAR-EAKDAPAQPQPNKRKLAPRKSVKI 371 +R+AR AK AP +P+P +K AP+KS K+ Sbjct: 23 RRSARLSAKPAPPKPEPKPKKAAPKKSEKV 52
>P12902:HM14A_CHICK Nonhistone chromosomal protein HMG-14A - Gallus gallus (Chicken)| Length = 105 Score = 32.7 bits (73), Expect = 3.2 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 15/76 (19%) Frame = +3 Query: 246 AHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSV---------------KIGRP 380 A +G+ + + A AK AP +P+P +K AP+K K G Sbjct: 6 APAEGEAKEEPKRRSARLSAKPAPPKPEPKPKKAAPKKEKAANDKKEDKKAATKGKKGAK 65 Query: 381 GYTVTKQYDPDTKQHS 428 G TKQ D + HS Sbjct: 66 GKDETKQEDAKEENHS 81
>Q12140:BSC1_YEAST Bypass of stop codon protein 1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 328 Score = 32.3 bits (72), Expect = 4.2 Identities = 20/76 (26%), Positives = 38/76 (50%) Frame = +2 Query: 650 VHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*D 829 + +++I + T TTSS+ S + S+ + +T S+TTS+ T + Sbjct: 165 ITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSS 224 Query: 830 PATTNERSSTSTPSTS 877 T++ +S+ST S+S Sbjct: 225 STTSSSTTSSSTTSSS 240 Score = 32.0 bits (71), Expect = 5.5 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +2 Query: 647 IVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP* 826 I S+T + T TTSSS S + S+ + +T S+TTS+ T + Sbjct: 170 ITTSSTTTSSTTTSST-TTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTS 228 Query: 827 DPATTNERSSTSTPSTS 877 T++ +S+ST S+S Sbjct: 229 SSTTSSSTTSSSTTSSS 245 Score = 31.2 bits (69), Expect = 9.4 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +2 Query: 656 SATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPA 835 S+T + T TTSSS S + S+ + +T S+TTS+ T + + Sbjct: 183 SSTTTSSSTTSSS-TTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTT-SSS 240 Query: 836 TTNERSSTSTPSTSACK 886 TT+ + TST ++S K Sbjct: 241 TTSSSTKTSTTTSSTVK 257
>Q5B0L1:ATG15_EMENI Putative lipase atg15 - Emericella nidulans (Aspergillus nidulans)| Length = 590 Score = 32.3 bits (72), Expect = 4.2 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Frame = +2 Query: 713 WDCSKWN---RRPSWCSTKATVPSTGSATTSTECTYGNAP-----*DPATTNERSSTSTP 868 +DC W S +T ++ +T + TTST T P D +TT + +T+T Sbjct: 443 YDCELWKFFRSNGSEITTTSSTTTTSTITTSTRTTTCKTPGWWGCLDDSTTTDPPTTTTT 502 Query: 869 STSACK 886 ++S CK Sbjct: 503 TSSTCK 508
>Q4V8F7:CCD63_RAT Coiled-coil domain-containing protein 63 - Rattus norvegicus (Rat)| Length = 559 Score = 32.0 bits (71), Expect = 5.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -3 Query: 812 HRCIRWRWWQSLW----MGRWPWWSTRRASCSIWNSPRSCW 702 HR + W W +LW G W W +T R + N R CW Sbjct: 515 HRALSWVQWNTLWTTVASGSWSWRTTFRRN-EEKNHRRHCW 554
>Q6W4X9:MUC6_HUMAN Mucin-6 precursor - Homo sapiens (Human)| Length = 2392 Score = 31.6 bits (70), Expect = 7.2 Identities = 26/82 (31%), Positives = 34/82 (41%) Frame = +2 Query: 635 SGQEIVHSATILQAKTAGDQ*TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYG 814 SG HS+ TA +SSSW + RP +P SATT Sbjct: 2022 SGTSQTHSS--FSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTPV----- 2074 Query: 815 NAP*DPATTNERSSTSTPSTSA 880 +TTN+ SS+ +PS SA Sbjct: 2075 ------STTNQLSSSFSPSPSA 2090
>P98089:MUC2L_RAT Intestinal mucin-like protein - Rattus norvegicus (Rat)| Length = 837 Score = 31.6 bits (70), Expect = 7.2 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 710 SWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPATTNERSSTSTPSTSACK 886 +W C PS ST PST + TS++ T P P+TT+ +S+ STP +++ K Sbjct: 13 NWSC------PSTPSTPP--PSTPTTPTSSQTT---TPSTPSTTSSKSTPSTPQSTSSK 60
>Q89WA9:IF2_BRAJA Translation initiation factor IF-2 - Bradyrhizobium japonicum| Length = 902 Score = 31.2 bits (69), Expect = 9.4 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 222 HNNEGNYLAHTQGKRH--QTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYTVT 395 H +E A T+ K+ + AAR A APA P P A R RPG T Sbjct: 156 HEDEAKRKAETEAKKRFGEGEQPASAARPATAAPAAPAPRPGAPAARPGTTTTRPGTTTA 215 Query: 396 K 398 + Sbjct: 216 R 216
>Q24167:SIMA_DROME Protein similar - Drosophila melanogaster (Fruit fly)| Length = 1507 Score = 31.2 bits (69), Expect = 9.4 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +2 Query: 698 TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPATTNERSSTSTPS 871 TT S+ + + PS ST A S T+S+ +Y N+P P T N ++ S PS Sbjct: 705 TTCSTTASGQHYQSPSSSSTSAP-----SNTSSSNNSYANSPLSPLTPNSTATASNPS 757
>Q2L928:RR18_GOSHI Chloroplast 30S ribosomal protein S18 - Gossypium hirsutum (Upland| cotton) (Gossypium mexicanum) Length = 101 Score = 31.2 bits (69), Expect = 9.4 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = +1 Query: 415 RSNTRFSLRLSTLKSKIIASQGTVSWHHMNRKSNLGIRGINIYFLQRSPMKSLALRYQAQ 594 +S R R +L S+ I+ QG + +NR + R I I Q + SL + Sbjct: 23 QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEK 82 Query: 595 RLTNRQTSFSHTGIRTRNR 651 + +++ T +RTRN+ Sbjct: 83 QFERSESTTRTTALRTRNK 101
>Q95YF0:CLAP1_CAEEL Protein CLASP-1 - Caenorhabditis elegans| Length = 1378 Score = 31.2 bits (69), Expect = 9.4 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +2 Query: 698 TTSSSWDCSKWNRRPSWCSTKATVPSTGSATTSTECTYGNAP*DPATTNERSSTSTPSTS 877 T+ S+ S + + S +A PS G A +S T GN N +SS+S+PSTS Sbjct: 668 TSFSAVRSSGYGQNQSTTPNRAKTPSDGFAGSSPHYTNGN-------NNNKSSSSSPSTS 720 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 175,520,845 Number of extensions: 3525180 Number of successful extensions: 11495 Number of sequences better than 10.0: 32 Number of HSP's gapped: 11428 Number of HSP's successfully gapped: 38 Length of query: 417 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 301 Effective length of database: 68,868,219 Effective search space: 20729333919 Effective search space used: 20729333919 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)