ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf113j06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056169.1| Oryza sativa (japonica cultivar-group) Os03g0263500 (Os03g0263500) mRNA, complete cds Length = 1228 Score = 829 bits (418), Expect = 0.0 Identities = 583/638 (91%) Strand = Plus / Plus Query: 36 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgccaccgcgcag 95 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 54 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccag 113 Query: 96 aatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatcgaccta 155 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 114 aatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctc 173 Query: 156 gccaaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctg 215 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 174 gccaaggacccctacttcatgcgcaaccacctcggcagctacgagtgcaagctgtgcctg 233 Query: 216 acgctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagacc 275 ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 234 acgctgcacaacaacgaggggaactacctggctcacacgcaggggaagcggcaccagacc 293 Query: 276 aacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagccaaac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 294 aacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagcccaac 353 Query: 336 aagcgcaagctcgcgccccgcaagtctgttaagattggcagacctggatatacagtaact 395 ||| | ||| |||||||||||||||| ||||||||||| |||||||| ||| || ||| Sbjct: 354 aagagaaagttcgcgccccgcaagtccgttaagattggaagacctgggtatcaggtgact 413 Query: 396 aaacagtatgatcctgacacgaagcaacactcgtttctctttgagattgagtaccctgaa 455 || |||||||||||||||| |||||||||||| ||||| |||||||||| || |||||| Sbjct: 414 aagcagtatgatcctgacatgaagcaacactcatttctttttgagattggttatcctgaa 473 Query: 456 atcgaagataatagcaagccaaggcaccgtttcatggcatcatatgaacagaaaatccaa 515 || ||||| || |||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 474 attgaagaaaacagcaagccaaggcaccgtttcatggcatcatatgaacagaaagtcgaa 533 Query: 516 tcttgggataagaggtatcaatatctactttttgcagcggagccctatgaagtcattggc 575 ||||||||||| | |||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 534 tcttgggataaaaagtatcaatatctactttttgcagcagagccctatgaaattattggc 593 Query: 576 tttaagataccaagcacagagattgacaaatcgacagacaagtttttctcatactgggat 635 ||||||||||||||| ||||||| ||||| || |||| || || ||| || |||||| Sbjct: 594 tttaagataccaagcgcagagatcgacaagtcagcagataaattcttcaactattgggat 653 Query: 636 ccggacaagaaatcgtacattctgcaactatacttcaa 673 || ||||||||| ||||||||| |||||||||||||| Sbjct: 654 ccagacaagaaacagtacattctccaactatacttcaa 691 Score = 111 bits (56), Expect = 6e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 774 ccacaggctctgccaccacctccaccgaatgcacctatgggaatgccccctaggatcccg 833 |||||||||| ||| || |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 798 ccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatccca 857 Query: 834 ccaccaccaatgagcggtcttcaacctccaccccctccacctccgcttgcaaatggtcct 893 || ||||| | | ||| |||||||||||| || || || || ||||||||||| ||| Sbjct: 858 cccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacct 917 Query: 894 ccacgttcaataccacctccacctccttctggtggtccattggctaactttactcctgga 953 ||||| ||||| ||||| |||||| | |||||| || |||||||||| ||||||||| Sbjct: 918 ccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctgga 977 Query: 954 gcgcctcc 961 || ||||| Sbjct: 978 gcacctcc 985
>dbj|AK106060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F12, full insert sequence Length = 1228 Score = 829 bits (418), Expect = 0.0 Identities = 583/638 (91%) Strand = Plus / Plus Query: 36 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgccaccgcgcag 95 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 54 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccag 113 Query: 96 aatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatcgaccta 155 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 114 aatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctc 173 Query: 156 gccaaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctg 215 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 174 gccaaggacccctacttcatgcgcaaccacctcggcagctacgagtgcaagctgtgcctg 233 Query: 216 acgctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagacc 275 ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 234 acgctgcacaacaacgaggggaactacctggctcacacgcaggggaagcggcaccagacc 293 Query: 276 aacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagccaaac 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 294 aacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagcccaac 353 Query: 336 aagcgcaagctcgcgccccgcaagtctgttaagattggcagacctggatatacagtaact 395 ||| | ||| |||||||||||||||| ||||||||||| |||||||| ||| || ||| Sbjct: 354 aagagaaagttcgcgccccgcaagtccgttaagattggaagacctgggtatcaggtgact 413 Query: 396 aaacagtatgatcctgacacgaagcaacactcgtttctctttgagattgagtaccctgaa 455 || |||||||||||||||| |||||||||||| ||||| |||||||||| || |||||| Sbjct: 414 aagcagtatgatcctgacatgaagcaacactcatttctttttgagattggttatcctgaa 473 Query: 456 atcgaagataatagcaagccaaggcaccgtttcatggcatcatatgaacagaaaatccaa 515 || ||||| || |||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 474 attgaagaaaacagcaagccaaggcaccgtttcatggcatcatatgaacagaaagtcgaa 533 Query: 516 tcttgggataagaggtatcaatatctactttttgcagcggagccctatgaagtcattggc 575 ||||||||||| | |||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 534 tcttgggataaaaagtatcaatatctactttttgcagcagagccctatgaaattattggc 593 Query: 576 tttaagataccaagcacagagattgacaaatcgacagacaagtttttctcatactgggat 635 ||||||||||||||| ||||||| ||||| || |||| || || ||| || |||||| Sbjct: 594 tttaagataccaagcgcagagatcgacaagtcagcagataaattcttcaactattgggat 653 Query: 636 ccggacaagaaatcgtacattctgcaactatacttcaa 673 || ||||||||| ||||||||| |||||||||||||| Sbjct: 654 ccagacaagaaacagtacattctccaactatacttcaa 691 Score = 111 bits (56), Expect = 6e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 774 ccacaggctctgccaccacctccaccgaatgcacctatgggaatgccccctaggatcccg 833 |||||||||| ||| || |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 798 ccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatccca 857 Query: 834 ccaccaccaatgagcggtcttcaacctccaccccctccacctccgcttgcaaatggtcct 893 || ||||| | | ||| |||||||||||| || || || || ||||||||||| ||| Sbjct: 858 cccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacct 917 Query: 894 ccacgttcaataccacctccacctccttctggtggtccattggctaactttactcctgga 953 ||||| ||||| ||||| |||||| | |||||| || |||||||||| ||||||||| Sbjct: 918 ccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctgga 977 Query: 954 gcgcctcc 961 || ||||| Sbjct: 978 gcacctcc 985
>gb|AY105614.1| Zea mays PCO088922 mRNA sequence Length = 1195 Score = 722 bits (364), Expect = 0.0 Identities = 590/664 (88%), Gaps = 1/664 (0%) Strand = Plus / Plus Query: 23 gccaagccgagcagacgccatggatcgcgagtggggctccaagcccggcagcggcggcgc 82 ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 44 gccaaaccgagcgtacggcatggatcgcgagtggggctccaagcccggcagcggcggtgc 103 Query: 83 cgccaccgcgcagaatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcga 142 |||| |||| ||||||||||| || |||||||||||||| || |||||||| || ||||| Sbjct: 104 cgcctccgcccagaatgaggctattgaccggcgggagcgtctccgccgcctggccctcga 163 Query: 143 gacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggcagctacgagtg 202 ||| |||||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 164 gaccatcgacctcgccaaggatccctatttcatgcgcaaccacctcggcagctatgagtg 223 Query: 203 caagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcacacgcaggggaa 262 |||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 224 caagctgtgcctgacgctgcacaacaacgaggggaactacctagcccacacgcaagggaa 283 Query: 263 gcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgca 322 | ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 284 gaggcaccagaccaacctcgccaagcgcgccgcccgagaggccaaggatgcgcccgcgca 343 Query: 323 gccccagccaaacaagcgcaagctcgcgccccgcaagtctgttaagattggcagacctgg 382 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 344 gccccagcccaacaagcgcaagcttgccccccgcaagtctgttaagattggcagacccgg 403 Query: 383 atatacagtaactaaacagtatgatcctgacacgaagcaacactcgtttctctttgagat 442 |||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 404 gtataaagtaaccaaacaatatgatcctgagacgaagcaacactcgtttctctttgagat 463 Query: 443 tgagtaccctgaaatcgaagataatagcaagccaa-ggcaccgtttcatggcatcatatg 501 || ||||||||||| ||||||||| ||||||||| ||||||| |||||| ||||||||| Sbjct: 464 tggttaccctgaaattgaagataattgcaagccaagggcaccgcttcatgtcatcatatg 523 Query: 502 aacagaaaatccaatcttgggataagaggtatcaatatctactttttgcagcggagccct 561 |||||||| ||||| ||||||||||||||||||||| ||||||||||| || || |||| Sbjct: 524 aacagaaagtccaaagttgggataagaggtatcaatacctactttttgctgcagacccct 583 Query: 562 atgaagtcattggctttaagataccaagcacagagattgacaaatcgacagacaagtttt 621 ||||| |||||| || ||||||||||| ||||||||||||||||| | ||| || | Sbjct: 584 atgaaatcattgcattcaagataccaagtacagagattgacaaatcagcgagcaaattct 643 Query: 622 tctcatactgggatccggacaagaaatcgtacattctgcaactatacttcaagccaagac 681 |||| ||||||||||| |||||||| ||| | |||||| | |||||||||||||| | Sbjct: 644 tctcttactgggatcctgacaagaaggaatacctgctgcaattgtacttcaagccaaggc 703 Query: 682 cgcc 685 |||| Sbjct: 704 cgcc 707 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 803 tgcacctatgggaatgccccctaggatcccgccaccacc 841 ||||||||||||||||||||||||||| || |||||||| Sbjct: 837 tgcacctatgggaatgccccctaggattcctccaccacc 875 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 742 ctcctggtgctccaccaaggccaccg 767 |||||||||||||||||||||||||| Sbjct: 764 ctcctggtgctccaccaaggccaccg 789
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 283 bits (143), Expect = 7e-73 Identities = 164/171 (95%) Strand = Plus / Minus Query: 191 cagctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgca 250 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 8632831 cagctacgagtgcaagctgtgcctgacgctgcacaacaacgaggggaactacctggctca 8632772 Query: 251 cacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaagga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8632771 cacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaagga 8632712 Query: 311 cgcgcccgcgcagccccagccaaacaagcgcaagctcgcgccccgcaagtc 361 ||||||||||||||||||||| |||||| | ||| |||||||||||||||| Sbjct: 8632711 cgcgcccgcgcagccccagcccaacaagagaaagttcgcgccccgcaagtc 8632661 Score = 250 bits (126), Expect = 1e-62 Identities = 150/158 (94%) Strand = Plus / Minus Query: 36 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgccaccgcgcag 95 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 8633076 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccag 8633017 Query: 96 aatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatcgaccta 155 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 8633016 aatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctc 8632957 Query: 156 gccaaggacccctacttcatgcgaaaccatctcggcag 193 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 8632956 gccaaggacccctacttcatgcgcaaccacctcggcag 8632919 Score = 111 bits (56), Expect = 6e-21 Identities = 155/188 (82%) Strand = Plus / Minus Query: 774 ccacaggctctgccaccacctccaccgaatgcacctatgggaatgccccctaggatcccg 833 |||||||||| ||| || |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 8630770 ccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatccca 8630711 Query: 834 ccaccaccaatgagcggtcttcaacctccaccccctccacctccgcttgcaaatggtcct 893 || ||||| | | ||| |||||||||||| || || || || ||||||||||| ||| Sbjct: 8630710 cccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacct 8630651 Query: 894 ccacgttcaataccacctccacctccttctggtggtccattggctaactttactcctgga 953 ||||| ||||| ||||| |||||| | |||||| || |||||||||| ||||||||| Sbjct: 8630650 ccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctgga 8630591 Query: 954 gcgcctcc 961 || ||||| Sbjct: 8630590 gcacctcc 8630583 Score = 101 bits (51), Expect = 6e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 503 acagaaaatccaatcttgggataagaggtatcaatatctactttttgcagcggagcccta 562 ||||||| || ||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct: 8631227 acagaaagtcgaatcttgggataaaaagtatcaatatctactttttgcagcagagcccta 8631168 Query: 563 tgaagtcattggctttaag 581 |||| | |||||||||||| Sbjct: 8631167 tgaaattattggctttaag 8631149 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 429 tttctctttgagattgagtaccctgaaatcgaagataatagcaagccaaggcaccgtttc 488 ||||||||| |||||| || |||||||| ||||| || ||||||||||||||||||||| Sbjct: 8631409 tttctcttttagattggttatcctgaaattgaagaaaacagcaagccaaggcaccgtttc 8631350 Query: 489 atggcatcatatgaacag 506 |||||||||||||||||| Sbjct: 8631349 atggcatcatatgaacag 8631332 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 363 gttaagattggcagacctggatatacagtaactaaacagtatgatcctgacacgaagcaa 422 ||||||||||| |||||||| ||| || ||||| |||||||||||||||| ||||||| Sbjct: 8631968 gttaagattggaagacctgggtatcaggtgactaagcagtatgatcctgacatgaagcaa 8631909 Query: 423 cactcgtttctctttgag 440 ||||| ||||| |||||| Sbjct: 8631908 cactcatttctttttgag 8631891
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 283 bits (143), Expect = 7e-73 Identities = 164/171 (95%) Strand = Plus / Minus Query: 191 cagctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgca 250 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 115968 cagctacgagtgcaagctgtgcctgacgctgcacaacaacgaggggaactacctggctca 115909 Query: 251 cacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaagga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115908 cacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaagga 115849 Query: 311 cgcgcccgcgcagccccagccaaacaagcgcaagctcgcgccccgcaagtc 361 ||||||||||||||||||||| |||||| | ||| |||||||||||||||| Sbjct: 115848 cgcgcccgcgcagccccagcccaacaagagaaagttcgcgccccgcaagtc 115798 Score = 250 bits (126), Expect = 1e-62 Identities = 150/158 (94%) Strand = Plus / Minus Query: 36 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgccaccgcgcag 95 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 116213 gacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccag 116154 Query: 96 aatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatcgaccta 155 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 116153 aatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctc 116094 Query: 156 gccaaggacccctacttcatgcgaaaccatctcggcag 193 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 116093 gccaaggacccctacttcatgcgcaaccacctcggcag 116056 Score = 111 bits (56), Expect = 6e-21 Identities = 155/188 (82%) Strand = Plus / Minus Query: 774 ccacaggctctgccaccacctccaccgaatgcacctatgggaatgccccctaggatcccg 833 |||||||||| ||| || |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 113907 ccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatccca 113848 Query: 834 ccaccaccaatgagcggtcttcaacctccaccccctccacctccgcttgcaaatggtcct 893 || ||||| | | ||| |||||||||||| || || || || ||||||||||| ||| Sbjct: 113847 cccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacct 113788 Query: 894 ccacgttcaataccacctccacctccttctggtggtccattggctaactttactcctgga 953 ||||| ||||| ||||| |||||| | |||||| || |||||||||| ||||||||| Sbjct: 113787 ccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctgga 113728 Query: 954 gcgcctcc 961 || ||||| Sbjct: 113727 gcacctcc 113720 Score = 101 bits (51), Expect = 6e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 503 acagaaaatccaatcttgggataagaggtatcaatatctactttttgcagcggagcccta 562 ||||||| || ||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct: 114364 acagaaagtcgaatcttgggataaaaagtatcaatatctactttttgcagcagagcccta 114305 Query: 563 tgaagtcattggctttaag 581 |||| | |||||||||||| Sbjct: 114304 tgaaattattggctttaag 114286 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 429 tttctctttgagattgagtaccctgaaatcgaagataatagcaagccaaggcaccgtttc 488 ||||||||| |||||| || |||||||| ||||| || ||||||||||||||||||||| Sbjct: 114546 tttctcttttagattggttatcctgaaattgaagaaaacagcaagccaaggcaccgtttc 114487 Query: 489 atggcatcatatgaacag 506 |||||||||||||||||| Sbjct: 114486 atggcatcatatgaacag 114469 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 363 gttaagattggcagacctggatatacagtaactaaacagtatgatcctgacacgaagcaa 422 ||||||||||| |||||||| ||| || ||||| |||||||||||||||| ||||||| Sbjct: 115105 gttaagattggaagacctgggtatcaggtgactaagcagtatgatcctgacatgaagcaa 115046 Query: 423 cactcgtttctctttgag 440 ||||| ||||| |||||| Sbjct: 115045 cactcatttctttttgag 115028
>gb|AY596301.1| Chlamydomonas reinhardtii splicing factor mRNA, complete cds Length = 1964 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 90 gcgcagaatgaggccatcgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatc 149 |||||||||||||| || ||||| || |||||||| || ||||||||||| ||||||||| Sbjct: 261 gcgcagaatgaggcgattgaccgccgtgagcgccttcggcgcctcgcgctggagacgatc 320 Query: 150 gacctagccaaggacccctacttcatgcgaaacca 184 ||||| | |||||||||||||| ||||| ||||| Sbjct: 321 gacctcacgaaggacccctactttatgcgcaacca 355
>ref|XR_014623.1| PREDICTED: Macaca mulatta similar to Splicing factor 3A subunit 2 (Spliceosome-associated protein 62) (SAP 62) (SF3a66) (LOC721469), mRNA Length = 2568 Score = 91.7 bits (46), Expect = 6e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 201 tgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcacacgcagggg 260 |||||||||||||||||||| |||||||| ||||||| |||||| || || || |||||| Sbjct: 310 tgcaagctgtgcctgacgcttcacaacaatgaggggagctacctggcacatacccagggg 369 Query: 261 aagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaagga 310 ||| ||||||||||||||| ||| ||| |||||| ||||||||||| Sbjct: 370 aagaagcaccagaccaacctggcccggcgagccgccaaggaggccaagga 419
>emb|BX068895.1|CNS09PBN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC53BD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 154 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 213 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 214 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 273 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 274 gagggcagctacctgtcccacacgcaggg 302
>emb|BX053118.1|CNS09D5E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 430 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 183 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 242 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 243 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 302 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 303 gagggcagctacctgtcccacacgcaggg 331
>emb|BX052478.1|CNS09CNM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 990 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 145 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 204 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 205 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 264 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 265 gagggcagctacctgtcccacacgcaggg 293
>emb|BX052279.1|CNS09CI3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 966 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 128 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 187 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 188 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 247 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 248 gagggcagctacctgtcccacacgcaggg 276
>emb|BX049815.1|CNS09ALN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25DG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 135 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 194 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 195 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 254 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 255 gagggcagctacctgtcccacacgcaggg 283
>emb|BX045860.1|CNS097JS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC2AG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 963 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 176 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 235 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 236 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 295 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 296 gagggcagctacctgtcccacacgcaggg 324
>emb|BX041519.1|CNS09477 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12DH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 302 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 147 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 206 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 207 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 266 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 267 gagggcagctacctgtcccacacgcaggg 295
>emb|BX039355.1|CNS092J3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1AF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 978 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 144 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 203 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 204 tttatgaaaaaccatctcggctcgtacgagtgtaagctctgcctgacgctgcacaacaac 263 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 264 gagggcagctacctgtcccacacgcaggg 292
>ref|XM_001109075.1| PREDICTED: Macaca mulatta similar to splicing factor 3a, subunit 2, 66kDa (predicted) (LOC717516), partial mRNA Length = 119 Score = 87.7 bits (44), Expect = 9e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 201 tgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcacacgcagggg 260 |||||||||||||||||||| |||||||| ||||||| |||||| || || || |||||| Sbjct: 40 tgcaagctgtgcctgacgcttcacaacaatgaggggagctacctggcacatacccagggg 99 Query: 261 aagcggcaccagaccaacct 280 ||| ||||||||||||||| Sbjct: 100 aagaagcaccagaccaacct 119
>emb|BX052479.1|CNS09CNN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 846 Score = 87.7 bits (44), Expect = 9e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| |||||| || ||||| ||| ||||||||||||| Sbjct: 639 ctcgccctcgaaacgatcgacctgaacaaggatccgtactttatgaaaaaccatctcggc 580 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcac 251 |||||||| ||||| ||||||||||| |||||||||||||| | |||||| | ||| Sbjct: 579 tcgtacgagtgtaagctctgcctgacgctgcacaacaacgagggcagctacctgtcccac 520 Query: 252 acgcaggg 259 |||||||| Sbjct: 519 acgcaggg 512
>emb|BX052280.1|CNS09CI4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 960 Score = 87.7 bits (44), Expect = 9e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| |||||| || ||||| ||| ||||||||||||| Sbjct: 763 ctcgccctcgaaacgatcgacctgaacaaggatccgtactttatgaaaaaccatctcggc 704 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcac 251 |||||||| ||||| ||||||||||| |||||||||||||| | |||||| | ||| Sbjct: 703 tcgtacgagtgtaagctctgcctgacgctgcacaacaacgagggcagctacctgtcccac 644 Query: 252 acgcaggg 259 |||||||| Sbjct: 643 acgcaggg 636
>emb|BX064752.1|CNS09M4K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC48BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 476 Score = 83.8 bits (42), Expect = 1e-12 Identities = 105/126 (83%) Strand = Plus / Plus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| |||||| || ||||| ||| ||||||||||||| Sbjct: 166 ctcgccctcgaaacgatcgacctgaacaaggatccgtactttatgaaaaaccatctcggc 225 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcac 251 |||||||| ||||| ||||||||||| |||||||||||||| | |||||| | ||| Sbjct: 226 tcgtacgagtgtaagctctgcctgacgctgcacaacaacgagggcagctacctgtcccac 285 Query: 252 acgcag 257 |||||| Sbjct: 286 acgcag 291
>emb|BX042970.1|CNS095BI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC15BA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1014 Score = 81.8 bits (41), Expect = 6e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 167 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 226 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| ||||| || ||||| ||||||||||| ||||||||| Sbjct: 227 tttatgaaaaaccatctcggctcgtacgaatgtaagctctgcctgacgctgcacaacaac 286 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 287 gagggcagctacctgtcccacacgcaggg 315
>ref|XM_308101.2| Anopheles gambiae str. PEST ENSANGP00000003103 (ENSANGG00000002537), partial mRNA Length = 841 Score = 81.8 bits (41), Expect = 6e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 111 cggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggacccctac 170 ||||| ||||| || |||| ||||| ||||| ||||||||||| |||||| || ||| Sbjct: 173 cggcgcgagcggctccgccagctcgccctcgaaacgatcgacctgaacaaggatccgtac 232 Query: 171 ttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaacaac 230 || ||| ||||||||||||| ||||| || ||||| ||||||||||| ||||||||| Sbjct: 233 tttatgaaaaaccatctcggctcgtacgaatgtaagctctgcctgacgctgcacaacaac 292 Query: 231 gaggggaactacctcgcgcacacgcaggg 259 ||||| | |||||| | ||||||||||| Sbjct: 293 gagggcagctacctgtcccacacgcaggg 321
>emb|BX042971.1|CNS095BJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15BA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 786 Score = 79.8 bits (40), Expect = 2e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| |||||| || ||||| ||| ||||||||||||| Sbjct: 701 ctcgccctcgaaacgatcgacctgaacaaggatccgtactttatgaaaaaccatctcggc 642 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcac 251 ||||| || ||||| ||||||||||| |||||||||||||| | |||||| | ||| Sbjct: 641 tcgtacgaatgtaagctctgcctgacgctgcacaacaacgagggcagctacctttcccac 582 Query: 252 acgcaggg 259 |||||||| Sbjct: 581 acgcaggg 574
>ref|XM_001150681.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 5 (SF3A2), mRNA Length = 2733 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 541 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 600 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 601 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 660 Query: 278 cct 280 ||| Sbjct: 661 cct 663
>ref|XM_001150618.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 4 (SF3A2), mRNA Length = 2414 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 222 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 281 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 282 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 341 Query: 278 cct 280 ||| Sbjct: 342 cct 344
>ref|XM_512254.2| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 6 (SF3A2), mRNA Length = 2402 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 210 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 269 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 270 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 329 Query: 278 cct 280 ||| Sbjct: 330 cct 332
>ref|XM_001150500.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 3 (SF3A2), mRNA Length = 2764 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 572 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 631 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 632 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 691 Query: 278 cct 280 ||| Sbjct: 692 cct 694
>ref|XM_001150439.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 2 (SF3A2), mRNA Length = 2465 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 273 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 332 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 333 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 392 Query: 278 cct 280 ||| Sbjct: 393 cct 395
>ref|XM_001150166.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 2, transcript variant 1 (SF3A2), mRNA Length = 2453 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 261 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 320 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 321 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 380 Query: 278 cct 280 ||| Sbjct: 381 cct 383
>gb|DQ896781.1| Homo sapiens clone FLH199371.01L; RZPDo839B0981D SF3A2 mRNA, partial sequence Length = 1395 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 123 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 182 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 183 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 242 Query: 278 cct 280 ||| Sbjct: 243 cct 245
>gb|BC041763.1| Homo sapiens cDNA clone IMAGE:4157665, **** WARNING: chimeric clone **** Length = 3491 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 218 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 277 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 278 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 337 Query: 278 cct 280 ||| Sbjct: 338 cct 340
>ref|NM_007165.4| Homo sapiens splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA Length = 1678 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 245 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 304 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 305 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 364 Query: 278 cct 280 ||| Sbjct: 365 cct 367
>gb|BC004434.1| Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:3975 IMAGE:2820900), complete cds Length = 1648 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 215 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 274 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 275 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 334 Query: 278 cct 280 ||| Sbjct: 335 cct 337
>gb|BC015804.1| Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone IMAGE:3906524), partial cds Length = 1520 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 198 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 257 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 258 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 317 Query: 278 cct 280 ||| Sbjct: 318 cct 320
>emb|CR622079.1| full-length cDNA clone CS0DC012YK12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1560 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 212 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 271 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 272 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 331 Query: 278 cct 280 ||| Sbjct: 332 cct 334
>emb|CR619009.1| full-length cDNA clone CS0DF033YE05 of Fetal brain of Homo sapiens (human) Length = 1545 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 212 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 271 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 272 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 331 Query: 278 cct 280 ||| Sbjct: 332 cct 334
>emb|CR618734.1| full-length cDNA clone CS0DF006YA17 of Fetal brain of Homo sapiens (human) Length = 1602 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 229 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 288 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 289 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 348 Query: 278 cct 280 ||| Sbjct: 349 cct 351
>emb|CR618008.1| full-length cDNA clone CS0DF033YN12 of Fetal brain of Homo sapiens (human) Length = 1515 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 160 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 219 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 220 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 279 Query: 278 cct 280 ||| Sbjct: 280 cct 282
>emb|CR608171.1| full-length cDNA clone CS0DM009YH08 of Fetal liver of Homo sapiens (human) Length = 1575 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 227 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 286 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 287 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 346 Query: 278 cct 280 ||| Sbjct: 347 cct 349
>emb|CR600654.1| full-length cDNA clone CS0DB004YI19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1516 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 161 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 220 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 221 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 280 Query: 278 cct 280 ||| Sbjct: 281 cct 283
>emb|CR596440.1| full-length cDNA clone CS0DB004YD22 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1531 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 185 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 244 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 245 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 304 Query: 278 cct 280 ||| Sbjct: 305 cct 307
>emb|CR593881.1| full-length cDNA clone CS0DA001YC12 of Neuroblastoma of Homo sapiens (human) Length = 1566 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 195 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 254 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 255 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 314 Query: 278 cct 280 ||| Sbjct: 315 cct 317
>emb|CR593621.1| full-length cDNA clone CS0DF037YM13 of Fetal brain of Homo sapiens (human) Length = 1524 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 224 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 283 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 284 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 343 Query: 278 cct 280 ||| Sbjct: 344 cct 346
>emb|CR591148.1| full-length cDNA clone CS0DI041YI22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1558 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 212 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 271 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 272 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 331 Query: 278 cct 280 ||| Sbjct: 332 cct 334
>emb|CR591027.1| full-length cDNA clone CS0DH005YO13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1572 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 215 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 274 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 275 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 334 Query: 278 cct 280 ||| Sbjct: 335 cct 337
>gb|BC009903.2| Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:2362 IMAGE:2959124), complete cds Length = 1636 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 238 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 297 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 298 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 357 Query: 278 cct 280 ||| Sbjct: 358 cct 360
>gb|L21990.1|HUMSAP62X Human spliceosomal protein (SAP 62) gene, complete cds Length = 1395 Score = 77.8 bits (39), Expect = 9e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 ||||||||| ||||||||| ||||| || ||| ||| || ||||| || |||||||| Sbjct: 123 caaggacccgtacttcatgaagaaccacctgggctcctatgaatgcaaactctgcctgac 182 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggggaagcggcaccagaccaa 277 || |||||||| ||||||| |||||| || || |||||||||||| |||||||||||| Sbjct: 183 acttcacaacaatgaggggagctacctggcacatacgcaggggaagaagcaccagaccaa 242 Query: 278 cct 280 ||| Sbjct: 243 cct 245
>emb|BX068896.1|CNS09PBO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC53BD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 71.9 bits (36), Expect = 5e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| |||||| || ||||| ||| ||||||||||||| Sbjct: 795 ctcgccctcgaaacgatcgacctgcacaaggatccgtactttatgaaaaaccatctcggc 736 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcac 251 |||||||| ||||| | ||||||||| ||||||||||||| | |||||| | ||| Sbjct: 735 tcgtacgagtgtaagctctccctgacgctgaacaacaacgagggcagctacctgtcccac 676 Query: 252 acgcaggg 259 |||||||| Sbjct: 675 acgcaggg 668
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 67.9 bits (34), Expect = 8e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 |||||| || ||||||||| |||||||| ||| |||||||||||| || |||||||| Sbjct: 12806885 caaggatccgtacttcatgaagaaccatctgggctcctacgagtgcaaactctgcctgac 12806826 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggg 259 ||| |||||||||||||| | ||| | || ||||||||||| Sbjct: 12806825 gctgcacaacaacgagggcagctatttggcccacacgcaggg 12806784
>ref|NM_140346.1| Drosophila melanogaster CG10754-RA (CG10754), mRNA Length = 976 Score = 67.9 bits (34), Expect = 8e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 |||||| || ||||||||| |||||||| ||| |||||||||||| || |||||||| Sbjct: 219 caaggatccgtacttcatgaagaaccatctgggctcctacgagtgcaaactctgcctgac 278 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggg 259 ||| |||||||||||||| | ||| | || ||||||||||| Sbjct: 279 gctgcacaacaacgagggcagctatttggcccacacgcaggg 320
>gb|AY118970.1| Drosophila melanogaster LD47455 full insert cDNA Length = 1001 Score = 67.9 bits (34), Expect = 8e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 |||||| || ||||||||| |||||||| ||| |||||||||||| || |||||||| Sbjct: 219 caaggatccgtacttcatgaagaaccatctgggctcctacgagtgcaaactctgcctgac 278 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggg 259 ||| |||||||||||||| | ||| | || ||||||||||| Sbjct: 279 gctgcacaacaacgagggcagctatttggcccacacgcaggg 320
>gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175679 Score = 67.9 bits (34), Expect = 8e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 |||||| || ||||||||| |||||||| ||| |||||||||||| || |||||||| Sbjct: 20145 caaggatccgtacttcatgaagaaccatctgggctcctacgagtgcaaactctgcctgac 20086 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggg 259 ||| |||||||||||||| | ||| | || ||||||||||| Sbjct: 20085 gctgcacaacaacgagggcagctatttggcccacacgcaggg 20044
>gb|AC023677.4| Drosophila melanogaster 3L BAC RP98-20I1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 143136 Score = 67.9 bits (34), Expect = 8e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 158 caaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgac 217 |||||| || ||||||||| |||||||| ||| |||||||||||| || |||||||| Sbjct: 133618 caaggatccgtacttcatgaagaaccatctgggctcctacgagtgcaaactctgcctgac 133559 Query: 218 gctccacaacaacgaggggaactacctcgcgcacacgcaggg 259 ||| |||||||||||||| | ||| | || ||||||||||| Sbjct: 133558 gctgcacaacaacgagggcagctatttggcccacacgcaggg 133517
>ref|XM_849923.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 2, 66kDa (predicted) (LOC612188), mRNA Length = 1366 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcacacgcag 257 |||||||||||||||||||| || |||||||||||||| | ||||| ||||| || || Sbjct: 209 gagtgcaagctgtgcctgaccctgcacaacaacgagggcagttaccttgcgcatacccaa 268 Query: 258 gggaagcggcaccagaccaac 278 |||||| ||| ||||||||| Sbjct: 269 gggaagaagcatcagaccaac 289
>ref|XM_968468.1| PREDICTED: Tribolium castaneum similar to CG10754-PA (LOC662368), mRNA Length = 816 Score = 61.9 bits (31), Expect = 5e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 159 aaggacccctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacg 218 ||||||||||| || ||| ||||||| | ||| ||||||||||||||| || || || Sbjct: 124 aaggacccctattttatgaaaaaccatttgggctcctacgagtgcaagctatgtctcaca 183 Query: 219 ctccacaacaacgaggggaactacctcgcgcacac 253 || |||||||||||||| | ||||||||| ||||| Sbjct: 184 ctacacaacaacgagggcagctacctcgcccacac 218
>emb|BX039356.1|CNS092J4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC1AF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 805 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttcatgcgaaaccatctcggc 191 ||||| ||||| ||||||||||| | |||||| || ||||| ||| |||||||||| || Sbjct: 639 ctcgccctcgaaacgatcgacctggacaaggatccgtactttatgaaaaaccatctccgc 580 Query: 192 agctacgagtgcaagctgtgcctgacgctccacaacaacgagg 234 |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 579 tcgtacgagtgtaagttctgcctgacgctgaacaacaacgagg 537
>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence Length = 44255 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggggaactacctcgcgcacacgcag 257 |||||||| ||||||||||| |||||||| ||||| || | |||| | |||||||||||| Sbjct: 5675 gagtgcaaactgtgcctgacactccacaataacgaaggcagctacttggcgcacacgcag 5734 Query: 258 gg 259 || Sbjct: 5735 gg 5736
>ref|XM_001213055.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_03877) mRNA, complete cds Length = 717 Score = 58.0 bits (29), Expect = 8e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 107 cgaccggcgggagcgcctgcgccgcctcgcgctcgagacgatcgacctagccaaggaccc 166 ||||||||| ||||| || ||| |||||||| ||||| ||||| || | ||||||||| Sbjct: 72 cgaccggcgcgagcggcttcgcaagctcgcgctggagacaatcgatctcgacaaggaccc 131 Query: 167 ctacttcatgcgaaaccatctcggcagctacgagtgcaagctgtgcctgacgctccacaa 226 |||||| | |||||| | ||||||| ||||||| ||||||||||||| | ||| | Sbjct: 132 gtacttcttcaagaaccatgtaggcagcttcgagtgccggctgtgcctgacggtgcacca 191 Query: 227 caacgaggggaactacctcgcgcacacgcaggg 259 ||||| ||| ||||| |||||||||||||| Sbjct: 192 gaacgacgggtcgtacctggcgcacacgcaggg 224
>ref|NM_128819.2| Arabidopsis thaliana nucleic acid binding / zinc ion binding (AT2G32600) mRNA, complete cds Length = 1202 Score = 54.0 bits (27), Expect = 0.001 Identities = 132/167 (79%) Strand = Plus / Plus Query: 471 aagccaaggcaccgtttcatggcatcatatgaacagaaaatccaatcttgggataagagg 530 |||||||| || ||||||||| |||| ||||| |||||| | ||| ||| || ||||| Sbjct: 564 aagccaagacatcgtttcatgtcatcttatgagcagaaagttcaaccttatgacaagagc 623 Query: 531 tatcaatatctactttttgcagcggagccctatgaagtcattggctttaagataccaagc 590 |||||||| || || |||||||| || || |||||| |||| | || ||| | || ||| Sbjct: 624 tatcaataccttctatttgcagccgaaccatatgaaatcatagctttcaaggttcctagc 683 Query: 591 acagagattgacaaatcgacagacaagtttttctcatactgggatcc 637 |||||| |||| ||||| || ||||||||||| |||||||||| Sbjct: 684 acagaggttgataaatcaaccccaaagtttttctctcactgggatcc 730
>gb|AY098956.1| Arabidopsis thaliana At2g32600/T26B15.16 mRNA, complete cds Length = 834 Score = 54.0 bits (27), Expect = 0.001 Identities = 132/167 (79%) Strand = Plus / Plus Query: 471 aagccaaggcaccgtttcatggcatcatatgaacagaaaatccaatcttgggataagagg 530 |||||||| || ||||||||| |||| ||||| |||||| | ||| ||| || ||||| Sbjct: 430 aagccaagacatcgtttcatgtcatcttatgagcagaaagttcaaccttatgacaagagc 489 Query: 531 tatcaatatctactttttgcagcggagccctatgaagtcattggctttaagataccaagc 590 |||||||| || || |||||||| || || |||||| |||| | || ||| | || ||| Sbjct: 490 tatcaataccttctatttgcagccgaaccatatgaaatcatagctttcaaggttcctagc 549 Query: 591 acagagattgacaaatcgacagacaagtttttctcatactgggatcc 637 |||||| |||| ||||| || ||||||||||| |||||||||| Sbjct: 550 acagaggttgataaatcaaccccaaagtttttctctcactgggatcc 596
>gb|AY052725.1| Arabidopsis thaliana At2g32600/T26B15.16 mRNA, complete cds Length = 1163 Score = 54.0 bits (27), Expect = 0.001 Identities = 132/167 (79%) Strand = Plus / Plus Query: 471 aagccaaggcaccgtttcatggcatcatatgaacagaaaatccaatcttgggataagagg 530 |||||||| || ||||||||| |||| ||||| |||||| | ||| ||| || ||||| Sbjct: 525 aagccaagacatcgtttcatgtcatcttatgagcagaaagttcaaccttatgacaagagc 584 Query: 531 tatcaatatctactttttgcagcggagccctatgaagtcattggctttaagataccaagc 590 |||||||| || || |||||||| || || |||||| |||| | || ||| | || ||| Sbjct: 585 tatcaataccttctatttgcagccgaaccatatgaaatcatagctttcaaggttcctagc 644 Query: 591 acagagattgacaaatcgacagacaagtttttctcatactgggatcc 637 |||||| |||| ||||| || ||||||||||| |||||||||| Sbjct: 645 acagaggttgataaatcaaccccaaagtttttctctcactgggatcc 691
>emb|BX820766.1|CNS0A9M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1126 Score = 54.0 bits (27), Expect = 0.001 Identities = 132/167 (79%) Strand = Plus / Plus Query: 471 aagccaaggcaccgtttcatggcatcatatgaacagaaaatccaatcttgggataagagg 530 |||||||| || ||||||||| |||| ||||| |||||| | ||| ||| || ||||| Sbjct: 549 aagccaagacatcgtttcatgtcatcttatgagcagaaagttcaaccttatgacaagagc 608 Query: 531 tatcaatatctactttttgcagcggagccctatgaagtcattggctttaagataccaagc 590 |||||||| || || |||||||| || || |||||| |||| | || ||| | || ||| Sbjct: 609 tatcaataccttctatttgcagccgaaccatatgaaatcatagctttcaaggttcctagc 668 Query: 591 acagagattgacaaatcgacagacaagtttttctcatactgggatcc 637 |||||| |||| ||||| || ||||||||||| |||||||||| Sbjct: 669 acagaggttgataaatcaaccccaaagtttttctctcactgggatcc 715
>ref|XM_001223646.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_04433) mRNA, complete cds Length = 753 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 239 ctacctcgcgcacacgcaggggaagcggcaccagaccaacct 280 ||||||||||||||| ||||| ||| ||||||||||||||| Sbjct: 204 ctacctcgcgcacacccagggcaagaagcaccagaccaacct 245
>gb|AC138127.1| Homo sapiens chromosome 19 clone LLNLR-281G7, complete sequence Length = 40616 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 232 aggggaactacctcgcgcacacgcaggggaagcggcaccagaccaacct 280 |||||| |||||| || || |||||||||||| ||||||||||||||| Sbjct: 19526 aggggagctacctggcacatacgcaggggaagaagcaccagaccaacct 19574
>gb|AY111802.1| Zea mays CL28354_-2 mRNA sequence Length = 560 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 657 ctgcaactatacttcaagccaagaccgcc 685 |||||||| |||||||||||||||||||| Sbjct: 60 ctgcaactgtacttcaagccaagaccgcc 88 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 743 tcctggtgctccaccaaggccaccg 767 ||||||||||||| ||||||||||| Sbjct: 146 tcctggtgctccaacaaggccaccg 170
>gb|AC005263.1|AC005263 Homo sapiens chromosome 19, cosmid F20489, complete sequence Length = 35737 Score = 50.1 bits (25), Expect = 0.019 Identities = 43/49 (87%) Strand = Plus / Plus Query: 232 aggggaactacctcgcgcacacgcaggggaagcggcaccagaccaacct 280 |||||| |||||| || || |||||||||||| ||||||||||||||| Sbjct: 25622 aggggagctacctggcacatacgcaggggaagaagcaccagaccaacct 25670
>ref|NM_001059154.1| Oryza sativa (japonica cultivar-group) Os04g0385700 (Os04g0385700) mRNA, complete cds Length = 2627 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 905 accacctccacctccttctggtg 927 ||||||||||||||||||||||| Sbjct: 2070 accacctccacctccttctggtg 2092
>emb|CR848737.8| Zebrafish DNA sequence from clone DKEY-3K24 in linkage group 7, complete sequence Length = 158396 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1116 tttaagcagattaaattatttaa 1138 ||||||||||||||||||||||| Sbjct: 113227 tttaagcagattaaattatttaa 113249
>ref|NM_001004397.1| Gallus gallus splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA gb|AY701055.1| Gallus gallus splicing factor 3a subunit 2 (SF3A2) mRNA, complete cds Length = 1127 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Plus Query: 201 tgcaagctgtgcctgacgctccacaacaacgaggg 235 |||||||| |||||||||||||| ||||| ||||| Sbjct: 200 tgcaagctttgcctgacgctccataacaatgaggg 234
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccg 90 ||||||||||||||||||||||| Sbjct: 5766761 cggcagcggcggcgccgccaccg 5766783 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ccaagcccggcagcggcggcg 81 ||||||||||||||||||||| Sbjct: 20755952 ccaagcccggcagcggcggcg 20755972
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 905 accacctccacctccttctggtg 927 ||||||||||||||||||||||| Sbjct: 18946826 accacctccacctccttctggtg 18946848
>emb|AL732434.20| Human DNA sequence from clone XXyac-14BB7 on chromosome 10 Contains the 3' end of a novel gene, complete sequence Length = 62347 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 501 gaacagaaaatccaatcttggga 523 ||||||||||||||||||||||| Sbjct: 20544 gaacagaaaatccaatcttggga 20522
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 905 accacctccacctccttctggtg 927 ||||||||||||||||||||||| Sbjct: 38750 accacctccacctccttctggtg 38772
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccg 90 ||||||||||||||||||||||| Sbjct: 62966 cggcagcggcggcgccgccaccg 62988
>dbj|AK121107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072J20, full insert sequence Length = 2760 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 905 accacctccacctccttctggtg 927 ||||||||||||||||||||||| Sbjct: 2201 accacctccacctccttctggtg 2223
>emb|BX931312.2| Gallus gallus finished cDNA, clone ChEST652g6 Length = 1066 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Plus Query: 201 tgcaagctgtgcctgacgctccacaacaacgaggg 235 |||||||| |||||||||||||| ||||| ||||| Sbjct: 253 tgcaagctttgcctgacgctccataacaatgaggg 287
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 288 cgtgccgcccgcgaggccaaggacgc 313 |||||||||||| ||||||||||||| Sbjct: 1594116 cgtgccgcccgccaggccaaggacgc 1594141
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 cagcggcggcgccgccaccgcg 92 |||||||||||||||||||||| Sbjct: 33765 cagcggcggcgccgccaccgcg 33744
>gb|AY576485.1| Neurospora crassa RCM-1 (rcm-1) mRNA, complete cds Length = 2754 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 858 cctccaccccctccacctccgc 879 |||||||||||||||||||||| Sbjct: 1630 cctccaccccctccacctccgc 1651
>gb|AC140268.2| Mus musculus BAC clone RP23-321K4 from chromosome 7, complete sequence Length = 193572 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 717 actgttccaaatggaacaggag 738 |||||||||||||||||||||| Sbjct: 165254 actgttccaaatggaacaggag 165233
>gb|AC122020.3| Mus musculus BAC clone RP24-365G17 from chromosome 1, complete sequence Length = 165592 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 tttaagcagattaaattattta 1137 |||||||||||||||||||||| Sbjct: 48074 tttaagcagattaaattattta 48053
>dbj|AB224610.1| Aspergillus oryzae cDNA, contig sequence: AoEST1459 Length = 934 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttc 173 ||||| || |||||||||||||| | ||||||||| |||||| Sbjct: 97 ctcgctcttgagacgatcgacctggacaaggacccgtacttc 138
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Minus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttc 173 ||||| || |||||||||||||| | ||||||||| |||||| Sbjct: 2773721 ctcgctcttgagacgatcgacctggacaaggacccgtacttc 2773680
>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence Length = 220568 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 722 tccaaatggaacaggaggccct 743 |||||||||||||||||||||| Sbjct: 92740 tccaaatggaacaggaggccct 92761
>ref|XM_746549.1| Aspergillus fumigatus Af293 splicing factor 3a subunit 2 (Afu4g11880) partial mRNA Length = 717 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 132 ctcgcgctcgagacgatcgacctagccaaggacccctacttc 173 ||||| |||||||| |||||||| | ||| |||||||||||| Sbjct: 97 ctcgccctcgagacaatcgacctcgacaaagacccctacttc 138
>emb|CR690826.2|CNS0FVZQ Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 233 gagtgcaagctgtgcttaacgcttcataacaacgaggg 270
>emb|CR690032.2|CNS0FVDO Tetraodon nigroviridis full-length cDNA Length = 1070 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 202 gagtgcaagctgtgcttaacgcttcataacaacgaggg 239
>emb|CR689725.2|CNS0FV55 Tetraodon nigroviridis full-length cDNA Length = 1126 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 236 gagtgcaagctgtgcttaacgcttcataacaacgaggg 273
>emb|CR681323.2|CNS0FONR Tetraodon nigroviridis full-length cDNA Length = 1126 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 235 gagtgcaagctgtgcttaacgcttcataacaacgaggg 272
>emb|CR671843.2|CNS0FHD5 Tetraodon nigroviridis full-length cDNA Length = 1189 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 233 gagtgcaagctgtgcttaacgcttcataacaacgaggg 270
>emb|CR652544.2|CNS0F2H2 Tetraodon nigroviridis full-length cDNA Length = 1125 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 198 gagtgcaagctgtgcctgacgctccacaacaacgaggg 235 ||||||||||||||| | ||||| || ||||||||||| Sbjct: 235 gagtgcaagctgtgcttaacgcttcataacaacgaggg 272
>ref|XM_958223.1| Neurospora crassa OR74A hypothetical protein (NCU06842.1) partial mRNA Length = 2754 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 858 cctccaccccctccacctccgc 879 |||||||||||||||||||||| Sbjct: 1630 cctccaccccctccacctccgc 1651
>emb|BX284750.1|NCB17B1 Neurospora crassa DNA linkage group II BAC clone B17B1 Length = 102737 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 858 cctccaccccctccacctccgc 879 |||||||||||||||||||||| Sbjct: 46817 cctccaccccctccacctccgc 46838
>emb|CT834920.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA212L12, full insert sequence Length = 656 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccgcg 92 |||| |||||||||||||||||||| Sbjct: 331 cggcggcggcggcgccgccaccgcg 355
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 agcgcctgcgccgcctcgcgc 138 ||||||||||||||||||||| Sbjct: 514231 agcgcctgcgccgcctcgcgc 514211
>ref|NM_001070316.1| Oryza sativa (japonica cultivar-group) Os09g0535500 (Os09g0535500) mRNA, complete cds Length = 892 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ccaagcccggcagcggcggcg 81 ||||||||||||||||||||| Sbjct: 92 ccaagcccggcagcggcggcg 72
>ref|NM_001068381.1| Oryza sativa (japonica cultivar-group) Os08g0428100 (Os08g0428100) mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agcggcggcgccgccaccgcg 92 ||||||||||||||||||||| Sbjct: 218 agcggcggcgccgccaccgcg 198
>gb|BT027941.1| Gasterosteus aculeatus clone CNB75-E06 mRNA sequence Length = 1296 Score = 42.1 bits (21), Expect = 4.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 357 aagtctgttaagattggcagacctggatatacagtaactaaacag 401 |||| |||||| |||||| |||| ||||| | ||||||||||||| Sbjct: 429 aagtttgttaaaattggccgaccaggatacaaagtaactaaacag 473
>ref|XM_396368.3| PREDICTED: Apis mellifera similar to ETS-like protein pointed, isoform P1 (D-ETS-2) (LOC412916), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 861 ccaccccctccacctccgctt 881 ||||||||||||||||||||| Sbjct: 920 ccaccccctccacctccgctt 900
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 agcgcctgcgccgcctcgcgc 138 ||||||||||||||||||||| Sbjct: 499480 agcgcctgcgccgcctcgcgc 499460
>gb|CP000377.1| Silicibacter sp. TM1040, complete genome Length = 3200938 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 cagtatgatcctgacacgaag 419 ||||||||||||||||||||| Sbjct: 1744854 cagtatgatcctgacacgaag 1744874
>emb|BX323850.16| Zebrafish DNA sequence from clone DKEY-156A5 in linkage group 11, complete sequence Length = 156989 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1114 actttaagcagattaaattatttaa 1138 ||||||| ||||||||||||||||| Sbjct: 136341 actttaatcagattaaattatttaa 136365
>ref|XM_367002.1| Magnaporthe grisea 70-15 chromosome VII predicted protein (MG03078.4) partial mRNA Length = 960 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 ccaacctcgccaagcgtgccg 294 ||||||||||||||||||||| Sbjct: 695 ccaacctcgccaagcgtgccg 715
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 acctccaccccctccacctcc 877 ||||||||||||||||||||| Sbjct: 1339037 acctccaccccctccacctcc 1339057
>ref|XM_454185.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E05269g predicted mRNA Length = 2628 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1044 ttgaacacttgctttatccaaacca 1068 |||||||||||||||| |||||||| Sbjct: 1278 ttgaacacttgctttacccaaacca 1254
>gb|BC045133.1| Xenopus laevis hypothetical protein MGC53501, mRNA (cDNA clone MGC:53501 IMAGE:5572499), complete cds Length = 2300 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 853 ttcaacctccaccccctccacctcc 877 ||||||||||||| ||||||||||| Sbjct: 1297 ttcaacctccaccacctccacctcc 1321
>gb|AC005293.1| Homo sapiens 12p13.3 PAC RPCI5-977L1 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 143334 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gaacagaaaatccaatcttgg 521 ||||||||||||||||||||| Sbjct: 74114 gaacagaaaatccaatcttgg 74134
>dbj|AK147545.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1072G19 product:bromodomain containing 4, full insert sequence Length = 5956 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 855 caacctccaccccctccacctccgc 879 |||||||||||||| |||||||||| Sbjct: 2606 caacctccacccccaccacctccgc 2630
>emb|CT027854.1| Xenopus tropicalis finished cDNA, clone TEgg059m22 Length = 2643 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 acctccaccccctccacctcc 877 ||||||||||||||||||||| Sbjct: 249 acctccaccccctccacctcc 269
>ref|NM_020508.2| Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA gb|AF461395.1| Mus musculus bromodomain-containing protein BRD4 long variant (Brd4) mRNA, complete cds Length = 6000 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 855 caacctccaccccctccacctccgc 879 |||||||||||||| |||||||||| Sbjct: 2570 caacctccacccccaccacctccgc 2594
>gb|AC098936.2| Homo sapiens chromosome 1 clone RP11-576D8, complete sequence Length = 151324 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 aggtatcaatatctactttttgcag 552 ||||||||||||| ||||||||||| Sbjct: 395 aggtatcaatatccactttttgcag 419
>gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, complete sequence Length = 179414 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 aggtatcaatatctactttttgcag 552 ||||||||||||| ||||||||||| Sbjct: 109642 aggtatcaatatccactttttgcag 109666
>gb|AC011197.12| Homo sapiens chromosome 10 clone RP11-322C8, complete sequence Length = 162784 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gataccaagcacagagattga 601 ||||||||||||||||||||| Sbjct: 29205 gataccaagcacagagattga 29185
>gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, complete sequence Length = 191840 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1101 gaaattttactgtactttaag 1121 ||||||||||||||||||||| Sbjct: 154102 gaaattttactgtactttaag 154082
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agcggcggcgccgccaccgcg 92 ||||||||||||||||||||| Sbjct: 20584481 agcggcggcgccgccaccgcg 20584461
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgggagcgcctgcgccgcctc 134 ||||||||||||||||||||| Sbjct: 26726775 cgggagcgcctgcgccgcctc 26726755
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccgcg 92 |||| |||||||||||||||||||| Sbjct: 21146864 cggcggcggcggcgccgccaccgcg 21146888
>emb|CR634715.1|CNS0EOPT Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 42.1 bits (21), Expect = 4.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 195 tacgagtgcaagctgtgcctgacgctccacaacaacgaggg 235 |||||||||||||||||| | || || || ||||||||||| Sbjct: 224 tacgagtgcaagctgtgcttaacacttcataacaacgaggg 264
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 900 tcaataccacctccacctcct 920 ||||||||||||||||||||| Sbjct: 50706 tcaataccacctccacctcct 50726
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccgcg 92 |||| |||||||||||||||||||| Sbjct: 114409 cggcggcggcggcgccgccaccgcg 114433
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cggcagcggcggcgccgccaccgcg 92 |||| |||||||||||||||||||| Sbjct: 44373 cggcggcggcggcgccgccaccgcg 44397
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1044 ttgaacacttgctttatccaaacca 1068 |||||||||||||||| |||||||| Sbjct: 477823 ttgaacacttgctttacccaaacca 477799
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aggacgcgcccgcgcagcccc 327 ||||||||||||||||||||| Sbjct: 173858 aggacgcgcccgcgcagcccc 173838
>emb|CR352237.9| Zebrafish DNA sequence from clone CH211-13I11 in linkage group 11, complete sequence Length = 193648 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1114 actttaagcagattaaattatttaa 1138 ||||||| ||||||||||||||||| Sbjct: 97923 actttaatcagattaaattatttaa 97947
>gb|AF137396.2|AF137396 Homo sapiens ubiquilin 3, HOR 5'Beta14, HOR5'Beta13, HOR5'Beta12, and HOR5'Beta11 genes, complete cds; HOR 5'Beta10 and HOR5'Beta9 pseudogenes, complete sequence; HOR5'Beta8 and HOR5'Beta7 genes, complete cds; CHR11ORF1 and amphiphysin pseudogenes, complete sequence; HOR5'Beta6 and HOR5'Beta5 genes, complete cds; HOR5'Beta4 pseudogene, complete sequence; HOR 5'Beta3 genes, complete cds; HOR5'Beta2 pseudogene, complete sequence; and HOR 5'Beta1 gene, complete cds Length = 219955 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccaaggacccctacttcatg 176 ||||||||||||||||||||| Sbjct: 4 gccaaggacccctacttcatg 24
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ccaagcccggcagcggcggcg 81 ||||||||||||||||||||| Sbjct: 30981 ccaagcccggcagcggcggcg 31001
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgggagcgcctgcgccgcctc 134 ||||||||||||||||||||| Sbjct: 73632 cgggagcgcctgcgccgcctc 73612
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agcggcggcgccgccaccgcg 92 ||||||||||||||||||||| Sbjct: 88442 agcggcggcgccgccaccgcg 88422
>gb|AF273217.1|AF273217 Mus musculus cell proliferation related protein CAP (Cap) mRNA, complete cds Length = 5281 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 855 caacctccaccccctccacctccgc 879 |||||||||||||| |||||||||| Sbjct: 2509 caacctccacccccaccacctccgc 2533
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 agcggcggcgccgccaccgcg 92 ||||||||||||||||||||| Sbjct: 58853 agcggcggcgccgccaccgcg 58833
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgggagcgcctgcgccgcctc 134 ||||||||||||||||||||| Sbjct: 144379 cgggagcgcctgcgccgcctc 144359
>ref|XM_570077.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND04880) partial mRNA Length = 2201 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 acctccaccccctccacctcc 877 ||||||||||||||||||||| Sbjct: 1891 acctccaccccctccacctcc 1911
>dbj|AK108282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D02, full insert sequence Length = 892 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ccaagcccggcagcggcggcg 81 ||||||||||||||||||||| Sbjct: 92 ccaagcccggcagcggcggcg 72
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 gagcgcctgcgccgcctcgcgctcg 141 |||| |||||||||||||||||||| Sbjct: 2793242 gagcacctgcgccgcctcgcgctcg 2793218
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gcggcggcgccgccaccgcgc 93 ||||||||||||||||||||| Sbjct: 12015 gcggcggcgccgccaccgcgc 12035
>gb|BC066469.1| Danio rerio splicing factor 3a, subunit 2, mRNA (cDNA clone MGC:77448 IMAGE:6971331), complete cds Length = 1095 Score = 42.1 bits (21), Expect = 4.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 357 aagtctgttaagattggcagacctggatatacagtaactaaacag 401 |||| ||| ||||| |||||||| || |||| ||||||||||||| Sbjct: 370 aagtttgtcaagatcggcagacccggttataaagtaactaaacag 414
>emb|CT033755.6| Mouse DNA sequence from clone RP23-34A10 on chromosome 17, complete sequence Length = 91439 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 855 caacctccaccccctccacctccgc 879 |||||||||||||| |||||||||| Sbjct: 83534 caacctccacccccaccacctccgc 83510
>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8 Length = 159490 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1180 tctctttgtaacttcactttt 1200 ||||||||||||||||||||| Sbjct: 125103 tctctttgtaacttcactttt 125123 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 201,789,603 Number of extensions: 11342321 Number of successful extensions: 266983 Number of sequences better than 10.0: 137 Number of HSP's gapped: 266972 Number of HSP's successfully gapped: 157 Length of query: 1252 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1229 Effective length of database: 18,503,978,556 Effective search space: 22741389645324 Effective search space used: 22741389645324 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
